1      -     51
UN03261        --> GGGAAATTTAGGGTTTTCGAGTGTTTTCACGCCGTTCATCTTCGTCTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547282       <-- .......ggAGGGTTTTCGAGTGTTTTCACGCCGTTCATTTTCGTCTTCT
EY909431       <-- .........AGGGTTTTCGAGTGTTTTCACGCCGTTCATCTTCGTCTTCT
EY911016       <-- .......ggAGGGTTTTCGAGTGTTTTCACGCCGTTCATCTTCGTCTTCT
EY911562       <-- .........AGGGTTTTCGAGTGTTTTCACGCCGTTCATCTTCGTCTTCT
EY918432       <-- .......ggAGGGTTTTCGAGTGTTTTCACGCCGTTCATCTTCGTCTTCT
EV544151       <-- ........................................TTCGTTTTCT
FD959054       <-- ........................................TTCGTTTTCT
FD982725       <-- ..............................................TTCT
FD958779       <-- ..................................................
FD959123       <-- ..................................................
FD982964       <-- ..................................................
EY930573       --> GGGAAATTTAGGGTTTTCGAGTGTTTTCACGCCGTTCATCTTCGTCTTCT
EV548490       --> .......ggAGGGTTTTCGAGTGTTTTCACGCCGTTCATCTTCGTCTTCT
EV552352       --> .......ggAGGGTTTTCGAGTGTTTTCACGCCGTTCATCTTCGTCTTCT
EX747243       --> .......ggAGGGTTTTCGAGTGTTTTCACGCCGTTCATCTTCGTCTTCT
EY913145       --> .........AGGGTTTTCGAGTGTTTTCACGCCGTTCATCTTCGTCTTCT
EY915099       --> .......ggAGGGTTTTCGAGTGTTTTCACGCCGTTCATCTTCGTCTTCT
EY915786       --> .........AGGGTTTTCGAGTGTTTTCACGCCGTTCATCTTCGTCTTCT
FD962183       --> ......gggAGGGTTTTCGAGTGTTTTCACGCCGTTCATCTTCGTCTTCT
FD962512       --> .......ggAGGGTTTTCGAGTGTTTTCACGCCGTTCATCTTCGTCTTCT
FD986474       --> .......ggAGGGTTTTCGAGTGTTTTCACGCCGTTCATCTTCGTCTTCT
FD962614       --> .............TTTTCGAGTGTTTTCACGCCGTTCATCTTCGTCTTCT
EY922475       --> ..............................GCCGTTCATCTTCGTCTTCT
FD986781       --> ..................................................

               51     -    101
UN03261        --> AGCTTCTCGCACTTGAGCACTCGAAAACCATGGGTTTCGCTGCGATCTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547282       <-- AGCTTCTCGCACTTGAGCACTCGAAAACCATGGGTTTCGCTGCGATCTGG
EY909431       <-- AGCTTCTCGCACTTGAGCACTCGAAAACCATGGGTTTCGCTGCGATCTGG
EY911016       <-- AGCTTCTCGCACTTGAGCACTCGAAAACCATGGGTTTCGCTGCGATCTGG
EY911562       <-- AGCTTCTCGCACTTGAGCACTCGAAAACCATGGGTTTCGCTGCGATCTGG
EY918432       <-- AGCTTCTCGCACTTGAGCACTCGAAAACCATGGGTTTCGCTGCGATCTGG
EV544151       <-- AGCTTCTCGCACTTGAGCACTCGAAAACCATGGGTTTCGCTGCGATCTGG
FD959054       <-- AGCTTCTCGCACTTGAGCACTCGAAAACCATGGGTTTCGCTGCGATCTGG
FD982725       <-- AGCTTTTCGCACTTGAGCACTCGAAAACCATGGGTTTCGCTGCGATCTGG
FD958779       <-- .........................................GCGATCTGG
FD959123       <-- ..................................................
FD982964       <-- ..................................................
