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Alignment for radish unigene UN04804

               1      -     51
UN04804        --> GAATAAGAAAATCATTGTTTCAGCATTAGAACAATTTTTTTACACATTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD558125       <-- ..................................................
FD558686       <-- ..................................................
FY435880       <-- ..................................................
FD559808       <-- ..................................................
FY449001       <-- ..................................................
FY433909       <-- ..................................................
FD559399       <-- ..................................................
FY452936       <-- ..................................................
FY454340       <-- ..................................................
FY446775       <-- ..................................................
FD555107       --> GAATAAGAAAATCATTGTTTCAGCATTAGAACAATTTTTTTACACATTTC

               51     -    101
UN04804        --> GAGAAATAAAGCAAAAGAAATGTTTTGGAATCAAATAAAACATGGGTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD558125       <-- ..................................................
FD558686       <-- ..................................................
FY435880       <-- ..................................................
FD559808       <-- ..................................................
FY449001       <-- ..................................................
FY433909       <-- ..................................................
FD559399       <-- ..................................................
FY452936       <-- ..................................................
FY454340       <-- ..................................................
FY446775       <-- ..................................................
FD555107       --> GAGAAATAAAGCAAAAGAAATGTTTTGGAATCAAATAAAACATGGGTTTG

               101    -    151
UN04804        --> AGATTTGTTTTACTTCTCAGTACATACATAAGGAGAAAGTGAAGAGACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD558125       <-- ..................................................
FD558686       <-- ..................................................
FY435880       <-- ..................................................
FD559808       <-- ..................................................
FY449001       <-- ..................................................
FY433909       <-- ..................................................
FD559399       <-- ..................................................
FY452936       <-- ..................................................
FY454340       <-- ..................................................
FY446775       <-- ..................................................
FD555107       --> AGATTTGTTTTACTTCTCAGTACATACATAAGGAGAAAGTGAAGAGACAA

               151    -    201
UN04804        --> TGGTAGTGACAAATCTATTAACCTTCTTCTCCAAACTC-TGTGTGA-TCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD558125       <-- ..............................tccAACTC-TGTGTGA-TCT
FD558686       <-- ..................................................
FY435880       <-- ..................................................
FD559808       <-- ..................................................
FY449001       <-- ..................................................
FY433909       <-- ..................................................
FD559399       <-- ..................................................
FY452936       <-- ..................................................
FY454340       <-- ..................................................
FY446775       <-- ..................................................
FD555107       --> TGGTAGTGACAAATCTATTAACCTTCTTCTCCAAACTCCTGTGTGAATCT

               201    -    251
UN04804        --> -TCATGACGTCAAG-TCAGATT-GCTCAC-GT-GGC-TCTGTCTAGCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD558125       <-- -TCATGACGTCAAG-TCAGATT-GCTCAC-GT-GGC-TCTGTCTAGCAAG
FD558686       <-- ..................................................
FY435880       <-- ..................................................
FD559808       <-- ..................................................
FY449001       <-- ..................................................
FY433909       <-- ..................................................
FD559399       <-- ..................................................
FY452936       <-- ..................................................
FY454340       <-- ..................................................
FY446775       <-- ..................................................
FD555107       --> CTCATGACGTCAAGGTCAGATTTGCTCACCGTTGGCCTCTGTCTAGCAAG

               251    -    301
UN04804        --> TAC-TTCTCGAAATCTGTTCTTGTGATTGGTGGTGGAATA-TCTTTTCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD558125       <-- TAC-TTCTCGAAATCTGT-C-TGTGATTGGTGGTGGAATA-TCTTT-CGG
FD558686       <-- ...............TGTTCTTGTGATTGGTGGTGGAATA-TCTTTTCGG
FY435880       <-- ..................................................
FD559808       <-- ..................................................
FY449001       <-- ..................................................
FY433909       <-- ..................................................
FD559399       <-- ..................................................
FY452936       <-- ..................................................
FY454340       <-- ..................................................
FY446775       <-- ..................................................
FD555107       --> TACCTTCTCGAAATCTGTTCTTGTGATTGGTGGTGGAATAATCTTTTCGG

