| Unigene ID | Position 1a | Position 2b | Clone ID | Base at SNP site | Cultivar |
| UN21769 |
853 | 855 | FD552785 |
A | Raphanus raphanistrum subsp. landra |
| UN21769 |
853 | 855 | FD555093 |
A | Raphanus raphanistrum subsp. landra |
| UN21769 |
853 | 855 | EX750389 |
A | Raphanus raphanistrum subsp. maritimus |
| UN21769 |
853 | 855 | EV545013 |
G | Raphanus raphanistrum subsp. raphanistrum (NY) |
| UN21769 |
853 | 855 | EX763840 |
G | Raphanus raphanistrum subsp. raphanistrum (NY) |
| UN21769 |
853 | 855 | EX767874 |
G | Raphanus raphanistrum subsp. raphanistrum (NY) |
| UN21769 |
853 | 855 | FD551950 |
G | Raphanus raphanistrum subsp. raphanistrum (NY) |