EY930573       --> AGCTTCTCGCACTTGAGCACTCGAAAACCATGGGTTTCGCTGCGATCTGG
EV548490       --> AGCTTCTCGCACTTGAGCACTCGAAAACCATGGGTTTCGCTGCGATCTGG
EV552352       --> AGCTTCTCGCACTTGAGCACTCGAAAACCATGGGTTTCGCTGCGATCTGG
EX747243       --> AGCTTCTCGCACTTGAGCACTCGAAAACCATGGGTTTCGCTGCGATCTGG
EY913145       --> AGCTTCTCGCACTTGAGCACTCGAAAACCATGGGTTTCGCTGCGATCTGG
EY915099       --> AGCTTCTCGCACTTGAGCACTCGAAAACCATGGGTTTCGCTGCGATCTGG
EY915786       --> AGCTTCTCGCACTTGAGCACTCGAAAACCATGGGTTTCGCTGCGATCTGG
FD962183       --> AGCTTCTCGCACTTGAGCACTCGAAAACCATGGGTTTCGCTGCGATCTGG
FD962512       --> AGCTTCTCGCACTTGAGCACTCGAAAACCATGGGTTTCGCTGCGATCTGG
FD986474       --> AGCTTCTCGCACTTGAGCACTCGAAAACCATGGGTTTCGCTGCGATCTGG
FD962614       --> AGCTTCTCGCACTTGAGCACTCGAAAACCATGGGTTTCGCTGCGATCTGG
EY922475       --> AGCTTCTCGCACTTGAGCACTCGAAAACCATGGGTTTCGCTGCGATCTGG
FD986781       --> ..................................................

               101    -    151
UN03261        --> AACTCTCATCCCAAGAAGTACGGGCCTGGTTCCCGCACCTGCCGTGTGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547282       <-- AACTCTCATCCCAAGAAGTACGGGCCTGGTTCCCGCACCTGCCGTGTGTG
EY909431       <-- AACTCTCATCCCAAGAAGTACGGGCCTGGTTCCCGCCCCTGCCGTGTGTG
EY911016       <-- AACTCTCATCCCAAGAAGTACGGGCCTGGTTCCCGCACCTGCCGTATGTG
EY911562       <-- AACTCTCATCCCAAGAAGTACGGGCCTGGTTCCCGCCCCTGCCGTGTGTG
EY918432       <-- AACTCTCATCCCAAGAAGTACGGGCCTGGTTCCCGCCCCTGCCGTGTGTG
EV544151       <-- AACTCTCATCCCAAGAAGTACGGGCCTGGTTCCCGCCCCTGCCGTGTGTG
FD959054       <-- AACTCTCATCCCAAGAAGTACGGGCCTGGTTCCCGCCCCTTCCGTGTGTG
FD982725       <-- AACTCTCATCCCAAGAAGTACGGGCCTGGTTCCCGCCCCTGCCGTGTGTG
FD958779       <-- AACTCTCATCCCAAGAAGTACGGGCCTGGTTCCCGCCCCTGCCGTGTGTG
FD959123       <-- .ACTCTCATCCCAAGAAGTACGGGCCTGGTTCCCGCACCTTCCGTGTGTG
FD982964       <-- ..................................................
EY930573       --> AACTCTCATCCCAAGAAGTACGGGCCTGGTTCCCGCACCTGCCGTGTGTG
EV548490       --> AACTCTCATCCCAAGAAGTACGGGCCTGGTTCCCGCACCTGCCGTGTGTG
EV552352       --> AACTCTCATCCCAAGAAGTACGGGCCTGGTTCCCGCACCTGCCGTGTGTG
EX747243       --> AACTCTCATCCCAAGAAGTACGGGCCTGGTTCCCGCACCTGCCGTGTGTG
EY913145       --> AACTCTCATCCCAAGAAGTACGGGCCTGGTTCCCGCACCTGCCGTGTGTG
EY915099       --> AACTCTCATCCCAAGAAGTACGGGCCTGGTTCCCGCACCTGCCGTATGTG
EY915786       --> AACTCTCATCCCAAGAAGTACGGGCCTGGTTCCCGCACCTGCCGTGTGTG
FD962183       --> AACTCTCATCCCAAGAAGTACGGGCCTGGTTCCCGCACCTGCCGTGTGTG
FD962512       --> AACTCTCATCCCAAGAAGTACGGGCCTGGTTCCCGCACCTTCCGTGTGTG
FD986474       --> AACTCTCATCCCAAGAAGTACGGGCCTGGTTCCCGCACCTGCCGTGTGTG
FD962614       --> AACTCTCATCCCAAGAAGTACGGGCCTGGTTCCCGCACCTTCCGTGTGTG
EY922475       --> AACTCTCATCCCAAGAAGTACGGGCCTGGTTCCCGCACCTGCCGTGTGTG
FD986781       --> ..................................................