               301    -    351
UN04804        --> CAAGGCCTTTAGCTGCTAAATCTTGCATTGTGGTTTGGATAGCTCCAGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD558125       <-- CAAGGCCTTTAGCTGCTAAATCTTGCATTGTGGTTTGGATAGCTCCAGGC
FD558686       <-- CAAGGC-TTTAGCTGCTAAATCTTGCATTGTGGTTTGGATAGCTCCAGGC
FY435880       <-- ..AGGCCTTTAGCTGCTAAATCTTGCATTGTGGTTTGGATAGCTCCAGGC
FD559808       <-- .........TAGCTGCTAAATCTTGCATTGTGGTTTGGATAGCTCCAGGC
FY449001       <-- ...........GCTGCTAAATCTTGCATTGTGGTTTGGATAGCTCCAGGC
FY433909       <-- .............TGCTAAATCT-GCATTTGTGTTTGGATAGCTCCAGGC
FD559399       <-- ..................................................
FY452936       <-- ..................................................
FY454340       <-- ..................................................
FY446775       <-- ..................................................
FD555107       --> CAAGGCCTTTAGCTGCTAAATCTTGCATTGTGGTTTGGATAGCTCCAGGC

               351    -    401
UN04804        --> TGCCTCGGTCCACATGGCATCCATGTACCATCAGGTGACTTGAAAAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD558125       <-- TGCCTCGGTCCACATGGCATCCATGTACCATCAGGTGACTTAAAAAAGAA
FD558686       <-- TGCCTCGGTCCACATGGCATCCATGTACCATCAGGTGACTTAAAAAAGAA
FY435880       <-- TGCCTCGGTCCACATGGCATCCATGTACCATCAGGTGACTTGAAAAAGAA
FD559808       <-- TGCCTCGGTCCACATGGCATCCATGTACCATCAGGTGACTTGAAAAAGAA
FY449001       <-- TGCCTCGGTCCACATGGCATCCATGTACCATCAGGTGACTTGAAAAAGAA
FY433909       <-- TGCCTCGGTCCACATGGCATCCATGTACCATCAGGTGACTTGAAAAAGAA
FD559399       <-- .........................TACCATCAGGTGACTT-AAAAAGAA
FY452936       <-- ..................................................
FY454340       <-- ..................................................
FY446775       <-- ..................................................
FD555107       --> TGCCTCGGTCCACATGGCATCCATGTACCATCAGGTGACTTAAAAAAGAA

               401    -    451
UN04804        --> CATTGCGTCTTGAGTTTTGCGAACAGGCTCAAAAAGGACATCTTTTACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD558125       <-- CATTGCGTCTTGAGTTTTGCGAACAGGCTCAAAAAGGACATCTTTTACAC
FD558686       <-- CATTGCGTCTTGAGTTTTGCGAACAGGCTCAAAAAGGACATCTTTTACAC
FY435880       <-- CATTGCGTCTTGAGTTTTGCGAACAGGCTCAAAAAGGACATCTTTTACAC
FD559808       <-- CATTGCGTCTTGAGTTTTGCGAACAGGCTCAAAAAGGACATCTTTTACAC
FY449001       <-- CATTGCGTCTTGAGTTTTGCGAACAGGCTCAAAAAGGACATCTTTTACAC
FY433909       <-- CATTGCGTCTTGAGTTTTGCGAACAGGCTCAAAAAGGACATCTTTTACAC
FD559399       <-- CATTGCGTCTTGAGTTT-GCGAACAGGCTCAAAAAGGACATCTTTTACAC
FY452936       <-- ..................................................
FY454340       <-- ..................................................
FY446775       <-- ..................................................
FD555107       --> CATTGCGTCTTGAGTTTTGCGAACAGGCTCAAAAAGGACATCTTTTACAC

               451    -    501
UN04804        --> AAACGGAAACATCTGAACCAGAAAACCCTTCTGTCTTGAGCCCCAAATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD558125       <-- AAACGGAAACATCTGAACCAGAAAACCCTTCTGTCTTGAGCCCCAAATAT
FD558686       <-- AAACGGAAACATCTGAACCAGAAAACCCTTCTGTCTTGAGCCCCAAATAT
FY435880       <-- AAACGGAAACATCTGAACCAGAAAACCCTTCTGTCTTGAGCCCCAAATAT
FD559808       <-- AAACGGAAACATCTGAACCAGAAAACCCTTCTGTCTTGAGCCCCAAATAT
FY449001       <-- AAACGGAAACATCTGAACCAGAAAACCCTTCTGTCTTGAGCCCCAAATAT
FY433909       <-- AAACGGAAACATCTGAACCAGAAAACCCTTCTGTCTTGAGCCCCAAATAT
FD559399       <-- AAACGGAAACATCTGAACCAGAAAACCCTTCTGTCTTGAGCCCCAAATAT
FY452936       <-- ..................................................
FY454340       <-- ..................................................
FY446775       <-- ..................................................
FD555107       --> AAACGGAAACATCTGAACCAGAAAACCCTTCTGTCTTGAGCCCCAAATAT

