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Alignment for radish unigene UN03920

               1      -     51
UN03920        --> TCTCTTGTCCTCTTCCTTCTTCTCTCTCTCTCTCTCCTCTTGGTGGCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD554367       <-- ..................................................
FD983903       <-- ..................................................
FY442700       <-- ..................................................
FY441651       --> TCTCTTGTCCTCTTCCTTCTTCTCTCTCTCTCTCTCCTCTTGGTGGCTCC
FY448395       --> ..................................................
FD562895       --> ..................................................
EY933310       --> ..................................................
FD558480       --> ..................................................
FY447234       --> ..................................................
FY446361       --> ..................................................
FY452710       --> ..................................................
EY941611       --> ..................................................
FY435603       --> ..................................................
FY448811       --> ..................................................
FY451089       --> ..................................................
FY438295       --> ..................................................
FY451175       --> ..................................................
FY450119       --> ..................................................
FD987948       --> ..................................................
EV548590       --> ..................................................

               51     -    101
UN03920        --> TTGTTATAGAAGTAGAAGCCCTTTTTGCTACTGCTCCTTTCTAATTTCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD554367       <-- ..................................................
FD983903       <-- ..................................................
FY442700       <-- ..................................................
FY441651       --> TTGTTATAGAAGTAGAAGCCCTTTTTGCTACTGCTCCTTTCTAATTTCGT
FY448395       --> .............AGAAGCCCTTTTTGCTACTGCTCCTTTCTAATTTCGT
FD562895       --> .......................TTTGCTACTGCTCCTTTCTAATTTCGT
EY933310       --> .................................ggCCTTTCTAATTTCGT
FD558480       --> ........................................ggAATTTCGT
FY447234       --> ......................................cggcacgaggGT
FY446361       --> ..........................................cggcacga
FY452710       --> ..................................................
EY941611       --> ..................................................
FY435603       --> ..................................................
FY448811       --> ..................................................
FY451089       --> ..................................................
FY438295       --> ..................................................
FY451175       --> ..................................................
FY450119       --> ..................................................
FD987948       --> ..................................................
EV548590       --> ..................................................

               101    -    151
UN03920        --> GTTACCTGATCGTGGGTTCCCCTGCAGGAAAAATCCGATCTTTCTTTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD554367       <-- ..................................................
FD983903       <-- ..................................................
FY442700       <-- ..................................................
FY441651       --> GTTACCTGATCGTGGGTTCCCCTGCAGGAAAAATCCGATCTTTCTTTCTG
FY448395       --> GTTACCTGATCGTGGGTTCCCCTGCAGGAAAAATCCGATCTTTCTTTCTG
FD562895       --> GTTACCTGATCGTGGGTTCCCCTGCAGGAAAAATCCGATCTTTCTTTCTG
EY933310       --> GTTACCTGATCGTGGGTTCCCCTGCAGGAAAAATCCGAT-TTTCTTTCTG
FD558480       --> GTTACCTGATCGTGGGTTCCCCTGCAGGAAAAATCCGATCTTTCTTTCTG
FY447234       --> GTTACCTGATCGTGGGTTCCCCTGCAGGAAAAATCCGATCTTTCTTTCTG
FY446361       --> ggTACCTGATCGTGGGTTCCCCTGCAGGAAAA-TCCGATCTTTCTTTCTG
FY452710       --> ......TGATCGTGGGTTCCCCTGCAGGAAAA-TCCGATCTTTCTTTCTG
EY941611       --> .....ggGATCGTGGGTTCCCCTGCAGGAAAAATCCGATCTTTCTTTCTG
FY435603       --> ...........GTGGGTTCCCCTGCAGGAAAA-TCCGATCTTTCTTTCTG
FY448811       --> ...........GTGGGTTCCCCTGCAGGANAA-TCCGATCTTTCTTTCTG
FY451089       --> .....................CTGCAGGAAAA-TCCGATCTTTCTTTCTG
FY438295       --> ..............................AAATCCGATCTTTCTTTCTG
FY451175       --> ....................................GATCTTTCTTTCTG
FY450119       --> ..............................................TCTG
FD987948       --> ..................................................
EV548590       --> ..................................................

               151    -    201
UN03920        --> GGTTTCTGCAATTACCGATTTATCTGATCATGGCGGTCGTTGAGAAAGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD554367       <-- ..................................................
FD983903       <-- ..................................................
FY442700       <-- ..................................................
FY441651       --> GGTTTCTGCAATTACCGATTTATCTGATCATGGCGGTCGTTGAGAAAGTC
FY448395       --> GGTTTCTGCAATTACCGATTTATCTGATCATGGCGGTCGTTGAGAAAGTC
FD562895       --> GGTTTCTTCAATTAGCGATTTATCTGATCATGGCGGTCGTTGAGAAAGTC
EY933310       --> GGTTTCTTCAATTAGCGATTTATCTGATCATGGCGGTCGTTGAGAAAGTC
FD558480       --> GGTTTCTCCAATTAGCGATTTATCTGATCATGGCGGTCGTTGAGAAAGTC
FY447234       --> GGTTTCTGCAATTACCGATTTATCTGATCATGGCGGTCGTTGAGAAAGTC
FY446361       --> GGTTTCTGCAATTACCGATTTATCTGATCATGGCGGTCGTTGAGAAAGTC
FY452710       --> GGTTTCTGCAATTACCGATTTATCTGATCATGGCGGTCGTTGAGAAAGTC
EY941611       --> GGTTTCTGCAATTACCTATTTATCTGATCATGGCGGTCGTTGAGAAAGTC
FY435603       --> GGTTTCTGCAATTACCGATTTATCTGATCATGGCGGTCGTTGAGAAAGTC
FY448811       --> GGTTTCTGCAATTACCGATTTATCTGATCATGGCGGTCGTTGAGAAAGTC
FY451089       --> GGTTTCTGCAATTACCGATTTATCTGATCATGGCGGTCGTTGAGAAAGTC
FY438295       --> GGTTTCTGCAATTACCGATTCATCTGATCATGGCGGTCGTTGAGAAAGTC
FY451175       --> GGTTTCTGCA-TTACCGATTTATCTGATCATGGCGGTCGTTGAGAAAGTC
FY450119       --> GGTTTCTGCAATTACCGATTTATCTGATCATGGCGGTCGTTGAGAAAGTC
FD987948       --> ..................................................
EV548590       --> ..................................................

