Introduction
Input Data Format
Uploading and Processing
Obtaining an account
Upload Form
Data uploading
Processing Datasets
Project Management
Browsing Pathways
Promoter analysis
Analyzing Dataset
Changed Pathways
GO Enrichment
Functional classification
Searching
Adding New Platforms
Update Pathways and Genes
Contacts
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Gene functional classification
This tool classifies a list of interesting genes into different functional categories based on
their GO annotations. The functional catalogue is based on the Plant GO Slim, a cut-down version of the plant GO ontologies containing a
subset of the terms in the whole GO. These GO slims give a broad overview of the ontology
content without the detail of the specific fine grained terms.
From a list of up- and/or down-regulated genes under a specific condition, the tool outputs
the number of genes in each GO slim category with each number linked to the full list of
genes belonging to the corresponding category. A clickable bar graph is also provided. It
is worth noting that one gene could be assigned to several different GO slims, so the sum
of genes assigned to each category could be more than the number of total input genes.
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