1      -     51
UN02708        --> GGGCGCCGATCGTTCCTCCAACTTCTCCACTTGGTCTCCGACAGGGATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766589       <-- ..................................................
FD544809       <-- ..................................................
EY919360       <-- ..................................................
FD555372       <-- ..................................................
FD548658       --> GGGCGCCGATCGTTCCTCCAACTTCTCCACTTGGTCTCCGACAGGGATTA
FD559714       --> ..................................................
EY914659       --> ..................................................
EX762296       --> ..................................................
EY923577       --> ..................................................

               51     -    101
UN02708        --> CATACATACAGACATCTATACTCAAAATATCTCCTTACTAATCACAAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766589       <-- ..................................................
FD544809       <-- ..................................................
EY919360       <-- ..................................................
FD555372       <-- ..................................................
FD548658       --> CATACATACAGACATCTATACTCAAAATATCTCCTTACTAATCACAAACT
FD559714       --> .ggACATACAGACATCTATACTCAAAATATCTCCTTACTAATCACAAACT
EY914659       --> ..................................ggACTAATCACAAACT
EX762296       --> .....................................ggAATCACAAACT
EY923577       --> .....................................ggAATCACAAACT

               101    -    151
UN02708        --> CTTCTGTTCCTTTCAAATATGACTGCTCTCTACTCGTTAGCCTCCGCCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766589       <-- ..................................................
FD544809       <-- ..................................................
EY919360       <-- ..................................................
FD555372       <-- ..................................................
FD548658       --> CTTCTGTTCCTTTCAAATATGACTGCTCTCTACTCGTTAGCCTCCGCCAC
FD559714       --> CTTCTGTTCCTTTCAAATATGACTGCTCTCTACTCGTTAGCCTCCGCCAC
EY914659       --> CTTCTGTTCCTTTCAAATATGACTGCTCTCTACTCATTAGTCTCCGCCAC
EX762296       --> CTTCTGTTCCTTTCAAATATGACTGCTCTCTACTCGTTAGCCTCCGCCAC
EY923577       --> CTTCTGTTCCTTTCAAATATGACTGCTCTCTACTCGTTAGCCTCCGCCAC

               151    -    201
UN02708        --> TCGACTCTCCGTCTCG------CTGCCTAATCATCACGTTGTGCTCCCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766589       <-- ..................................................
FD544809       <-- ..................................................
EY919360       <-- ..................................................
FD555372       <-- ..................................................
FD548658       --> TCGACTCTCCGTCTCG------CTGCCTAATCATCACGTTGTGCTCCCCA
FD559714       --> TCGACTCTCCGTCTCG------CTGCCTAATCATCACGTTGTGCTCCCCA
EY914659       --> TCGACTCTCCGTCTCGGTCTCGCTGCCTAATCATCACGTTGTGCTCCCCA
EX762296       --> TCGACTCTCCGTCTCG------CTGCCTAATCATCACGTTGTGCTCCCCA
EY923577       --> TCGACTCTCCGTCTCG------CTGCCTAATCATCACGTTGTGCTCCCCA

               201    -    251
UN02708        --> CGCGTCGCCGTTTCCATTTGCCGTTAGCAGCTCTTGCCTCATCGTCTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766589       <-- .........................AGCGGCTCTTGCCTCATCGTCTCCA
FD544809       <-- ..................................................
EY919360       <-- ..................................................
FD555372       <-- ..................................................
FD548658       --> CGCGTCCCCGTTCCCATTTGCCGTTAGCAGCTCTTGCCTCATCGTCTCCA
FD559714       --> CGCGTCGCCGTTTCCATTTGCCGTTAGCAGCTCTTGCCTCATCGTCTCCA
EY914659       --> CGCGGCGCCGTTTCCATTTGCCGTTAGCAACTCTTGCCTCATCGTCCCCA
EX762296       --> CGCGTCCCCGTTTCCATTTGCCGTTAGCGGCTCTTGCCTCATCGTCTCCA
EY923577       --> CGCGTCGCCGTTTCCATTTGCCGTTAGCAGCTCTTGCCTCATCGTCTCCA

