1. Select plant species

Amborella trichopoda Arabidopsis lyrata Arabidopsis thaliana
Carica papaya Chlamydomonas reinhardtii Citrus sinensis
Cycas rumphii Ginkgo biloba Glycine max
Mimulus guttatus Musa acuminata Nicotiana tabacum
Oryza rufipogon Oryza sativa L. ssp. indica Oryza sativa L. ssp. japonica
Panicum virgatum Physcomitrella patens Populus trichocarpa
Setaria italica Solanum lycopersicum Solanum tuberosum
Sorghum bicolor Vitis vinifera Volvox carteri
Zea mays

2. Select genome or transcriptome as reference

genome transcriptome

3. Select sample files

Amborella trichopoda -- Leaves
Amborella trichopoda -- Leaves
Arabidopsis lyrata -- flowers-stage1-12 rep1
Arabidopsis lyrata -- flowers-stage1-12 rep2
Arabidopsis lyrata -- vegetative-rosette-leaves
Arabidopsis lyrata -- flowers-stage1-12 rep1
Arabidopsis lyrata -- flowers-stage1-12 rep2
Arabidopsis lyrata -- vegetative-rosette-leaves
Arabidopsis thaliana -- aerial-bolting 21days
Arabidopsis thaliana -- aerial-bolting 21days
Carica papaya -- Leaves
Carica papaya -- Flower
Carica papaya -- Leaves inoculated with ringspot virus
Carica papaya -- Leaves
Carica papaya -- Flower
Carica papaya -- Leaves inoculated with ringspot virus
Chlamydomonas reinhardtii -- Control
Chlamydomonas reinhardtii -- Phosphate starvation
Chlamydomonas reinhardtii -- Sulfate starvation
Chlamydomonas reinhardtii -- Control
Chlamydomonas reinhardtii -- Phosphate starvation
Chlamydomonas reinhardtii -- Sulfate starvation
Citrus sinensis -- Leaves
Citrus sinensis -- Flower
Citrus sinensis -- Fruit
Citrus sinensis -- Leaves
Citrus sinensis -- Flower
Citrus sinensis -- Fruit
Cycas rumphii -- Leaves
Cycas rumphii -- Female cone
Cycas rumphii -- Male cone
Ginkgo biloba -- Leaves
Ginkgo biloba -- Female cone
Ginkgo biloba -- Male cone
Glycine max -- Mixed organs
Glycine max -- Mixed organs
Mimulus guttatus -- Leaves
Mimulus guttatus -- Flower
Mimulus guttatus -- Root
Mimulus guttatus -- Leaves
Mimulus guttatus -- Flower
Mimulus guttatus -- Root
Musa acuminata -- Leaves
Musa acuminata -- Flower
Musa acuminata -- Fruit
Musa acuminata -- Leaves
Musa acuminata -- Flower
Musa acuminata -- Fruit
Nicotiana tabacum -- Leaves
Nicotiana tabacum -- Flower
Nicotiana tabacum -- Pod
Nicotiana tabacum -- Leaves
Nicotiana tabacum -- Flower
Nicotiana tabacum -- Pod
Oryza rufipogon -- Leaves
Oryza rufipogon -- Root
Oryza rufipogon -- Seed
Oryza sativa L. ssp. indica -- 93-11 shoot
Oryza sativa L. ssp. indica -- 93-11 shoot
Oryza sativa L. ssp. japonica -- Nipponbare shoot
Oryza sativa L. ssp. japonica -- Nipponbare shoot
Panicum virgatum -- Leaves
Panicum virgatum -- Flower
Panicum virgatum -- Drought-treated leaves
Panicum virgatum -- Leaves
Panicum virgatum -- Flower
Panicum virgatum -- Drought-treated leaves
Physcomitrella patens -- Protonemata
Physcomitrella patens -- Protonemata YoungGametophores
Physcomitrella patens -- GamteophoresSporophytes
Physcomitrella patens -- Protonemata
Physcomitrella patens -- Protonemata YoungGametophores
Physcomitrella patens -- GamteophoresSporophytes
Populus trichocarpa -- Leaves
Populus trichocarpa -- Xylem
Populus trichocarpa -- Mechanically treated xylem
Populus trichocarpa -- Leaves
Populus trichocarpa -- Xylem
Populus trichocarpa -- Mechanically treated xylem
Setaria italica -- Leaves
Setaria italica -- Flower
Setaria italica -- Root
Setaria italica -- Leaves
Setaria italica -- Flower
Setaria italica -- Root
Solanum lycopersicum -- Fruit17D
Solanum lycopersicum -- FruitRipen
Solanum lycopersicum -- FruitBreaker
Solanum lycopersicum -- FruitMG
Solanum lycopersicum -- Leaves
Solanum lycopersicum -- Flower
Solanum lycopersicum -- Fruit
Solanum lycopersicum -- Fruit17D
Solanum lycopersicum -- FruitRipen
Solanum lycopersicum -- FruitBreaker
Solanum lycopersicum -- FruitMG
Solanum lycopersicum -- Leaves
Solanum lycopersicum -- Flower
Solanum lycopersicum -- Fruit
Solanum tuberosum -- Leaves
Solanum tuberosum -- Flower
Solanum tuberosum -- Stolon
Solanum tuberosum -- Leaves
Solanum tuberosum -- Flower
Solanum tuberosum -- Stolon
Sorghum bicolor -- Leaves
Sorghum bicolor -- Flower
Sorghum bicolor -- Young panicle in early grain fill
Sorghum bicolor -- Leaves
Sorghum bicolor -- Flower
Sorghum bicolor -- Young panicle in early grain fill
Vitis vinifera -- Leaves
Vitis vinifera -- Flower
Vitis vinifera -- Fruit
Vitis vinifera -- Leaves
Vitis vinifera -- Flower
Vitis vinifera -- Fruit
Volvox carteri -- Control
Volvox carteri -- Sulfate starvation
Volvox carteri -- Phosphate starvation
Volvox carteri -- Control
Volvox carteri -- Sulfate starvation
Volvox carteri -- Phosphate starvation
Zea mays -- Leaves
Zea mays -- Female inflorescence (Ears)
Zea mays -- Male inflorescence (Tassels)
Zea mays -- Leaves
Zea mays -- Female inflorescence (Ears)
Zea mays -- Male inflorescence (Tassels)

4. Please input reference ID and position ( <3000 ):

RefID: Start: (option) End: (option)


5. Parameters (Recommend the default Settings):

Phasing size: Description of Phasing size:
Number of Phasing cycles: Number of Phasing cycles.
Number of Phasing shift cycles: Number of Phasing shift cycles.
P-value: Description of P-value
Phasing size sRNA/21-24nt sRNA: Description of Phasing size sRNA/21-24nt sRNA
Minimun number of sRNA:
Minimun number of sRNA in register: