| Unigene ID | Position 1a | Position 2b | cultivar | number of bases at the SNP site |
| A | G | C | T | - |
| UN20286 | 716 | 720 | Early Scarlet Globe | 1 | | | | |
| UN20286 | 716 | 720 | GSK3-1 | 3 | | | | |
| UN20286 | 716 | 720 | Raphanus raphanistrum subsp. landra | | 3 | | | |
| UN20286 | 716 | 720 | Raphanus raphanistrum subsp. maritimus | 1 | | | | |
| UN20286 | 716 | 720 | Raphanus raphanistrum subsp. raphanistrum | 2 | 3 | | | |
| UN20286 | 716 | 720 | Raphanus raphanistrum subsp. raphanistrum | 2 | 3 | | | |
| UN20286 | 716 | 720 | Raphanus sativus var. niger | | | 1 | | |