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Alignment for radish unigene UN03029

               -3     -     47
UN03029        --> ....GGACTTCACAACTATTCCATAATCCTTGTTCTTCCTGCCAATCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901349       <-- ..................................................
FD974437       <-- ..................................................
FD961705       <-- ..................................................
EY894714       <-- ..................................................
EY918983       <-- ..................................................
EW730640       <-- ..................................................
EX895595       --> ....GGACTTCACAACTATTCCATAATCCTTGTTCTTCCTGCCAATCAAA
EY904757       --> ....GGAATTCACAACTATTCCATAATCCTTGTTCTTCCTGCCAATCGAA
EY923155       --> ....GGACTTCACAACTATTCCATAATCCTTGTTCTTCCTGCCAATCAAA
FD980849       --> .....GACTTCACAACTATTCCATAATCCTTGTTCTTCCTGCCAATCAAA
FD978129       --> ggtcctACTTCACAACTATTCCATAATCCTTGTTCTTCCTGCCAATCGAA
FD966167       --> ..................................................
FD939342       --> ..................................................
EV537692       --> ..................................................

               47     -     97
UN03029        --> AATATGGGTGACAAACTTCGATTATCCATCGGAATCTTGGGAAATGGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901349       <-- ..................................................
FD974437       <-- ..................................................
FD961705       <-- ..................................................
EY894714       <-- ..................................................
EY918983       <-- ..................................................
EW730640       <-- ..................................................
EX895595       --> AATATGGGTGACAAACTTCGATTATCCATCGGAATCTTGGGAAATGGAGC
EY904757       --> AATATGGGTGACAAACTTCGATTATCCATCGGAATCTTGGGAAATGGAGC
EY923155       --> AATATGGGTGACAAACTTCGATTATCCATCGGAATCTTGGGAAATGGAGC
FD980849       --> AATATGGGTGACAAACTTCGATTATCCATCGGAATCTTGGGAAATGGAGC
FD978129       --> AATATGGGTGACAAACTTCGATTATCCATCGGAATCTTGGGAAATGGAGC
FD966167       --> ..........................................gATGGAGC
FD939342       --> ..................................................
EV537692       --> ..................................................

               97     -    147
UN03029        --> TTCCATGCTGCTCTATACCGCTCCAATATTAACATTTTCAAGGGTGTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901349       <-- ..................................................
FD974437       <-- ..................................................
FD961705       <-- ..................................................
EY894714       <-- ..................................................
EY918983       <-- ..................................................
EW730640       <-- ..................................................
EX895595       --> TTCCATGCTGCTCTATACCGCTCCAATATTAACATTTTCAAGGGTGTTTA
EY904757       --> TTCCATGCTGCTCTATACCGCTCCAATATTAACATTTTCAAGGGTGTTTA
EY923155       --> TTCCATGCTGCTCTATACCGCTCCAATATTAACATTTTCAAGGGTGTTTA
FD980849       --> TTCCATGCTGCTCTATACCGCTCCAATATTAACATTTTCAAGGGTGTTTA
FD978129       --> TTCCATGCTGCTCTATACCGCTCCAATATTAACATTTTCAAGGGTGTTTA
FD966167       --> TTCCATGCTGCTCTATACCGCTCCAATATTAACATTTTCAAGGGTGTTTA
FD939342       --> ..................................................
EV537692       --> ..................................................

               147    -    197
UN03029        --> AGAAGAAAAGCACAGAGGAATTCTCATGTTTTCCTTACGTTATGACACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901349       <-- ..................................................
FD974437       <-- ..................................................
FD961705       <-- ..................................................
EY894714       <-- ..................................................
EY918983       <-- ..................................................
EW730640       <-- ..................................................
EX895595       --> AGAAGAAAAGCACAGAGGAATTCTCATGTTTCCCTTACGTTATGACACTC
EY904757       --> AGAAGAAAAGCACAGAGGAATTCTCATGTTTTCCTTACGTTATGACACTC
EY923155       --> AGAAGAAAAGCACAGAGGAATTCTCATGTTTTCCTTACGTTATGACACTC
FD980849       --> AGAAGAAAAGCACAGAGGAATTCTCATGTTTTCCTTACGTTATGACACTC
FD978129       --> AGAAGAAAAGCACAGAGGAATTCTCATGTTTTCCTTACGTTATGACACTC
FD966167       --> AGAAGAAAAGCACAGAGGAATTCTCATGTTTTCCTTACGTTATGACACTC
FD939342       --> .....................gCTCATGTTTTCCTTACGTTATGACACTC
EV537692       --> ..................................................

