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Alignment for radish unigene UN03891

               1      -     51
UN03891        --> TAAAGGTGGGTGGTCTCCCTTTAATAACAAAACAAAAAAAAGTAGTCTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548773       <-- TAAAGGTGGGTGGTCTCCCTTTAATAACAAAACAAAAAAAAGTAGTCTGT
FD945844       <-- ..................................................
FD561540       <-- ..................................................
FD550631       <-- ..................................................
EX773826       <-- ..................................................
FD942063       --> ..................................................
FD565676       --> ..................................................
FD546563       --> ..................................................
FY445610       --> ..................................................
EX777637       --> ..................................................
FY441490       --> ..................................................

               51     -    101
UN03891        --> GACAAACAAAACTGATGCAAGTTAAGATCTGCTTATAACTCAAAATGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548773       <-- GACAAACAAAACTGATGAAAGTTAAGATCTGCTTATAACTCAAAATGTGT
FD945844       <-- ..................................................
FD561540       <-- ..................................................
FD550631       <-- ..................................................
EX773826       <-- ..................................................
FD942063       --> GACAAACAAAACTGATGCAAGTTAAGATCTGCTTATAACTCAAAATGTGT
FD565676       --> ....................................AACTCAAAATGTGT
FD546563       --> ..................................................
FY445610       --> ..................................................
EX777637       --> ..................................................
FY441490       --> ..................................................

               101    -    151
UN03891        --> GCGAGAGAATAAATTATCGCAGAAAATCACCAGCTCAAACTCTTAAAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548773       <-- GCGAGAGAATAAATTATCGCAGAAAATCACCAGCTCAAACTCTTAAAAAT
FD945844       <-- ................................................AT
FD561540       <-- ..................................................
FD550631       <-- ..................................................
EX773826       <-- ..................................................
FD942063       --> GCGAGAGAATAAATTATCGCAGAAAATCACCAGCTCAAACTCTTAAAAAT
FD565676       --> GCGAGAGAATAAATTATCGCAAAAAATCACCAGCTCAAACTCTTAAAAAT
FD546563       --> ...........AATTATCGCAGAAAATCACCAGCTCAAACTCTTAAAAAT
FY445610       --> .............TTATCGCAGAAAATCACCAGCTCAAACTCTTAAAA-T
EX777637       --> .................CGCAGAAAATCACCAGCTCAAACTCTTAAAAAT
FY441490       --> .................CGCAGAAAATCACCAGCTCAAACTCTTAAAA-T

               151    -    201
UN03891        --> CCTTGTTCCTTATCAATCTAATCTCGAAGCCATTCTAAGAGATTACATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548773       <-- CCTTGTTCCTTATCAATCTAATCTCGAAGCCATTCTAAGAGATTACATAT
FD945844       <-- CCT-GTTCCTTATCAATCTAATCTCGAAGCCATTCTAAGAGATTACATAT
FD561540       <-- ...........................AGCCATTCTAAGAGATTACATAT
FD550631       <-- ..................................................
EX773826       <-- ..................................................
FD942063       --> CCTTGTTCCTTATCAATCTAATCTCGAAGCCATTCTAAGAGATTACATAT
FD565676       --> CCTTGTTCCTTATCAATCTAATCTCGAAGCCATTCTAAGAGATTACATAT
FD546563       --> CCTTGTTCCTTATCAATCTAATCTCGAAGCCATTCTAAGAGATTACATAT
FY445610       --> CCTTGTTCCTTATCAATCTAATCTCGAAGCCATTCTAAGAGATTACATAT
EX777637       --> CCTTGTTCCTTATCAATCTAATCTCGAAGCCATTCTAAGAGATTACATAT
FY441490       --> CCTTGTTCCTTATCAATCTAATCTCGAAGCCATTCTAAGAGATTACATAT

