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Alignment for radish unigene UN04147

               1      -     51
UN04147        --> GGGGTCTTGGTGAAGTAGTAGAACCAAACTTCAAACATGATGCTTAATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910782       <-- ..................................................
EX767941       <-- ..................................................
FD574613       <-- ..................................................
EX899609       <-- ..................................................
FD976619       <-- ..................................................
EY914816       --> GGGGTCTTGGTGAAGTAGTAGAACCAAACTTCAAACATGATGCTTAATTG
FD980779       --> ...............................................ggG
EX763919       --> ..................................................
FD570646       --> ..................................................
EX895549       --> ..................................................

               51     -    101
UN04147        --> AAACCCTAGGTTTTGTCAAAAAAAACGTTGTCTATGCTTTTGAACAGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910782       <-- ..................................................
EX767941       <-- ..................................................
FD574613       <-- ..................................................
EX899609       <-- ..................................................
FD976619       <-- ..................................................
EY914816       --> AAACCCTAGGTTTTGCCAAAAAAAACGTTGTCTATGCTTTTGAACAGAGT
FD980779       --> AAACCCTAGGTTTTGTCAAAAAAAACGTTGTCTATGCTTTTGAACAGAGT
EX763919       --> ..................................................
FD570646       --> ..................................................
EX895549       --> ..................................................

               101    -    151
UN04147        --> ATCTGATATTAAAAAACGCCGCCTCTCTCTACGTTTTTTCCCTTTCATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910782       <-- ..................................................
EX767941       <-- ..................................................
FD574613       <-- ..................................................
EX899609       <-- ..................................................
FD976619       <-- ..................................................
EY914816       --> ATCTGATATTAAAAAACGCCGCCTCTCTCTACGTTTTTTCCCTTTCATCT
FD980779       --> ATCTGATATTAAAAAACGCCGCCTCTCTCTACGTTTTTTCCCTTTCATCT
EX763919       --> ...............ggGCCGCCTCTCTCTACGTTTTCTCCCTTCCATCT
FD570646       --> ..ggaaaacagataatctttggCTCTCTCTACGTTTTCTCCCTTCCATCT
EX895549       --> ..................................................

               151    -    201
UN04147        --> CTACAAACCCTAAAGCTTGAATCTCTTGCCTCTGGTCCGGCTCTAGTCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910782       <-- ..................................................
EX767941       <-- ..................................................
FD574613       <-- ..................................................
EX899609       <-- ..................................................
FD976619       <-- ..................................................
EY914816       --> CTACAAACCCTAAAGCTTGAATCTCTTGCCTCTGGTCCGGCTCTAGTCCG
FD980779       --> CTACAAACCCTAAAGCTTGAATCTCTTGCCTCTGGTCCGGCTCTAGTCCG
EX763919       --> CTACAAACCCTAAAGCTTGAATCTCTTGCCTCTGGTCCGGCTCTAGTCCG
FD570646       --> CTACAAACCCTAAAGCTTGAATCTCTTGCCTCTGGTCCGGCTCTAGTCCG
EX895549       --> ..................................................

               201    -    251
UN04147        --> GTACCGCAGGGCTCCTCTCTCCCTTTTCCTCCTTTTCTTTTTGCCTCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910782       <-- ..................................................
EX767941       <-- ..................................................
FD574613       <-- ..................................................
EX899609       <-- ..................................................
FD976619       <-- ..................................................
EY914816       --> GTACCGCAGGGCTCCTCTCTCCCTTTTCCTCCTTTTCTTTTTGCCTCCTT
FD980779       --> GTACCGCAGGGCTCCTCTCTCCCTTTTCCTCCTTTTCTTTTTGCCTCCTT
EX763919       --> GTACCGCAGGGCTCCTCTCTCCCTTTTCCTCCTTTTCTTTTTGCCTCCTT
FD570646       --> GTACCGGAGGGCTCCTCTCTCCCTTTTCCTCCTTTTCTTTTTGTCTCCTT
EX895549       --> ..................................................

