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Alignment for radish unigene UN02378

               1      -     51
UN02378        --> CTGCAACATCATCTATTAAAAAAGGGAGAGAATATTTGATTTTTACAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532134       <-- ..GCAACATCATCTATTAAAAAAGGGAGAGAATATTTGATTTTTACAAAG
EV566067       <-- ..gtAACATCATCTATTAAAAAAGGGAGAGAATATTTGATTTTTACAAAG
EX887836       <-- ..................................................
FD937679       <-- ..................................................
FD984181       --> CTGCAACATCATCTATTAAAAAAGGGAGAGAATATTTGATTTTTACAAAG
FD528685       --> ..GCAACATCATCTATTAAAAAAGGGAGAGAATATTTGATTTTTACAAAG
EV571278       --> ..gtAACATCATCTATTAAAAAAGGGAGAGAATATTTGATTTTTACAAAG
FD934243       --> ..................................................

               51     -    101
UN02378        --> ATGTTAGATATGGTTGTACAGCTTGATCTCAAAATCAGACTCCTTAAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532134       <-- ATGTTAGATATGGTTGTACAGCTTGATCTCAAAATCAGACTCCTTAA-CA
EV566067       <-- ATGTTAGATATGGTTGTACAGCTTGATCTCAAAATCAGACTCCTTAAACA
EX887836       <-- ..................................................
FD937679       <-- ..................................................
FD984181       --> ATGTTAGATATGGTTGTACAGCTTGATCTCAAAATCAGACTCCTTAAACA
FD528685       --> ATGTTAGATATGGTTGTACAGCTTGATCTCAAAATCAGACTCCTTAA-CA
EV571278       --> ATGTTAGATATGGTTGTACAGCTTGATCTCAAAATCAGACTCCTTAAACA
FD934243       --> ................................cgaaagacgcggtcgcgt

               101    -    151
UN02378        --> AAGTTACATTACAACTAATCTTTGCAAACATTGTCTTTACCATCTCAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532134       <-- AAGTCACATTACAACTAATCTTTGCACACATTGTCTTTACCATCTCAGCC
EV566067       <-- AAGTTACATTACAACTAATCTTTGCAAACATTGTCTTTACCATCTCAGCC
EX887836       <-- ..................................................
FD937679       <-- ..................................................
FD984181       --> AAGTTACATTACAACTAATCTTTGCAAACATTGTCTTTACCATCTCAGCC
FD528685       --> AAGTCACATTACAACTAATCTTTGCACACATTGTCTTTACCATCTCAGCC
EV571278       --> AAGTTACATTACAACTAATCTTTGCAAACATTGTCTTTACCATCTCAGCC
FD934243       --> cAGTTACATTACAACTAATCTTTGCAAACATTGTCTTTACCATCTCAGCC

               151    -    201
UN02378        --> A---AATGACTTGCTTCTTGTATATGTTTTATACTCTCAATACAGAGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532134       <-- ACCAAATGACTTGCTTCTTGTATATGTTTTATACTCTCAATACAGAGCTT
EV566067       <-- A---AATGACTTGCTTCTTGTATATGTTTTATACTCTCAATACAGAGCTT
EX887836       <-- ..................................................
FD937679       <-- ..................................................
FD984181       --> A---AATGACTTGCTTCTTGTATATGTTTTATACTCTCAATACAGAGCTT
FD528685       --> ACCAAATGACTTGCTTCTTGTATATGTTTTATACTCTCAATACAGAGCTT
EV571278       --> A---AATGACTTGCTTCTTGTATATGTTTTATACTCTCAATACAGAGCTT
FD934243       --> A---AATGACTTGCTTCTTGTATATGTTT-ATACTCTCAATACAGAGCTT