               201    -    251
UN03920        --> GGAGGAGCTGATACAGAGGTTGGTGCTGCGATCTCCCCATCGCCGCCGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD554367       <-- ..................................................
FD983903       <-- ..................................................
FY442700       <-- ..................................................
FY441651       --> GGAGGAGCTGATACAGAGGTTGGTGCTGCGATCTCCCCATCGCCGCCGTC
FY448395       --> GGAGGAGCTGATACAGAGGTTGGTGCTGCGATCTCCCCATCGCCGCCGTC
FD562895       --> GGAGGAGCTGATACAGAGGTTGGTGCTGCGATCTCCCCATCGCCGCCGTC
EY933310       --> GGAGGAGCTGATACAGAGGTTGGTGCTGCGATCTCCCCATCGCCGCCGTC
FD558480       --> GGAGGAGCTGATACAGAGGTTGGTGCTGCGATCTCCCCATCGCCGCCATC
FY447234       --> GGAGGAGCTGATACAGAGGTTGGTGCTGCGATCTCCCCATCGCCGCCGTC
FY446361       --> GGAGGAGCTGATACAGAGGTTGGTGCTGCGATCTCCCCATCGCCGCCGTC
FY452710       --> GGAGGAGCTGATACAGAGGTTGGTGCTGCGATCTCCCCATCGCCGCCGTC
EY941611       --> GGAGGAGCTGATACAGAGGTTGGTGCTGCGATCTCCCCATCGCCGCCGTC
FY435603       --> GGAGGAGCTGATACAGAGGTTGGTGCTGCGATCTCCCCATCGCCGCCGTC
FY448811       --> GGAGGAGCTGATACAGAGGTTGGTGCTGCGATCTCCCCATCGCCGCCGTC
FY451089       --> GGAGGAGCTGATACAGAGGTTGGTGCTGCGATCTCCCCATCGCCGCCGTC
FY438295       --> GGAGGAGCTGATACAGAGGTTGGTGCTGCGATCTCCCCATCGCCGCCGTC
FY451175       --> GGAGGAGCTGATACAGAGGTTGGTGCTGCGATCTCCCCATCGCCGCCGTC
FY450119       --> GGAGGAGCTGATACAGAGGTTGGTGCTGCGATCTCCCCATCGCCGCCGTC
FD987948       --> ..................................................
EV548590       --> ..................................................

               251    -    301
UN03920        --> TTCCGTCACTAGTCAAGGATCAGGAGATCTGGGTGAAAATGGTGAGATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD554367       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD983903       <-- ..................................................  Raphanus raphanistrum subsp. landra
FY442700       <-- ..................................................  Raphanus sativus cv GSK3-1
FY441651       --> TTCCGTCACTAGTCAAGGATCAGGAGATCTGGGTGAAAATGGTGAGATCA  Raphanus sativus cv GSK3-1
FY448395       --> TTCCGTCACTAGTCAAGGATCAGGAGATCTGGGTGAAAATGGTGAGATCA  Raphanus sativus cv GSK3-1
FD562895       --> TTCCGTCACTAGTCAAGGATCAGGAGATCAGGGTGAAAATGGTGAGATCA  Raphanus sativus var. oleiformis
EY933310       --> TTCCGTCACTAGTCAAGGATCAGGAGATCAGGGTGAAAATGGTGAGATCA  Raphanus sativus var. oleiformis
FD558480       --> TTCCGTCACTAGTCAAGGATCAGGAGATCAGGGTGAAAATGGTGAGATCA  Raphanus raphanistrum subsp. landra
FY447234       --> TTCCGTCACTAGTCAAGGATCAGGAGATCTGGGTGAAAATGGTGAGATCA  Raphanus sativus cv GSK3-1
FY446361       --> TTCCGTCACTAGTCAAGGATCAGGAGATCTGGGTGAAAATGGTGAGATCA  Raphanus sativus cv GSK3-1
FY452710       --> TTCCGTCACTAGTCAAGGATCAGGAGATCTGGGTGAAAATGGTGAGATCA  Raphanus sativus cv GSK3-1
EY941611       --> TTCCGTCACTAGTCAAGGATCAGGAGATCAGGGTGAAAATGGTGAGATCA  Raphanus sativus cv Early Scarlet Globe
FY435603       --> TTCCGTCACTAGTCAAGGATCAGGAGATCTGGGTGAAAATGGTGAGATCA  Raphanus sativus cv GSK3-1
FY448811       --> TTCCGTCACTAGTCAAGGATCAGGAGATCTGGGTGAAAATGGTGAGATCA  Raphanus sativus cv GSK3-1
FY451089       --> TTCCGTCACTAGTCAAGGATCAGGAGATCTGGGTGAAAATGGTGAGATCA  Raphanus sativus cv GSK3-1
FY438295       --> TTCCGTCACTAGTCAAGGATCAGGAGATCTGGGTGAAAATGGTGAGATCA  Raphanus sativus cv GSK3-1
FY451175       --> TTCCGTCACTAGTCAAGGATCAGGAGATCTGGGTGAAAATGGTGAGATCA  Raphanus sativus cv GSK3-1
FY450119       --> TTCCGTCACTAGTCAAGGATCAGGAGATCTGGGTGAAAATGGTGAGATCA  Raphanus sativus cv GSK3-1
FD987948       --> ..................................................  Raphanus raphanistrum subsp. landra
EV548590       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               301    -    351
UN03920        --> GATCCGATGGTGGGGGAGAGAGCTTCAAGCGTGAGATGAGAGAGCTGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD554367       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD983903       <-- ..................................................  Raphanus raphanistrum subsp. landra
FY442700       <-- ..................................................  Raphanus sativus cv GSK3-1
FY441651       --> GATCCGATGGTGGGGGAGAGAGCTTCAAGCGTGAGATGAGAGAGCTGAAT  Raphanus sativus cv GSK3-1
FY448395       --> GATCCGATGGTGGGGGAGAGAGCTTCAAGCGTGAGATGAGAGAGCTGAAT  Raphanus sativus cv GSK3-1
FD562895       --> GATCCGATGGTGG---AGAGAGCTTCAAGCGTGAGATGAGAGAGCTGAAT  Raphanus sativus var. oleiformis
EY933310       --> GATCCGATGGTGG---AGAGAGCTTCAAGCGTGAGATGAGAGAGCTGAAT  Raphanus sativus var. oleiformis
FD558480       --> GATCCGATGGTGG---AGAGAGCTTCAAGCGTGAGATGAGAGAGCTGAAT  Raphanus raphanistrum subsp. landra
FY447234       --> GATCCGATGGTGGGGGAGAGAGCTTCAAGCGTGAGATGAGAGAGCTGAAT  Raphanus sativus cv GSK3-1
FY446361       --> GATCCGATGGTGGGGGAGAGAGCTTCAAGCGTGAGATGAGAGAGCTGAAT  Raphanus sativus cv GSK3-1
FY452710       --> GATCCGATGGTGGGGGAGAGAGCTTCAAGCGTGAGATGAGAGAGCTGAAT  Raphanus sativus cv GSK3-1
EY941611       --> GATCCGATGGTGG---AGAGAGCTTCAAGCGTGAGATGAGAGAGCTGAAT  Raphanus sativus cv Early Scarlet Globe
FY435603       --> GATCCGATGGTGGGGGAGAGAGCTTCAAGCGTGAGATGAGAGAGCTGAAT  Raphanus sativus cv GSK3-1
FY448811       --> GATCCGATGGTGGGGGAGAGAGCTTCAAGCGTGAGATGAGAGAGCTGAAT  Raphanus sativus cv GSK3-1
FY451089       --> GATCCGATGGTGGGGGAGAGAGCTTCAAGCGTGAGATGAGAGAGCTGAAT  Raphanus sativus cv GSK3-1
FY438295       --> GATCCGATGGTGGGGGAGAGAGCTTCAAGCGTGAGATGAGAGAGCTGAAT  Raphanus sativus cv GSK3-1
FY451175       --> GATCCGATGGTGGGGGAGAGAGCTTCAAGCGTGAGATGAGAGAGCTGAAT  Raphanus sativus cv GSK3-1
FY450119       --> GATCCGATGGTGGGGGAGAGAGCTTCAAGCGTGAGATGAGAGAGCTGAAT  Raphanus sativus cv GSK3-1
FD987948       --> ..................................................  Raphanus raphanistrum subsp. landra
EV548590       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               351    -    401
UN03920        --> GAGCTTTTAACTAAGCTCAACCCCATGGCTAAAGAGTTTGTTCCTCCCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD554367       <-- ..................................................
FD983903       <-- ..................................................
FY442700       <-- ..................................................
FY441651       --> GAGCTTTTAACTAAGCTCAACCCCATGGCTAAAGAGTTTGTTCCTCCCTC
FY448395       --> GAGCTTTTAACTAAGCTCAACCCCATGGCTAAAGAGTTTGTTCCTCCCTC
FD562895       --> GAGCTTTTAACTAAGCTCAACCCCATGGCTAAAGAGTTTGTTCCTCCCTC
EY933310       --> GAGCTTTTAACTAAGCTCAACCCCATGGCTAAAGAGTTTGTTCCTCCCTC
FD558480       --> GAGCTTTTAACTAAGCTCAACCCCATGGCTAAAGAGTTTGTTCCTCCCTC
FY447234       --> GAGCTTTTAACTAAGCTCAACCCCATGGCTAAAGAGTTTGTTCCTCCCTC
FY446361       --> GAGCTTTTAACTAAGCTCAACCCCATGGCTAAAGAGTTTGTTCCTCCCTC
FY452710       --> GAGCTTTTAACTAAGCTCAACCCCATGGCTAAAGAGTTTGTTCCTCCCTC
EY941611       --> GAGCTTTTAACTAAGCTTAACCCCATGGCTAAAGAGTTCGTTCCTCCCTC
FY435603       --> GAGCTTTTAACTAAGCTCAACCCCATGGCTAAAGAGTTTGTTCCTCCCTC
FY448811       --> GAGCTTTTAACTAAGCTCAACCCCATGGCTAAAGAGTTTGTTCCTCCCTC
FY451089       --> GAGCTTTTAACTAAGCTCAACCCCATGGCTAAAGAGTTTGTTCCTCCCTC
FY438295       --> GAGCTTTTAACTAAGCTCAACCCCATGGCTAAAGAGTTTGTTCCTCCCTC
FY451175       --> GAGCTTTTAACTAAGCTCAACCCCATGGCTAAAGAGTTTGTTCCTCCCTC
FY450119       --> GAGCTTTTAACTAAGCTCAACCCCATGGCTAAAGAGTTTGTTCCTCCCTC
FD987948       --> ..................................................
EV548590       --> ..................................................