               197    -    247
UN03029        --> TTAAACTGTTTGATTTACACTTGGTATGGCTTACCGATTGTGAGTCATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901349       <-- .........................ATGGCTTACCGATTGTGAGTCATCT
FD974437       <-- ..................................................
FD961705       <-- ..................................................
EY894714       <-- ..................................................
EY918983       <-- ..................................................
EW730640       <-- ..................................................
EX895595       --> TTAAACTGTTTGATTTACACTTGGTATGGCTTACCGATTGTGAGTCATCT
EY904757       --> TTAAACTGTTTGATTTACACTTGGTATGGCTTACCGATTGTGAGTCATCT
EY923155       --> TTAAACTGTTTGATTTACACTTGGTATGGCTTACCGATTG--AGTCATCT
FD980849       --> TTAAACTGTTTGATTTACACTTGGTATGGCTTACCGATTGTGAGTCATCT
FD978129       --> TTAAACTGTTTGATTTACACTTGGTATGGCTTACCGATTGTGAGTCATCT
FD966167       --> TTAAACTGTTTGATTTACACTTGGTATGGCTTACCGATTGTGAGTCATCT
FD939342       --> TTAAACTGTTTGATTTACACTTGGTATGGCCTACCGATTGTGAGTCATCT
EV537692       --> ..................................................

               247    -    297
UN03029        --> TTGGGAGAATCTTCCTCTCGTCACCATCAATGGAGTCGGCATCCTTCTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901349       <-- TTGGGAGAATCTTCCTCTCGTCACCATCAATGGAGTAGGCATCCTTCTCG
FD974437       <-- ..................................................
FD961705       <-- ..................................................
EY894714       <-- ..................................................
EY918983       <-- ..................................................
EW730640       <-- ..................................................
EX895595       --> TTGGGAGAATCTTCCTCTCGTCACCATCAATGGAGTC.............
EY904757       --> TTGGGAGAATCTTCCTCTCGTCACCATCAATGGAGTAGGCATCCTTCTCG
EY923155       --> TTGGGAGAATCTTCCTCTCGTCACCATCAATGGAGTCGGCATCCTTCTCG
FD980849       --> TTGGGAGAATCTTCCTCTCGTCACCATCAATGGAGTCGGCATCCTTCTCT
FD978129       --> TTGGGAGAATCTTCCTCTCGTCACCATCAATGGAGTGGGCATCCTTCTCG
FD966167       --> TTGGGAGAATCTTCCTCTCGTCACCATCAATGGAGTCGGCATCCTTCTCG
FD939342       --> TTGGGAGAATCTTTCTCTCGTCACCATCAATGGAGTCGGCATCCTTCTCG
EV537692       --> TTGGGAGAATCTTCCTCTCGTCACCATCAATGGAGTAGGCATCCTTCTCG