               201    -    251
UN02378        --> CCCTTGGTGCTCCGATTAAGTTAAGCGCAGTTGCTGCTATATGAGACGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532134       <-- CCCTTGGTGCTCCGATTAAGTTAAGCGCAGTTGCTGCTATATGAGACGGC
EV566067       <-- CCCTTGGTGCTCCGATTAAGTTAAGCGCAGTTGCTGCTATATGAGACGGC
EX887836       <-- ..................................................
FD937679       <-- ..................................................
FD984181       --> CCCTTGGTGCTCCGATTAAGTTAAGCGCAGTTGCTGCTATATGAGACGGC
FD528685       --> CCCTTGGTGCTCCGATTAAGTTAAGCGCAGTTGCTGCTATATGAGACGGC
EV571278       --> CCCTTGGTGCTCCGATTAAGTTAAGCGCAGTTGCTGCTATATGAGACGGC
FD934243       --> CCCTTGGTGCTCCGATTAAGTTAAGCGCAGTTGCTGCTACATGAGACGGC

               251    -    301
UN02378        --> ATGAGTCCAGCTTCAGCCATTTGATCAGCTGGTGAACCGTGGTCAATGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532134       <-- ATGAGTCCAGCTTCAGCCATTTGATCAGCTGGTGAACCGTGGTCAATGTA
EV566067       <-- ATGAGTCCAGCTTCAGCCATTTGATCAGCTGGTGAACCGTGGTCAATGTA
EX887836       <-- ..................................................
FD937679       <-- ..................................................
FD984181       --> ATGAGTCCAGCTTCAGCCATTTGATCAGCTGGTGAACCGTGGTCAATGTA
FD528685       --> ATGAGTCCAGCTTCAGCCATTTGATCAGCTGGTGAACCGTGGTCAATGTA
EV571278       --> ATGAGTCCAGCTTCAGCCATTTGATCAGCTGGTGAACCGTGGTCAATGTA
FD934243       --> ATGAGTCCAGCTTCAGCCATTTGATCAGCTGGTGAACCGTGGTCAATGTA

               301    -    351
UN02378        --> CCTATCAGGCAATACCATTGGTCTCCACTTGAGCTTCCCATCGAGAAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532134       <-- CCTATCAGGCAATACCATTGGTCTCCACTTGAGCTTCCCATCTAGAAGAC
EV566067       <-- CCTATCAGGCAATACCATTGGTCTCCACTTGAGCTTCCCATCGAGAAGAC
EX887836       <-- ..................................................
FD937679       <-- ..................................................
FD984181       --> CCTATCAGGCAA--CCATTGGTCTCCACTTGAGCTTCCCATCGAGAAGAC
FD528685       --> CCTATCAGGCAATACCATTGGTCTCCACTTGAGCTTCCCATCTAGAAGAC
EV571278       --> CCTATCAGGCAATACCATTGGTCTCCACTTGAGCTTCCCATCGAGAAGAC
FD934243       --> ACTATCAGGCAATACCATTGGTCTCCACTTGAGCTTCCCATCGAGAAGAC

               351    -    401
UN02378        --> CATCCAATGCAAGAAACTGAACCACATGCGATCCAAACCCTCCAATAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532134       <-- CATCCAATGCAAGAAACTGAACCACATGCGATCCAAACCCTCCAATGGAA
EV566067       <-- CGTCCAATGCAAGAAACTGAACCACATGCGATCCAAACCCTCCAATAGAA
EX887836       <-- ..........................................CAATAGAA
FD937679       <-- ..................................................
FD984181       --> CATCCAATGCAAGAAACTGAACCACATGCGATCCAAACCCTCCAATAGAA
FD528685       --> CATCCAATGCAAGAAACTGAACCACATGCGATCCAAACCCTCCAATGGAA
EV571278       --> CGTCCAATGCAAGAAACTGAACCACATGCGATCCAAACCCTCCAATAGAA
FD934243       --> CATCCAATGCAAGAAACTGAACCACATGCGATCCAAACCCTCCAATAGAA