               401    -    451
UN03920        --> CCTCACTAAGCAAGGAGCTAACGGTGGTTTCTTCACCGTCCCTGATTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD554367       <-- ..................................................
FD983903       <-- ..................................................
FY442700       <-- ..................................................
FY441651       --> CCTCACTAAGCAAGGAGCTAACGGTGGTTTCTTCACCGTCCCTGATTCTT
FY448395       --> CCTCACTAAGCAAGGAGCTAACGGTGGTTTCTTCACCGTCCCTGATTCTT
FD562895       --> CCTCACTAAGCAAGGAGCTAACGGTGGTTTCTTCACCGTCGCTGATTCTT
EY933310       --> CCTCACTAAGCAAGGAGCTAACGGTGGTTTCTTCACCGTCGCTGATTCTT
FD558480       --> CCTCACTAAGCAAGGAGCTAACGGTGGTTTCTCCACCGTCGCTGATTCTT
FY447234       --> CCTCACTAAGCAAGGAGCTAACGGTGGTTTCTTCACCGTCCCTGATTCTT
FY446361       --> CCTCACTAAGCAAGGAGCTAACGGTGGTTTCTTCACCGTCCCTGATTCTT
FY452710       --> CCTCACTAAGCAAGGAGCTAACGGTGGTTTCTTCACCGTCCCTGATTCTT
EY941611       --> CCTCACTAAGCAAGGAGCTAACGGTGGTTTCTTCACCGTCCCTGATTCTT
FY435603       --> CCTCACTAAGCAAGGAGCTAACGGTGGTTTCTTCACCGTCCCTGATTCTT
FY448811       --> CCTCACTAAGCAAGGAGCTAACGGTGGTTTCTTCACCGTCCCTGATTCTT
FY451089       --> CCTCACTAAGCAAGGAGCTAACGGTGGTTTCTTCACCGTCCCTGATTCTT
FY438295       --> CCTCACTAAGCAAGGAGCTAACGGTGGTTTCTTCACCGTCCCTGATTCTT
FY451175       --> CCTCACTAAGCAAGGAGCTAACGGTGGTTTCTTCACCGTCCCTGATTCTT
FY450119       --> CCTCACTAAGCAAGGAGCTAACGGTGGTTTCTTCACCGTCCCTGATTCTT
FD987948       --> ..................................................
EV548590       --> ..................................................