               151    -    201
UN03261        --> CGGAAACTCGCACGGGCTAATCAGGAAGTATGGACTTAACTGCTGTAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547282       <-- CGGAAACTCGCACGGGCTAATCAGGAAGTATGGACTTAACTGCTGTAGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY909431       <-- CGGAAACTCGCACGGGCTAATCAGGAAGTATGGACTTAACTGCTGTAGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911016       <-- CGGAAACTCGCACGGGCTAATCAGGAAGTATGGACTTAACTGCTGTAGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911562       <-- CGGAAACTCGCACGGGCTAATCAGGAAGTATGGACTTAACTGCTGTAGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY918432       <-- CGGAAACTCACACGGGCTAATCAGGAAGTATGGACTTAACTGCTGTAGAC  Raphanus raphanistrum subsp. landra
EV544151       <-- CGGAAACTCGCACGGGCTAATCAGGAAGTATGGACTTAACTGCTGTAGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD959054       <-- CGGAAACTCGCACGGGCTAATCAGGAAGTATGGACTTAACTGCTGTAGAC  Raphanus raphanistrum subsp. maritimus
FD982725       <-- CGGAAACTCACACGGGCTAATCAGGAAGTATGGACTTAACTGCTGTAGAC  Raphanus raphanistrum subsp. landra
FD958779       <-- CGGAAACTCGCACGGGCTAATCAGGAAGTATGGACTTAACTGCTGTAGAC  Raphanus raphanistrum subsp. maritimus
FD959123       <-- CGGAAACTCGCACGGGCTAATCAGGAAGTATGGACTTAACTGCTGTAGAC  Raphanus raphanistrum subsp. maritimus
FD982964       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY930573       --> CGGAAACTCACACGGGCTAATCAGGAAGTATGGGCTTAACTGCTGTAGAC  Raphanus sativus var. oleiformis
EV548490       --> CGGAAACTCGCACGGGCTAATCAGGAAGTATGGACTTAACTGCTGTAGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV552352       --> CGGAAACTCGCACGGGCTAATCAGGAAGTATGGACTTAACTGCTGTAGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX747243       --> CGGAAACTCGCACGGGCTAATCAGGAAGTATGGACTTAACTGCTGTAGAC  Raphanus raphanistrum subsp. maritimus
EY913145       --> CGGAAACTCGCACGGGCTAATCAGGAAGTATGGACTTAACTGCTGTAGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915099       --> CGGAAACTCGCACGGGCTAATCAGGAAGTATGGACTTAACTGCTGTAGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915786       --> CGGAAACTCGCACGGGCTAATCAGGAAGTATGGACTTAACTGCTGTAGAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD962183       --> CGGAAACTCGCACGGGCTAATCAGGAAGTATGGACTTAACTGCTGTAGAC  Raphanus raphanistrum subsp. maritimus
FD962512       --> CGGAAACTCGCACGGGCTAATCAGGAAGTATGGACTTAACTGCTGTAGAC  Raphanus raphanistrum subsp. maritimus
FD986474       --> CGGAAACTCACACGGGCTAATCAGGAAGTATGGACTTAACTGCTGTAGAC  Raphanus raphanistrum subsp. landra