               251    -    301
UN02708        --> GAGTCATCATCATCGACCCCTAGCCCTATCTCGATCCCCGTTGTCAACGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766589       <-- GAGTCATCATCATCGACCCCTAGCCCTATCTCGATCCCCATTGTCAACGG
FD544809       <-- .............................CTCGATCCCCGTTGTCAACGG
EY919360       <-- ..................................................
FD555372       <-- ..................................................
FD548658       --> GAGTCATCATCATCGACCCCTAGCCCTATCTCGATCCCCGTTGTCAACGG
FD559714       --> GAGTCATCATCATCGACCCCTAGCCCTATCTCGATCCCCGTTGTCAACGG
EY914659       --> GAGTCATCATCATCGACCCCTAGCCCTATCTCGATCCCCGTTGTCAACGG
EX762296       --> GAGTCATCATCATCGACCCCTAGCCCTATCTCGATCCCCATTGTCAACGG
EY923577       --> GAGTCATCATCATCGACCCCTAGCCCTATCTCGATCCCCGTTGTCAACGG

               301    -    351
UN02708        --> GAACACGTTGTCAACTTCTCATGGAACTCATCACGATAAGGTTGTTGTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766589       <-- GAACACGTTGTCAACTTCTCATGGAACTCATCACGATAAGGTTGTTGTGG
FD544809       <-- GAACACGTTGTCAACTTCTCATGGAACTCATCACGATAAGGTTGTTGTGG
EY919360       <-- .....................TGGAACTCATCACGATAAGGTTGTTGTGG
FD555372       <-- ..................................................
FD548658       --> GAACACGTTGTCAACTTCTCATGGAACTCATCACGATAAGGTTGTTGTGG
FD559714       --> GAACACGTTGTCAACTTCTCATGGAACTCATCACGATAAGGTTGTTGTGG
EY914659       --> AAACACGCTGTCAACTTCTCATGGAACTCATCACGATAAGGTTGTTGTGG
EX762296       --> GAACACGTTGTCAACTTCTCATGGAACTCATCACGATAAGGTTGTTGTGG
EY923577       --> GAACACGTTGTCAACTTCTCATGGAACTCATCACGATAAGGTTGTTGTGG

               351    -    401
UN02708        --> ATGATAACAGCCTATTTGCTCGCTTCTTTCGCTCCACCGAATCAACCGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766589       <-- ATGATAACACCCTATTTGCTCGCTTCTTTCGCTCCACCGAATCAACCGTC
FD544809       <-- ATGATAACACCCTATTTGCCCGCTTCTTTCGCTCCACCGAATCAACCGTC
EY919360       <-- ATGATAACAGCCTATTTGCTCGCTTCTTTCGCTCCACCGAATCAACCGTC
FD555372       <-- ..................................................
FD548658       --> ATGATAACACCCTATTTGCCCGCTTCTTTCGCTCCACCGAATCAACCGTC
FD559714       --> ATGATAACAGCCTATTTGCTCGCTTCTTTCGCTCCACCGAATCAACCGTC
EY914659       --> ATGATAACAGCCTATTTACTCGCTTCTTTCGCTCCACCGAATCAACCGTC
EX762296       --> ATGATAACACCCTATTTGCTCGCTTCTTTCGCTCCACCGAATCAACCGTC
EY923577       --> ATGATAACAGCCTATTTGCTCGCTTCTTTCGCTCCACCGAATCAACCGTC

               401    -    451
UN02708        --> GAGAGGATCATATTTGATTTCCGGTTCCTGGCGCTCTTGGCAGTAGGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766589       <-- GAGAGGATCATATTTGATTTCCGGTTCCTGGCGCTCTTGGCAGTAGGAGG
FD544809       <-- GAGAGGATCATATTTGATTTCCGGTTCCTGGCGCTCTTGGCAGTAGGAGG
EY919360       <-- GAGAGGATCATATTTGATTTCCGGTTCCTGGCGCTCTTGGCAGTAGGAGG
FD555372       <-- ..................................................
FD548658       --> GAGAGGATCATATTTGATTTCCGGTTCCTGGCGCTCTTGGCAGTAGGAGG
FD559714       --> GAGAGGATCATATTTGATTTCCGGTTCCTGGCGCTCTTGGCAGTAGGAGG
EY914659       --> GAGAGGATCATATTTGATTTCCGGTTCCTGGCGCTCTTGGCAGTAGGAGG
EX762296       --> GAGAGGATCATATTTGATTTCCGGTTCCTGGCGCTCTTGGCAGTAGGAGG
EY923577       --> GAGAGGATCATATTTGATTTCCGGTTCCTGGCGCTCTTGGCAGTAGGAGG