               451    -    501
UN03920        --> TCCCCGTCAACGAAGACGGCGGTTTTCGACGGAAGAAGTCGTTCGGACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD554367       <-- ..................................................
FD983903       <-- ..................................................
FY442700       <-- ..................................................
FY441651       --> TCCCCGTCAACGAAGACGGCGGTTTTCGACGGAAGAAGTCGTTCGGACCA
FY448395       --> TCCCCGTCAACGAAGACGGCGGTTTTCGACGGAAG---TCGTTCGGACCA
FD562895       --> TCCCCGTCAACGAAGACGGCGGTTTTCGACGGAAGAAGCCGTTCGGAGGA
EY933310       --> TCCCCGTCAACGAAGACGGCGGTTTTCGACGGAAGAAGCCGTTCGGAGGA
FD558480       --> TCCCCGTCAACGAAGACGGCGGTTTTCGACGGAAGAAGCCGTTCGGAGGA
FY447234       --> TCCCCGTCAACGAAGACGGCGGTTTTCGACGGAAGAAGTCGTTCGGACCA
FY446361       --> TCCCCGTCAACGAAGACGGCGGTTTTCGACGGAAGAAGTCGTTCGGACCA
FY452710       --> TCCCCGTCAACGAAGACGGCGGTTTTCGACGGAAGAAGTCGTTCGGACCA
EY941611       --> TCCCCGTCAACGAAGACGGCGGTTTTCGACGGAAGAAGTCGTTCGGACCA
FY435603       --> TCCCCGTCAACGAAGACGGCGGTTT.........................
FY448811       --> TCCCCGTCAACGAAGACGGCGGTTTTCGACGGAAGAAGTCGTTCGGACCA
FY451089       --> TCCCCGTCAACGAAGACGGCGGTTTTCGACGGAAGAAGTCGTTCGGACCA
FY438295       --> TCCCCGTCAACGAAGACGGCGGTTTTCGACGGAAGAAGTCGTTCGGACCA
FY451175       --> TCCCCGTCAACGAAGACGGCGGTTTTCGACGGAAGAAGTCGTTCGGACCA
FY450119       --> TCCCCGTCAACGAAGACGGCGGTTTTCGACGGAAGAAGTCGTTCGGACCA
FD987948       --> ..................................................
EV548590       --> ..................................................

               501    -    551
UN03920        --> CCACAAGGGAAACGGAGGATGAATCCTCGGACAAGTATGGCTCAGCGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD554367       <-- ..................................................
FD983903       <-- ..................................................
FY442700       <-- ..................................................
FY441651       --> CCACAAGGGAAACGGAGGATGAATCCTCGGACAAGTATGGCTCAGCGTGA
FY448395       --> CCACAAGGGAAACGGAGGATGAATCCTCGGACAAGTATGGCTCAGCGTGA
FD562895       --> -CACAAGGGAAACGGAGGATGAATCCTCGGACAAGTATGGCTCAGCGTGA
EY933310       --> CCACAAGGGGAACGGAGGATGAATCCTCGGACAAGTATGGCTCAGCGTGA
FD558480       --> CCACAAGGGAAACGGAGGATGAATCCTCGGACAAGTATGGCTCAGCGTGA
FY447234       --> CCACAAGGGAAACGGAGGATGAATCCTCGGACAAGTATGGCTCAGCGTGA
FY446361       --> CCACAAGGGAAACGGAGGATGAATCCTCGGACAAGTATGGCTCAGCGTGA
FY452710       --> CCACAAGGGAAACGGAGGATGAATCCTCGGACAAGTATGGCTCAGCGTGA
EY941611       --> CCACAAGGGAAACGGAGGATGAATCCTCGGACAAGTATGGCTCAGCGTGA
FY435603       --> ..................................................
FY448811       --> CCACAAGGGAAACGGAGGATGAATCCTCGGACAAGTATGGCTCAGCGTGA
FY451089       --> CCACAAGGGAAACGGAGGATGAATCCTCGGACAAGTATGGCTCAGCGTGA
FY438295       --> CCACAAGGGAAACGGAGGATGAATCCTCGGACAAGTATGGCTCAGCGTGA
FY451175       --> CCACAAGGGAAACGGAGGATGAATCCTCGGACAAGTATGGCTCAGCGTGA
FY450119       --> CCACAAGGGAAACGGAGGATGAATCCTCGGACAAGTATGGCTCAGCGTGA
FD987948       --> ..................................................
EV548590       --> ..................................................

               551    -    601
UN03920        --> AGACGTCATTCGAAGAACTGTCTATGTGTCTGATATTGACCAACAGGTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD554367       <-- ..................................................
FD983903       <-- ..................................................
FY442700       <-- ..................................................
FY441651       --> AGACGTCATTCGAAGAACTGTCTATGTGTCTGATATTGACCAACAGGTCA
FY448395       --> AGACGTCATTCGAAGAACTGTCTATGTGTCTGATATTGACCAACAGGTCA
FD562895       --> AGACGTCATTCGAAGAACTGTCTATGTGTCTGATATTGACCAACAGGCCA
EY933310       --> AGACGTCATTCGAAGAACTGTCTATGTGTCTGATATTGACCAACAGGTCA
FD558480       --> AGACGTCATTCGAAGAGCTGTCTATGTGTCTGATATTGACCAACAGGTCA
FY447234       --> AGACGTCATTCGAAGAACTGTCTATGTGTCTGATATTGACCAACAGGTCA
FY446361       --> AGACGTCATTCGAAGAACTGTCTATGTGTCTGATATTGACCAACAGGTCA
FY452710       --> AGACGTCATTCGAAGAACTGTCTATGTGTCTGATATTGACCAACAGGTCA
EY941611       --> AGACGTCATTCGA-GAACTGTCTATGTGTCTGATATTGACCAACAGGTCA
FY435603       --> ..................................................
FY448811       --> AGACGTCATTCGAAGAACTGTCTATGTGTCTGATATTGACCAACAGGTCA
FY451089       --> AGACGTCATTCGAAGAACTGTCTATGTGTCTGATATTGACCAACAGGTCA
FY438295       --> AGACGTCATTCGAAGAACTGTCTATGTGTCTGATATTGACCAACAGGTCA
FY451175       --> AGACGTCATTCGAAGAACTGTCTATGTGTCTGATATTGACCAACAGGTCA
FY450119       --> AGACGTCATTCGAAGAACTGTCTATGTGTCTGATATTGACCAACAGGTCA
FD987948       --> ..................................................
EV548590       --> ..................................................