               501    -    551
UN04804        --> TCAAAATCAGATTCAGTTAAATTATGAGGCGTGTCTCCCAAATGAACTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD558125       <-- TCAAAATCAGATTCAGTTAAATTATGAGGCGTGTCTCCCAAATGAACTTT
FD558686       <-- TCAAAATCAGATTCAGTTAAATTATGAGGCGTGTCTCCCAAATGAACTTT
FY435880       <-- TCAAAATCAGATTCAGTTAAATTATGAGGCGTGTCTCCCAAATGAACTTT
FD559808       <-- TCAAAATCAGATTCAGTTAAATTATGAGGCGTGTCTCCCAAATGAACTTT
FY449001       <-- TCAAAATCAGATTCAGTTAAATTATGAGGCGTGTCTCCCAAATGAACTTT
FY433909       <-- TCAAAATCAGATTCAGTTAAATTATGAGGCGTGTCTCCCAAATGAACTTT
FD559399       <-- TCAAAATCAGATTCAGTTAAATTATGAGGCGTGTCTCCCAAATGAACTTT
FY452936       <-- ..................................................
FY454340       <-- ..................................................
FY446775       <-- ..................................................
FD555107       --> TCAAAATCAGATTCAGTTAAATTATGAGGCGTGTCTCCCAAATGAACTTT

               551    -    601
UN04804        --> GAACATGTGCTGCCTAGCCTTGGCTTCTGGGAGAGGAATATAAATACGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD558125       <-- GAACATGTGCTGCCTAGCCTTGGCTTCTGGGAGAGGAATATAAATACGTT
FD558686       <-- GAACATGTGCTGCCTAGCCTTGGCTTCTGGGAGAGGAATATAAATACGTT
FY435880       <-- GAACATGTGCTGCCTAGCCTTGGCTTCTGGGAGAGGAATATAAATACGTT
FD559808       <-- GAACATGTGCTGCCTAGCCTTGGCTTCTGGGAGAGGAATATAAATACGTT
FY449001       <-- GAACATGTGCTGCCTAGCCTTGGCTTCTGGGAGAGGAATATAAATACGTT
FY433909       <-- GAACATGTGCTGCCTAGCCTTGGCTTCTGGGAGAGGAATATAAATACGTT
FD559399       <-- GAACATGTGCTGCCTAGCCTTGGCTTCTGGGAGAGGAATATAAATACGTT
FY452936       <-- ..................................................
FY454340       <-- ..................................................
FY446775       <-- ..................................................
FD555107       --> GAACATGTGCTGCCTAGCCTTGGCTTCTGGGAGAGGAATATAAATACGTT

               601    -    651
UN04804        --> TATCAAAACGTCGCCTAATAGCCTGATCAAGAGCATAAGGTGTATTGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD558125       <-- TATCAAAACGTCGCCTAATAGCCTGATCAAGAGCATAAGGTGTATTGGTT
FD558686       <-- TATCAAAACGTCGCCTAATAGCCTGATCAAGAGCATAAGGTGTATTGGTT
FY435880       <-- TATCAAAACGTCGCCTAATAGCCTGATCAAGAGCATAAGGTGTATTGGTA
FD559808       <-- TATCAAAACGTCGCCTAATAGCCTGATCAAGAGCATAAGGTGTATTGGTA
FY449001       <-- TATCAAAACGTCGCCTAATAGCCTGATCAAGAGCATAAGGTGTATTGGTA
FY433909       <-- TATCAAAACGTCGCCTAATAGCCTGATCAAGAGCATAAGGTGTATTGGTA
FD559399       <-- TATCAAAACGTCGCCTAATAGCCTGATCAAGAGCATAAGGTGTATTGGTT
FY452936       <-- ..................................................
FY454340       <-- ..................................................
FY446775       <-- ..................................................
FD555107       --> TATCAAAACGTCGCCTAATAGCCTGATCAAGAGCATAAGGTGTATTGGTT