               297    -    347
UN03029        --> AATTACTCTTCATTTTCATATATTTCTGCTACGCGTCGCCCAAAGAAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901349       <-- AATTACTCTTCATTTTCATATATTTCTGCTACGCGTCGCCCAAAGAAAAG
FD974437       <-- ....................TATTTCTGCTACGCGTCGCCCAAAGAAAAG
FD961705       <-- ..................................................
EY894714       <-- ..................................................
EY918983       <-- ..................................................
EW730640       <-- ..................................................
EX895595       --> ..................................................
EY904757       --> AATTACTCTTCATTTTCATATATTTCTGCTACGCGTCGCCCAAAGAAAAG
EY923155       --> AATTACTCTTCATTTTCATATATTTCTGCTACGCGTCGCCCAAAGAAAAG
FD980849       --> AATTACTCTTCATTTTCATATATTTCTGCTACGCGTCGCCCAAAGAAAAG
FD978129       --> AATTACTCTTCATTTTCATATATTTCTGCTACGCGTCGCCCAAAGAAAAG
FD966167       --> AATTACTCTTCATTTTCATATATTTCTGCTACGCGTCGCCCAAAGAAAAG
FD939342       --> AATTACTCTTCATTTTCATATATTTCTGCTACGCGTCGCCCAAAGAAAAG
EV537692       --> AATTACTCTTCATTTTCATATATTTCTGCTACGCGTCGCCCAAAGAAAAG

               347    -    397
UN03029        --> GTTAAGGTTGGTGTTATATTTGTTCCGGTGGTGATCGTTTTGTTCGGGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901349       <-- GTTAAGGTTGGTGTTATATTTGTTCCGGTGGTGATCGTTTTGTTCGGGGT
FD974437       <-- GTTAAGGTTGGTGTTATATTTGTTCCGGTGGTGATCGTTTTGTTCGGGGT
FD961705       <-- ..................................................
EY894714       <-- ..................................................
EY918983       <-- ..................................................
EW730640       <-- ..................................................
EX895595       --> ..................................................
EY904757       --> GTTAAGGTTGGTGTTATATTTGTTCCGGTGGTGATCGTTTTGTTCGGGGT
EY923155       --> GTTAAGGTTGGTCTTATATTTGTTCCGGTGGTGATCGTTTTGTTCGGGGT
FD980849       --> GTTAAGGTTGGTCTTATATTTGTTCCGGTGGTGATCGTTTTGTTCGGGGT
FD978129       --> GTTAAGGTTGGTGTTATATTTGTTCCGGTGGTGATCGTTTTGTTCGGGGT
FD966167       --> GTTAAGGTTGGTCTTATATTTGTTCCGGTGGTGATCGTTTTGTTCGGGGT
FD939342       --> GTTAAGGTTGGTCTTATATTTGTTCCGGTGGTGATCGTTTTGTTCGGGGT
EV537692       --> GTTAAGGTTGGTGTTATATTTGTTCCGGTGGTGATCGTTTTGTTCGGGGT

               397    -    447
UN03029        --> AACGGCTGTAATCTCAGCCGTAGTGTTTGACGATCACCGTCACCGGAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901349       <-- AACGGCTGTAATCTCAGCCGTAGTGTTTGACGATCACCGTCACCGGAAAT
FD974437       <-- AACGGCTGTAATCTCAGCCGTAGTGTTTGACGATCACCGTCACCGGAAAT
FD961705       <-- ..............CAGCCGTAGTGTTTGACGATCACCGTCACCGGAAAT
EY894714       <-- .....................AGTGTTTGACGATCACCGTCACCGGAAAT
EY918983       <-- ..................................................
EW730640       <-- ..................................................
EX895595       --> ..................................................
EY904757       --> AACGGCTGTAATCTCAGCCGTAGTGTTTGACGATCACCGTCACCGGAAAT
EY923155       --> AACGGCTTTAATCTCAGCCGTAGTGTTTGACGATCACCGTCACCGGAAAT
FD980849       --> AACGGCTTTAATCTCAGCCGTAGTGTTTGACGATCACCGTCACCGGAAAT
FD978129       --> AACGGCTGTAATCTCAGCCGTAGTGTTTGACGATCACCGTCACCGGAAAT
FD966167       --> AACGGCTTTAATCTCAGCCGTAGTGTTTGACGATCACCGTCACCGGAAAT
FD939342       --> AACGGCTTTAATCTCAGCCGTAGTGTTTGACGATCACCGTCACCGGAAAT
EV537692       --> AACGGCTGTAATCTCAGCCGTATTGTTTGACGATCACCGTCACCGGAAAT

