Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN02598

               1      -     51
UN02598        --> GAAACAAAACCAAAGTACAGCTACAGCTTCATATAATTCAATATGTAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY950390       <-- ..................................................
FY446796       <-- ..................................................
FD547401       --> GAAACAAAACCAAAGTACAGCTACAGCTTCATATAATTCAATATGTAAGG
FD974503       --> ................gCAGCTACAGCTTCATATAATTCAATATGTAAGG
EY911493       --> ..................................................
EY945706       --> ..................................................
FY435681       --> ..................................................
FY435643       --> ..................................................

               51     -    101
UN02598        --> TGTTGAAGTAACAAAAATGTCCTCTTTCAGCAGAAAGCGAAACCATTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY950390       <-- ..................................................
FY446796       <-- ..................................................
FD547401       --> TGTTGAAGTAACAAAAATGTCCTCTTTCAGCAGAAAGCGAAACCATTGAG
FD974503       --> TGTTGAAGTAACAAAAATGTCCTCTTTCAGCAGAAAGCGAAACCATTGAG
EY911493       --> ..................................................
EY945706       --> ..................................................
FY435681       --> ..................................................
FY435643       --> ..................................................

               101    -    151
UN02598        --> CCATTAAGCCATCCATTCTTGGTCCCTTTCACTCCCGGATAAGAGAACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY950390       <-- ........................................gAGAGAACAT
FY446796       <-- ..................................................
FD547401       --> CCATTAAGCCATCCATTCTTGGTCCCTTTCACTCCCGGATAAGAGAACAT
FD974503       --> CCATTAAGCCATCCATTCTTGGTCCCTTTCACTCCCGGATAAGAGAACAT
EY911493       --> .........................................AGAGAACAT
EY945706       --> ........................................gAGAGAACAT
FY435681       --> ..................................................
FY435643       --> ..................................................

               151    -    201
UN02598        --> CGTGACTCGTGTTGAGTAAATAGTTTATAACAACTTCAGGTCATACATAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY950390       <-- CGTGACTCGTGTTGAGTAAATAGTTTATAACAACTTCAGGTCATACATAC
FY446796       <-- ..................................................
FD547401       --> CGTGACTCGTGTTGAGTAAATAGTTTATAACAACTTCAGGTCATACATAC
FD974503       --> CGTGACTCGTGTTGAGTAAATAGTTTATAACAACTTCAGGTCATACATAC
EY911493       --> CGTGACTCGTGTTGAGTAAATAGTTTATAAC---TTCAGGTCATACATAC
EY945706       --> CGTGACTCGTGTTGAGTAAATAGTTTATAACAACTTCAGGTCATACATAC
FY435681       --> ..................................gTCAGGTC-TACATAC
FY435643       --> ............................................ACATAC

               201    -    251
UN02598        --> TAATATCATAATATTATTAGAGCGTATCTCAAACTCAAAGTACTAGAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY950390       <-- TAATATCATAATATTATTAGAGCGTATCTCAAACTCAAAGTACTAGAGAA
FY446796       <-- ..................................................
FD547401       --> TAATATCATAATATTATTAGAGCGTATCTCAAACTCAAAGTACTAGAGAA
FD974503       --> TAATATCATAATATTATTAGAGCGTATCTCAAACTCAAAGTACTAGAGAA
EY911493       --> TAATATCATAATATTATTAGAGCGTATCTCAAACTCAAAGTACTAGAGAA
EY945706       --> TAATATCATAATATTATTAGAGCGTATCTCAAACTCAAAGTACTAGAGAA
FY435681       --> TAATATCATAATATTATTAGAGCGTATCTCAAACTCAAAGTACTAGAGAA
FY435643       --> TAATATCATAATATTATTAGAGCGTATCTCAAACTCAAAGTACTAGAGAA