               651    -    701
UN04804        --> GCTGCAAGCACAAGTACTTTATCATCACTGTGTCCAACACCCTGCATCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD558125       <-- GCTGCAAGCACAAGTACTTTATCATCACTGTGTCCAACACCCTGCATCTG
FD558686       <-- GCTGCAAGCACAAGTACTTTATCATCACTGTGTCCAACACCCTGCATCTG
FY435880       <-- GCTGCAAGCACAAGTACTTTATCATCACTGTGTCCAACACCCTGCATCTG
FD559808       <-- GCTGCAAGCACAAGTACTTTATCATCACTGTGTCCAACACCCTGCATCTG
FY449001       <-- GCTGCAAGCACAAGTACTTTATCATCACTGTGTCCAACACCCTGCATCTG
FY433909       <-- GCTGCAAGCACAAGTACTTTATCATCACTGTGTCCAACACCCTGCATCTG
FD559399       <-- GCTGCAAGCACAAGTACTTTATCATCACTGTGTCCAACACCCTGCATCTG
FY452936       <-- ..................................................
FY454340       <-- ..................................................
FY446775       <-- ..................................................
FD555107       --> GCTGCAAGCACAAGTACTTTATCATCACTGTGTCCAACACCCTGCATCTG

               701    -    751
UN04804        --> CACAAGAAGCTCTGTTTTGATACGTCTTGAAGCTTCACTCTCGTTTCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD558125       <-- CACAAGAAGCTCTGTTTTGATACGTCTTGAAGCTTCACTCTCGTTTCCTT
FD558686       <-- CACAAGAAGCTCTGTTTTGATACGTCTTGAAGCTTCACTCTCGTTTCCTT
FY435880       <-- CACAAGAAGCTCTGTTTTGATACGTCTTGAAGCTTCACTCTCGTTTCCTT
FD559808       <-- CACAAGAAGCTCTGTTTTGATACGTCTTGAAGCTTCACTCTCGTTTCCTT
FY449001       <-- CACAAGAAGCTCTGTTTTGATACGTCTTGAAGCTTCACTCTCGTTTCCTT
FY433909       <-- CACAAGAAGCTCTGTTTTGATACGTCTTGAAGCTTCACTCTCGTTTCCTT
FD559399       <-- CACAAGAAGCTCTGTTTTGATACGTCTCGAAGCTTCACTCTCGTTTCCTT
FY452936       <-- ..................................................
FY454340       <-- ..................................................
FY446775       <-- ..................................................
FD555107       --> CACAAGAAGCTCTGTTTTGATACGTCTCGAAGCTTCACTCTCGTTTCCTT

               751    -    801
UN04804        --> CTCCACGTTGACCACACAAGGAATCTATCTCATCAACGAAAATAATCGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD558125       <-- CTCCACGTTGACCACACAAGGAATCTATCTCATCAACGAAAATAATCGAG
FD558686       <-- CTCCACGTTGACCACACAAGGAATCTATCTCATCAACGAAAATAATCGAG
FY435880       <-- CTCCACGTTGACCACACAAGGAATCTATCTCATCAACGAAAATAATCGAG
FD559808       <-- CTCCACGTTGACCACACAAGGAATCTATCTCATCAACGAAAATAATCGAG
FY449001       <-- CTCCACGTTGACCACACAAGGAATCTATCTCATCAACGAAAATAATCGAG
FY433909       <-- CTCCACGTTGACCACACAAGGAATCTATCTCATCAACGAAAATAATCGAG
FD559399       <-- CTCCACGTTGACCACACAAGGAATCTATCTCATCAACGAAAATAATCGAG
FY452936       <-- ...............ACAAGGAATCTATCTCATCAACGAAAATAATCGAG
FY454340       <-- ..................................................
FY446775       <-- ..................................................
FD555107       --> CTCCACGTTGACCACACAAG-AATCTATCTCATCAACGAAAATAATCGAG