               451    -    501
UN02708        --> TTCTCTGGCTGGTTCGCTACTCTGCTTCCTCAATGGGTGCGTCTATGTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766589       <-- TTCTCTGGCTGGTTCGCTACTCTGCTTCCTCAATGGGTGCGTCTATGTCA
FD544809       <-- TTCTCTGGCTGGTTCGCTACTCTGCTTCCTCAATGGGTGCGTCCATGTCA
EY919360       <-- TTCTCTGGCTGGTTCGCTACTCTGCTTCCTCAATGGGTGCGTCTATGTCA
FD555372       <-- ..................................................
FD548658       --> TTCTCTGGCTGGTTCGCTACTCTGCTTCCTCAATGGGTGCGTCCATGTCA
FD559714       --> TTCTCTGGCTGGTTCGCTACTCTGCTTCCTCAATGGGTGCGTCTATGTCA
EY914659       --> TTCTCTGGCTGGTTCGCTACTCTGCTTCCTCAATGGGTGCGTCTATGTCG
EX762296       --> TTCTCTGGCTGGTTCGCTACTCTGCTTCCTCAATGGGTGCGTCTATGTCA
EY923577       --> TTCTCTGGCTGGTTCGCTACTCTGCTTCCTCAATGGGTGCGTCTATGTCA

               501    -    551
UN02708        --> TGGAAGCATATAAAGTCTATTGGACTAACTGTGTCAAAGGCATCCACAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766589       <-- TGGAAGCATATAAAGTCTATTGGACTAACTGTGTCAAAGGCATCCACAAG
FD544809       <-- TGGAAGCATATAAAGTCTATTGGACTAACTGTGTCAAAGGCATCCACAAG
EY919360       <-- TGGAAGCATATAAAGTCTATTGGACTAACTGTGTCAAAGGCATCCACAAG
FD555372       <-- ..................................................
FD548658       --> TGGAAGCATATAAAGTCTATTGGACTAACTGTGTCAAAGGCATCCACAAG
FD559714       --> TGGAAGCATATAAAGTCTATTGGACTAACTGTGTCAAAGGCATCCACAAG
EY914659       --> TGGAAGCATATAAAGTCTATTGGACTAACTGTGTCAAAGGCATCCACAAG
EX762296       --> TGGAAGCATATAAAGTCTATTGGACTAACTGTGTCAAAGGCATCCACAAG
EY923577       --> TGGAAGCATATAAAGTCTATTGGACTAACTGTGTCAAAGGCATCCACAAG

               551    -    601
UN02708        --> GGCCAAATGGTTTTACACCTCGTCGAAGCTATTGATGTGTATCTGGTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766589       <-- GGCCAAATGGTTTTACACCTCGTCGAAGCTATTGATGTGTATCTGGTTGG
FD544809       <-- GGCCAAATGGTTTTACACCTCGTCGAAGCTATTGATGTGTATCTGGTTGG
EY919360       <-- GGCCAAATGGTTTTACACCTCGTCGAAGCTATTGATGTGTATCTGGTTGG
FD555372       <-- ..................................................
FD548658       --> GGCCAAATGGTTTTACACCTCGTCGAAGCTATTGATGTGTATCTGGTTGG
FD559714       --> GGCCAAATGGTTT-ACACCTCGTCGAAGCTATTGATGTGTATCTGGTTGG
EY914659       --> GGCCAAATGGTTTTACACCTCGTCGAAGCTATTGATGTGTATCTGGTTGG
EX762296       --> GGCCAAATGGTTTTACACCTCGTCGAAGCTATTGATGTGTATCTGGTTGG
EY923577       --> GGCCAAATGGTTTTACACCTCGTCGAAGCTATTGATGTGTATCTGGTTGG

