Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN04512

               1      -     51
UN04512        --> AAGAAAACTTATCACAATTCTTATTTTGTTCGGTTTAACAACGGTCAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556913       <-- ............................gTCGGTTTA-C-ACGGTCAGGA
EW717003       <-- ..................................................
FD941667       <-- ..................................................
FD980742       <-- ..................................................
FD553130       --> AAGAAAACTTATCACAATTCTTATTTTGTTCGGTTTAACAACGGTCAGGA
FD976588       --> ..................................................
EW730797       --> ..................................................
FD548034       --> ..................................................
FD575265       --> ..................................................
FD937255       --> ..................................................

               51     -    101
UN04512        --> AAGAAAAGAAAAGAAATCATATCAATATTATACGTTACATTATATATGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556913       <-- AAGAAAAGAAAAGAAATCATATCAATATTATACGTTACATTATATATGCT
EW717003       <-- .........................TATTATACGTTACATTATATATGCT
FD941667       <-- ..................................................
FD980742       <-- ..................................................
FD553130       --> AAGAAAAGAAAAGAAATCATATCAATATTATACGTTACATTATATATGCT
FD976588       --> ..GAAAAGAAAAGAAATCATATCAATATTATACGTTACATTATATATGCT
EW730797       --> .........................TATTATACGTTACATTATATATGCT
FD548034       --> .........................TATTATACGTTACATTATATATGCT
FD575265       --> .........................TATTATACGTTACATTATATATGCT
FD937255       --> .........................TATTATACGTTACATTATATATGCT

               101    -    151
UN04512        --> TTATTGTTTCGCTTATGAAATGTACACAAGAAGTCAAGAACTCTTTTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556913       <-- TTATTGTT-CGCTTATGAAATGTACACAAGAAGTCAAGAACTCTTTTTT-
EW717003       <-- TTATTGTTTCGCTTATGAAATGTACACAAGAAGTCAAGAACTCTTTTTTT
FD941667       <-- ................................................TT
FD980742       <-- ..................................................
FD553130       --> TTATTGTTTCGCTTATGAAATGTACACAAGAAGTCAAGAACTCTTTTTTT
FD976588       --> TTATTGTTTCGCTTATGAAATGTACACAAGAAGTCAAGAACTCTTTTTTT
EW730797       --> TTATTGTTTCGCTTATGAAATGTACACAAGAAGTCAAGAACTCTTTTTTT
FD548034       --> TTATTGTTTCGCTTATGAAATGTACACAATAAGTCAAGAACTCTTTTTT-
FD575265       --> TTATTGTTTCGCTTATGAAATGTACACAAGAAGTCAAGAACTCTTTTTTT
FD937255       --> TTATTGTTTCGCTTATGAAATGTACACAAGAAGTCAAGAACTCTTTTTTT

               151    -    201
UN04512        --> CTCATAAGACAACAAAGAGCACAATCGCTAGATTAGGACACACGGGTAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556913       <-- CTCATAAGACAACAAAGAGCACAATCGCTAGATTAGGACACACGGGTAAC
EW717003       <-- CTCATAAGACAACAAAGAGCACAATCGCTAGATTAGGACACACGGGTAAC
FD941667       <-- CTCATAAGACA-CAAAGAGCACAATCGCTAGATTAGGACACACGGGTAAC
FD980742       <-- ..................................................
FD553130       --> CTCATAAGACAACAAAGAGCACAATCGCTAGATTAGGACACACGGGTAAC
FD976588       --> CTCATAAGGCAACAAAGAGCACAATCGCTAGATTAGGACACACGGGTAAC
EW730797       --> CTCATAAGACAACAAAGAGCACAATCGCTAGATTAGGACACACGGGTAAC
FD548034       --> CTCATAAGACAGCAAAGAGCACAATCGCTAGATTAGGACACACGGGTAAC
FD575265       --> CTCATAAGACAACAAAGAGCACAATCGCTAGATTAGGACACACGGGTAAC
FD937255       --> CTCATAAGACAACAAAGAGCACAATCGCTAGATTAGGACACACGGGTAAC