               251    -    301
UN04147        --> CCGTTTGGTTTCTGTCTCAAATCGATATACTGGCTGTTCTGGTTCGTCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910782       <-- ..................................................
EX767941       <-- ..................................................
FD574613       <-- ..................................................
EX899609       <-- ..................................................
FD976619       <-- ..................................................
EY914816       --> CCGTTTGGTTTCTGTCTCAAATCGATATACTGGCTGTTCTGGTTCGTCGA
FD980779       --> CCGTTTGGTTTCTGTCTCAAATCGATATACTGGCTGTTCTGGTTCGTCGA
EX763919       --> CCGTTTGGTTTCTGTCTCAAATCGATATACTGGCTGTTCTGGTTCGTCGA
FD570646       --> CCGTTTGGTTTCTGTCTCAAATCGATATACTGGCTGTTCTGGTTCGTCGA
EX895549       --> ..................................................

               301    -    351
UN04147        --> GGCCTCGTCGGAGACTTATGGGTCAAAGGTGTCAGCTTGTGGCGTTTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910782       <-- ..................................................
EX767941       <-- ..................................................
FD574613       <-- ..................................................
EX899609       <-- ..................................................
FD976619       <-- ..................................................
EY914816       --> GGCCTCGTCGGAGACTTATGGGTCAAAGGTGTCAGCTTGTGGCGTTTCTG
FD980779       --> GGCCTCGTCGGAGACTTATGGGTCAAAGGTGTCAGCTTGTGGCGTTTCTG
EX763919       --> GGCCTCGTCGGAGACTTATGGGTCAAAGGTGTCAGCTTGTGGCGTTTCTG
FD570646       --> GGCCTCGTCGGAGACTTATGGGTCAAAGGTGTCAGCTTGTGGCGTTTCTG
EX895549       --> ..................................................

               351    -    401
UN04147        --> GAGGAGCGGTGAGGCTTGAACGAAGCTTTAGCGAAGGAGGTCGGCTTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910782       <-- ..................AACGAAGCTTTAGCGAAGGAGGTCGGCTTT-A
EX767941       <-- ..................................................
FD574613       <-- ..................................................
EX899609       <-- ..................................................
FD976619       <-- ..................................................
EY914816       --> GAGGAGCGGTGAGGCTTGAACGAAGCTTTAGCGAAGGAGGTCGGCTTTTA
FD980779       --> GAGGAGCGGTGAGGCTTGAACGAAGCTTTAGCTAAGGAGGTCGGCTTTTA
EX763919       --> GAGGAGCGGTGAGGCTTGAACGAAGCTTTAGCGAAGGAGGTCGGCTTTTA
FD570646       --> GAGGAGCGGTGAGGCTTGAACGAAGCTTTAGCGAAGGAGGTCGGCTTTTA
EX895549       --> ..................................................

               401    -    451
UN04147        --> GGGTCGAGGGGAGCCGCCAGATCAATTTTCCTTTTCCAGATCTACGGGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910782       <-- GGGTCGAGGGGAGCCGCCAGATCAATTTTCCTTTTCCAGATCTACGGGGC
EX767941       <-- ......AGGGGAGCCGCCAGATCAATTTTCCTTTTCCAGATCTACGGGGC
FD574613       <-- ..............................................GGGC
EX899609       <-- ..................................................
FD976619       <-- ..................................................
EY914816       --> GGGTCGAGGGGAGCCGCCAGATCAATTTTCCTTTTCCAGATCTACGGGGC
FD980779       --> GGGTCGAGGGGAGCCGCCAGATCAATTTTCCTTTTCCAGATCTACGGGGC
EX763919       --> GGGTCGAGGGGAGCCGCCAGATCAATTTTCCTTTTCCAGATCTACGGGGC
FD570646       --> GGGTCGAGGGGAGCCGCCAGATCAATTTTCCTTTTCCAGATCTACGGGGC
EX895549       --> ..................................................

               451    -    501
UN04147        --> TCTCTTCACGACAGGGGCGCGTGGCTCAGTGGGAGACCTCCTCTACCATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910782       <-- TCTCTTCACGACAGGGGCGCGTGGCTCAGTGGGAGACCTCCTCTACCATG
EX767941       <-- TCTCTTCACGACAGGGGCGCGTGGCTCAGTGGGAGACCTCCTCTACCATG
FD574613       <-- TCTCTTCACGACGGGGGCGCGTGGCTCAGTGGGAGACCTCCTCTACCATG
EX899609       <-- ..................................................
FD976619       <-- ..................................................
EY914816       --> TCTCTTCACGACAGGGGCGCGTGGCTCAGTGGGAGACCTCCTCTACCATG
FD980779       --> TCTCTTCACGACAGGGGCGCGTGGCTCAGTGGGAGACCTCCTCTACCATG
EX763919       --> TCTCTTCACGACAGGGGCGCGTGGCTCAGTGGGAGACCTCCTCTACCATG
FD570646       --> TCTCTTCACGACGGGGGCGCGTGGCTCAGTGGGAGACCTCCTCTACCATG
EX895549       --> ..................................................