               401    -    451
UN02378        --> CCTTCTTCAACCGTGATCAGCACCTCGTGAGACTTAGCTAAGCTGCGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532134       <-- CCTTCTTCAACCGTGATCAGCACCTCGTGAGACTTAGCTAAGCTGCGGAT  Raphanus raphanistrum subsp. maritimus
EV566067       <-- CCTTCTTCAACCGTGATCAGCACCTCGTGAGACTTAGCTAAGAATCGAAT  Raphanus raphanistrum subsp. landra
EX887836       <-- C-TTC-TCAA-CGTGATCAGCAC-TCGTGAGACTTAGCTAAGCTGCGAAT  Raphanus sativus var. oleiformis
FD937679       <-- ..................................................  Raphanus sativus var. oleiformis
FD984181       --> CCTTCTTCAACCGTGATCAGCACCTCGTGAGACTTAGCTAAGCTTCGGAT  Raphanus raphanistrum subsp. landra
FD528685       --> CCTTCTTCAACCGTGATCAGCACCTCGTGAGACTTAGCTAAGCTGCGGAT  Raphanus raphanistrum subsp. maritimus
EV571278       --> CCTTCTTCAACCGTGATCAGCACCTCGTGAGACTTAGCTAAGAATCGAAT  Raphanus raphanistrum subsp. landra
FD934243       --> CCTTCTTCAACCGTGATCAGCACCTCGTGAGACTTAGCTAAGCTGCGAAT  Raphanus sativus var. oleiformis

               451    -    501
UN02378        --> GAGAGCACGGTCCAACGGCTTACAGAACCGTGCATCTGCTACGGTTACGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532134       <-- GAGAGCACGGTCCAACGGCTTACAGAACCGTGCATCTGCTACTGTTACGT
EV566067       <-- GAGAGCACGGTCCAACGGCTTACAGAACCGTGCATCTGCTACGGTTACGT
EX887836       <-- GAGAGCACGGTCCAACGGCTTACAGAACCGTGCATCTGCTACGGTTACGT
FD937679       <-- ..................................................
FD984181       --> GAGAGCACGGTCCAACGGCTTACAGAACCGTGCATCTGCTACGGTTACGT
FD528685       --> GAGAGCACGGTCCAACGGCTTACAGAACCGTGCATCTGCTACTGTTACGT
EV571278       --> GAGAGCACGGTCCAACGGCTTACAGAACCGTGCATCTGCTACGGTTACGT
FD934243       --> GAGAGCACGGTCCAACGGCTTACAGAACCGTGCATCTGCTACGGTTACGT

               501    -    551
UN02378        --> TCAATCCACGTTCTTGGAGCATCACAGCCGCTCCTAAACAGCTCTGAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532134       <-- TTAATCCACGTTCTTGGAGCATCACAGCCGCTCCTAAACAGCTCTGAACC
EV566067       <-- TCAATCCACGTTCTTGGAGCATCACAGCCGCTCCTAAACAGCTCTGAACC
EX887836       <-- TCAATCCACGTTCTTGGAGCATCACAGCCGCTCCTAAACAGCTCTGAACC
FD937679       <-- ..................................................
FD984181       --> TCAATCCACGTTCTTGGAGCATCACAGCCGCTCCTAAACAGCTCTGAACC
FD528685       --> TTAATCCACGTTCTTGGAGCATCACAGCCGCTCCTAAACAGCTCTGAACC
EV571278       --> TCAATCCACGTTCTTGGAGCATCACAGCCGCTCCTAAACAGCTCTGAACC
FD934243       --> TCAATCCACGTTCTTGGAGCATCACAGCCGCTCCTAAACAGCTCTGAACC