               601    -    651
UN03920        --> CTGAGGAGCAGCTTGCTGGTTTGTTCATCGGCTTTGGACAGGTTGTTGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD554367       <-- ..GAGGAGCAGCTTGCTGGTTTGTTCATCGGCTTTGGACAGGTTGTTGAC
FD983903       <-- ..................................................
FY442700       <-- ..................................................
FY441651       --> CTGAGGAGCAGCTTGCTGGTTTGTTCATCGGCTTTGGACAGGTTGTTGAC
FY448395       --> CTGAGGAGCAGCTTGCTGGTTTGTTCATCGGCTTTGGACAGGTTGTTGAC
FD562895       --> CTGAGGAGCACCTTGCTGGTTTGTTCATCGGCTTTGGACAGGTTGTTGAC
EY933310       --> CTGAGGAGCAGCTTGCTGGTTTGTTCATCGGCTTTGGACAGGTTGTTGAC
FD558480       --> CTGAGGAGCAGCTTGCTGGTTTGTTCATCGGCTTTGGACAGGTTGTTGAC
FY447234       --> CTGAGGAGCAGCTTGCTGGTTTGTTCATCGGCTTTGGACAGGTTGTTGAC
FY446361       --> CTGAGGAGCAGCTTGCTGGTTTGTTCATCGGCTTTGGACAGGTTGTTGAC
FY452710       --> CTGAGGAGCAGCTTGCTGGTTTGTTCATCGGCTTTGGACAGGTTGTTGAC
EY941611       --> CTGAGGAGCAGCTTGCTGGTTTGTTCATCGGCTTTGGACAGGTTGTTGAC
FY435603       --> ..................................................
FY448811       --> CTGAGGAGCAGCTTGCTGGTTTGTTCATCGGCTTTGGACAGGTTGTTGAC
FY451089       --> CTGAGGAGCAGCTTGCTGGTTTGTTCATCGGCTTTGGACAGGTTGTTGAC
FY438295       --> CTGAGGAGCAGCTTGCTGGTTTGTTCATCGGCTTTGGACAGGTTGTTGAC
FY451175       --> CTGAGGAGCAGCTTGCTGGTTTGTTCATCGGCTTTGGACAGGTTGTTGAC
FY450119       --> CTGAGGAGCAGCTTGCTGGTTTGTTCATCGGCTTTGGACAGGTTGTTGAC
FD987948       --> ..................................................
EV548590       --> ..................................................

               651    -    701
UN03920        --> TGTCGCATTTGCGGGGACCCAAACTCAGTACTTAAGTTTGCTTTCATCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD554367       <-- TGTCGCATTTGCGGG-ACCCAAACTCAGTACTTAAGTTTGCTTTCATCGA
FD983903       <-- ..................................................
FY442700       <-- ..................................................
FY441651       --> TGTCGCATTTGCGGGGACCCAAACTCAGTACTTAAGTTTGCTTTCATCGA
FY448395       --> TGTCGCATTTGCGGGGACCCAAACTCAGTACTTAAGTTTGCTTTCATCGA
FD562895       --> TGTCGCATTTGCGGGGACCCAAACTCAGTACTTAAGTTTGCTTTCATCGA
EY933310       --> TGTCGCATTTGCGGGGACCCAAACTCAGTACTTAAGTTTGCTTTCATCGA
FD558480       --> TGTCGCATTTGCGGGGACCCAAACTCAGTACTTAAGTTTGCTTTCATCGA
FY447234       --> TGTCGCATTTGCGGGGACCCAAACTCAGTACTTAAGTTTGCTTTCATCGA
FY446361       --> TGTCGCATTTGCGGGGACCCAAACTCAGTACTTAAGTTTGCTCTCATCGA
FY452710       --> TGTCGCATTTGCGGGGACCCAAACTCAGTACTTAAGTTTGCTTTCATCGA
EY941611       --> TGTCGCATTTGCGGGGACCCAAACTCAGTACTTAAGTTTGCTTTCATCGA
FY435603       --> ..................................................
FY448811       --> TGTCGCATTTGCGGGGACCCAAACTCAGTACTTAAGTTTGCTTTCATCGA
FY451089       --> TGTCGCATTTGCGGGGACCCAAACTCAGTACTTAAGTTTGCTTTCATCGA
FY438295       --> TGTCGCATTTGCGGGGACCCAAACTCAGTACTTAAGTTTGCTTTCATCGA
FY451175       --> TGTCGCATTTGCGGGGACCCAAACTCAGTACTTAAGTTTGCTTTCATCGA
FY450119       --> TGTCGCATTTGCGGGGACCCAAACTCAGTACTTAAGTTTGCTTTCATCGA
FD987948       --> ..................................................
EV548590       --> ..................................................

               701    -    751
UN03920        --> GTTCACTGATGAAGGGGGTGCAAGAGCTGCGCTGAATCTGTCTGGGACGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD554367       <-- GTTCACTGATGAAGTGGGTTCAAGAGCTGCGCTGAATCTGTCCGGGACGG
FD983903       <-- ..................................................
FY442700       <-- ..................................................
FY441651       --> GTTCACTGATGAAGGGGGTGCAAGAGCTGCGCTGAATCTGTCTGGGACGG
FY448395       --> GTTCACTGATGAAGGGGGTGCAAGAGCTGCGCTGAATCTGTC........
FD562895       --> GTTCACTGATGAAGGGGGTGCAAGAGCTGCGCTGAATCTGTCTGGGACGG
EY933310       --> GTTCACTGATGAAGGGGGTGCAAGAGCTGCGCTGAATCTGTCT.......
FD558480       --> GTTCACTGATGAAGTGGGTTCAAGAGCTGCGCTGAATCTGT.........
FY447234       --> GTTCACTGATGAAGGGGGTGCAAGAGCTGCGCTGAATCTGTCTGGGACGG
FY446361       --> GTTCACTGATGAAGGGG-TGCAAGAGCTGCGCTGAATCTGTCTGGGACGG
FY452710       --> GTTCACTGATGAAGGGGGTGCAAGAGCTGCGCTGAATCTGTCTGGGACGG
EY941611       --> GTTCACTGATGAAAGGGGTGCAAGAGCTGCGCTGAATCTGTCT.......
FY435603       --> ..................................................
FY448811       --> GTTCACTGATGAAGGGGGTGCAAGAGCTGCGCTGAATCTGTCTGGGACGG
FY451089       --> GTTCACTGATGAAGGGGGTGCAAGAGCTGCGCTGAATCTGTCTGGGACGG
FY438295       --> GTTCACTGATGAAGGGGGTGCAAGAGCTGCGCTGAATCTGTCTGGGACGG
FY451175       --> GTTCACTGATGAAGGGGGTGCAAGAGCTGCGCTGAATCTGTCTGGGACGG
FY450119       --> GTTCACTGATGAAGGGGGTGCAAGAGCTGCGCTGAATCTGTCTGGGACGG
FD987948       --> ..................................................
EV548590       --> ..................................................