               501    -    551
UN04147        --> GATCTATCGTCTGGAGTGACGGTGAGATTTCCGGAGGAGTGGTGCTTCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910782       <-- GATCTATCGTCTGGAGTGACGGTGAGATTTCCGGAGGAGTGGTGCTTCGG
EX767941       <-- GATCTATCGTCTGGAGTGACGGTGAGATTTCCGGAGGAGTGGTGCTTCGG
FD574613       <-- GATCTATCGTCTGGAGTGACGGTGAGATTTCCGGAGGAGTGGTGCCTCGG
EX899609       <-- ..................................................
FD976619       <-- ..................................................
EY914816       --> GATCTATCGTCTGGAGTGACGGTGAGATTTCCGGAGGAGTGGTGCTTCGG
FD980779       --> GATCTATCGTCTGGAGTGACGGTGAGATTTCCGGAGGAGTGGTGCTTCGG
EX763919       --> GATCTATCGTCTGGAGTGACGGTGAGATTTCCGGAGGAGTGGTGCTTCGG
FD570646       --> GATCTATCGTCTGGAGTGACGGTGAGATTTCCGGAGGAGTGGTGCCTCGG
EX895549       --> ..................................................

               551    -    601
UN04147        --> TTGGTGGAAGAAGGTCTGGTCCTCGGTTCTCGAGGTCAGCGCGTCGTAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910782       <-- TTGGTGGAAGAAGGTCTGGTCCTCGGTTCTCGAGGTCAGCGCGTCGTAGG
EX767941       <-- TTGGTGGAAGAAGGTCTGGTCCTCGGTTCTCGAGGTCAGCGCGTCGTAGG
FD574613       <-- TTGGTGGAAGAAGGTCTGGTCCTCGGTTCTCGAGGTCAGCGCGTCGTAGG
EX899609       <-- ........gGAAGGTCTGGTCCTCGGTTCTCGAGGTCAGCGCGTCGTAGG
FD976619       <-- ...................TCCTCGGTTCTCGAGGTCAGC--GTCGTAGG
EY914816       --> TTGGTGGAAGAAAGTCTGGTCCTCGGTTCTCGAGGTCAGCGCGTCGTAG-
FD980779       --> TTGGTGGAAGAAGGTCTGGTCCTCGGTTCTCGAGGTCAGCG--TCGTAGG
EX763919       --> TTGGTGGAAGAAGGTCTGGTCCTCGGTTCTCGAGGTCAGCGCGTCGTAGG
FD570646       --> TTGGTGGAAGAAGGTCTGGTCCTCGGTTCTCGAGGTCAGCGCGTCGTAGG
EX895549       --> ........gGAAGGTCTGGTCCTCGGTTCTCGAGGTCAGCGCGTCGTAGG

               601    -    651
UN04147        --> AATAGTCTCACGGAGGAGTCTACCGGAGAGACGAAGCCTGCAGTGGGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910782       <-- AATAGTCTCACGGAGGAGTCTACCGGAGAGACGAAGCCTGCAGTGGGTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX767941       <-- AATAGTCTCACGGAGGAGTCTACCGGAGAGACGAAGCCTGCAGTGGGTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD574613       <-- AATAGTCTCACGGAGGAGTCTACCGGAGAGACGAAGCCTGCAGTGGGTAC  Raphanus sativus cv Early Scarlet Globe
EX899609       <-- AATAGTCTCACGGAGGAGTCTACCGGAGAGACGAAGCCTGCAGTGGGTAC  Raphanus sativus cv Early Scarlet Globe
FD976619       <-- AATAGTCTCACGGAGGAGTCTACCGGAGAGACGAAGCCTGCAGTGGGTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914816       --> AATAGTCTCACGGAGGAGTCTACCGGAGAGACGAAGCCTGCAGTGGGTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD980779       --> AATAGTCTCACGGAGGAGTCTACCGGAGAGACGAAGCCTGCAGTGGGTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX763919       --> AATAGTCTCACGGAGGAGTCTACCGGAGAGACGAAGCCTGCAGTGGGTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570646       --> AATAGTCTCACGGAGGAGTCTACCGGAGAGACGAAGCCTGCAGTGGGTAC  Raphanus sativus cv Early Scarlet Globe
EX895549       --> AATAGTCTCACGGAGGAGTCTACCGGAGAGACGAAGCCTGCAGTGGGTAC  Raphanus sativus cv Early Scarlet Globe