               201    -    251
UN04512        --> TGCAGCATGTATAGCATCAGCGAGTTGGGAAACTGTCTTAGAACTTAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556913       <-- TGCAGCATGTATAGCATCAGCGAGTTGGGAAACTGTCTTAGAACTTAGAC
EW717003       <-- TGCAGCATGTATAGCATCAGCGAGTTGGGAAACTGTCTTAGAACTTAGAC
FD941667       <-- TGCAGCATGTATAGCATCAGCGAGTTGGGAAACTGTCTTAGAACTTAGAC
FD980742       <-- ..................................................
FD553130       --> TGCAGCATGTATAGCATCAGCGAGTTGGGAAACTGTCTTAGAACTTAGAC
FD976588       --> TGCAGCATGTATAGCATCAGCGAGTTGGGAAACTGTCTTAGAACTTAGAC
EW730797       --> TGCAGCATGTATAGCATCAGCGAGTTGGGAAACTGTCTTAGAACTTAGAC
FD548034       --> TGCAGCATGTATAGCATCAGCGAGTTGGGAAACTGTCGTAAAACTTAAAC
FD575265       --> TGCAGCATGTATAGCATCAGTGAGTTGGGAAACTGTCTTAGAACTTAAAC
FD937255       --> TGCAGCATGTATAGCATCAGCGAGTTGGGAAACTGTCTTAAAACTTAGAC

               251    -    301
UN04512        --> CTGCAATGCTTACCCTCCCGTTATGAATCATGTAAATGTGATACTCTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556913       <-- CTGCAATGCTTACCCTCCCGTTATGAATCATGTAAATGTGATACTCTTTA
EW717003       <-- CTGCAATGCTTACCCTCCCGTTATGAATCATGTAAATGTGATACTCTTTG
FD941667       <-- -TGCAATGCTTACCCTCCCGTTATGAATCATGTAAATGTGATACTCTTTG
FD980742       <-- ..................................................
FD553130       --> CTGCAATGCTTACCCTCCCGTTATGAATCATGTAAATGTGATACTCTTTA
FD976588       --> CTGCAATGCTTACCCTCCCGTTATGAATCATGTAAATGTGATACTCTTTG
EW730797       --> CTGCAATGCTTACCCTCCCGTTATGAATCATGTAAATGTGATACTCTTTG
FD548034       --> CTGCAATGCTTACCCTCCCGTTATGAGTCATATAAATGTGATAATCTTTG
FD575265       --> CTGCAATGCTTACCCTCCCGTTATGAATCATGTAAATGTGATACTCTTTG
FD937255       --> CTGCAATGCTTACCCTCCCGTTATGAATCATGTAAATGTGATACTCTTTG

               301    -    351
UN04512        --> GCTATGAAGCGAACTTGCTTCTCATTCAACCCCGTAAAACTAAACATCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556913       <-- GCTATGAAGCGAACTTGCTTCTCATTCAACCCCGTAAAACTAAACATCCC
EW717003       <-- GCTATGAAGCGAACTTGCTTCTCATTCAACCCCGTAAAACTAAACATCCC
FD941667       <-- GCTATGAAGCGAACTTGCTTCTCATTCAACCCCGTAAAACTAAACATCCC
FD980742       <-- ..................................................
FD553130       --> GCTATGAAGCGAACTTGCTTCTCATTCAACCCCGTAAAACTAAACATCCC
FD976588       --> GCTATGAAGCGAACTTGCTTCTCATTCAACCCCGTAAAACTAAACATCCC
EW730797       --> GCTATGAAGCGAACTTGCTTCTCATTCAACCCCGTAAAACTAAACATCCC
FD548034       --> GCTATGAAGCGAACTTGCTTCTCATTCAGCCCCGTAAAACTAAACATCCC
FD575265       --> GCTATGAAGCGAACTTGCTTCTCATTCAACCCCGTAAAACTAAACATCCC
FD937255       --> GCTATGAAGCGAACTTGCTTCTCATTCAACCCCGTAAAACTAAACATCCC

