| Unigene ID | Position 1a | Position 2b | Clone ID | Base at SNP site | Cultivar |
| UN14466 |
877 | 879 | EV570142 |
C | Raphanus raphanistrum subsp. landra |
| UN14466 |
877 | 879 | EV574507 |
C | Raphanus raphanistrum subsp. landra |
| UN14466 |
877 | 879 | FD535821 |
C | Raphanus raphanistrum subsp. maritimus |
| UN14466 |
877 | 879 | FD542148 |
G | Raphanus raphanistrum subsp. raphanistrum (MS) |
| UN14466 |
877 | 879 | FD971289 |
G | Raphanus raphanistrum subsp. raphanistrum (MS) |
| UN14466 |
877 | 879 | EX896547 |
G | Raphanus sativus cv Early Scarlet Globe |