               651    -    701
UN04147        --> ACGGTGACTCTCCATATCCCGACGCCGGAGTCTATTCGGCGATGGAGCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910782       <-- ACGGTGACTCTCCATATCCCGACGCCGGAGTCTATTCGGCGATGGAGCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX767941       <-- ACGGTGACTCTCCATATCCCGACGCCGGAGTCTATTCGGCGATGGAGCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD574613       <-- GCGGTGACTCTCCATATCCCGACGCCGGAGTCTATTCGGCGGTGGAGCCT  Raphanus sativus cv Early Scarlet Globe
EX899609       <-- GCGGTGACTCTCCATATCCCGACGCCGGAGTCTATTCGGCGGTGGAGCCT  Raphanus sativus cv Early Scarlet Globe
FD976619       <-- ACGGTGACTCTCCATATCCCGACGCCGGAGTCTATTCGGCGATGGAGCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914816       --> ACGGTGACTCTCCATATCCCGACGCCGGAGTCTATTCG-CGATGGAGCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD980779       --> ACGGTGACTCTCCATATCCCGACGCCGGAGTCTATTCGGCGATGGAGCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX763919       --> ACGGTGACTCTCCATATCCCGACGCCGGAGTCTATTCGGCGATGGAGCCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570646       --> GCGGTGACTCTCCATATCCCGACGCCGGAGTCTATTCGGCGGTGGAGCCT  Raphanus sativus cv Early Scarlet Globe
EX895549       --> GCGGTGACTCTCCATATCCCGACGCCGGAGTCTATTCGGCGGTGGAGCCT  Raphanus sativus cv Early Scarlet Globe

               701    -    751
UN04147        --> CACGCCTTTGAAAACTGATATTGCTGTTCCGGCTGCGGTGTCGTCGTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910782       <-- CACGCCTTTGAAAACTGATATTGCTTTTCCGGCTGCGGTGTCGTCGTCAA
EX767941       <-- CACGCCTTTGAAAACTGATATTGCTGTTCCGGCTGCGGTGTCGTCGTCAA
FD574613       <-- CACGCCTTTGAAAACTGATATTGCTGTTCCGGCTGCGGTGTCGTCGTCAA
EX899609       <-- CACGCCTTTGAAAACTGATATTGCTGTTCCGGCTGCGGTGTCGTCGTCAA
FD976619       <-- CACGCCTTTGAAAACTGATATTGCTTTTCCGGCTGCGGTGTCGTCGTCAA
EY914816       --> CACGCCTTTGAAA-CTGATATT............................
FD980779       --> CACGCCTTTGAAAACTGATATTGCT.........................
EX763919       --> CACGCCTTTGAAAACTGATATTGCTGTTCCGGCTGCGGTGTCGTC.....
FD570646       --> CACGCCTTTGAAA-CTGATATTGCTGTTCCG-CTGCGGTGTCGTC.....
EX895549       --> CACGCCTTTGAAAACTGATATTGCTGTTCCGGCTGCGGTGTCGTCGTCAA

               751    -    801
UN04147        --> GGCCCGACTTTCCAGTACGGGTTCATCCCGTCTTTGTGGCTTAGGAGCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910782       <-- GGCCCGACTTTCCAGTGCGGGTTCATCCCGTCTTTGTGGCTTAGGAGCGG
EX767941       <-- GGCCCGACTTTCCAGTACGGGTTCATCCCGTCTTTGTGGCTTAGGAGCGG
FD574613       <-- GGCCCGACTTTCCAGTACGGGTTCATCCCGTCTTTGTGGCTTAGGAGCGG
EX899609       <-- GGCCCGACTTTCCAGTACGGGTTCATCCCGTCTTTGTGGCTTAGGAGCGG
FD976619       <-- GGCCCGACTTTCCAGTGCGGGTTCATCCCGTCTTTGTGGCTTAGGAGCGG
EY914816       --> ..................................................
FD980779       --> ..................................................
EX763919       --> ..................................................
FD570646       --> ..................................................
EX895549       --> GGCCCGACTTTCCAGTACGGGTTCATCCCGTCTTTGTGGCTTAGGAGCGG