               351    -    401
UN04512        --> AATCTGTCTGATAATGTGACTCCAGTCACCAGGTGTGCCTCTAGCTTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556913       <-- AATCTGTCTGATAATGTGACTCCAGTCACCAGGTGTGCCTCTAGCTTGTA  Raphanus raphanistrum subsp. landra
EW717003       <-- AATCTGTCTGATAATATGACTCCAGTCACCAGGTGTGCCTCTAGCTTGAA  Raphanus sativus var. oleiformis
FD941667       <-- AATCTGTCTGATAATATGACTCCAGTCACCAGGTGTGCCTCTAGCTTGAA  Raphanus sativus var. oleiformis
FD980742       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD553130       --> AATCTGTCTGATAATGTGACTCCAGTCACCAGGTGTGCCTCTAGCTTGTA  Raphanus raphanistrum subsp. landra
FD976588       --> AATCTGTCTGATAATGTGACTCCAGTCACCAGGTGTGCCTCTAGCTTGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW730797       --> AATCTGTCTGATAATGTGACTCCAGTCACCAGGTGTGCCTCTAGCTTGAA  Raphanus sativus cv Early Scarlet Globe
FD548034       --> AATCTGTCTGATAATGTGACTCCAGTCACCAGGTGTGCCTCTAGCTTGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD575265       --> AATCTGTCTGATAATGTGACTCCAGTCACCAGGTGTGCCTCTAGCTTGAA  Raphanus sativus cv Early Scarlet Globe
FD937255       --> AATCTGTCTGATAATATGACTCCAGTCACCAGGTGTGCCTCTAGCTTGAA  Raphanus sativus var. oleiformis

               401    -    451
UN04512        --> AAGCTTCATATAACTGTTTTCGCATGCTAAGTATGCGGTTAGCCATTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556913       <-- AAGCTTCATATAACTGTTTTCGCATACTAAGTATGCGTTTAGCCATTCCT
EW717003       <-- AAGCTTCATATAACTGTTTTCGCATGCTAAGTATGCGGTTAGCCATTCCT
FD941667       <-- AAGCTTCATATAACTGTTTTCGCATGCTAAGTATGCGGTTAGCCATTCCT
FD980742       <-- ..................................................
FD553130       --> AAGCTTCATATAACTGTTTTCGCATACTAAGTATGCGTTTAGCCATTCCT
FD976588       --> AAGCTTCATATAACTGTTTTCGCATGCTAAGTATGCGTTTAGCCATTCCT
EW730797       --> AAGCTTCATATAACTGTTTTCGCATGCTAAGTATGCGGTTAGCCATTCCT
FD548034       --> AAGCTTCATATAACTGTTTTCGCATGCTAAGTATGCGGTTAGCCATTCCT
FD575265       --> AAGCTTCATATAGCTGTTTTCGCATGCTAAGTATGCGGTTAGCCATTCCT
FD937255       --> AAGCTTCATATAACTGTTTTCGCATGCTAAGTATGCGGTTAGCCATTCCT

               451    -    501
UN04512        --> TTCAGCTCAACCGTCCAGTCATTGTACAAATCACTATTTTTAAGAATTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556913       <-- TTCAGCTCAACCGTCCAGTCATTGTACAAATCACTATTTTTAAGAATTGT
EW717003       <-- TTCAGCTCAACCGTCCAGTCATTGTACAAATCACTATTTTTAAGAATTGT
FD941667       <-- TTCAGCTCAACCGTCCAGTCATTGTACAAATCACTATTTTTAAGAATTGT
FD980742       <-- ..................................................
FD553130       --> TTCAGCTCAACCGTCCAGTCATTGTACAAATCACTATTTTTAAGAATTGT
FD976588       --> TTCAGCTCAACCGTCCAGTCATTGTACAAATCACTATTTTTAAGAATTGT
EW730797       --> TTCAGCTCAACCGTCCAGTCATTGTACAAATCACTATTTTTAAGAATTGT
FD548034       --> TTCAGCTCAACCGTCCAGTCATTGTACAAATCACTATTTTTAAGAATTGT
FD575265       --> TTCAGCTCAACCGTCCAGTCATTGTACAAATCACTATTTTTAAGAATTGT
FD937255       --> TTCAGCTCAACCGTCCAGTCATTGTACAAATCACTATTTTTAAGAATTGT