               751    -    801
UN03920        --> TGCTGGGATTCTATCCTGTGAAGGTTATGCCGTCCAAAACTGCTATTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD554367       <-- TACTGGGATTCTATCCTGTGAAGGTTATGCCGTCCAAAACTGCTATTGCA
FD983903       <-- ........................................gGCTATTGCA
FY442700       <-- ..................................................
FY441651       --> TGCTGGGATTCTATCCTGTGAAGGTTATGCCGTCCAAAACTGCTATTGCA
FY448395       --> ..................................................
FD562895       --> TGCTGGGATTCTATCCTGTGAAGGT-ATGCCGTCCAAAACTGCTATTGCA
EY933310       --> ..................................................
FD558480       --> ..................................................
FY447234       --> TGCTGGGATTCTATCCTGTGAAAGGTATGCCGTCCAAAACTGCTATTGCA
FY446361       --> TGCTGG............................................
FY452710       --> TGCTGGGATTCTATCCTGTGAAGGTTATGCCGTCCAAAACTGCTATTGCA
EY941611       --> ..................................................
FY435603       --> ..................................................
FY448811       --> TGCTGGGATTCTATCCTGTGAAAGGTATGCCGTCCAAAACTGCTATTGCA
FY451089       --> TGCTGGGATTCTATCCTGTGAAGGTTATGCCGTCCAAAACTGCTATTGCA
FY438295       --> TGCTGGGATTCTATCCTGTGAAGGTTATGCCGTCCAAAACTGCTATTGCA
FY451175       --> TGCTGGGATTCTATCCTGTGAAGGTTATGCCGTCCAAAACTGCTATTGCA
FY450119       --> TGCTGGGATTCTATCCTGTGAAGGTTATGCCGTCCAAAACTGCTATTGCA
FD987948       --> ........................................gGCTATTGCA
EV548590       --> ..................................................

               801    -    851
UN03920        --> CCGGTTAACCCGACGTTATTGCCTAGGACTGAAGATGAGCGTGAGAAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD554367       <-- CCGGTTAACCCGACGTTATTGCCTAGGACTGAAGATGAGCGTGAGAAGTG
FD983903       <-- CCGGTTAACCCGACGTTATTGCCTAGGACTGAAGATGAGCGTGAGAAGTG
FY442700       <-- ..................................................
FY441651       --> CCGGTTAACCCGACGTTATT..............................
FY448395       --> ..................................................
FD562895       --> CCGGTTAACCCGACGTTAT...............................
EY933310       --> ..................................................
FD558480       --> ..................................................
FY447234       --> CCGGTTAACCCGACGTTATTGCCTAGGACTGA..................
FY446361       --> ..................................................
FY452710       --> CCGGTTAACCCGACGTTATTGCCTAGGACTGAAGATGAGCGTGAGAAGTG
EY941611       --> ..................................................
FY435603       --> ..................................................
FY448811       --> CCGGTTAAC.........................................
FY451089       --> CCGGTTAACCCGACGTTATTGCCTAGGACTGAAGATGAGCGTGAGAAGTG
FY438295       --> CCGGTTAACCCGACGTTATTGCCTAGGACTGAAGATGAGCGTGAGAAGTG
FY451175       --> CCGGTTAACCCGACGTTATTGCCTAGGACTGAAGATGAGCGTGAGAAGTG
FY450119       --> CCGGTTAACCCGACGTTATTGCCTAGGACTGAAGATGAGCGTGAGAAGTG
FD987948       --> CCGGTTAACCCGACGTTATTGCCTAGGACTGAAGATGAGCGTGAGAAGTG
EV548590       --> ..................................................

               851    -    901
UN03920        --> TGCGAGAACTATCTACTGCACTAACATCGACAAGAAGGTCACTCAAACGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD554367       <-- TGCGAGAACTATCTATTGCACTAACATCGACAAGAAGGTTACTCAAACGG  Raphanus raphanistrum subsp. landra
FD983903       <-- TGCGAGAACTATCTATTGCACTAACATCGACAAGAAGGTTACTCAAACGG  Raphanus raphanistrum subsp. landra
FY442700       <-- ..................................................  Raphanus sativus cv GSK3-1
FY441651       --> ..................................................  Raphanus sativus cv GSK3-1
FY448395       --> ..................................................  Raphanus sativus cv GSK3-1
FD562895       --> ..................................................  Raphanus sativus var. oleiformis
EY933310       --> ..................................................  Raphanus sativus var. oleiformis
FD558480       --> ..................................................  Raphanus raphanistrum subsp. landra
FY447234       --> ..................................................  Raphanus sativus cv GSK3-1
FY446361       --> ..................................................  Raphanus sativus cv GSK3-1
FY452710       --> TGCGAGAACTATCTACTGCACTAACATCGACAAGAAGGTCACTCAAACGG  Raphanus sativus cv GSK3-1
EY941611       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY435603       --> ..................................................  Raphanus sativus cv GSK3-1
FY448811       --> ..................................................  Raphanus sativus cv GSK3-1
FY451089       --> TGCGAGAACTATCTACTGCACTAACATCGACAAGAAGGTCACTCAAACGG  Raphanus sativus cv GSK3-1
FY438295       --> TGCGAGAACTATCTACTGCACTAACATCGACAAGAAGGTCACTCAAACGG  Raphanus sativus cv GSK3-1
FY451175       --> TGCGAGAACTATCTACTGCACTAACATCGACAAGAAGGTCACTCAAACGG  Raphanus sativus cv GSK3-1
FY450119       --> TGCGAGAACTATCTACTGCACTAACATCGACAAGAAGGTCACTCAAACGG  Raphanus sativus cv GSK3-1
FD987948       --> TGCGAGAACTATCTATTGCACTAACATCGACAAGAAGGT-ACTCAAACGG  Raphanus raphanistrum subsp. landra
EV548590       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               901    -    951
UN03920        --> ACATAAAACTCTTCTTTGAGGCTGTGTGTGGAGAGGTATTACGTCTGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD554367       <-- ACATTAAACTCTTCTTTGAGGCTGTGTGTGGAGAGGTGTTACGTCTGAGG  Raphanus raphanistrum subsp. landra
FD983903       <-- ACATTAAACTCTTCTTTGAGGCTGTGTGTGGAGAGGTGTTACGTCTGAGG  Raphanus raphanistrum subsp. landra
FY442700       <-- ..................................................  Raphanus sativus cv GSK3-1
FY441651       --> ..................................................  Raphanus sativus cv GSK3-1
FY448395       --> ..................................................  Raphanus sativus cv GSK3-1
FD562895       --> ..................................................  Raphanus sativus var. oleiformis
EY933310       --> ..................................................  Raphanus sativus var. oleiformis
FD558480       --> ..................................................  Raphanus raphanistrum subsp. landra
FY447234       --> ..................................................  Raphanus sativus cv GSK3-1
FY446361       --> ..................................................  Raphanus sativus cv GSK3-1
FY452710       --> ACATAAAACTCTTCTTTGAGGCTGTGTGTGGAGAGGTATTACGTCTG...  Raphanus sativus cv GSK3-1
EY941611       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY435603       --> ..................................................  Raphanus sativus cv GSK3-1
FY448811       --> ..................................................  Raphanus sativus cv GSK3-1
FY451089       --> ACATAAAACTCTTCTTTGAGGCTGTGTGTGGAGAGGTATTACGTCTG...  Raphanus sativus cv GSK3-1
FY438295       --> ACATAAAACTCTTCTTTGAGGCTGTGTGTGGAGAGGTATTACGTCTGAGG  Raphanus sativus cv GSK3-1
FY451175       --> ACATAAAACTCTTCTTTGAGGCTGTGTGTGGAGAGGTATTACGTCTGAGG  Raphanus sativus cv GSK3-1
FY450119       --> ACATAAAACTCTTCTTTGAGGCTGTGTGTGGAGAGGTATTACG.......  Raphanus sativus cv GSK3-1
FD987948       --> ACATTAAACTCTTCTTTGAG..............................  Raphanus raphanistrum subsp. landra
EV548590       --> ..................gGGCTGTGTGTGGAGAGGCGTTACGTCTGAGG  Raphanus raphanistrum subsp. raphanistrum (NY)

