| Unigene ID | Position 1a | Position 2b | Clone ID | Base at SNP site | Cultivar |
| UN21416 |
420 | 420 | EX753324 |
A | Raphanus raphanistrum subsp. maritimus |
| UN21416 |
420 | 420 | FD960900 |
A | Raphanus raphanistrum subsp. maritimus |
| UN21416 |
420 | 420 | EV541597 |
G | Raphanus raphanistrum subsp. raphanistrum (MS) |
| UN21416 |
420 | 420 | FD536860 |
G | Raphanus raphanistrum subsp. raphanistrum (MS) |
| UN21416 |
420 | 420 | EX766488 |
G | Raphanus raphanistrum subsp. raphanistrum (NY) |
| UN21416 |
420 | 420 | EX899028 |
A | Raphanus sativus cv Early Scarlet Globe |