               551    -    601
UN02378        --> GCTGAGCCATACCCCAGCAAAGCAACCCTCTCTCCTTCTTTTAAGATCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532134       <-- GCTGAGCCATACCCCAGCAAAGCAACCCTCTCTCCTTCTTTTAAGATCCT
EV566067       <-- GCTGAGCCATACCCCAGCAAAGCAACCCTCTCTCCTTCTTTTAAGATCCT
EX887836       <-- GCTGAGCCATACCCCAGCAAAGCAACCCTCTCCCCTTCTTTTAAGATCCT
FD937679       <-- ..................................................
FD984181       --> GCTGAGCCATACCCCAGCAAAGCAACCCTCTCTCCTTCTTTTAAGATCCT
FD528685       --> GCTGAGCCATACCCCAGCAAAGCAACCCTCTCTCCTTCTTTTAAGATCCT
EV571278       --> GCTGAGCCATACCCCAGCAAAGCAACCCTCTCTCCTTCTTTTAAGATCCT
FD934243       --> GCTGAGCCATACCCCAGCAAAGCAACCCTCTCCCCTTCTTTTAAGATCCT

               601    -    651
UN02378        --> ACCTTTCCCAACCTCAATAGGAACACCTTTGTTTCCTGGAGGTAACGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532134       <-- ACCTTc............................................
EV566067       <-- ACCTTTCCCAACCTCAATAGGAACACCTTTGTTTCCTGGAGGTAACGCAA
EX887836       <-- ACCTTTCCCAACCTCAACAGGAACACCTTTGTTTCCTGGAGGTAACGCAA
FD937679       <-- ..................................................
FD984181       --> ACCTTTCCCAACCTCAATAGGAACACCTTTGTTTCCTGGAGGTAACGCAA
FD528685       --> ACCTTc............................................
EV571278       --> ACCTTTCCCAACCTCAATAGGAACACCTTTGTTTCCTGGAGGTAACGCAA
FD934243       --> ACCTTTCCCAACCTCAACAGGAACACCTTTGTTTCCTGGAGGTAACGCAA

               651    -    701
UN02378        --> CGCCAATACCGTTACCTCTAGGGTAACGGAAACAAGAAGGACGGTCATCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532134       <-- ..................................................
EV566067       <-- CGCCAATACCGTTACCTCTAGGGTAACGGAAACAAGAAGGACGGTCATCG
EX887836       <-- CGCCAATACCGTTACCTCTAGGGTAACGGAAACAAGAAGGACGGTCATCG
FD937679       <-- ..................................................
FD984181       --> CGCCAATACCGTTACCTCTAGGGTAACGGAAACAAGAAGGACGGTCATCG
FD528685       --> ..................................................
EV571278       --> CGCCAATACCGTTACCTCTAGGGTAACGGAAACAAGAAGGACGGTCATCG
FD934243       --> CGCCAATACCGTTACCTCTAGGGTAACGGAAACAAGAAGGACGGTCATCG

               701    -    751
UN02378        --> ATAGCAGCAGCGGTTGCAACAATGTTAAACAGCTCTGCTTCATCCGATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532134       <-- ..................................................
EV566067       <-- A.................................................
EX887836       <-- ATAGCAGCAGCGGTTGCAACAATGTTAAACAGCTCTGCTTCATCCGATGG
FD937679       <-- ............................................CGATGG
FD984181       --> ATAGCAGCAGCGGTTGCAACAATGTTGAAGAGCTCTGCTTCATCTGATGG
FD528685       --> ..................................................
EV571278       --> A.................................................
FD934243       --> ATAGCAGCAGCGGTTGCAACAATGTTAAACAGCTCTGCTTCATCCGATGG

               751    -    801
UN02378        --> AGCCATCACTATCATGTTAGGAAGACAAGCCATAAACGTAACATCAAACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532134       <-- ..................................................
EV566067       <-- ..................................................
EX887836       <-- AGCCATCACTATCATGTTAGGAAGACAAGCCATAAACGTAACATCAAACG
FD937679       <-- AGCCATCACTATCATGTTAGGAAGACAAGCCATAAACGTAACATCAAACG
FD984181       --> AGCCATCACTATCATG..................................
FD528685       --> ..................................................
EV571278       --> ..................................................
FD934243       --> AGCCATCACTATCATGTTAGGAAGACAAGCCATAAACGTAACATCAAACG