               951    -   1001
UN03920        --> CTTTTGGGAGATTATCATCATCCAACTAGAATCGGTTTCGTTGAGTTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD554367       <-- CTTTTGGGAGATTATCATCATCCAACTAGAATCGGTTTCGTTGAGTTTGT
FD983903       <-- CTTTTGCGAGATTATCATCATCCAACTAGAATCGGTTTCGTTGAGTTTGT
FY442700       <-- ..TTTGGGAGATTATCATCATCCAACTAGAATCGGTTTCGTTGAGTTTGT
FY441651       --> ..................................................
FY448395       --> ..................................................
FD562895       --> ..................................................
EY933310       --> ..................................................
FD558480       --> ..................................................
FY447234       --> ..................................................
FY446361       --> ..................................................
FY452710       --> ..................................................
EY941611       --> ..................................................
FY435603       --> ..................................................
FY448811       --> ..................................................
FY451089       --> ..................................................
FY438295       --> CTTTTGGGAGATTATCATCATCCAACTAGAATCGGTTTCGTTGAGTTTGT
FY451175       --> CTTTTGGGAGATTATCATCATCCAACTAGAATCGGTTTCGTTGAGTTTGT
FY450119       --> ..................................................
FD987948       --> ..................................................
EV548590       --> CTTTTGGGAGATTATCATCATCCAACTAGAATCGGTTTCGTTGAGTTTGC

               1001   -   1051
UN03920        --> CATGGCTGAAAGTGCAATAACGGCTCTCAATTGCAGTGGCGTGCTTCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD554367       <-- CATGGCTGAAAGTGCAATAACGGCTCTCAATTGCAGTGGCGTGCTTCTTG
FD983903       <-- CATGGCTGAAAGTGCAATAACGGCTCTCAATTGCAGTGGCGTGCTTCTTG
FY442700       <-- CATGGCTGAAAGTGCAATAACGGCTCTCAATTGCAGTGGCGTGCTTCTTG
FY441651       --> ..................................................
FY448395       --> ..................................................
FD562895       --> ..................................................
EY933310       --> ..................................................
FD558480       --> ..................................................
FY447234       --> ..................................................
FY446361       --> ..................................................
FY452710       --> ..................................................
EY941611       --> ..................................................
FY435603       --> ..................................................
FY448811       --> ..................................................
FY451089       --> ..................................................
FY438295       --> CATGGCTGAAAGTGCA..................................
FY451175       --> CATGGC............................................
FY450119       --> ..................................................
FD987948       --> ..................................................
EV548590       --> CATGGCTGAAAGTGCAATAACGGCTCTCAATTGCAGTGGCGTGCTTCTTG

               1051   -   1101
UN03920        --> GTTCTTTACCGATAAGGGTGAGTCCCTCAAAGACACCTGTTCATTCCCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD554367       <-- GTTCTTTACCGATAAGGGTGAGTCCCTCAAAGACACCTGTTCATTCCCGT
FD983903       <-- GTTCTTTACCGATAAGGGTGAGTCCCTCAAAGACACCTGTTCATTCCCGT
FY442700       <-- GTTCTTTACCCATAAGGGTGAGTCCCTCAAAGACACCTGTTCGTTCCCGT
FY441651       --> ..................................................
FY448395       --> ..................................................
FD562895       --> ..................................................
EY933310       --> ..................................................
FD558480       --> ..................................................
FY447234       --> ..................................................
FY446361       --> ..................................................
FY452710       --> ..................................................
EY941611       --> ..................................................
FY435603       --> ..................................................
FY448811       --> ..................................................
FY451089       --> ..................................................
FY438295       --> ..................................................
FY451175       --> ..................................................
FY450119       --> ..................................................
FD987948       --> ..................................................
EV548590       --> GTTCTTTACCGATAAGGGTGAGTCCCTCAAAGACACCTGTTCATTCCCGT

               1101   -   1151
UN03920        --> GCTGTCCCTCGTCAACAACAGTAACAGCTACAAGTTTATTATACATATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD554367       <-- GCTGTCCCTCGTCAACAACAGCAACAGCTACAAGTTTATTATACATATAT
FD983903       <-- GCTGTCCCTCGTCAACAACAGTAACAGCTACAAGTTTATTATACATATAT
FY442700       <-- GCTGTCCCTCGACAACAACAGTAACAGCTACAAGTTTATTATACATATAT
FY441651       --> ..................................................
FY448395       --> ..................................................
FD562895       --> ..................................................
EY933310       --> ..................................................
FD558480       --> ..................................................
FY447234       --> ..................................................
FY446361       --> ..................................................
FY452710       --> ..................................................
EY941611       --> ..................................................
FY435603       --> ..................................................
FY448811       --> ..................................................
FY451089       --> ..................................................
FY438295       --> ..................................................
FY451175       --> ..................................................
FY450119       --> ..................................................
FD987948       --> ..................................................
EV548590       --> GCTGTCCCTCGTCAACAACAGTAACAGCTACAAGTTTATTATACATATAT

               1151   -   1201
UN03920        --> ATATATCTCTGCTCTCACCGGCATGTAAAGATGTTTGTCTGAAACTCTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD554367       <-- ATATATCTCTGCTCTCACCGGTATGTAAAGATGTTTGTCTGAAACTCTTA
FD983903       <-- ATATATCTCTGCTCTCACCGGCATGTAAAGATGTTTGTCTGAAACTCTTA
FY442700       <-- ATA--TCTCTGCTCTCACCGGCATGTAAAGATGTTTGTCTGAAACTCTTA
FY441651       --> ..................................................
FY448395       --> ..................................................
FD562895       --> ..................................................
EY933310       --> ..................................................
FD558480       --> ..................................................
FY447234       --> ..................................................
FY446361       --> ..................................................
FY452710       --> ..................................................
EY941611       --> ..................................................
FY435603       --> ..................................................
FY448811       --> ..................................................
FY451089       --> ..................................................
FY438295       --> ..................................................
FY451175       --> ..................................................
FY450119       --> ..................................................
FD987948       --> ..................................................
EV548590       --> ATATATCTCTGCTCTCACCGGCATGTAAAGATGTTTGTCTGAAACTCTTA