               501    -    551
UN04512        --> GGTAACGATGGATGCTCCATGAATAGGTGGGCTAAGATACATAGGTCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556913       <-- GGTAACGATGGATGCTCCATGAATAGGTGGGCTAAGATACATAGGTCTCA
EW717003       <-- GGTAACGATGGATGCTCCATGAATAGGTGGGCTAAGATACATAGGTCTCA
FD941667       <-- GGTAACGATGGATGCTCCATGAATAGGTGGGCTAAGATACATAGGTCTCA
FD980742       <-- ..................................................
FD553130       --> GGTAACGATGGATGCTCCATGAATAGGTGGGCTAAGATACATAGGTCTCA
FD976588       --> GGTAACGATGGATGCTCCATGAATAGGTGGGCTAAGATACATAGGTCTCA
EW730797       --> GGTAACGATGGATGCTCCATGAATAGGTGGGGTAAGATACATAGGTCTCA
FD548034       --> GGTAACAACGGATGCTCCATGAATAGGTGGGCTAAGATACATAGGTCTCA
FD575265       --> GGTAACGATGGATGCTCCATGAATAGGTGGGCTAAGATACATAGGTCTCA
FD937255       --> GGTAACGATGGATGCTCCATGAATAGGTGGGCTAAGATACATAGGTCTCA

               551    -    601
UN04512        --> CAACAAGTAGCAGTTGGCTCTTTACTTTCCTAGCCACATCTTCTGAGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556913       <-- CAACAAGTAGCAGTTGGCTCTTTACTTTCCTAGCCACATCTTCTGAGGTG
EW717003       <-- CAACAAGTAGCAGTTGACTCTTTACTTTCCTAGCCACATCTTCTGAGGTG
FD941667       <-- CAACAAGTAGCAGTTGGCTCTTTACTTTCCTAGCCACATCTTCTGAGGTG
FD980742       <-- ..................................................
FD553130       --> CAACAAGTAGCAGTTGGCTCTTTACTTTCCTAGCCACATCTTCTGAGGTG
FD976588       --> CAACAAGTAGCAGTTGGCTCTTTACTTTCCTAGCCACATCTTCTGAGGTG
EW730797       --> CAACAAGTAGCAGTTGGCTCTTTACTTTCCTAGCCACATCTTCTGAGGTG
FD548034       --> CAACAAGT..........................................
FD575265       --> CAACAAGTAGCAGTTGGCTCTTTACTTTCCTAGCCACATCTTCTGAGGTG
FD937255       --> CAACAAGTAGCAGTTGGCTCTTTACTTTCCTAGCCACATCTTCTGAGGTG

               601    -    651
UN04512        --> CATACAATTGTAAGAGCGCCAATACGCTCTCCATAAAGACCCATATTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556913       <-- CATACAATTGTAAGAGCGCCAATACGCTCTCCATAAAGACCCATATTTTT
EW717003       <-- CATACAATTGT.......................................
FD941667       <-- CATACAATTGTAAGAGCGCCAATACGATCTCCATAAAGACCCATATTTTT
FD980742       <-- ..................................................
FD553130       --> CATACAATTGTAAGAGCGCCAATACGCTCTCCATAAAGACCCATATTTTT
FD976588       --> CATACAATTGTAAGAGCGCCAATACGCTCTCCATAAAGACCCATATTTTT
EW730797       --> CATACAATTGTAAGAGCGCCAATACGCTCTCCATAAAGACCCATATTTTT
FD548034       --> ..................................................
FD575265       --> CATACAATTGTAAGAGCGCCAATACGCTCTCCATAAAGACCCATATTTTT
FD937255       --> CATACAATTGTAAGAGCGCCAATACGATCTCCATAAAGACCCATATTTTT