               447    -    497
UN03029        --> CATTTGTCGGAAGTGTCGGCCTCGTGGCTTCTATCTCCATGTATGGTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901349       <-- CATTTGTCGGAAGTGTCGGCCTCGTGGCTTCTATCTCCATGTATGGTTCT
FD974437       <-- CATTTGTCGGAAGTGTCGGCCTCGTGTCTTCTATCTCCATGTATGGTTCT
FD961705       <-- CATTTGTCGGAAGTGTCGGCCTCGTGGCTTCTATCTCCATGTATGGTTCT
EY894714       <-- CATTTGTCGGAAGTGTCGGCCTCGTGGCTTCTATCTCCATGTATGGTTCT
EY918983       <-- .................GGCCTCGTGGCTTCTATCTCCATGTATGGTTCT
EW730640       <-- ..................................CTCCATGTATGGTTCT
EX895595       --> ..................................................
EY904757       --> CATTTGTCGGAAGTGTCGGCCTCGTGGCTTCTATCTCCATGTATGGTTCT
EY923155       --> CATTTGTCGGAAGTGTCGGCCTCGTGGCTTCTATCTCCATGTATGGTTCT
FD980849       --> CATTTGTCGGAAGTGTCGGCCTCGTGGCTTCTATCTCCATGTATGGTTCT
FD978129       --> CATTTGTCGGAAGTGTCGGCCTCGTGTCTTCTATCTCCATGTATGGTTCT
FD966167       --> CATTTGTCGGAAGTGTCGGCCTCGTGGCTTCTATCTCCATGTATGGTTCT
FD939342       --> CATTTGTCGGAAGTGTCGGCCTCGTGGCTTCTATCTCCATGTATGGTTCT
EV537692       --> CATTTGTCGGAAGTGTCGGCCTCGTGGCTTCTATCTCCATGTATGGTTCT

               497    -    547
UN03029        --> CCTCTCGTCGTTATGAAAAAAGTGATAGAGACAAAAAGTGTGGAGTACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901349       <-- CCTCTCGTCGTTATGAAAAAAGTGATAGAGACAAGAAGTGTGGAGTACAT
FD974437       <-- CCTCTCGTCGTTATGAAAAAAGTGATAGAGACAAAAAGTGTGGAGTACAT
FD961705       <-- CCTCTCGTCGTTATGAAAAAAGTGATAGAGACAAAAAGTGTGGAGTACAT
EY894714       <-- CCTCTCGTCGTTATGAAAAAAGTGATAGAGACAAAAAGTGTGGAGTACAT
EY918983       <-- CCTCTCGTCGTTATGAAAAAAGTGATAGAGACAAAAAGTGTGGAGTACAT
EW730640       <-- CCTCTCGTCGTTATGAAAAAAGTGATAGAGACAAAAAGTGTGGAGTACAT
EX895595       --> ..................................................
EY904757       --> CCTCTCGTCGTTATGAAAAAAGTGATAGAGACAAGAAGTGTGGAGTACAT
EY923155       --> CCTCTCGTCGTTATGAAAAAAGTGATAGAGACAAAAAGTGTGGAGTACAT
FD980849       --> CCTCTCGTCGTTATGAAAAAAGTGATAGAGACAAAAAGTGTGGAGTACAT
FD978129       --> CCTCTCGTCGTTATGAAAAAAGTGATAGAGACAAAAAGTGTGGAGTACAT
FD966167       --> CCTCTCGTCGTTATGAAAAAAGTGATAGAGACAAAAAGTGTGGAGTACAT
FD939342       --> CCTCTCGTCGTTATGAAAAAAGTGATAGAGACAAAAAGTGTGGAGTACAT
EV537692       --> CCTCTCGTCGTTATGAAAAAAGTGATAGAGAC..................

