| Unigene ID | Position 1a | Position 2b | cultivar | number of bases at the SNP site |
| A | G | C | T | - |
| UN26270 | 949 | 950 | Raphanus raphanistrum subsp. landra | | | 2 | | |
| UN26270 | 949 | 950 | Raphanus raphanistrum subsp. maritimus | | | 3 | 3 | |
| UN26270 | 949 | 950 | Raphanus raphanistrum subsp. maritimus | | | 3 | 3 | |
| UN26270 | 949 | 950 | Raphanus raphanistrum subsp. raphanistrum | | | | 1 | 2 |
| UN26270 | 949 | 950 | Raphanus raphanistrum subsp. raphanistrum | | | | 1 | 2 |