               801    -    851
UN04804        --> GGAGAACTTTCACGGGCCATCTCGAAAAGGTTTGACACTAGCTTCTCACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD558125       <-- GGAGAACTTTCACGGGCCATCTCGAAAAGGTTTGACACTAGCTTCTCACT
FD558686       <-- GGAGAACTTTCACGGGCCATCTCGAAAAGGTTTGACACTAGCTTCTCACT
FY435880       <-- GGAGAACTTTCACGGGCCATCTCGAAAAGGTTTGACACTAGCTTCTCACT
FD559808       <-- GGAGAACTTTCACGGGCCATCTCGAAACGGTTTGACACTAGCTTCTCACT
FY449001       <-- GGAGAACTTTCACGGGCCATCTCGAAAAGGTTTGACACTAGCTTCTCACT
FY433909       <-- GGAGAACTTTCACGGGCCATCTCGAAAAGGTTTGACACTAGCTTCTCACT
FD559399       <-- GGAGAACTTTCACGGGCCATCTCGAAAAGGTTTGACACTAGCTTCTCACT
FY452936       <-- GGAGAACTTTCACGGGCCATCTCGAAAAGGTTTGACACTAGCTTCTCACT
FY454340       <-- ...........ACGGGCCATCTCGAAAAGGTTTGACACTAGCTTCTCACT
FY446775       <-- ..................................................
FD555107       --> Gagacttt..........................................

               851    -    901
UN04804        --> TTCACCCATCCACTTCGAGACCAGGTCTGATGAAGACACGCTAAAGAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD558125       <-- TTCACCCATCCACTTCGAGACCAGATCTGATGAAGACACGCTAAAGAAGG
FD558686       <-- TTCACCCATCCACTTCGAGACCAGATCTGATGAAGACACGCTAAAGAAGG
FY435880       <-- TTCACCCATCCACTTCGAGACCAGGTCTGATGAAGACACGCTAAAGAAGG
FD559808       <-- TTCACCCATCCACTTCGAGACCAGGTCTGATGAAGACACGCTAAAGAAGG
FY449001       <-- TTCACCCATCCACTTCGAGACCAGGTCTGATGAAGACACGCTAAAGAAGG
FY433909       <-- TTCACCCATCCACTTCGAGACCAGGTCTGATGAAGACACGCTAAAGAAGG
FD559399       <-- TTCACCCATCCACTTCGAGACCAGATCTGATGAAGACACGCTAAAGAAGG
FY452936       <-- TTCACCCATCCACTTCGAGACCAGGTCTGATGAAGACACGCTAAAGAAGG
FY454340       <-- TTCACCCATCCACTTCGAGACCAGGTCTGATGAAGACACGCTAAAGAAGG
FY446775       <-- ..................................................
FD555107       --> ..................................................

               901    -    951
UN04804        --> TAGAGTCAGCTTCAGTAGCAACAGCTTTGGCCAAGTAAGACTTTCCTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD558125       <-- TAGAGTCAGCTTCAGTAGCAA-AGCTTTGGCCAAGTAGGACTTTCCTGTT  Raphanus raphanistrum subsp. landra
FD558686       <-- TAGAGTCAGCTTCAGTAGCAA-AGCTTTGGCCAAGTAGGACTTTCCTGTT  Raphanus raphanistrum subsp. landra
FY435880       <-- TAGAGTCAGCTTCAGTAGCAACAGCTTTGGCCAAGTAAGACTTTCCTGTT  Raphanus sativus cv GSK3-1
FD559808       <-- TAGAGTCAGCTTCAGTAGCAACAGCTTTGGCCAAGTAGGACTTTCCTGTT  Raphanus raphanistrum subsp. landra
FY449001       <-- TAGAGTCAGCTTCAGTAGCAACAGCTTTGGCCAAGTAAGACTTTCCTGTT  Raphanus sativus cv GSK3-1
FY433909       <-- TAGAGTCAGCTTCAGTAGCAACAGCTTTGGCCAAGTAAGACTTTCCTGTT  Raphanus sativus cv GSK3-1
FD559399       <-- TAGAGTCAGCTTCAGTAGCAACAGCTTTGGCCAAGTAGGACTTTCCTGTT  Raphanus raphanistrum subsp. landra
FY452936       <-- TAGAGTCAGCTTCAGTAGCAACAGCTTTGGCCAAGTAAGACTTTCCTGTT  Raphanus sativus cv GSK3-1
FY454340       <-- TAGAGTCAGCTTCAGTAGCAACAGCTTTGGCCAAGTAAGACTTTCCTGTT  Raphanus sativus cv GSK3-1
FY446775       <-- ....GTCAGCTTCAGTAGCAACAGCTTTGGCCAAGTAAGACTTTCCTGTC  Raphanus sativus cv GSK3-1
FD555107       --> ..................................................  Raphanus raphanistrum subsp. landra