               547    -    597
UN03029        --> GCCATTTTACTTGTCATTCTTTTCATTTCTGGCAAGCTCCCTTTGGCTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901349       <-- GCCATTTTACTTGTCATTCTTTTCATTTCTGGCAAGCTCCCTTTGGCTGG
FD974437       <-- GCCATTTTACTTGTCATTCTTTTCATTTCTGGCAAGCTCCCTTTGGCTGG
FD961705       <-- GCCATTTTACTTGTCATTCTTTTCATTTCTGGCAAGCTCCCTTTGGCTGG
EY894714       <-- GCCATTTTACTTGTCATTCTTTTCATTTCTGGCAAGCTCCCTTTGGCTGG
EY918983       <-- GCCATTTTACTTGTCATTCTTTTCATTTCTGGCAAGCTCCCTTTGGCTGG
EW730640       <-- GCCATTTTACTTGTCATTCTTTTCATTTCTGGCAAGCTCCCTTTGGCTGG
EX895595       --> ..................................................
EY904757       --> GCCATTTTACTTGTCATTCTTTTCATTTCTGGCAAGCTCCCTTTGGCTGG
EY923155       --> GCCATTTTACTTGTCATTCTTTTCATTTCTGGCAAGCTCCCTTTGGCTGG
FD980849       --> GCCATTTTACTTGTCATTCTTTTCATTTCTGGCAAGCTCCCTTTGGCTGG
FD978129       --> GCCATTTTACTTGTCATTCTTTTCATTTCTGGCAAGCTCCCTTTGGCTGG
FD966167       --> GCCATTTTACTTGTCATTCTTTTCATTTCTGGCAAGCTCCCTTTGGCTGG
FD939342       --> GCCATTTTACTTGTCATTCTTTTCATTTCTGGCAAGCTCCCTTTGGCTGG
EV537692       --> ..................................................

               597    -    647
UN03029        --> CCTATGGTTTACTCAGCCATGATCTCTTTCTTGCGTCACCTAATATGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901349       <-- CCTATGGTTTACTCAGCCATGATCTCTTTCTTGCGTCACCTAATATGGTG
FD974437       <-- CCTATGGTTTATTCAGCCATGATCTCTTTCTTGCGTCACCTAATATGGTG
FD961705       <-- CCTATGGTTTATTCAGCCATGATCTCTTTCTTGCGTCACCTAATATGGTG
EY894714       <-- CCTATGGTTTACTCAGCCATGATCTCTTTCTTGCGTCACCTAATATGGTG
EY918983       <-- CCTATGGTTTACTCAGCCATGATCTCTTTCTTGCGTCACCTAATATGGTG
EW730640       <-- CCTATGGTTTACTCAGCCATGATCTCTTTCTTGCGTCACCTAATATGGTG
EX895595       --> ..................................................
EY904757       --> CCTATGGTTTACTCAGCCATGATCTCTTTCTTGCGTCACC..........
EY923155       --> CCTATGGTTTACTCAGCCATGATCTCTTTCTTGCGTCAC-TAATATGGTG
FD980849       --> CCTATGGTTTACTCAGCCATGATCTCTTTCTTGCGTCACCTAATATGGTG
FD978129       --> CCTATGGTTTACTCAGCCATGATCTCTTTCTTGCGTCACCTAATATGGTG
FD966167       --> CCTATGGTTTACTCAGCCATGATCTCTTTCTTGCGTCACCTAATATGGTG
FD939342       --> CCTATGGTTTACTCAGCCATGATCTCTTTCTTGCGTCACCTAATATGGTG
EV537692       --> ..................................................

               647    -    697
UN03029        --> GGGACTCCACTGGGGATTCTCCAACTTATCCTCTACTTTAAGTACAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901349       <-- GGGACTCCACTGGGGATTCTCCAACTTATCCTCTACTTTAAGTACAAGAA
FD974437       <-- GGGACTCCACTGGGGATTCTCCAACTTATCCTCTACTTTAAGTACAAGAA
FD961705       <-- GGGACTCCACTGGGGATTCTCCAACTTATCCTCTACTTTAAGTACAAGAA
EY894714       <-- GGGACTCCACTGGGGATTCTCCAACTTATCCTCTACTTTAAGTACAAGAA
EY918983       <-- GGGACTCCACTGGGGATTTTCCAACTTATCCTTTACTTTAAGTACAAGAA
EW730640       <-- GGGACTCCACTGGGGATTCTCCAACTTATCCTCTACTTTAAGTACAAGAA
EX895595       --> ..................................................
EY904757       --> ..................................................
EY923155       --> GGGACTCCACTGGGGATTCTCCAACTTATCCTCTACTTTAAGTACA-GAA
FD980849       --> GGGACTCCACTGGGGATTCTCCAACTTATCCTCTACTTTAAGTACAg...
FD978129       --> GGGACTCCACTGGGGATTCTCCAACTTATCCTCTACTTTAAGTACA-GAA
FD966167       --> GGGACTCCACTGGGGATTCTCCAACTTATCCTCTACTTTAAGTACAAGAA
FD939342       --> GGGACTCCACTGGGGATTCTCCAACTTATCCTCTACTTTAAGTACAAGAA
EV537692       --> ..................................................