FD962614       --> CGGAAACTCGCACGGGCTAATCAGGAAGTATGGACTTAACTGCTGTAGAC  Raphanus raphanistrum subsp. maritimus
EY922475       --> CGGAAACTCACACGGGCTAATCAGGAAGTATGGACTTAACTGCTGTAGAC  Raphanus raphanistrum subsp. landra
FD986781       --> ..................................................  Raphanus raphanistrum subsp. landra

               201    -    251
UN03261        --> AGTGCTTCCGCAGCAACGCCAAGGAAATCGGATTCATCAAGTACCGTTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547282       <-- AGTGCTTCCGCAGCAACGCCAAGGAAATCGGATTCATCAAGTACCGTTAA
EY909431       <-- AGTGCTTCCGCAGCAACGCCAAGGAAATCGGATTCATCAAGTACCGTTAA
EY911016       <-- AGTGCTTCCGCAGCAACGCCAAGGAAATCGGATTCATCAAGTACCGTTAA
EY911562       <-- AGTGCTTCCGCAGCAACGCTAAGGAAATCGGATTCATCAAGTACCGTTAA
EY918432       <-- AGTGCTTCCGCAGCAACGCCAAGGAAATCGGATTCATCAAGTACCGTTAA
EV544151       <-- AGTGCTTCCGCAGCAACGCCAAGGAAATCGGATTCATCAAGTACCGTTAA
FD959054       <-- AGTGCTTCCGCAGCAACGCCAAGGAAATCGGATTCATCAAGTACCGTTAA
FD982725       <-- AGTGCTTCCGCAGCAACGCCAAGGAAATCGGATTCATCAAGTACCGTTAA
FD958779       <-- AGTGCTTCCGCAGCAACGCCAAGGAAATCGGATTCATCAAGTACCGTTAA
FD959123       <-- AGTGCTTCCGCAGCAACGCCAAGGAAATCGGATTCATCAAGTACCGTTAA
FD982964       <-- ........gGCAGCAACGCCAAGGAAATCGGATTCATCAAGTACCGTTAA
EY930573       --> AGTGCTTCCGCAGCAACGCCAAGGAAATCGGATTCATCAAGTACCGTTAA
EV548490       --> AGTGCTTCCGCAGCAACGCCAAGGAAATCGGATTCATCAAGTACCGTTAA
EV552352       --> AGTGCTTCCGCAGCAACGCCAAGGAAATCGGATTCATCAAGTACCGTTAA
EX747243       --> AGTGCTTCCGCAGCAACGCCAAGGAAATCGGATTCATCAAGTACCATTAA
EY913145       --> AGTGCTTCCGCAGCAACGCCAAGGAAATCGGATTCATCAAGTACCGTTAA
EY915099       --> AGTGCTTCCGCAGCAACGCCAAGGAAATCGGATTCATCAAGTACCGTTAA
EY915786       --> AGTGCTTCCGCAGCAACGCTAAGGAAATCGGATTCATCAAGTACCGTTAA
FD962183       --> AGTGCTTCCGCAGCAACGCCAAGGAAATCGGATTCATCAAGTACCGTTAA
FD962512       --> AGTGCTTCCGCAGCAACGCCAAGGAAATCGGATTCATCAAGTACCGTTAA
FD986474       --> AGTGCTTCCGCAGCAACGCCAAGGAAATCGGATTCATCAAGTACCGTTAA
FD962614       --> AGTGCTTCCGCAGCAACGCCAAGGAAATCGGATTCATCAAGTACCGTTAA
EY922475       --> AGTGCTTCCGCAGCAACGCCAAGGAAATCGGATTCATCAAGTACCGTTAA
FD986781       --> ........gGCAGCAACGCCAAGGAAATCGGATTCATCAAGTACCGTTAA

               251    -    301
UN03261        --> AGAGCCGGTGTTGCTTATGCAGTCAGTTGCTGTCGTTTGGATTTTTTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547282       <-- AGAGCCGGTGTTGCTTATGCAGTCAGTTGCTGTCGTTTGGATTTTTTTTC
EY909431       <-- AGAGCCGGTGTTGCTTATGCAGTCAGTTGCTGTCGTTTGGATTTTTTTTC
EY911016       <-- AGAGCCGGTGTTGCTTATGCAGTCAGTTGCTGTCGTTTGGATTTTTTTTC
EY911562       <-- AGAGCCGGTGTTGCTTATGCAGTCAGTTGCTGTCGTTTGGATTTTTTTTC