               601    -    651
UN02708        --> GACAGTTATGCTAATATTTAGTATGGGTTTGTATGGACTCTTCATCAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766589       <-- GACAGTTATGCTAATATTTAGTATGGGTTTGTATGGACTCTTCATCAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD544809       <-- GACAGTTATGCTAATATTTAGTATGGGTTTGTATGGACTCTTCATCAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY919360       <-- GACAGTTATGCTAATATTCAGTATGGGTTTGTATGGACTCTTCATCAGCA  Raphanus raphanistrum subsp. landra
FD555372       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD548658       --> GACAGTTATGCTAATATTTAGTATGGGTTTGTATGGACTCTTCATCAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD559714       --> GACAGTTATGCTAATATTCAGTATGGGTTTGTATGGACTCTTCATCAGCA  Raphanus raphanistrum subsp. landra
EY914659       --> GACAGTTATGCTAATATTTAGTATGGGTTTGTATGGACTCTTCATCAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX762296       --> GACAGTTATGCTAATATTTAGTATGGGTTTGTATGGACTCTTCATCAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY923577       --> GACAGTTATGCTAATATTCAGTATGGGTTTGTATGGACTCTTCATCAGCA  Raphanus raphanistrum subsp. landra

               651    -    701
UN02708        --> ACTCCTCTCCTGATGTCCCTGCTGAATCCGACCGTGCCCTCAAAGCCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766589       <-- ACTCCTCTCCTGATGTCCCTGCTGAATCCGACCGTGCCCTCAAAGCCTCT
FD544809       <-- ACTCCTCTCCTGATGTCCCTGCTGAATCCGACCGTGCCCTCAAAGCCTCT
EY919360       <-- ACTCCTCTCCTGATGTCCCTGCTGAATCCGACCGTGCCCTCAAAGCCTCT
FD555372       <-- ...............................................TCT
FD548658       --> ACTCCTCTCCTGATGTCCCTGCTGAATCCGACCGTGCCCTCAAAGCCTCT
FD559714       --> ACTCCTCTCCTGATGTCCCTGCTGAATCCGACCGTGCCCTCAAAGCCTCT
EY914659       --> ACTCCTCTCCTGATGTCCCTGCTGAATCCGACCGTGCCCTCAAAGCCTCT
EX762296       --> ACTCCTCTCCTGATGTCCCTGCTGAATCCGACCGTGCCCTCAAAGCCTCT
EY923577       --> ACTCCTCTCCTGATGTCCCTGCTGAATCCGACCGTGCCCTCAAAGCCTCT

               701    -    751
UN02708        --> TCTCTATTCGGAATGTTTGCCATGAAGGAGAGACCGAAATGGATGAAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766589       <-- TCTCTATTCGGAATGTTTGCCATGAAGGAGAGACCGAAATGGATGAAGAT
FD544809       <-- TCTCTATTCGGAATGTTTGCCATGAAGGAGAGACCGAAATGGATGAAGAT
EY919360       <-- TCTCTATTCGGAATGTTTGCCATGAAGGAGAGACCGAAATGGATGAAGAT
FD555372       <-- TCTCTATTCGGAATGTTTGCCATGAAGGAGAGACCGAAATGGATGAAGAT
FD548658       --> TCTCTATTCGGAATGTTTGCCATGAAGagag...................
FD559714       --> TCTCTATT..........................................
EY914659       --> TCTCTATTCGGAATGTTTGCCATGAAAGAGAGACCGAAATGGATGAAGAT
EX762296       --> TCTCTATTCGGAATGTTTGCCATGAAGGAGAGACCGAAATGGATGAAGAT
EY923577       --> TCTCTATTCGGAATGTTTGCCATGAAAGAGAGACCGAAATGGATGAAGAT

               751    -    801
UN02708        --> CAGCTCACTTGATGAGCTCAAAACCAAAGTTGGACATGTTATCGTCATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766589       <-- CAGCTCACTTGATGAGCTCAAAACCAAAGTTGGACATGTTATCGTCATGA
FD544809       <-- CAGCTCACTTGATGAGCTCAAAACCAAAGTTGGACATGTTATCGTCATGA
EY919360       <-- CAGCCCACTTGATGAGCTCAAAACCAAAGTTGGACATGTTATCGTCATGA
FD555372       <-- CAGCTCACTTGATGAGCTCAAAACCAAAGTTGGACATGTTATCGTCATGA
FD548658       --> ..................................................
FD559714       --> ..................................................
EY914659       --> CAGCTCACTTGATGAGCTCAAAACCAAAGTTGGACATGTTATTGTCATGA
EX762296       --> CAGCTCACTTGATGAGCTCAAAACCAAAGTTGGACATGTTATCGTCATGA
EY923577       --> CAGCCCACTTGATGAGCTCAAAACCAAAGTTGGACATGTTATCGTCATGA