               697    -    747
UN03029        --> CAAGGAGGCACTGATTACAAAAACAGTGATGAGCAAATCGGATGATGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901349       <-- CAATGAGGCACTGATTACAAAAACAGTGATGAGCAAATCGGATGATGAGA
FD974437       <-- CAAGGAGGCACTGATTACAAAAACAGTGATGAGCAAATCGGATGATGAGA
FD961705       <-- CAAGGAGGCACTGATTACAAAAACAGTGATGAGCAAATCGGATGATGAGA
EY894714       <-- CAAGGAGGCACTGATTACAAAAACAGTGATGAGCAAATCGGATGATGAGA
EY918983       <-- CAAGGAGGCACTGATTACAAAAACAGTGATGAGCAAATCGGATGATGAGA
EW730640       <-- CAAGGAGGCACTGATTACAAAAACAGTGATGAGCAAATCGGATGATGAGA
EX895595       --> ..................................................
EY904757       --> ..................................................
EY923155       --> CAAG-AGGCACTGAT-ACAAAA-CAGTGATGAGCAAATCGGATGATGAGA
FD980849       --> ..................................................
FD978129       --> CAAG-AGGCACTGAT-ACAAAA-CAGTGATGAGCAAATCGGATGATGAGA
FD966167       --> CAAGGAGGCA........................................
FD939342       --> CAAGGAGGCACTGATTACAAAAACAGTGATGAGCAAATCGGATGATGAGA
EV537692       --> ..................................................

               747    -    797
UN03029        --> AGAACAAGAGATCACTCGAGCTTGTAGTTGATGTTGATCATGACGGTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901349       <-- AGAACAAGAGATCACTCGAGCTTGTAGTTGATGTTGATCATGACGGTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD974437       <-- AGAACAAGAGATCACTCGAGCTTGTAGTTGATGTTGATCATGACGGTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD961705       <-- AGAACAAGGGATCACTCGAGCTTGTAGTTGATGTTGATCATGACGGTGAT  Raphanus raphanistrum subsp. maritimus
EY894714       <-- AGAACAAGGGATCACTCGAGCTTGTAGTTGATGTTGATCATGACGGTGAT  Raphanus raphanistrum subsp. maritimus
EY918983       <-- AGAACAAGGGATCACTCGAGCTTGTAGTTGATGTTGATCATGACGGTGAT  Raphanus raphanistrum subsp. landra
EW730640       <-- AGAACAAGAGATCACTCGAGCTTGTAGTTGATGTTGATCATGACGGTGAT  Raphanus sativus cv Early Scarlet Globe
EX895595       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY904757       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY923155       --> g.................................................  Raphanus raphanistrum subsp. landra
FD980849       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD978129       --> AGA-CAAGA.........................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD966167       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD939342       --> AGAACAAGAGATCACTCGAGCTTGTAGTTGATGTTGATCATGACGGTGAT  Raphanus sativus var. oleiformis
EV537692       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               797    -    847
UN03029        --> GCCAATGAGAAGAAGTTCAACAACGCATGTTAGTTTCTCCCTCCCCAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901349       <-- GCCAATGAGAAGAAGTTTAACAACGCATGTTAGTTTCTCCCTCCCCAAAA
FD974437       <-- GCCAATGAGAAGAAGTTCAACAACGCATGTTAGTTTCTCCCTCCCCAAAA
FD961705       <-- GCCAATGAGAAGAAGTTCAACAACGCATGTTAGTTTCTCCCTCCCCAAAA
EY894714       <-- GCCAATGAGAAGAAGTTCAACAACGCATGTTAGTTTCTCCCTCCCCAAAA
EY918983       <-- GCCAATGAGAAGAAGTTCAACAACGCATGTTAGTTTCTCCCTCCCCAAAA
EW730640       <-- GCCAATGAGAAGAAGTTCAACAACGCATGTTAGTTTCTCCCTCCCCAAAA
EX895595       --> ..................................................
EY904757       --> ..................................................
EY923155       --> ..................................................
FD980849       --> ..................................................
FD978129       --> ..................................................
FD966167       --> ..................................................
FD939342       --> GCCAATGAGAAGAAGTTCAACAACGCATGTTAGTTT..............
EV537692       --> ..................................................

