| Unigene ID | Position 1a | Position 2b | cultivar | number of bases at the SNP site |
| A | G | C | T | - |
| UN17361 | 94 | 94 | Arena | 2 | | | | |
| UN17361 | 94 | 94 | Raphanus raphanistrum subsp. landra | | 1 | | | |
| UN17361 | 94 | 94 | Raphanus raphanistrum subsp. maritimus | | 2 | | | 1 |
| UN17361 | 94 | 94 | Raphanus raphanistrum subsp. maritimus | | 2 | | | 1 |
| UN17361 | 94 | 94 | Raphanus raphanistrum subsp. raphanistrum | | | 1 | | 2 |
| UN17361 | 94 | 94 | Raphanus raphanistrum subsp. raphanistrum | | | 1 | | 2 |