               201    -    251
UN03891        --> CAGTAAAGAAAAGAATGAGATCAATTGGTGTACAGTTGTCCTCACCACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548773       <-- CAGTAAAGAAAAGAATGAGATCAAT-GGTGTACAGTTGTCCTCACCACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD945844       <-- CAGTAAAGAAAAGAATGAGATCAATTGGTGTACAGTTGTCCTCACCACAA  Raphanus sativus cv Early Scarlet Globe
FD561540       <-- CAGTAAAGAAAAGAATGAGATCAATTGGTGTACAGTTGTCCTCACCACAA  Raphanus sativus var. oleiformis
FD550631       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX773826       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD942063       --> CAGTAAAGAAAAGAATGAGATCAATTGGTGTACAGTTGTCCTCACCACAA  Raphanus sativus cv Early Scarlet Globe
FD565676       --> CAGTAAAGAAAAGAATGAGATCAATTGGTGTACAGTTGTCCTCACCACAA  Raphanus sativus var. oleiformis
FD546563       --> CAGTAAAGAAAAGAATGAGATCAAT-GGTGTACAGTTGTCCTCACCACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY445610       --> CAGTAAAGAAAAGAATGAGATCAAT-GGTGTACAGTTGTCCTCACCACAA  Raphanus sativus cv GSK3-1
EX777637       --> CAGTAAAGAAAAGAATGAGATCAATTGGTGTACAGTTGTCCTCACCACAA  Raphanus raphanistrum subsp. landra
FY441490       --> CAGTAAAGAAAAGAATGAGATCAAT-GGTGTACAGTTGTCCTCACCACAA  Raphanus sativus cv GSK3-1

               251    -    301
UN03891        --> GCCAATGAACTTCCACCAGGCACCACCTACACCAAGCCAGATAAGAATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548773       <-- GCCAATGAACTTCCACCAGGCACCACCTACACCAAGCCAGATAAGAATGT
FD945844       <-- GCCAATGAACTTCCACCAGGCACCACCTACACCAAGCCAGATAAGAATGT
FD561540       <-- GCCAATGAACTTCCACCAGGCACCACCTACACCAAGCCAGATAAGAATGT
FD550631       <-- ..................................................
EX773826       <-- ..................................................
FD942063       --> GCCAATGAACTTCCACCAGGCACCACCTACACCAAGCCAGATAAGAATGT
FD565676       --> GCCAATGAACTTCCACCAGGCACCACCTACACCAAGCCAGATAAAAATGT
FD546563       --> GCCAATGAACTTCCACCAGGCACCACCTACACCAAGCCAGATAAGAATGT
FY445610       --> GCCAATGAACTTCCACCAGGCACCACCTACACCAAGCCAGATAAGAATGT
EX777637       --> GCCAATGAACTTCCACCAGGCACCACCTACACCAAGCCAGATAAGAATGT
FY441490       --> GCCAATGAACTTCCACCAGGCACCACCTACACCAAGCCAGATAAGAATGT

               301    -    351
UN03891        --> TGACTATCGATATCAAGAATCCATAGCCCCACCATTTGGCCAGCGGCACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548773       <-- TGACTATCGATATCAAGAATCCGTAGCCCCACCATTTGGCCAGCGGCACG
FD945844       <-- TGACTATCGATATCAAGAATCCATAGCCCCACCATTTGGCCAGCGGCACG
FD561540       <-- TGACTATCGATATCAAGAATCCATAGCCCCACCATTTGGCCAGCGGCACG
FD550631       <-- ..................................................
EX773826       <-- ..................................................
FD942063       --> TGACTATCGATATCAAGAATCCATAGCCCCACCATTTGGCCAGCGGCACG
FD565676       --> TGACTATCGATATCAAGAATCCATAGCCCCACCATTTGGCCAGCGGCACG
FD546563       --> TGACTATCGATATCAAGAATCCATAGCCCCACCATTTGGCCAGCGGCACG
FY445610       --> TGACTATCGATATCAAGAATCCGTAGCCCCACCATTTGGCCAGCGGCACG
EX777637       --> TGACTATCGATATCAAGAATCCATAGCCCCACCATTTGGCCAGCGGCACG
FY441490       --> TGACTATCGATATCAAGAATCCGTAGCCCCACCATTTGGCCAGCGGCACG