               951    -   1001
UN04804        --> CCAGGCGGCCCATACAAGAGAAAAGCTCGCCACGGCCTCCTCTTTCCGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD558125       <-- CCAGGCGGCCCATACAAGAGAAAAGCTCGCCATGGCCTCCTCTTTCC...
FD558686       <-- CCAGGCGGCCCATACAAGAGAAAAGCTCGCCATGGCCTCCTCTTTCC...
FY435880       <-- CCAGGCGGCCCATACAAGAGAAAAGCTCGCCACGGCCTCCTCTTTCCGGT
FD559808       <-- CCAGGCGGCCCATACAAGAGAAAAGCTCGCCACGGCCTCCTCTc......
FY449001       <-- CCAGGCGGCCCATACAAGAGAAAAGCTCGCCACGGCCTCCTCTTTCCGGT
FY433909       <-- CCAGGCGGCCCATACAAGAGAAAAGCTCGCCACGGCCTCCTCTTTCCGGT
FD559399       <-- CCAGGCGGCCCATACAAGAGAAAAGCTCGCCATGGCCTCCTCTTTCCGGT
FY452936       <-- CCAGGCGGCCCATACAAGAGAAAAGCTCGCCACGGCCTCCTCTTTCCGGT
FY454340       <-- CCAGGCGGCCCATACAAGAGAAAAGCTCGCCACGGCCTCCTCTTTCCGGT
FY446775       <-- CCAGGCGGCCCATACAAGAGAAAAGCTCGCCACGGCCTCCTCTTTCCGGT
FD555107       --> ..................................................

               1001   -   1051
UN04804        --> GAAGAACTGAGGAAACTTGACAGGCAAAATCACAGCTTCCTGCAAAGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD558125       <-- ..................................................
FD558686       <-- ..................................................
FY435880       <-- GAAGAACTGAGGAAACTTGACAGGCAAAATCACAGCTTCCTGCAAAGCTT
FD559808       <-- ..................................................
FY449001       <-- GAAGAACTGAGGAAACTTGACAGGCAAAATCACAGCTTCCTGCAAAGCTT
FY433909       <-- GAAGAACTGAGGAAACTTGACAGGCAAAATCACAGCTTCCTGCAAAGCTT
FD559399       <-- GAAGAACTGAGGAAACTTGACAGGCAAAATCACAGCTTCCTGCAAAGCTT
FY452936       <-- GAAGAACTGAGGAAACTTGACAGGCAAAATCACAGCTTCCTGCAAAGCTT
FY454340       <-- GAAGAACTGAGGAAACTTGACAGGCAAAATCACAGCTTCCTGCAAAGCTT
FY446775       <-- GAAGAACTGAGGAAACTTGACAGGCAAAATCACAGCTTCCTGCAAAGCTT
FD555107       --> ..................................................

               1051   -   1101
UN04804        --> GCTTAGCGCTTTCGAGCCCAGCAACATCTGTCCACTTAATGTTAGGCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD558125       <-- ..................................................
FD558686       <-- ..................................................
FY435880       <-- GCTTAGCGCTTTCGAGCCCAGCAACATCTGTCCACTTAATGTTAGGCTTC
FD559808       <-- ..................................................
FY449001       <-- GCTTAGCGCTTTCGAGCCCAGCAACATCTGTCCACTTAATGTTAGG-TTC
FY433909       <-- GCTTAGCGCTTTCGAGCCCAGCAACATCTGTCCACTTAATGTTAGGCTTC
FD559399       <-- GCTTAGCGCTCTCGAGCCCAGCAACATCAGTCCACTTAATGTTAGGCTTC
FY452936       <-- GCTTAGCGCTTTCGAGCCCAGCAACATCTGTCCACTTAATGTTAGGCTTC
FY454340       <-- GCTTAGCGCTTTCGAGCCCAGCAACATCTGTCCACTTAATGTTAGGCTTC
FY446775       <-- GCTTAGCGCTTTCGAGCCCAGCAACATCTGTCCACTTAATGTTAGGCTTC
FD555107       --> ..................................................