               651    -    701
UN04512        --> GGCAAAACTTTGAGCTATCAAACATTCACCTCCATCAGCAACAAACATAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556913       <-- GGCAAAACTTTGAGCTATCAAACATTCACCTCCATCAGCAACAAACATAC
EW717003       <-- ..................................................
FD941667       <-- GGCAAAACTTTGAGCTATCAAACATTCACCTCCATCAGCAACAAACATAC
FD980742       <-- ..................................................
FD553130       --> GGCAAAACTTTGAGCTATCAAACATTCACCTCCATCAGCAACAAACATAC
FD976588       --> GGCAAAACTTTGAGCTATCAAACATTCACCTCCATCAGCAACAAACATAC
EW730797       --> GGCAAAACTTTGAGCTATCAAACATTCACCTCCATCAGCAACAAACATAC
FD548034       --> ..................................................
FD575265       --> GGCAAAACTCTGAGCTATCAAACATTCACCTCCATCAGCAACAAACATAC
FD937255       --> GGCAAAACTTTGAGCTATCAAACATTCACCTCCATCAGCAACAAACATAC

               701    -    751
UN04512        --> GAACCGCTTGTGCATCTGACTCAAGGTTACCACTAGCAAAACCCTGATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556913       <-- GAACCGCTTGTGCATCTGACTCAAGGTTACCACTAGCAAAACCCTGATAT
EW717003       <-- ..................................................
FD941667       <-- GAACCGCTTGTGCATCTGATTCAAGGTTACCACTAGCAAAACCCTGATAT
FD980742       <-- ..................................................
FD553130       --> GAACCGCTTGTGCATCTGACT.............................
FD976588       --> GAACCGCTTGTGCATCTGACTCAAGGTTACCACTAGCAAAACCCTGATAT
EW730797       --> GAACCGCTTGTGCATCTGACTCAAGGTTACCACTAGCAAAACCCTGATAT
FD548034       --> ..................................................
FD575265       --> GAACCGCTTGTGCATCTGAC..............................
FD937255       --> GAACCGCTTGTGCATCTGATTCAAGGTTACCACTAGCAAAACCCTGATAT

               751    -    801
UN04512        --> GCATTATCAAAGAAGGGTAATAAGCTTTTAGATCTCACTACTTGCCGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556913       <-- GCATTATCc.........................................
EW717003       <-- ..................................................
FD941667       <-- GCATTATCAAAGAAGGGTAATAAGCTTTTAGATCTCACTACTTGCCGAAT
FD980742       <-- .................................................T
FD553130       --> ..................................................
FD976588       --> GCATTATCAAAGAAGGGTAATAAGCTTTTAGATCTCACTACTTGCCGAAT
EW730797       --> GCATTATCAAAGAAGGGTAATAAGCTTTTAGATCTCACAACTTGCCGAAT
FD548034       --> ..................................................
FD575265       --> ..................................................
FD937255       --> GCATTATCAAAGAAGGGTAATAAGCTTTTAGATCTCACTACTTGCCGAAT

               801    -    851
UN04512        --> CTGTTCCCATTGCTCGAGTGTTGGATCAACTCCAGTGGGGTTATGCGCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556913       <-- ..................................................
EW717003       <-- ..................................................
FD941667       <-- CTGTTCCCATTGCTCGAGTGTTGGATCAACTCCAGTGGGGTTATGCGCGC
FD980742       <-- CTGTTCCCATTGCTCGAGTGTTGGATCAACTCCAGTGGGGTTATGCGCGC
FD553130       --> ..................................................
FD976588       --> CTGTTCCCATTGCTCGAGTGTTGGATCA-CTCCAGTGGGGTTATGCGCGC
EW730797       --> CTGT-CCCATTGCTCGAGTGTTGGA.........................
FD548034       --> ..................................................
FD575265       --> ..................................................
FD937255       --> CTG...............................................