               351    -    401
UN03891        --> TAGTTAGCCCCGTAGAAGATAGGCGCAGACCCGATACCGTAATGGGTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548773       <-- TAGTTAGCCCCGTAGAAGATAGGCGCAGACCCGATACCGTAATGGGTCAG
FD945844       <-- TAGTTAGCCCCGTAGAAGATAGGCGCAGACCCGATACCGTAATGGGTCAG
FD561540       <-- TAGTTAGCCCCGTAGAAGATAGGCGCAGACCCGATACCGTAATGGGTCAG
FD550631       <-- ..................................................
EX773826       <-- ..................................................
FD942063       --> TAGTTAGCCCCGTAGAAGATAGGCGCAGACCCGATACCGTAATGGGTCAG
FD565676       --> TAGTTAGCCCCGTAAAAAATAGGCGCAAACCCGATACCGTAATGGGTCAG
FD546563       --> TAGTTAGCCCCGTAGAAGATAGGCGCAGACCCGATACCGTAATGGGTCAG
FY445610       --> TAGTTAGCCCCGTAGAAGATAGGCGCAGACCCGATACCGTAATGGGTCAG
EX777637       --> TAGTTAGCCCCGTAGAAGATAGGCGCAAACCCGATACCGTAATGGGTCAG
FY441490       --> TAGTTAGCCCCGTAGAAGATAGGCGCAGACCCGATACCGTAATGGGTCAG

               401    -    451
UN03891        --> TCCTCCCATCAGGTTCGAGAGGAATGCAAGAACCAAGGCTGCAAAGTAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548773       <-- TCCTCCCATCAGGTTCGAGAGGAATGCAAGAACCAAGGCTGCAAAGTAAG
FD945844       <-- TCCTCCCATCAGGTTCGAGAGGAATGCAAGAACCAAGGCTGCAAAGTAAG
FD561540       <-- TCCTCCCATCAGGTTCGAGAGGAATGCAAGAACCAAGGCTGCAAAGTAAG
FD550631       <-- ...................AGGAATGCAAGAACCAAGGCTGCAAAGTAAG
EX773826       <-- ..................................................
FD942063       --> TCCTCCCATCAGGTTCGAGAGGAATGCAAGAACCAAGGCTGCAAAGTAAG
FD565676       --> TCCTCCCATCAGGTTCGAGAGGAATGCAAGAACCAAGGCTGCAAAGTAAG
FD546563       --> TCCTCCCATCAGGTTCGAGAGGAATGCAAGAACCAAGGCTGCAAAGTAAG
FY445610       --> TCCTCCCATCAGGTTCGAGAGGAATGCAAGAACCAAGGCTGCAAAGTAAG
EX777637       --> TCCTCCCATCAGGTTCGAGAGGAATGCAAGAACCAAGGCTGCAAAGTAAG
FY441490       --> TCCTCCCATCAGGTTCGAGAGGAATGCAAGAACCAAGGCTGCAAAGTAAG

               451    -    501
UN03891        --> GTGGTGTGCCTAGAGCGGTTGAGACCGACAAAAATGCAGTGAACATAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548773       <-- GTGGTGTGCCTAGAGCGGTTGAGACCGACAAAAATGCAGTGAACATAGCC
FD945844       <-- GTGGTGTGCCTAGAGCGGTTGAGACCGACAAAAATGCAGTGAACATAGCC
FD561540       <-- GTGGTGTGCCTAGAGCGGTTGAGACCGACAAAAATGCAGTGAACATAGCC
FD550631       <-- GTAGTGTGCCTAGAGCGGTTGAGACCGACAAAAATGCAGTGAACATAGCC
EX773826       <-- ..................................................
FD942063       --> GTGGTGTGCCTAGAGCGGTTGAGACCGACAAAAATGCAGTGAACATAGCC
FD565676       --> GTGGTGTGCCTAGAGCGGTTGAGACCGACAAAAATGCAGTGAACATAGCC
FD546563       --> GTAGTGTGCCTAGAGCGGTTGAGACCGACAAAAATGCAGTGAACATAGCC
FY445610       --> GTGGTGTGCCTAGAGCAGTTGAGACCGACAAAAATGCAGTGAACATAGCC
EX777637       --> GTGGTGTGCCTAGAGCGGTTGAGACCGACAAAAATGCAGTGAACATAGCC
FY441490       --> GTGGTGTGCCTAGAGCAGTTGAGACCGACAAAAATGCAGTGAACATAGCC