               801    -    851
UN02378        --> CTCCACAATGTGTTGGACCATCAGCTCCCACTAGTCCAGCTCTATCCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532134       <-- ..................................................
EV566067       <-- ..................................................
EX887836       <-- CTCCACAATATGTTGGACCATCAGCTCCCACTAGTCCAGCTCTATCCATC
FD937679       <-- CTCCACAATGTGTTGGACCATCAGCTCCCACTAGTCCAGCTCTATCCATC
FD984181       --> ..................................................
FD528685       --> ..................................................
EV571278       --> ..................................................
FD934243       --> CTCCACAATGTGTTGGACCATCAGCTCCCACTAGTCCAGCTCTATCCATC

               851    -    901
UN02378        --> GCAAATCTCACCGGTAACTTCTGCAAATCCACATCATGTACAACCTGGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532134       <-- ..................................................
EV566067       <-- ..................................................
EX887836       <-- GCAAATCTCACCGGTAACTTCTGCAAATCCACATCATGTACAACCTGGTC
FD937679       <-- GCAAATCTCACCGGTAACTTCTGCAAATCCACATCATGTACAACCTGGTA
FD984181       --> ..................................................
FD528685       --> ..................................................
EV571278       --> ..................................................
FD934243       --> GCAAATCT..........................................

               901    -    951
UN02378        --> ATAAGCACGCTGCATGAAAGAGGAATAGATTGCACAGAAGGGCTTGAGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532134       <-- ..................................................
EV566067       <-- ..................................................
EX887836       <-- ATAAGCACGCTGCATGAAAGAGGAATAGATTGCACAGAAGGGCTTAAGTC
FD937679       <-- ATAAGCACGCTGCATGAAAGAGGAATAGATTGCACAGAAGGGCTTGAGTC
FD984181       --> ..................................................
FD528685       --> ..................................................
EV571278       --> ..................................................
FD934243       --> ..................................................

               951    -   1001
UN02378        --> CCTCACATGCTAAGCCAGCAGCAAAAGTAGCTGCATGCTGTTCCGCTATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532134       <-- ..................................................
EV566067       <-- ..................................................
EX887836       <-- CCTCACATGCTAAGCCAGCAGCAAAAGTAGCTGCATGCTGTTCCGCTATT
FD937679       <-- CCTCACATGCTAAACCAGCAGCAAAAGTAACTGCATGCTGTTCCGCTATT
FD984181       --> ..................................................
FD528685       --> ..................................................
EV571278       --> ..................................................
FD934243       --> ..................................................

               1001   -   1051
UN02378        --> CCCACATCGAAACATCTAGTTGGGAAGCGACGTTGGAAGAGATTCAACCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532134       <-- ..................................................
EV566067       <-- ..................................................
EX887836       <-- CCCACATCGAAACATCTAGTTGGGAAGCGACGTTGGAAGAGATTCAACCC
FD937679       <-- CCCACATCGAAACATCTAGTTGGGAAGCGACGTTGGAAGAGATTCAACCC
FD984181       --> ..................................................
FD528685       --> ..................................................
EV571278       --> ..................................................
FD934243       --> ..................................................

               1051   -   1101
UN02378        --> TGTCCCACCTCCCATGGCTGCATGAATAGCAACCACGTCTTTGTCTACCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532134       <-- ..................................................
EV566067       <-- ..................................................
EX887836       <-- TGTCCCACCTCCCATGGCTGCATGAATAGCAACCACGTCTTTGTCTACCT
FD937679       <-- CGTCCCACCTCCCATGGCTGCATGAATAGCAACCACGTCTTTGTCTACCT
FD984181       --> ..................................................
FD528685       --> ..................................................
EV571278       --> ..................................................
FD934243       --> ..................................................