               851    -    901
UN04512        --> AAGCTTGCAATACCACTATAGCTCCAGTCGGTGCAGTGCCAAGATCCTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556913       <-- ..................................................
EW717003       <-- ..................................................
FD941667       <-- AAGCTTGCAATc......................................
FD980742       <-- AAGCTTGCAATACCACTATAGCTCCAGTCGGTGCAGTGCCAAGATCCTCG
FD553130       --> ..................................................
FD976588       --> AAGCTTGCAATACCACTATAGC............................
EW730797       --> ..................................................
FD548034       --> ..................................................
FD575265       --> ..................................................
FD937255       --> ..................................................

               901    -    951
UN04512        --> AGCATGCCTTTGAAGTCAAGTCCTCTGGTTTTCGGATCATAGTAACGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556913       <-- ..................................................
EW717003       <-- ..................................................
FD941667       <-- ..................................................
FD980742       <-- AGCATGCCTTTGAAGTCAAGTCCTCTGGTTTTCGGATCATAGTAACGGAA
FD553130       --> ..................................................
FD976588       --> ..................................................
EW730797       --> ..................................................
FD548034       --> ..................................................
FD575265       --> ..................................................
FD937255       --> ..................................................

               951    -   1001
UN04512        --> ATATTCTACAGACAAACCCGCCAAACTGAAAATGATAGGATGGTTCCCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556913       <-- ..................................................
EW717003       <-- ..................................................
FD941667       <-- ..................................................
FD980742       <-- ATATTCTACAGACAAACCCGCCAAACTGAAAATGATAGGATGGTTCCCCC
FD553130       --> ..................................................
FD976588       --> ..................................................
EW730797       --> ..................................................
FD548034       --> ..................................................
FD575265       --> ..................................................
FD937255       --> ..................................................

               1001   -   1051
UN04512        --> ACGTTGGGTTTGAAACGAACACGACACGTTCTTGCTTGTGCTTTGCTAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556913       <-- ..................................................
EW717003       <-- ..................................................
FD941667       <-- ..................................................
FD980742       <-- ACGTTGGGTTTGAAACGAACACGACACGTTCTTGCTTGTGCTTTGCTAAA
FD553130       --> ..................................................
FD976588       --> ..................................................
EW730797       --> ..................................................
FD548034       --> ..................................................
FD575265       --> ..................................................
FD937255       --> ..................................................

               1051   -   1101
UN04512        --> AACTCAGCTCCAACTCTCAAAGAACCAGTACCAGACAAACACTGGATAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556913       <-- ..................................................
EW717003       <-- ..................................................
FD941667       <-- ..................................................
FD980742       <-- AACTCAGCTCCAACTCTCAAAGAACCAGTACCAGACAAACACTGGATAGT
FD553130       --> ..................................................
FD976588       --> ..................................................
EW730797       --> ..................................................
FD548034       --> ..................................................
FD575265       --> ..................................................
FD937255       --> ..................................................

               1101   -   1151
UN04512        --> AACAACTCTGTTCTCTTCCACTGCATGACTATCATCACCTAAGATGAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556913       <-- ..................................................
EW717003       <-- ..................................................
FD941667       <-- ..................................................
FD980742       <-- AACAACTCTGTTCTCTTCCACTGCATGACTATCATCACCTAAGATGAGCT
FD553130       --> ..................................................
FD976588       --> ..................................................
EW730797       --> ..................................................
FD548034       --> ..................................................
FD575265       --> ..................................................
FD937255       --> ..................................................

               1151   -   1201
UN04512        --> TGGAGCTCAATTTGTTAAACTCAGCAAGTCCATCAAGCGGAAGATATTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556913       <-- ..................................................
EW717003       <-- ..................................................
FD941667       <-- ..................................................
FD980742       <-- TGGAGCTCAATTTGTTAAACTCAGCAAGTCCATCAAGCGGAAGATATTCC
FD553130       --> ..................................................
FD976588       --> ..................................................
EW730797       --> ..................................................
FD548034       --> ..................................................
FD575265       --> ..................................................
FD937255       --> ..................................................