               801    -    851
UN02708        --> TCCTTCTGGTGAAGATGTTCGAGAGAAGCAAGATGGTTACCATCGCCACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766589       <-- TCCTTCTGGTGAAGATGTTCGAGAGAAGCAAGATGGTTACCATCGCCACT
FD544809       <-- TCCTTCTGGTGAAGATGTTCGAGAGAAGCAAGATGGTTACCATCGCCACT
EY919360       <-- TCCTTCTGGTGAAGATGTTCGAGAGAAGCAAGATGGTTACCATCGCCACT
FD555372       <-- TCCTTCTGGTGAAGATGTTCGAGAGAAGCAAGATGGTTACCATCGCCACT
FD548658       --> ..................................................
FD559714       --> ..................................................
EY914659       --> TCCTT.............................................
EX762296       --> TCCTTCTGGTGAAGATGTTCGAGAGAAGCAAGATGGT-ACCATCGCCACT
EY923577       --> TCCTTCTGGTGAAGATGTTCGAGAGA-GCAAGATGGTTACCATCGCCACT

               851    -    901
UN02708        --> GGACTTGATCTGCTAAGCTATTCCGTTTGCATTTTCTTGTCCTCTGCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766589       <-- GGACTTGATTTGCTAAGCTATTCCGTTTGCATTTTCTTGTCCTCTGCTTC
FD544809       <-- GGACTTGATCTGCTAAGCTATTCCGTTTGCATTTTCTTGTCCTCTGCTTC
EY919360       <-- GGACTTGATCTGCTAAGCTATTCCGTTTGCATTTTCTTGTCCTCTGCTTC
FD555372       <-- GGACTTGATCTGCTAAGCTATTCCGTTTGCATTTTCTTGTCCTCTGCTTC
FD548658       --> ..................................................
FD559714       --> ..................................................
EY914659       --> ..................................................
EX762296       --> GGACTgatc.........................................
EY923577       --> GGACTTGATCTGCTAAGCTATTCCGTTTGCATTT-CTTGTCCTCTG....

               901    -    951
UN02708        --> TCTCTATATCCTCCACAACCTCCACAAAGGAGAGCACTGAGTGTATTATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766589       <-- TCTCTATATCCTCCACAACCTCCACAAAGGAGAGCACTGAGTGTATTATT
FD544809       <-- TCTCTATATCCTCCACAACCTCCACAAAGGAGAGCACTGAGTGTATTATT
EY919360       <-- TCTCTATACCCTCCACAACCTCCACAAAGGAGAGCACTGAGTGTATTATT
FD555372       <-- TCTCTATATCCTCCACAACCTCCACAAAGGAGAGCACTGAGTGTATTATT
FD548658       --> ..................................................
FD559714       --> ..................................................
EY914659       --> ..................................................
EX762296       --> ..................................................
EY923577       --> ..................................................

               951    -   1001
UN02708        --> TGTACAGAACCAAATCCAATATAAAAGTTTAAGCTTCTGTATATTTGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766589       <-- TGTACAGAACCAAATCCAATATAAAAGTTTAAGCTTCTGTAT........
FD544809       <-- TGTACAGAACCAAATCCAATATAAAAGTTTAAGCTTCTGTAT........
EY919360       <-- TGTACAGAGCCAAATCCAATATAAAAGTTTAAGCTTCTGTATATTTGAAC
FD555372       <-- TGTACAGAACCAAATCCAATATAAAAGTTTAAGCc...............
FD548658       --> ..................................................
FD559714       --> ..................................................
EY914659       --> ..................................................
EX762296       --> ..................................................
EY923577       --> ..................................................

               1001   -   1051
UN02708        --> AACCAATGTTCTTTGTTTATTATGATCATTCGCTAGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX766589       <-- .......................................
FD544809       <-- .......................................
EY919360       <-- AACCAATGTTCTTTGTTTATTATGATCATTCGCTAGAGG
FD555372       <-- .......................................
FD548658       --> .......................................
FD559714       --> .......................................
EY914659       --> .......................................
EX762296       --> .......................................
EY923577       --> .......................................