               1101   -   1151
UN04804        --> TCCCTCACAATCGCAGAGTTCAATCCAGCTCGGAGCTTAGACTGCTCCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD558125       <-- ..................................................
FD558686       <-- ..................................................
FY435880       <-- TCCCTCACAATCGCAGAGTTCAATCCA.......................
FD559808       <-- ..................................................
FY449001       <-- TCCCTCACAATC......................................
FY433909       <-- TCCCTCACAATCGCAGAGTTCAATCCAGC.....................
FD559399       <-- TCCCTCACAATCGCAGAGTTCAATCCAGCTCGGAGCTTAGACTGCTCCc.
FY452936       <-- TCCCTCACAATCGCAGAGTTCAATCCAGCTCGGAGCTTAGACTGCTCCGC
FY454340       <-- TCCCTCACAATCGCAGAGTTCAATCCAGCTCGGAGCTTAGACTGCTCCGC
FY446775       <-- TCCCTCACAATCGCAGAGTTCAATCCAGCTCGGAGCTTAGACTGCTCCGC
FD555107       --> ..................................................

               1151   -   1201
UN04804        --> GTCCTCTCCTCCATCCCCTCCTCCATCTTTCGCCTTGCTCTTCGGCCTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD558125       <-- ..................................................
FD558686       <-- ..................................................
FY435880       <-- ..................................................
FD559808       <-- ..................................................
FY449001       <-- ..................................................
FY433909       <-- ..................................................
FD559399       <-- ..................................................
FY452936       <-- GTCCTCTCCTCCATCCCCTCCTCCATCTTTCGCCTTGCTCTTCGGCCTCG
FY454340       <-- GTCCTCTCCTCCATCCCCTCCTCCATCTTTCGCCTTGCTCTTCGGCCTCG
FY446775       <-- GTCCTCTCCTCCATCCCCTCCTCCATCTTTCGCCTTGCTCTTCGGCCTCG
FD555107       --> ..................................................

               1201   -   1251
UN04804        --> TCGCCACCGCCGCCGCCGCGTCGCCGCCGTTAGATCCAGGACCCGATCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD558125       <-- ..................................................
FD558686       <-- ..................................................
FY435880       <-- ..................................................
FD559808       <-- ..................................................
FY449001       <-- ..................................................
FY433909       <-- ..................................................
FD559399       <-- ..................................................
FY452936       <-- TCGCCACCGCCGCCGCCGCGTCGCCGCCGTTAGATCCAGGACCCGATCCT
FY454340       <-- TCGCCACCGCCGCCGCCGCGTCGCCGCCGTTAGATCCAGGACCCGATCCT
FY446775       <-- TCGCCACCGCCGCCGCCGCGTCGCCGCCGTTAGATCCAGGACCCGATCCT
FD555107       --> ..................................................

               1251   -   1301
UN04804        --> CCTCCTTCATCGAGAACGGCACGGATCTCCTCCGCGCGGCGGAGGTACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD558125       <-- ..................................................
FD558686       <-- ..................................................
FY435880       <-- ..................................................
FD559808       <-- ..................................................
FY449001       <-- ..................................................
FY433909       <-- ..................................................
FD559399       <-- ..................................................
FY452936       <-- CCTCCTTCATCGAGAACGGCACGGATCTCCTCCGCGCGGCGGAGGTACTC
FY454340       <-- CCTCCTTCATCGAGAACGGCACGGATCTCCTCCGCGCGGCGGAGGTACTC
FY446775       <-- CCTCCTTCATCGAGAACGGCACGGATCTCCTCCGCGCGGCGGAGGTACTC
FD555107       --> ..................................................

               1301   -   1351
UN04804        --> GGTGAATTTCTGGGTGATGGCTTCTCTGATCTTGGGGTTCTTCTCGTACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD558125       <-- ..................................................
FD558686       <-- ..................................................
FY435880       <-- ..................................................
FD559808       <-- ..................................................
FY449001       <-- ..................................................
FY433909       <-- ..................................................
FD559399       <-- ..................................................
FY452936       <-- GGTGAATTTCTGGGTGATGGCTTCTCTGATCTTGGGGTTCTTCTCGTACT
FY454340       <-- GGTGAATTTCTGGGTGATGGCTTCTCTGATCTTGGGGTTCTTCTCGTACT
FY446775       <-- GGTGAATTTCTGGGTGATGGCTTCTCTGATCTTGGGGTTCTTCTCGTACT
FD555107       --> ..................................................