               801    -    851
UN04147        --> ACATTTGATCTTGGAGGTCTGGTCGGAACACCGGTTAGGCGCCGTAAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910782       <-- ACATTTGATCTTGGAGGTCTGGTCGGAACACCGGCTAGGCGCCGTAAGGT
EX767941       <-- ACATTTGATCTTGGAGGTCTGGTCGGAACACCGGTTATGCGCCGTAAGGT
FD574613       <-- ACATTTGATCTTGGAGGTCTGGTCGGAACACCGGTTAGGCGCCGTAAGGT
EX899609       <-- ACATTTGATCTTGGAGGTCTGGTCGGAACACCGTTTAGGCGCCGTAAGTT
FD976619       <-- ACATTTGATCTTGGAGGTCTGGTCGGAACACCGGCTAGGCGCCGTAAGGT
EY914816       --> ..................................................
FD980779       --> ..................................................
EX763919       --> ..................................................
FD570646       --> ..................................................
EX895549       --> ACATTTGATCTTGGAGGTCTGGTCGGAACACCGTTTAGGCGCCGTAAGTT

               851    -    901
UN04147        --> GAAGAGGTATTGGGCCGGGTCTGTCATTCCTATCATATGGAGCCCAATGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910782       <-- GAAGAGGTATTGGGCCGGGTCTGTCATTCCTATCATATGGAGCCCAATTC
EX767941       <-- GAAGAGGTATTGGGCCGGGTCTGTCATTCCTATCATATGGAGCCCAATGC
FD574613       <-- GAAGAGGTATTGGGCCGGGTCTGTCATTCCTATCATATGGAGCCCAATGC
EX899609       <-- GAAGAGGTATTGGGCCGGGTCTGTCATTCCTATCATATGGAGCCCAATGC
FD976619       <-- GAAGAGGTATTGGGCCGGGTCTGTCATTCCTATCATATGGAGCCCAATTC
EY914816       --> ..................................................
FD980779       --> ..................................................
EX763919       --> ..................................................
FD570646       --> ..................................................
EX895549       --> GAAGAGGTATTGGGCCGGGTCTGTCATTCCTATCATATGGAGCCCAATGC

               901    -    951
UN04147        --> AATGAGCTTCTCAAGACACTGGTATTACGGCCCGTCTATCTTGGGCTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910782       <-- AATGAGCTTCTCAAGACACTGGTATTACGGCCCGTCTATCTTGGGCTCTC
EX767941       <-- AATGAGCTTCTCAAGACACTGGTATTACGGTCCGTCTATCTTGGGCTCTC
FD574613       <-- AATGAGCTTCTCAAGACACTGGTATTACGGCCCGTCTATCTTGGGCTCTC
EX899609       <-- AATGAGCTTCTCAAGACACTGGTATTACGGCCCGTCTATCTTGGGCTCTC
FD976619       <-- AATGAGCTTCTCAAGACACTGGTATTACGGCCCGTCTATCTTGGGCTCTC
EY914816       --> ..................................................
FD980779       --> ..................................................
EX763919       --> ..................................................
FD570646       --> ..................................................
EX895549       --> AATGAGCTTCTCAAGACACTGGTATTACGGCCCGTCTATCTTGGGCTCTC

               951    -   1001
UN04147        --> AAGTGTTGTTGTCTCTTTGGGTCTAATTTAGGGGTTTAAGAGACTGCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910782       <-- AAGTGTTGTCGTCTCTTTGGGTCTAATTTAGGGGTTTAAGAGACTGCTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX767941       <-- AAGTGTTGTCGTCTCTTTGGGTCTAATTTAGGGGTTTAAGAGACTGTTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD574613       <-- AAGTGTTGTTGTCTCTTTGGGTCTAATTTACGGGTTTAAGAGACTGCTTT  Raphanus sativus cv Early Scarlet Globe
EX899609       <-- AAGTGTTGTTGTCTCTTTGGGTCTAATTTACGGGTTTAAGAGACTGCTTT  Raphanus sativus cv Early Scarlet Globe
FD976619       <-- AAGTGTTGTCGTCTCTTTGGGTCTAATTTAGGGGTTTAAGAGACTGCTTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914816       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD980779       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX763919       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570646       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX895549       --> AAGTGTTGTTGTCTCTTTGGGTCTAATTTACGGGTTTAAGAGACTGCTTT  Raphanus sativus cv Early Scarlet Globe