               501    -    551
UN03891        --> CCGATGTGAGCCGCTCCACTCGCAAAGAAGTAGTGAGTGTAGAAGTACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548773       <-- CCGATGTGAGCCGCTCCACTCGCAAAGAAATAGTGAGTGTAGAAGTACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD945844       <-- CCGATGTGAGCCGCTCCACTCGCAAAGAAGTAGTGAGTGTAGAAGTACAA  Raphanus sativus cv Early Scarlet Globe
FD561540       <-- CCGATGTGAGCCGCTCCACTCGCAAAAAAGTAGTGAGTGTAGAAGTACAA  Raphanus sativus var. oleiformis
FD550631       <-- CCGATGTGAGCCGCTCCACTCGCAAAGAAGTAGTGAGTGTAGAAGTACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX773826       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD942063       --> CCGATGTGAGCCGCTCCACTCGCAAAGAAGTAGTGAGTGTAGAAGTACAA  Raphanus sativus cv Early Scarlet Globe
FD565676       --> CCGATGTGAGCCGCTCCACTCGCAAAAAAGTAGTGAGTGTAGAAGTACAA  Raphanus sativus var. oleiformis
FD546563       --> CCGATGTGAGCCGCTCCACTCGCAAAGAAGTAGTGAGTGTAGAAGTACAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY445610       --> CCAATGTGAGCCGCTCCACTCGCAAAGAAGTAGTGAGTGTAGAAGTACAA  Raphanus sativus cv GSK3-1
EX777637       --> CCGATGTGAGCCGCTCCACTCGCAAAGAAGTAGTGAGTGTAGAAGTACAA  Raphanus raphanistrum subsp. landra
FY441490       --> CCAATGTGAGCCGCTCCACTCGCAAAGAAGTAGTGAGTGTAGAAGTACAA  Raphanus sativus cv GSK3-1

               551    -    601
UN03891        --> GAGGACGAGGATTCCAAACGATAGTTGCCATGACAAACCCAATCCTCCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548773       <-- AAGGACGAGGATTCCAAACGATAGTTGCCATGACAAACCCAATCCTCCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD945844       <-- GAGGACGAGGATTCCAAACGATAGTTGCCATGACAAACCCAATCCTCCCA  Raphanus sativus cv Early Scarlet Globe
FD561540       <-- GAGGACGAGGATTCCAAACGATAGTTGCCATGACAAACCCAATCCTCCCA  Raphanus sativus var. oleiformis
FD550631       <-- AAAGACGAGGATTCCAAACGATAGTTGCCATGACAAACCCAATCCTCCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX773826       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD942063       --> GAGGACGAGGATTCCAAACGATAGTTGCCATGACAAACCCAATCCTCCCA  Raphanus sativus cv Early Scarlet Globe
FD565676       --> GAGGACGAGGATTCCAAACGATAGTTGCCATGACAAACCCAATCCTCCCA  Raphanus sativus var. oleiformis
FD546563       --> AAAGACGAGGATTCCAAACGATAGTTGCCATGACAAACCCAATCCTCCCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY445610       --> AAGGACGAGGATTCCAAACGATAGTTGCCATGACAAACCCAATCCTCCCA  Raphanus sativus cv GSK3-1
EX777637       --> GAGGACGAGGATTCCAAACGATAGTTGCCATGACAAACCCAATCC-CCCA  Raphanus raphanistrum subsp. landra
FY441490       --> AAGGACGAGGATTCCAAACGATAGTTGCCATGACAAACCCAATCCTCCCA  Raphanus sativus cv GSK3-1

               601    -    651
UN03891        --> CAAACTTGACAACAGTCTGGCTGAACCACTCAATGAGACCGTATTTGTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548773       <-- CAAACTTGACAACGGTCTGGCTGAACCACTCAATGAGACCGTATTTGTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD945844       <-- CAAACTTGACAACAGTCTGGCTGAACCACTCAATGAGACCGTATTTGTTA  Raphanus sativus cv Early Scarlet Globe
FD561540       <-- CAAACTTGACAACAGTCTGGCTGAACCACTCAATGAGACCGTATTTGTTA  Raphanus sativus var. oleiformis
FD550631       <-- CAAACTTGACAACGGTCTGGCTGAACCACTCAATGAGACCGTATTTGTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX773826       <-- ......ttgagACAGTCTGGCTGA-CCACTCAATGAGACCGTATTTGTTA  Raphanus raphanistrum subsp. landra
FD942063       --> CAAACTTGACAACAGTCTGGCTGAACCACTCAATGAGACCGTATTTGTTA  Raphanus sativus cv Early Scarlet Globe
FD565676       --> CAAACTTGACAACAGTCTGGCTGAACCACTCAATGAGACCGTATTTGTTA  Raphanus sativus var. oleiformis
FD546563       --> CAAACTTGACAACGGTCTGGCTGAACCACTCAATGAGACCGTATTTGTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FY445610       --> CAAACTTGACAACGGTCTGGCTGAACCACTCAATGAGACCGTATTTGTTA  Raphanus sativus cv GSK3-1
EX777637       --> CAAACTTGACGACAGTCTGGC.............................  Raphanus raphanistrum subsp. landra
FY441490       --> CAAACTTGACAACGGTCTGGCTGAACCACTCAATGAGACCGTATTTGTTA  Raphanus sativus cv GSK3-1