               1351   -   1401
UN04804        --> TGAGATGCGTTTTGAAGTACTCGAGCGCGTTCGTGTAGAGAGGGAAGGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD558125       <-- ..................................................
FD558686       <-- ..................................................
FY435880       <-- ..................................................
FD559808       <-- ..................................................
FY449001       <-- ..................................................
FY433909       <-- ..................................................
FD559399       <-- ..................................................
FY452936       <-- TGAGATGCGTTTTGAAGTACTCGAGCGCGTTCGTGTAGAGAGGGAAGGCC
FY454340       <-- TGAGATGCGTTTTGAAGTACTCGAGCGCGTTCGTGTAGAGAGGGAAGGCC
FY446775       <-- TGAGATGCGTTTTGAAGTACTCGAGCGCGTTCGTGTAGAGAGGGAAGGCC
FD555107       --> ..................................................

               1401   -   1451
UN04804        --> TTGTTGTAGTTCCCGGCATTGTCTTCTTGAACCGCTTGCTTCACGTACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD558125       <-- ..................................................
FD558686       <-- ..................................................
FY435880       <-- ..................................................
FD559808       <-- ..................................................
FY449001       <-- ..................................................
FY433909       <-- ..................................................
FD559399       <-- ..................................................
FY452936       <-- TTGTTGTAGTTCCCGGCATTGTCTTCTTGAACCGCTTGCTTCACGTACTC
FY454340       <-- TTGTTGTAGTTCCCGGCATTGTCTTCTTGAACCGCTTGCTTCACGTACTC
FY446775       <-- TTGTTGTAGTTCCCGGCATTGTCTTCTTGAACCGCTTGCTTCACGTACTC
FD555107       --> ..................................................

               1451   -   1501
UN04804        --> GATCGCCCGTTCCTTGAAATTGCTGTACATAGCTTAGGGTTCGAATCGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD558125       <-- ..................................................
FD558686       <-- ..................................................
FY435880       <-- ..................................................
FD559808       <-- ..................................................
FY449001       <-- ..................................................
FY433909       <-- ..................................................
FD559399       <-- ..................................................
FY452936       <-- GATCGCCCGTTCCTTGAAATTGCTGTACATAGCTTAGGGTTCGAATCGAA
FY454340       <-- GATCGCCCGTTCCTTGAAATTGCTGTACATAGCTTAGGGTTCGAATCGAA
FY446775       <-- GATCGCCCGTTCCTTGAAATTGCTGTACATAGCTTAGGGTTCGAATCGAA
FD555107       --> ..................................................

               1501   -   1551
UN04804        --> GGTAGAGTCTCTCTTGTGTACTTGGAGGATCGGTTTGGTTTGATCTAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD558125       <-- ..................................................
FD558686       <-- ..................................................
FY435880       <-- ..................................................
FD559808       <-- ..................................................
FY449001       <-- ..................................................
FY433909       <-- ..................................................
FD559399       <-- ..................................................
FY452936       <-- GGTAGAGTCTCTCTTGTGTACTTGGAGGATCGGTTTGGTTTGATCTAGGA
FY454340       <-- GGTAGAGTCTCTCTTGTGTACTTGGAGGATCGGTTTGGTTTGATCTAGGA
FY446775       <-- GGTAGAGTCTCTCTTGTGTACTTGGAGGATCGGTTTGGTTTGATCTAGGA
FD555107       --> ..................................................

               1551   -   1601
UN04804        --> TCGTAGATGATAAAACTCGTGGGGATGAATTTGACCAGAAGATCGGAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD558125       <-- ..................................................
FD558686       <-- ..................................................
FY435880       <-- ..................................................
FD559808       <-- ..................................................
FY449001       <-- ..................................................
FY433909       <-- ..................................................
FD559399       <-- ..................................................
FY452936       <-- TCGTAGATGATAAAACTCGTGGGGATGAATT-GACCAGAAGATCGGAGAG
FY454340       <-- TCGTAGATGATAAAACTCGTGGGGATGAATTTGACCAGAAGATC......
FY446775       <-- TCGTAGATGATAAAACTCGTGGGGATGAATTTGACCAGAAGATCGGAGAG
FD555107       --> ..................................................

               1601   -   1651
UN04804        --> AGAGGATGGAA
                   ~~~~~~~~~~~
FD558125       <-- ...........
FD558686       <-- ...........
FY435880       <-- ...........
FD559808       <-- ...........
FY449001       <-- ...........
FY433909       <-- ...........
FD559399       <-- ...........
FY452936       <-- AGAGGATGGAA
FY454340       <-- ...........
FY446775       <-- AGAGGA.....
FD555107       --> ...........