               1001   -   1051
UN04147        --> CCTTGAGTCGTGAGGAAGGTATGTTCTCATTGGGAAGAAAGTGCATCTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910782       <-- CCTTGAGTCGTGAGGAAGGTATGTTCTCATTGGGAAGAAAGTGCATCTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX767941       <-- CCTTGAGTCGTGAGGAAGGTATGTTCTCATTGGGAAGAAAGTGCATCTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD574613       <-- CCTTAAGTCGTGAGGAAGGTATGTTCTCATTGGGAAGAAAGTGCATCTGA  Raphanus sativus cv Early Scarlet Globe
EX899609       <-- CCTTAAGTCGTGAGGAAGGTATGTTCTCATTGGGAAGAAAGTGCATCTGA  Raphanus sativus cv Early Scarlet Globe
FD976619       <-- CCTTGAGTCGTGAGGAAGGTATGTTCTCATTGGGAAGAAAGTGCATCTGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914816       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD980779       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX763919       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD570646       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX895549       --> CCTTAAGTCGTGAGGAAGGTATGTTCTCATTGGGAAGAAAGTGCATCTGA  Raphanus sativus cv Early Scarlet Globe

               1051   -   1101
UN04147        --> GTTTCATGTCGGGTAGCTTAGGATCCAAATAAGTGATACTATGCGATACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910782       <-- GTTTCATGTCGGGTAGCTTAGGATCCAAATAAGTGATACTATGCGATACT
EX767941       <-- GTTTCATGTCGGGTAGCTTAGGATCCAAATAAGTGATACTATGCAATACT
FD574613       <-- GTTTCATGTCGGGTAGCTTAGGATCCAAATAAGTGATACTATGCGATACT
EX899609       <-- GTTTCATGTCGGGTAGCTTAGGATCCAAATAAGTGATACTATGCGATACT
FD976619       <-- GTTTCATGTCGGGTAGCTTAGGATCCAAATAAGTGATACTATGCGATACT
EY914816       --> ..................................................
FD980779       --> ..................................................
EX763919       --> ..................................................
FD570646       --> ..................................................
EX895549       --> GTTTCATGTCGGGTAGCTTAGGATCCAAATAAGTGATACTATGCGATACT

               1101   -   1151
UN04147        --> AGACTACTCAGTATGTAAGTGTGGTCGAACCGCTAGTGTGGTGAAATCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910782       <-- AGACTACTCAGTATGTAAGTGTGGTCGAACCGCTAGTGTGGTGAAATCAT
EX767941       <-- AGACTACTCAGTATGTAAGTGTGATCGAACCGCTAGTGTGGTGAAATCAT
FD574613       <-- AGACTACTCAGTATGTAAGTGTGGTCGAACCGCTAGTGTGGTGAAATCAT
EX899609       <-- AGACTACTCAGTATGTAAGTGTGGTCGAACCGCTAGTGTGGTGAAATCAT
FD976619       <-- AGACTACTCAGTATGTAAGTGTGGTCGAACCGCTAGTGTGGTGAAATCAT
EY914816       --> ..................................................
FD980779       --> ..................................................
EX763919       --> ..................................................
FD570646       --> ..................................................
EX895549       --> AGACTACTCAGTATGTAAGTGTGGTCGAACCGCTAGTGTGGTGAAATCAT

               1151   -   1201
UN04147        --> GTATTCCTTTGTTGGTGAATGAAAGTTGAAGTTGAGTTAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY910782       <-- GTATTCCTTTGTTGGTGAATGAAAGTTGAAGTTGAGc....
EX767941       <-- GTATTCCTTTGTTGGTGAATGAAAGTTGAAGTTGAatt...
FD574613       <-- GTATTCCTTTGTTGGTGAATGAAAGTTGAAGTTGAGTTAGG
EX899609       <-- GTATTCCTTTGTTGGTGAATGAAAGTTGAAGTTGAGT....
FD976619       <-- GTATTCCTTTGTTGGTGAATGAAAGTTGAAGTTGAGc....
EY914816       --> .........................................
FD980779       --> .........................................
EX763919       --> .........................................
FD570646       --> .........................................
EX895549       --> GTATTCCTTTGTTGGTGAATGAAAGTTGAAGTTGAGT....