               1101   -   1151
UN02378        --> CTGCTTCCGCCACTAATGCCTCCGCAAAGTACGTTGTGTAAGACTGAGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532134       <-- ..................................................
EV566067       <-- ..................................................
EX887836       <-- CTGCTTCCGCCACTAATGCCTCCGCAAAGTACGTTGTGTAAGACTGAGTC
FD937679       <-- CTGCTTCCGCCACTAATGCCTCCGCAAAGTACGTTGTGTAAGACTGAGTC
FD984181       --> ..................................................
FD528685       --> ..................................................
EV571278       --> ..................................................
FD934243       --> ..................................................

               1151   -   1201
UN02378        --> TTGTTAGTAGTTTTGAACTGTTTACTCGTAGCAGGATCAAACTTCACAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532134       <-- ..................................................
EV566067       <-- ..................................................
EX887836       <-- TTGTTAGTAGTTTTGAACTGTTTACTCGTAGCAGGATCAAACTTCACAAC
FD937679       <-- TTGTTAGTAGTTTTGAACTGTTTACCCGTAGCAGGATCAAACTTCACAAC
FD984181       --> ..................................................
FD528685       --> ..................................................
EV571278       --> ..................................................
FD934243       --> ..................................................

               1201   -   1251
UN02378        --> ACCATGGTATTTGTCATCAGCTCTCTCTGCGTAAGGATAACCACGACCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532134       <-- ..................................................
EV566067       <-- ..................................................
EX887836       <-- ACCATGGTATTTGTCATCAGCTCTCTCTGCc...................
FD937679       <-- ACCATGGTATTTGTCATCAGCTCTCTCTGCGTAAGGATAACCACGACCTT
FD984181       --> ..................................................
FD528685       --> ..................................................
EV571278       --> ..................................................
FD934243       --> ..................................................

               1251   -   1301
UN02378        --> TCTCTGTTATGACATGAATAAGCACTGGTCCTGTGGTTCTTGCACTCTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532134       <-- ..................................................
EV566067       <-- ..................................................
EX887836       <-- ..................................................
FD937679       <-- TCTCTGTTATGACATGAATAAGCACTGGTCCTGTGGTTCTTGCACTCTTA
FD984181       --> ..................................................
FD528685       --> ..................................................
EV571278       --> ..................................................
FD934243       --> ..................................................

               1301   -   1351
UN02378        --> ACTTCTTTAAGAATGGCTACCAAATCATCTATGTTGTGTCCATCGACTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532134       <-- ..................................................
EV566067       <-- ..................................................
EX887836       <-- ..................................................
FD937679       <-- ACTTCTTTAAGAATGGCTACCAAATCATCTATGTTGTGTCCATCGACTGG
FD984181       --> ..................................................
FD528685       --> ..................................................
EV571278       --> ..................................................
FD934243       --> ..................................................

               1351   -   1401
UN02378        --> TCCAATATAGTAGAGTCCGAGTTCTTCAAATAATGTTGATCCAGTTCCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532134       <-- ..................................................
EV566067       <-- ..................................................
EX887836       <-- ..................................................
FD937679       <-- TCCAATATAGTAGAGTCCGAGTTCTTCAAATAATGTTGATCCAGTTCCGC
FD984181       --> ..................................................
FD528685       --> ..................................................
EV571278       --> ..................................................
FD934243       --> ..................................................

               1401   -   1451
UN02378        --> TTATCATCCCTCTAGCGTATTCATCTACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532134       <-- .............................
EV566067       <-- .............................
EX887836       <-- .............................
FD937679       <-- TTATCATCCCTCTAGCGTATTCATCTACC
FD984181       --> .............................
FD528685       --> .............................
EV571278       --> .............................
FD934243       --> .............................