               651    -    701
UN03891        --> AGATAACCCGCCATTGCAATGAGAGCAGCAAACCAAGTGAGCGTGTCCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548773       <-- AGATAACCCGCCATTGCAATGAGAGCAGCAAACCAAGTGAGCGTGTCCC.
FD945844       <-- AGATAACCCGCCATTGCAATGAGAGCAGCAAACCAAGTGAGCGTGTCCCA
FD561540       <-- AGATAACCCGCCATTGCAATGAGAGCAGCAAACCAAGTGAGCGTGTCCCA
FD550631       <-- AGATAACCTGCCATTGCAATGAGAGCAGCAAACCAAGTGAGCGTGTCCCA
EX773826       <-- AGATAACCCGCCATTGCAATGAGAGCAGCAAACCAAGTGAGCGTGTCCCA
FD942063       --> AGATAACCCGCCATTGCAATGAGAGCAGCAAACCAAGTGAGCGTGTCCCA
FD565676       --> AGATAACCCGCCATTGCAATGAGAGCAGCAAACCAAGTGAGCGTGTCCCA
FD546563       --> AGATAACCTGCCATTGCAATGAGAGCAGCAAACCAAGTGAGCGTGTCCCA
FY445610       --> AGATAACCCGCCATTGCAATGAGAGCAGCAAACCAAGTGAGCGTGTCCCA
EX777637       --> ..................................................
FY441490       --> AGATAACCCGCCATTGCAATGAGAGCAGCAAACCAAGTGAGCGTGTCCCA

               701    -    751
UN03891        --> TGCAACTGACTCAGCTAAGCACTCTTTCCATGTCACAACACCTGTCACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548773       <-- ..................................................
FD945844       <-- TGCAACTGACTCAGCTAAGCACTCTTTCCATGTCACAACACCTGTCACAA
FD561540       <-- TGCAACTGACTCAGCTAAGCACTCTTTCCATGTCACAACACCTGTCACAA
FD550631       <-- TGCAACTGACTCAGCTAAGCACTCTTTCCATGTGACAACACCTGTCACAA
EX773826       <-- TGCAACTGACTCAGCTAAGCACTCTTTCCATGTCACAACACCTGTCACAA
FD942063       --> TGCAACTGACTCAGCTAAGCACTCTTTCCATGTCACAACACCTGTCACAA
FD565676       --> TGCAACTGACTCAGCTAAGCACTCTTTCCATGTCACAACACCTGTCACAA
FD546563       --> TGCAACTGACTCAGCTAAGCACTCTTTCCATGTGACAACACCTGTCACAA
FY445610       --> TGCAACTGACTCAGCTAAGCACTCTTTCCATGTCACAACACCTGTCACTA
EX777637       --> ..................................................
FY441490       --> TGCAACTGACTCAGCTAAGCACTCTTTCCATGTCACAACACCTGTCACTA

               751    -    801
UN03891        --> GAAGCACTGATAATCCAAGAATGGCTGCAGTCACAGCATCTACACTCAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548773       <-- ..................................................
FD945844       <-- GAAGCACTGATAATCCAAGAATGGCTGCAGTCACAGCATCTACACTCAGC
FD561540       <-- GAAGCACTGATAATCCAAGAATGGCTGCAGTCACAGCATCTACACTCAGC
FD550631       <-- GAAGCACCGATAATCCAAGAATGGCTGCAGTCACAGCATCTACACTCAGC
EX773826       <-- GAAGCACTGATAATCCAAGAATGGCTGCAGTCACAGCATCTACACTCAGC
FD942063       --> GAAGCACTGATAATCCAAGAATGGCTGCAGTCACAGCATCTACACTCAGC
FD565676       --> GAAGCACTGATAATCCAAGAATGGCTGCAGTCACAGCATCTACACTCAG.
FD546563       --> GAAGCACCGATAATCCAAGAATGGCTGCAGTCACAGCATCTACACTCAGC
FY445610       --> GAAGCACTGATAATCCAAGAATGGCTGCAGTCACAGCATCTACACTCAGC
EX777637       --> ..................................................
FY441490       --> GAAGCACTGATAATCCAAGAATGGCTGCAGTCACAGCATCTACACTCAGC