EY918432       <-- AGAGCCGGTGTTGCTTATGCAGTCAGTTGCTGTCGTTTGGATTTTTTTTC
EV544151       <-- AGAGCCGGTGTTGCTTATGCAGTCAGTTGCTGTCGTTTGGATTTTTTTTT
FD959054       <-- AGAGCCGGTGTTGCTTATGCAGTCAGTTGCTGTCGTTTGGATTTTTTTTC
FD982725       <-- AGAGCCGGTGTTGCTTATGCAGTCAGTTGCTGTCGTTTGGATTTTTTTTT
FD958779       <-- AGAGCCGGTGTTGCTTATGCAGTCAGTTGCTGTCGTTTGGATTTTTTTTC
FD959123       <-- AGAGCCGGTGTTGCTTATGCAGTCAGTTGCTGTCGTTTGGATTTTTTTTC
FD982964       <-- AGAGCCGGTGTTGCTTATGCAGTCAGTTGCTGTCGTTTGGATTTTTTTTC
EY930573       --> AGAGCCGGTGTTGCTTATGCAGT----TGCTGTCATTTGGATTTTTTATT
EV548490       --> AGAGCCGGTGTTGCTTATGCAGTCAGTTGCTGTCGTTTGGATTTTTTTTC
EV552352       --> AGAGCCGGTGTTGCTTATGCAGTCAGTTGCTGTCGTTTGGATTTTTTTTC
EX747243       --> AGAGCCGGTGTTGCTTATGCAGTCAGTTGCTGTCGTTTGGATTTTTTTTC
EY913145       --> AGAGCCGGTGTTGCTTATGCAGTCAGTTGCTGTCGTTTGGATTTTTTTTC
EY915099       --> AGAGCCGGTGTTGCTTATGCAGTCAGTTGCTGTCGTTTGGATTTTTTTTC
EY915786       --> AGAGCCGGTGTTGCTTATGCAGTCAGTTGCTGTCGTTTGGATTTTTTTTC
FD962183       --> AGAGCCGGTGTTGCTTATGCAGTCAGTTGCTGTCGTTTGGATTTTTTTTC
FD962512       --> AGAGCCGGTGTTGCTTATGCAGTCAGTTGCTGTCGTTTGGATTTTTTTTC
FD986474       --> AGAGCCGGTGTTGCTTATGCAGTCAGTTGCTGTCGTTTGGATTTTTTTTC
FD962614       --> AGAGCCGGTGTTGCTTATGCAGTCAGTTGCTGTCGTTTGGATTTTTTTTC
EY922475       --> AGAGCCGGTGTTGCTTATGCAGTCAGTTGCTGTCGTTTGGATTTTTTTTC
FD986781       --> AGAGCCGGTGTTGCTTATGCAGTCAGTTGCTGTCGTTTGGATTTTTTTTC

               301    -    351
UN03261        --> TTAAAGCTTTTGAATGTTGTACTGGATCTTATAAATGCTTTATGATTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547282       <-- TTAAAGCTTTTGAATGTTGTACTGGATCTTATAAATGCTTTATGATTTCC
EY909431       <-- TTAAAGCTTTTGAATGTTGTACTGGATCTTATAAATGCTTTATGATTTCC
EY911016       <-- TTAAAGCTTTTGAATGTTGTACTGGATCTTATGAATGCTTTATGATTTCC
EY911562       <-- TTAAAGCTTTTGAATGTTGTACTGGATCTTATAAATGCTTTATGATTTCC
EY918432       <-- TTAAAGCTTTTGAATGTTGTACTGGATCTTATAAATGCTTTATGATTTCC
EV544151       <-- TTAAAGCTTTTGAATGTTGTACTGGATCTTATAAATGCTTTATGATTTCC
FD959054       <-- TTAAAGCTTTTGAATGTTGTACTGGATCTTATAAATGCTTTATGATTTCC
FD982725       <-- TTAAAGCTTTTGAATGTTGTACTGGATTTTATAAATGCTTTATGATTTCC
FD958779       <-- TTAAAGCTTTTGAATGTTGTACTGGATCTTATAAATGCTTTATGATTTCC
FD959123       <-- TTAAAGCTTTTGAATGTTGTACTGGATCTTATAAATGCTTTATGATTTCC
FD982964       <-- TTAAAGCTTTTGAATGTTGTACTGGATCTTATAAATGCTTTATGATTTCC
EY930573       --> TTAAAGCTTTTGAATGTTGTACTGGATCTTATAAATGCTTTATGATTTCC
EV548490       --> TTAAAGCTTTTGAATGTTGTACTGGATCTTATAAATGCTTTATGATTTCC
EV552352       --> TTAAAGCTTTTGAATGTTGTACTGGATCTTATAAATGCTTTATGATTTCC