               251    -    301
UN02598        --> TCATCTTAAAAGGATGAAGCATCTTTTATTGTGTAAAGGTGTGATGATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY950390       <-- TCATCTTAAAAGGATGAAGCATCTTTTATTGTGTAAAGGTGTGATGATCT
FY446796       <-- ..................................................
FD547401       --> TCATCTTAAAAGGATGAAGCATCTTTTATTGTGTAAAGGTGTGATGATCT
FD974503       --> TCATCTTAAAAGGATGAAGCATCTTTTATTGTGTAAAGGTGTGATGATCT
EY911493       --> TCATCTTAAAAGGATGAAGCATCTTTTATTGTGTAAAGGTGTTATGATCT
EY945706       --> TCATCTTAAAAGGATGAAGCATCTTTTATTGTGTAAAGGTGTGATGATCT
FY435681       --> TCATCTTAAAAGGATGAAGCATCTTTTATTGTGTAAAGGTGTGATGATCT
FY435643       --> TCATCTTAAAAGGATGAAGCATCTTTTATTGTGTAAAGGTGTGATGATCT

               301    -    351
UN02598        --> TTCTTCAAAAAGCAGAGCTACCACCCCTTGTGGACATGGTCTGCATAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY950390       <-- TTCTTCAAAAAGTAGAGCTACCACCCCTTCTGGACATGGTCTGCATAACT
FY446796       <-- ..................................................
FD547401       --> TTCTTCAAAAAGCAGAGCTACCACCCCTTGTGGACATGGTCTGCATAACT
FD974503       --> TTCTTCAAAAAGCAGAGCTACCACCCCTTGTGGACATGGTCTGCATAACT
EY911493       --> TTCTTCAAAAAGCAGAGCTACCACCCCTTGTGGACATGGTCTGCATAACT
EY945706       --> TTCTTCAAAAAGTAGAGCTACCACCCCTTCTGGACATGGTCTGCATAACT
FY435681       --> TTCTTCAAAAAGCAGAGCTACGACCCCTTGTGGACATGGTCTGCATAACT
FY435643       --> TTCTTCAAAAAGCAGAGCTACGACCCCTTGTGGACATGGTCTGCATAACT

               351    -    401
UN02598        --> CCATTCATCAGTCCTTGAAACGATTTCCCAACTCCAGCTCCAATGTCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY950390       <-- CCATTCATCAGTCCTTGAAACGATTTCCCAACTCCAGCTCCAATGTCTTG
FY446796       <-- ..................................................
FD547401       --> CCATTCATCAGTCCTTGAAACGATTTCCCAACTCCAGCTCCAATGTCTTG
FD974503       --> CCATTCATCAGTCCTTGAAACGATTTCCCAACTCCAGCTCCAATGTCTTG
EY911493       --> CCATTCATCAGTCCTTGAAACGATTTCCCAACTCCAGCTCCAATGTCTTG
EY945706       --> CCATTCATCAGTCCTTGAAACGATTTCCCAACTCCAGCTCCAATGTCTTG
FY435681       --> CCATTCATCAGTCCTTGAAACGATTTCCCAACTCCAGCACCAATGTCTTG
FY435643       --> CCATTCATCAGTCCTTGAAACGATTTCCCAACTCCAGCACCAATGTCTTG

               401    -    451
UN02598        --> TGCAAAATACTTGGCCTCTTGTATGCTCTTCTTCAAATCAAAAGCATCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY950390       <-- TGCAAAATACTTTGCCTCTTGTATGCTCTTCTTCAAATCAAAAGCATCTT
FY446796       <-- ..................................................
FD547401       --> TGCAAAATACTTGGCCTCTTGTATGCTCTTCTTCAAATCAAAAGCATCTT
FD974503       --> TGCAAAATACTTGGCCTCTTGTATGCTCTTCTTCAAATCAAAAGCATCTT
EY911493       --> TGCAAAATACTTTGCCTCTTGTATGCTCTTCTTCAAATCAAAAGCATCTT
EY945706       --> TGCAAAATACTTTGCCTCTTGTATGCTCTTCTTCAAATCAAAAGCATCTT
FY435681       --> TGCAAAATACTTGGCCTCTTGTATGCTCTTCTTCAAATCAAAAGCATCTT
FY435643       --> TGCAAAATACTTGGCCTCTTGTATGCTCTTCTTCAAATCAAAAGCATCTT