               801    -    851
UN03891        --> TTAGCTCCAAAAATCCAGAGACCAACGGTGAGAAACAAAGTGGCAGCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548773       <-- ..................................................
FD945844       <-- TTAGCTCCAAAAATCCAGAGACCAACAGTGAGAAACAAAGTGGCAGCCAT
FD561540       <-- TTAGCTCCAAAAATCCAGAGACCAACAGTGAGAAACAAAGTGGCAGCCAT
FD550631       <-- TTAGCTCCAAAAATCCAGAGACCAACGGTGAGAAACAAAGTGGCAGCCAT
EX773826       <-- TTAGCTCCAAAAA.....................................
FD942063       --> TTA...............................................
FD565676       --> ..................................................
FD546563       --> TTAG..............................................
FY445610       --> TTAGCTCCAAAAATCCAGAGACCAACGGTGAGAAACAAAGTGGCAGCCAT
EX777637       --> ..................................................
FY441490       --> TTAGCTCCAAAAATCCAGAGACCAACGGTGAGAAACAAAGTGGCAGCCAT

               851    -    901
UN03891        --> AATCAACTCGTTCTTGGACATAGGTCCCATCTTATCAAGCTTCTCCTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548773       <-- ..................................................
FD945844       <-- Ac................................................
FD561540       <-- AATCAACTCGTTCTTGGACATAGGTCCCATCTTATCAAGCTTCTCCTGAG
FD550631       <-- AATCAACTCGTTCTTGGACATAGGTCCCATCTTATCAAGCTTCTCCTGAG
EX773826       <-- ..................................................
FD942063       --> ..................................................
FD565676       --> ..................................................
FD546563       --> ..................................................
FY445610       --> AATCAACTCGTTCTTGGACATAGGTCCCATCTTATCAAGCTTCTCCTGAG
EX777637       --> ..................................................
FY441490       --> AATCAACTCGTTCTTGGACATAGGTCCCATCTTATCAAGCTTCTCCTGAG

               901    -    951
UN03891        --> CCAGCTTGGGAGCATCAGGGCTGCTCTTCACCGTCGGCGGATAGATAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548773       <-- ..................................................
FD945844       <-- ..................................................
FD561540       <-- CCAGCc............................................
FD550631       <-- CCAGCTTGGGAGCATCAGGGCTGCTCTTCACCGTGGGCGGATAGATAAGA
EX773826       <-- ..................................................
FD942063       --> ..................................................
FD565676       --> ..................................................
FD546563       --> ..................................................
FY445610       --> CCAGCTTGGGAGCATCAGGGCTGCTCTTCACCGTCGGCGGATAGATAAGA
EX777637       --> ..................................................
FY441490       --> CCAGCTTGGGAGCATCAGGGCTGCTCTTCACCGTCG..............

               951    -   1001
UN03891        --> TACAACAGAAACGGAACAACAATCAACGACGCAATCCCGGGGACAATCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV548773       <-- ..................................................
FD945844       <-- ..................................................
FD561540       <-- ..................................................
FD550631       <-- TACAACAGAAACGGAACAACAATCAACGACGCAATCCCGGGGACAATCGC
EX773826       <-- ..................................................
FD942063       --> ..................................................
FD565676       --> ..................................................
FD546563       --> ..................................................
FY445610       --> TACAAa............................................
EX777637       --> ..................................................
FY441490       --> ..................................................

               1001   -   1051
UN03891        --> AGCCTTCGCCCC
                   ~~~~~~~~~~~~
EV548773       <-- ............
FD945844       <-- ............
FD561540       <-- ............
FD550631       <-- AGCCTTCGCCCC
EX773826       <-- ............
FD942063       --> ............
FD565676       --> ............
FD546563       --> ............
FY445610       --> ............
EX777637       --> ............
FY441490       --> ............