               847    -    897
UN03029        --> ACTCCATGTGAATCCAGAGATTTAATGTAAACTTGAAGGTCTCGTGGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901349       <-- ACTCCATGTGAATCTAGAGATTTAGTGTAAACTTGAAGGTCTCGTGGGAT
FD974437       <-- ACTCCATGTGAATCCAGAGATTTAGTGTAAACTTGAGGGTCTCGTGGGAT
FD961705       <-- ACTCCATGTGAATCCAGAGATTTAATGTAAACTTGAAGGTCTCGTGGGAT
EY894714       <-- ACTCCATGTGAATCCAGAGATTTAATGTAAACTTGAAGGTCTCGTGGGAT
EY918983       <-- ACTCCATGTGAATCCAGAGATTTAATGTAAACTTGAAGGTCTCGTGGGAT
EW730640       <-- ATTCCATGTGAATCCAGAGATTTAATGTAAACTTGAAGGTCTCGTGGGAT
EX895595       --> ..................................................
EY904757       --> ..................................................
EY923155       --> ..................................................
FD980849       --> ..................................................
FD978129       --> ..................................................
FD966167       --> ..................................................
FD939342       --> ..................................................
EV537692       --> ..................................................

               897    -    947
UN03029        --> TCTGCTTTCACTACATGATGTTTTATCTCTATTGTGTATCATGTGAATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901349       <-- TCTGCTTTCATTACATGATGTTTTATCTCTATTGTGTATCATGTGAATAA
FD974437       <-- TCTGCTTTCATTACATGATGTTTTATCTCTATTGTGTATCATGTGAATAA
FD961705       <-- TCTGCTTTCACTACATGATGTTTTATCTCTATTGTGTATCATGTGAATAA
EY894714       <-- TCTGCTTTCACTACATGATGTTTTATCTCTATTGTGTATCATGTGAATAA
EY918983       <-- TCTGCTTTCACTACATGATGTTTTATCTCTATTGTGTATCATGTGAATAA
EW730640       <-- TCTGCTTTCACTACATGATGTTTTATCTCTATTGTGTATCATGTGAATAA
EX895595       --> ..................................................
EY904757       --> ..................................................
EY923155       --> ..................................................
FD980849       --> ..................................................
FD978129       --> ..................................................
FD966167       --> ..................................................
FD939342       --> ..................................................
EV537692       --> ..................................................

               947    -    997
UN03029        --> AACACTCGACGACAAAATATCCAATGTGTCTACCAAAAGGAGCAAAAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901349       <-- AGCACTCGACGACt....................................
FD974437       <-- AGCACTCGACGAC.....................................
FD961705       <-- AACACTCGACGAC.....................................
EY894714       <-- AACACTCGACGACAAAATATCCAATGTGTCTACCAAAAGGAGCAAAAGTA
EY918983       <-- AACACTCGACGACAAAATATCCAATGTGTCTACCAAAAGGAGCAAAAGTA
EW730640       <-- AACACTCGACGACAAGATATCCAATGTGTCTACCAAAAGGAGCAAAAGTA
EX895595       --> ..................................................
EY904757       --> ..................................................
EY923155       --> ..................................................
FD980849       --> ..................................................
FD978129       --> ..................................................
FD966167       --> ..................................................
FD939342       --> ..................................................
EV537692       --> ..................................................