               451    -    501
UN02598        --> TGACTCTATCATCCAAGAACGCCCACGTATCGCGATACTCTGGGGAGTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY950390       <-- TGACTCTATCATCCAAGAACGCCCACGTATCGCGATACTCTGGGGAGTCA  Raphanus sativus cv Rat-Tail Radish #3870
FY446796       <-- ..........................................GGGAGTCA  Raphanus sativus cv GSK3-1
FD547401       --> TGACTCTATCATCCAAGAACGCCCATGTATCGCGATACTCTGGGGAGTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD974503       --> TGACTCTATCATCCAAGAACGCCCATGTATCGCGATACTCTGGGGAGTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911493       --> TGACTCTATCATCCAAGAACGCCCATGTATCGCGATACTCTGGGGAGTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY945706       --> TGACTCTATCATCCAAGAACGCCCACGTATCGCGATACTCTGGGGAGTCA  Raphanus sativus cv Rat-Tail Radish #3870
FY435681       --> TGACTCTATCATCCAAGAACGCCCACGTATCGCGATACTCTGGGGAGTCA  Raphanus sativus cv GSK3-1
FY435643       --> TGACTCTATCATCCAAGAACGCCCACGTATCGCGATACTCTGGGGAGTCA  Raphanus sativus cv GSK3-1

               501    -    551
UN02598        --> TCAGTAAGCATATAAATCTCGGTGGTTGAGTAAACACCTCCAAGAACAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY950390       <-- TCAGTAAGCATATAAATCTCGGTGGTTGAGTAAACACCTCCAAAAACAGT
FY446796       <-- TCAGTAAGCATATAAATCTCGGTGGTTGAGTAAACACCTCCAAGAACAGT
FD547401       --> TCAGTAAGCATATAAATCTCGGTGGTTGAGTAAACACCTCCAAGAACAGT
FD974503       --> TCAGTAAGCATATAAATCTCGGTGGTTGAGTAAACACCTCCAAGAACAGT
EY911493       --> TCAGTAAGCATATAAATCTCGGTGGTTGAGTAAACACCTCCAAGAACAGT
EY945706       --> TCAGTAAGCATATAAATCTCGGTGGTTGAGTAAACACCTCCAAAAACAGT
FY435681       --> TCAGTAAGCATATAAATCTCGGTGGTTGAGTAAACACCTCCAAGAACAGT
FY435643       --> TCAGTAAGCATATAAATCTCGGTGGTTGAGTAAACACCTCCAAGAACAGT

               551    -    601
UN02598        --> GCGCTTGACATACCAATCCAAATCAGAAGATCCATCTCCAACAGTGTGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY950390       <-- GCGCTTGACATACCAATCCAAATCAGAAGATCCATCTCCAACAGTGTGCC
FY446796       <-- ACGCTTGACATACCAATCCAAATCAGAAGATCCATCTCCAACAGTGTGCC
FD547401       --> GCGCTTGACATACCAATCCAAAT...........................
FD974503       --> GCGCTTGACATACCAATCCAAATCAGAAGCTCCATCTCCAACAGTGTGCC
EY911493       --> ACGCTTGACATACCAATCCAAATCAGAAGCTCCATCTCCAACAGTGTGCC
EY945706       --> GCGCTTGACATACCAATCCAAATCAGAAGATCCATCTCCAACAGTGTGCC
FY435681       --> ACGCTTGACATACCAATCCAAATCAGAAGATCCATCTCCAACAGTGTGCC
FY435643       --> ACGCTTGACATACCAATCCAAATCAGAAGATCCATCTCCAACAGTGTGCC

               601    -    651
UN02598        --> ATATCTCATCAACCAACATCGCCCGTTGCTTAAAACTCGTCGGAACATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY950390       <-- ATATCTCATCAACCAACATCGCCCGCTGCTTAAAACc.............
FY446796       <-- ATATCTCATCAACCAACATCGCCCGTTGCTTAAAACTCGTCGGAACATTC
FD547401       --> ..................................................
FD974503       --> ATATCTCATCAACCAACATCGCCCGTTGCTTAAAACTCGTCGGAACATTC
EY911493       --> ATATCTCATCAACCAACATCGCCCGTTGCTTAAAACTCGTCGGAACATTC
EY945706       --> ATATCTCATCAACCAACATCGCCCGCTGCTTAAAACc.............
FY435681       --> ATATCTCATCAACCAACATCGCCCGTTGCTTAAAACTCGTCGGAACATTC
FY435643       --> ATATCTCATCAACCAACATCGCCCGTTGCTTAAAACTCGTCGGAACATTC