               1201   -   1251
UN03920        --> AAGTCTTTTGTTTTCCACTGTGTAATGCTTGGAAGCTTGATGATGCTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD554367       <-- AAGTCTTTTGTTTTCCACTGTGTAATGCTTGGAAGCTTGATGATGCTTCT
FD983903       <-- AAGTCTTTTGTTTTCCACTGTGTAATGCTTGGAAGCTTGATGATGCTTCT
FY442700       <-- AAGTCTTTTGTTTTCCTATGTGTAATGCTTGGAAGCTTGATGATGCTTCT
FY441651       --> ..................................................
FY448395       --> ..................................................
FD562895       --> ..................................................
EY933310       --> ..................................................
FD558480       --> ..................................................
FY447234       --> ..................................................
FY446361       --> ..................................................
FY452710       --> ..................................................
EY941611       --> ..................................................
FY435603       --> ..................................................
FY448811       --> ..................................................
FY451089       --> ..................................................
FY438295       --> ..................................................
FY451175       --> ..................................................
FY450119       --> ..................................................
FD987948       --> ..................................................
EV548590       --> AAGTCTTTTGTTTTCCACTGTGTAATGCTTGGAAGCTTGATGATGCTTCT

               1251   -   1301
UN03920        --> GTTGTCTTTTGCTTTGGGATACCTTTGGGTCGTAGGGAGTTTTAATTTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD554367       <-- GTTGTCTTTTGCTTTGGGATACCTTTGGGTCGTAGGGAGTTTTAATTTCG
FD983903       <-- GTTGTCTTTTGCTTTGGGATACCTTTGGGTCGTAGGGAGTTTTAATTTCG
FY442700       <-- GTTGTCTTTTGCTTTGGGATACTTTTGGGTCGTAGGGAGTTTTAATTTCG
FY441651       --> ..................................................
FY448395       --> ..................................................
FD562895       --> ..................................................
EY933310       --> ..................................................
FD558480       --> ..................................................
FY447234       --> ..................................................
FY446361       --> ..................................................
FY452710       --> ..................................................
EY941611       --> ..................................................
FY435603       --> ..................................................
FY448811       --> ..................................................
FY451089       --> ..................................................
FY438295       --> ..................................................
FY451175       --> ..................................................
FY450119       --> ..................................................
FD987948       --> ..................................................
EV548590       --> GTTGTCTTTTGCTTTGGGATACCTTTGGGTCGTAGGGAGTTTTAATTTCG

               1301   -   1351
UN03920        --> ATGTGGGTTTTAACTTTTAGAGAAAAGAAGTTACACAGAGCAGAAGAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD554367       <-- ATGTGGGTTTTAACTTTTAGAGAAAAGAAGTTACACAGAGCAGAAGAGAG
FD983903       <-- ATGTGGGTTTTAACTTTTAGAGAAAAGAAGTTACACAGAGCAGAAGAGAG
FY442700       <-- ATGTGGGTTTTAACTTTTAGAGAAAAGAAGTTACACAGAGCAGAAGAGAG
FY441651       --> ..................................................
FY448395       --> ..................................................
FD562895       --> ..................................................
EY933310       --> ..................................................
FD558480       --> ..................................................
FY447234       --> ..................................................
FY446361       --> ..................................................
FY452710       --> ..................................................
EY941611       --> ..................................................
FY435603       --> ..................................................
FY448811       --> ..................................................
FY451089       --> ..................................................
FY438295       --> ..................................................
FY451175       --> ..................................................
FY450119       --> ..................................................
FD987948       --> ..................................................
EV548590       --> ATGTGGGTTTTAACTTTTAGAGAAAAGAAGTTACACAGAGCAGAAGAGAG

               1351   -   1401
UN03920        --> AAACACTGAGAGTGAGGTTTGAAGATTGTCTCTGTTTAATGGGAGTTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD554367       <-- AAACACTGAGAGTGAGGTTTGAAGATTGTCTCTGTTTAATGGGAGTTTTT
FD983903       <-- AAACACTGAGAGTGAGGTTTGAAGATTGTCTCTGTTTAATGGGAGTTTTT
FY442700       <-- AAACACTGAGAGTGAGGTTTGAAGATTGTCTCTGTT-AATGGGAGTTTTT
FY441651       --> ..................................................
FY448395       --> ..................................................
FD562895       --> ..................................................
EY933310       --> ..................................................
FD558480       --> ..................................................
FY447234       --> ..................................................
FY446361       --> ..................................................
FY452710       --> ..................................................
EY941611       --> ..................................................
FY435603       --> ..................................................
FY448811       --> ..................................................
FY451089       --> ..................................................
FY438295       --> ..................................................
FY451175       --> ..................................................
FY450119       --> ..................................................
FD987948       --> ..................................................
EV548590       --> AAACACTGAGAGTGAGGTTTGAAGATTGTCTCTGTTTAATGGGAGTTTTT

               1401   -   1451
UN03920        --> AGTTATTTATACTGTTGT-GTTGGTCATGGACTTATTAGAAACCTGCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD554367       <-- AGTTATTTATACTGTTGT-GTTGGTCATGGACTTATTAGAAACCTGCTTT
FD983903       <-- AGTTATTTATACTGTTGT-GTTGGTCATGGACTTATTAGAAACCTGCTTT
FY442700       <-- AGTTATTTATACTGTTGTTGTTGCTCTTGGACTTATTAGAAACCTGCTTT
FY441651       --> ..................................................
FY448395       --> ..................................................
FD562895       --> ..................................................
EY933310       --> ..................................................
FD558480       --> ..................................................
FY447234       --> ..................................................
FY446361       --> ..................................................
FY452710       --> ..................................................
EY941611       --> ..................................................
FY435603       --> ..................................................
FY448811       --> ..................................................
FY451089       --> ..................................................
FY438295       --> ..................................................
FY451175       --> ..................................................
FY450119       --> ..................................................
FD987948       --> ..................................................
EV548590       --> AGTTATTTATACTGTTGT-GTTGGTCATGGACTTATTAGAAACCTGCTTT

               1451   -   1501
UN03920        --> TGTTCGTAAATGTTCTACATTTTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~
FD554367       <-- TGTTCGTAAATGTTCTACATTTTAT
FD983903       <-- TGTcc....................
FY442700       <-- TGTTCGTAAATGT............
FY441651       --> .........................
FY448395       --> .........................
FD562895       --> .........................
EY933310       --> .........................
FD558480       --> .........................
FY447234       --> .........................
FY446361       --> .........................
FY452710       --> .........................
EY941611       --> .........................
FY435603       --> .........................
FY448811       --> .........................
FY451089       --> .........................
FY438295       --> .........................
FY451175       --> .........................
FY450119       --> .........................
FD987948       --> .........................
EV548590       --> TGTTCGT..................