               1201   -   1251
UN04512        --> TTGTCCCGGGACCTTGAGGTAGACCAAAAAATAAAAATAGTAATAATAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556913       <-- ..................................................
EW717003       <-- ..................................................
FD941667       <-- ..................................................
FD980742       <-- TTGTCCCGGGACCTTGAGGTAGACCAAAAAATAAAAATAGTAATAATAAC
FD553130       --> ..................................................
FD976588       --> ..................................................
EW730797       --> ..................................................
FD548034       --> ..................................................
FD575265       --> ..................................................
FD937255       --> ..................................................

               1251   -   1301
UN04512        --> AAACAAGAAACCAAAAAGCAAGCCATCTCACAATTTGAAGAACAAGAGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556913       <-- ..................................................
EW717003       <-- ..................................................
FD941667       <-- ..................................................
FD980742       <-- AAACAAGAAACCAAAAAGCAAGCCATCTCACAATTTGAAGAACAAGAGGC
FD553130       --> ..................................................
FD976588       --> ..................................................
EW730797       --> ..................................................
FD548034       --> ..................................................
FD575265       --> ..................................................
FD937255       --> ..................................................

               1301   -   1351
UN04512        --> TTACAGGTCATTCGCCAACTGTTGCTCAGCTCGTCTCACAACCTGAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556913       <-- ..................................................
EW717003       <-- ..................................................
FD941667       <-- ..................................................
FD980742       <-- TTACAGGTCATTCGCCAACTGTTGCTCAGCTCGTCTCACAACCTGAAGAA
FD553130       --> ..................................................
FD976588       --> ..................................................
EW730797       --> ..................................................
FD548034       --> ..................................................
FD575265       --> ..................................................
FD937255       --> ..................................................

               1351   -   1401
UN04512        --> CAAGAGGCTTTCCTTCCTCAGACCGATAGGAACCACCACTCAAATTCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556913       <-- ..................................................
EW717003       <-- ..................................................
FD941667       <-- ..................................................
FD980742       <-- CAAGAGGCTTTCCTTCCTCAGACCGATAGGAACCACCACTCAAATTCAAC
FD553130       --> ..................................................
FD976588       --> ..................................................
EW730797       --> ..................................................
FD548034       --> ..................................................
FD575265       --> ..................................................
FD937255       --> ..................................................

               1401   -   1451
UN04512        --> TTAACCGGACTAGGATCATCTCTACTCGCAAAATATACAGTGAGTATAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556913       <-- ..................................................
EW717003       <-- ..................................................
FD941667       <-- ..................................................
FD980742       <-- TTAACCGGACTAGGATCATCTCTACTCGCAAAATATACAGTGAGTATAGG
FD553130       --> ..................................................
FD976588       --> ..................................................
EW730797       --> ..................................................
FD548034       --> ..................................................
FD575265       --> ..................................................
FD937255       --> ..................................................

               1451   -   1501
UN04512        --> ATCTTCTGGAGCTGGGACAATGTTTGAAAAACTTGAATCCATGAGAAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556913       <-- ..................................................
EW717003       <-- ..................................................
FD941667       <-- ..................................................
FD980742       <-- ATCTTCTGGAGCTGGGACAATGTTTGAAAAACTTGAATCCATGAGAAAAC
FD553130       --> ..................................................
FD976588       --> ..................................................
EW730797       --> ..................................................
FD548034       --> ..................................................
FD575265       --> ..................................................
FD937255       --> ..................................................

               1501   -   1551
UN04512        --> GTTTGACTCAGTTGAAGTGTTGAAGTGAATTTGGATATCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD556913       <-- .........................................
EW717003       <-- .........................................
FD941667       <-- .........................................
FD980742       <-- GTTTGACTCAGTTGAAGTGTTGAAGTGAATTTGGATATCCC
FD553130       --> .........................................
FD976588       --> .........................................
EW730797       --> .........................................
FD548034       --> .........................................
FD575265       --> .........................................
FD937255       --> .........................................