               651    -    701
UN02598        --> GCCGGATGCGCTTGAATACTAAGAGCTTGAGGCCATTTGGACATGTAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY950390       <-- ..................................................
FY446796       <-- GCCGGATGCGCTTGAATACTAAGAGCTTGAGGCCATTTGGACATGTAAGG
FD547401       --> ..................................................
FD974503       --> GCCGGATGCGCTTGAATACTAAGAGCTTGAGGCCATTTGGACATGTAAGG
EY911493       --> GCCGGATGCGCTTGGATACTAAGAGCTTGAGGCCATTTGGGCATGTAAGG
EY945706       --> ..................................................
FY435681       --> GCCGGATGCGCTTGAATACTAAGAGCTTGAGGCCATTTGGACATGTAAGG
FY435643       --> GCC...............................................

               701    -    751
UN02598        --> GATCTGCATCTCCAACCGAATCCTAACGAGCTTGGAAACACGTTCACTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY950390       <-- ..................................................
FY446796       <-- GATCTGCATCTCCAACCGAATCCTAACGAGCTTGGAAACACGTTCACTGG
FD547401       --> ..................................................
FD974503       --> AATCTGCATCTCCA....................................
EY911493       --> AATCTGCATCTCCAATCGAATTTTAACGAGCTTGGAAACGCGTTCACTGG
EY945706       --> ..................................................
FY435681       --> GATCTGCATCTCCAACCGAATCCTAACGAGCTTGGAAACACGTTCACTGG
FY435643       --> ..................................................

               751    -    801
UN02598        --> GAATCAGGTTTTGCAGATCCAAACCAGAGTCTACTCTGTCGATAAGCAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY950390       <-- ..................................................
FY446796       <-- GAATCAGGTTTTGCAGATCCAAACCAGAGTCTACTCTGTCGATAAGCAGT
FD547401       --> ..................................................
FD974503       --> ..................................................
EY911493       --> GAATCAGGTTTTGCAGATCCAAACCAGAGTCTACTCTATCGATAAGCAGT
EY945706       --> ..................................................
FY435681       --> GAATCAGGTTTTGCAGATCCAAACCAGAGTCTACTCTGTCGATAAGCAGT
FY435643       --> ..................................................

               801    -    851
UN02598        --> TGCAAGCATTCATCCATGAAGTACTCAACAAGAGCAGCTTCTTTCCTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY950390       <-- ..................................................
FY446796       <-- TGCAAGCATTCATCCATGAAGTACTCAACAAGAGCAGCTTCTTTCCTGGA
FD547401       --> ..................................................
FD974503       --> ..................................................
EY911493       --> TGCAAGCATTCATCCATGAAGTACTCAACAAGAGCAGCTTCTTTCCTGGA
EY945706       --> ..................................................
FY435681       --> TGCAAGCA..........................................
FY435643       --> ..................................................

               851    -    901
UN02598        --> GAAAGAGCCAACAATGGAAGGAGACACACCAACTTCTCTCGATCCTGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY950390       <-- ..................................................
FY446796       <-- GAAAGAGCCAACAATGGAAGGAGACACACCAACCTCTCTCGATCCTGCAA
FD547401       --> ..................................................
FD974503       --> ..................................................
EY911493       --> GAAAGAGCCAACAATGGAAAGAGACACACCAACTTCTCTCGAGCCTGCAA
EY945706       --> ..................................................
FY435681       --> ..................................................
FY435643       --> ..................................................

               901    -    951
UN02598        --> TCATCGCTTCCTCCGTCCAACCTAACCTCGGCACGTGGCGAAGAGACGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY950390       <-- ..................................................
FY446796       <-- TCATCGCTTCCTCCGTCCAACCTAACCTCGGCACGTGGCGAAGAGACGCG
FD547401       --> ..................................................
FD974503       --> ..................................................
EY911493       --> TCATCGCTTCCTCCGTCCAACCTAACCTCGGCACGTGGCGAAGAGAAGCG
EY945706       --> ..................................................
FY435681       --> ..................................................
FY435643       --> ..................................................