EX747243       --> TTAAAGCTTTTGAATGTTGTACTGGATCTTATAAATGCTTTATGATTTCC
EY913145       --> TTAAAGCTTTTGAATGTTGTACTGGATCTTATAAATGCTTTATGATTTCC
EY915099       --> TTAAAGCTTTTGAATGTTGTACTGGATCTTATGAATGCTTTATGATTTCC
EY915786       --> TTAAAGCTTTTGAATGTTGTACTGGATCTTATAAATGCTTTATGATTTCC
FD962183       --> TTAAAGCTTTTGAATGTTGTACTGGATCTTATAAATGCTTTATGATTTCC
FD962512       --> TTAAAGCTTTTGAATGTTGTACTGGATCTTATAAATGCTTTATGATTTCC
FD986474       --> TTAAAGCTTTTGAATGTTGTACTGGATCTTATAAATGCTTTATGATTTCC
FD962614       --> TTAAAGCTTTTGAATGTTGTACTGGATCTTATAAATGCTTTATGATTTCC
EY922475       --> TTAAAGCTTTTGAATGTTGTACTGGATCTTATAAATGCTTTATGATTTCC
FD986781       --> TTAAAGCTTTTGAATGTTGTACTGGATCTTATAAATGCTTTATGATTTCC

               351    -    401
UN03261        --> TCGTTGAACAATTGAGCTTTCCTTGTTTTATCAACAATTTTTGGTTCTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547282       <-- TCGTTGAACAATTGAGCTTTCCTTGTTTTATCAACAATTTTTGGTTCTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY909431       <-- TCGTTGAACAATTGAGCTTTCCTTGTTTTATCAACAATTTTTGGTTCTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911016       <-- TCGTTGAACAATTGAGCTTTCCTTGTTTTATCAACAATTTTTGGTTCc..  Raphanus raphanistrum subsp. raphanistrum (NY)
EY911562       <-- TCGTTGAACAATTGAGCTTTCCTTGTTTTATCAACAATTTTTGGTTCTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY918432       <-- TCGTTGAACAATTGAGCTTTCCTTGTTTTATCAACAATTTTTGGTTCTAC  Raphanus raphanistrum subsp. landra
EV544151       <-- TCGTTGAACAATTGAGCTTTCCTTGTTTTATCAACAATTTTTGGTTTTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD959054       <-- TCTTTGAACAATTGAGCTTTCCTTGTTTTATCAACAATTTTTGGTTCTAC  Raphanus raphanistrum subsp. maritimus
FD982725       <-- TCGTTGAACAATTGAGCTTTCCTTGTTTTATCAACAATTTTTGGTTTTAC  Raphanus raphanistrum subsp. landra
FD958779       <-- TCTTTGAACAATTGAGCTTTCCTTGTTTTATCAACAATTTTTGGTTCTAC  Raphanus raphanistrum subsp. maritimus
FD959123       <-- TCTTTGAACAATTGAGCTTTCCTTGTTTTATCAACAATTTTTGGTTCTAC  Raphanus raphanistrum subsp. maritimus
FD982964       <-- TCGTTGAACAATTGAGCTTTCCTTGTTTTATCAACAATTTTTGGTTCTAC  Raphanus raphanistrum subsp. landra
EY930573       --> TCGTTGAACAATTGAGCTTTCCTTGTTTTATCAACAATTTTTGGTTCTAC  Raphanus sativus var. oleiformis
EV548490       --> TCGTTGAACAATTGAGCTTTCCTTGTTTTATCAACAATTTTTGGTTCTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV552352       --> TCGTTGAACAATTGAGCTTTCCTTGTTTTATCAACAATTTTTGGTTCTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX747243       --> TCTTTGAACAATTGAGCTTTCCTTGTTTTATCAACAATTTTTGGTTCTAC  Raphanus raphanistrum subsp. maritimus