               997    -   1047
UN03029        --> AAGAAAAACAAACGATCAATCGATAGTCTATGATTGATACGATCCAGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901349       <-- ..................................................
FD974437       <-- ..................................................
FD961705       <-- ..................................................
EY894714       <-- AAGAAAAACAAACGATCAATCGATAGTCTATGATTGATACGATCCAGAAC
EY918983       <-- AAGAAAAACAAACGATCAATCGATAGTCTATGATTGATACGATCCAGAAC
EW730640       <-- AAGAAAAACAAACGATCAATCGATAGTCTATGATTGATACGATCCAGAAC
EX895595       --> ..................................................
EY904757       --> ..................................................
EY923155       --> ..................................................
FD980849       --> ..................................................
FD978129       --> ..................................................
FD966167       --> ..................................................
FD939342       --> ..................................................
EV537692       --> ..................................................

               1047   -   1097
UN03029        --> TATTAGCTATTTGTTTATGTAAAATATTATCCAAAGAGTACGTGGAATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901349       <-- ..................................................
FD974437       <-- ..................................................
FD961705       <-- ..................................................
EY894714       <-- TATTAGCTATTTGTTTATGTAAAATATTATCCAAAGAGTACGTGGAATCA
EY918983       <-- TATTAGCTATTTGTTTATGTAAAATATTATCCAAAGAGTACGTGGAATCA
EW730640       <-- TATTAGCTATTTGTTTATGTAAAATATTATCCAAAGAGTACGTGGAATCA
EX895595       --> ..................................................
EY904757       --> ..................................................
EY923155       --> ..................................................
FD980849       --> ..................................................
FD978129       --> ..................................................
FD966167       --> ..................................................
FD939342       --> ..................................................
EV537692       --> ..................................................

               1097   -   1147
UN03029        --> AAGTTTAATCCACAGAAAACAGGATCCCCTTATACTTTATAAGATTTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901349       <-- ..................................................
FD974437       <-- ..................................................
FD961705       <-- ..................................................
EY894714       <-- AAGTTTAATCCACAGAAAACAGGATCCCCTTATACTTTATAAGATTTTTT
EY918983       <-- AAGTTTAATCCACAGAAAGCAGGA..........................
EW730640       <-- AAGTTTAATCCACAGAAAACAGGATCCCCTTATACTTTATAAGATTTTTT
EX895595       --> ..................................................
EY904757       --> ..................................................
EY923155       --> ..................................................
FD980849       --> ..................................................
FD978129       --> ..................................................
FD966167       --> ..................................................
FD939342       --> ..................................................
EV537692       --> ..................................................

               1147   -   1197
UN03029        --> TGTATTATTATTTATCTAATTTTTGAAAAAAATAAGGGAAAATTCTCCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY901349       <-- ..................................................
FD974437       <-- ..................................................
FD961705       <-- ..................................................
EY894714       <-- TGTATT............................................
EY918983       <-- ..................................................
EW730640       <-- TGTATTATTATTTATCTAATTTTTGAAAAAAATAAGGGAAAATTCTCCTA
EX895595       --> ..................................................
EY904757       --> ..................................................
EY923155       --> ..................................................
FD980849       --> ..................................................
FD978129       --> ..................................................
FD966167       --> ..................................................
FD939342       --> ..................................................
EV537692       --> ..................................................

               1197   -   1247
UN03029        --> AAACACT
                   ~~~~~~~
EY901349       <-- .......
FD974437       <-- .......
FD961705       <-- .......
EY894714       <-- .......
EY918983       <-- .......
EW730640       <-- AAACACT
EX895595       --> .......
EY904757       --> .......
EY923155       --> .......
FD980849       --> .......
FD978129       --> .......
FD966167       --> .......
FD939342       --> .......
EV537692       --> .......