               951    -   1001
UN02598        --> GCGAGGACACGAGCCTGCTCTTCCTGAAACTCAGCTCTCGGCTTCCTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY950390       <-- ..................................................
FY446796       <-- GCGAGAACACGAGCCTGCTCTTCCTGAAACTCAGCTCTCGGCTTCCTGCT
FD547401       --> ..................................................
FD974503       --> ..................................................
EY911493       --> GCGAGGACACGAGCCTGCTCTTCCTGAAACTCAGCTCTCGGCT-CCTGCT
EY945706       --> ..................................................
FY435681       --> ..................................................
FY435643       --> ..................................................

               1001   -   1051
UN02598        --> GCTCTCATCTCTACGAGTTCCTTCTCTTGTACCCGTGGAAGAAGAAGTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY950390       <-- ..................................................
FY446796       <-- GCTCTCATCTCGACGAGTTCCTTCTCTTGTACCCGTGGAAGAAGAAGTGG
FD547401       --> ..................................................
FD974503       --> ..................................................
EY911493       --> GCTCTCATCTCTACGAGGT-CTTCTCGTGTAtcgtg..............
EY945706       --> ..................................................
FY435681       --> ..................................................
FY435643       --> ..................................................

               1051   -   1101
UN02598        --> GATCCGGTTGATTAAGGTTTACGGATTGATTACCAATCGGAGATTCGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY950390       <-- ..................................................
FY446796       <-- GATCCGGTTGATTAAGGTTTACGGATTGATTACCAATCGGAGATTCGGTG
FD547401       --> ..................................................
FD974503       --> ..................................................
EY911493       --> ..................................................
EY945706       --> ..................................................
FY435681       --> ..................................................
FY435643       --> ..................................................

               1101   -   1151
UN02598        --> TGGCCCATCGAGGAGGAAGTGCAGAGAGGGGAAGTGTAGGAGTAAGGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY950390       <-- ..................................................
FY446796       <-- TGGCCCATCGAGGAGGAAGTGCAGAGAGGGGAAGTGTAGGAGTAAGGGAT
FD547401       --> ..................................................
FD974503       --> ..................................................
EY911493       --> ..................................................
EY945706       --> ..................................................
FY435681       --> ..................................................
FY435643       --> ..................................................

               1151   -   1201
UN02598        --> GATGGTGGTGGTGGGCCTGGGCTTGGGTAATCGGAGGAGGCGGCTGGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY950390       <-- ..................................................
FY446796       <-- GATGGTGGTGGTGGGCCTGGGCTTGGGTAATCGGAGGAGGCGGCTGGTTG
FD547401       --> ..................................................
FD974503       --> ..................................................
EY911493       --> ..................................................
EY945706       --> ..................................................
FY435681       --> ..................................................
FY435643       --> ..................................................

               1201   -   1251
UN02598        --> CGAAACCAGCTCCGAGAAGACGTTTCGCCGCCGTTCGATACATCGCCGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY950390       <-- ..................................................
FY446796       <-- CGAAACCAGCTCCGAGAAGACGTTTCGCCGCCGTTCGATACATCGCCGGA
FD547401       --> ..................................................
FD974503       --> ..................................................
EY911493       --> ..................................................
EY945706       --> ..................................................
FY435681       --> ..................................................
FY435643       --> ..................................................

               1251   -   1301
UN02598        --> GTGAATGAGGGAGGGGTTGAGTTTTTTTTTTTTTGGACACGGGATGAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY950390       <-- ..................................................
FY446796       <-- GTGAATGAGGGAGGGGTTGAGTTTTTTTTTTTTTGGACACGGGATGAGTT
FD547401       --> ..................................................
FD974503       --> ..................................................
EY911493       --> ..................................................
EY945706       --> ..................................................
FY435681       --> ..................................................
FY435643       --> ..................................................