EY913145       --> TCGTTGAACAATTGAGCTTTCCTTGTTTTATCAACAATTTTTGGTTCTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915099       --> TCGTTGAACAATTGAGCTTTCCTTGTTTTATCAACAATTTTTGGTTCcaa  Raphanus raphanistrum subsp. raphanistrum (NY)
EY915786       --> TCGTTGAACAATTGAGCTTTCCTTGTTTTATCAACAATTTTTGGTTCTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD962183       --> TCTTTGAACAATTGAGCTTTCCTTGTTTTATCAACAATTTTTGGTTCTAC  Raphanus raphanistrum subsp. maritimus
FD962512       --> TCTTTGAACAATTGAGCTTTCCTTGTTTTATCAACAATTTTTGGTTCTAC  Raphanus raphanistrum subsp. maritimus
FD986474       --> TCGTTGAACAATTGAGCTTTCCTTGTTTTATCAACAATTTTTGGTTCTAC  Raphanus raphanistrum subsp. landra
FD962614       --> TCTTTGAACAATTGAGCTTTCCTTGTTTTATCAACAATTTTTGGTTCTAC  Raphanus raphanistrum subsp. maritimus
EY922475       --> TCGTTGAACAATTGAGCTTTCCTTGTTTTATCAACAATTTTTGGTTCTAC  Raphanus raphanistrum subsp. landra
FD986781       --> TCGTTGAACAATTGAGCTTTCCTTGTTTTATCAACAATTTTTGGTTCTAC  Raphanus raphanistrum subsp. landra

               401    -    451
UN03261        --> TACAATATGATTATCGTTTAAATTTGGAGTTTCTCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547282       <-- TACAATATGATTATCGTTTAAATTTag...........
EY909431       <-- TACAATATGATTATCGTTTAAATT..............
EY911016       <-- ......................................
EY911562       <-- TACAATATGAT...........................
EY918432       <-- TACAATATTATTATCGTTcc..................
EV544151       <-- TACAATATGATTATCG......................
FD959054       <-- TACAATATGATTATCGTTT...................
FD982725       <-- TACA..................................
FD958779       <-- TACAATATGATTATCGTTTAAATTTGGAGTTTCTCTCC
FD959123       <-- TACAATATGATTATCGTTT...................
FD982964       <-- TAC...................................
EY930573       --> T.....................................
EV548490       --> TACAATATGATTATCG......................
EV552352       --> TACAATATGATTATCGTTTAAATTTag...........
EX747243       --> CACAATATGATTATCGTTTt..................
EY913145       --> TACAATATGATTATCGTTTAAATT..............
EY915099       --> aa....................................
EY915786       --> TACAATATGAT...........................
FD962183       --> TACAATATGATTATCGTTTAAATTTGGAGTTTCTCTCC
FD962512       --> TACAATATGATTATCGTTT...................
FD986474       --> TACA..................................
FD962614       --> TACAATATGATTATCGTTT...................
EY922475       --> TACAATATTATTA.........................
FD986781       --> TAC...................................