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Alignment for radish unigene UN04910

               1      -     51
UN04910        --> GGGCTCAGACCATTCATGGCTACCATTCTCAGCTTTGCTCCTCCTTCTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD553329       <-- ..................................................
EY896342       <-- ..................................................
FD530544       <-- ..................................................
FD567666       <-- ..................................................
FD545804       <-- ..................................................
EY900911       --> GGGCTCAGACCATTCATGGCTACCATTCTCAGCTTTGCTCCTCCTTCTGT
FD557157       --> GGGCTCAGACCATTCATGGCTACCATTCTCAGCTTTGCTCCTCCTTCTGT
FD534682       --> ....ggAGACCATTCATGGCTACCATTCTCAGCTTTGCTCCTCCTTCTGT
FD549772       --> ....ggAGACCATTCATGGCTACCATTCTCAGCTTTGTTCCTCCTTCTGT
EX772825       --> ..................................................
FD564101       --> ..................................................

               51     -    101
UN04910        --> TCCATCTACAACATACCCAAAAGCCTCTCTAAGAATCCCTCTTTTTACGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD553329       <-- ..................................................
EY896342       <-- ..................................................
FD530544       <-- ..................................................
FD567666       <-- ..................................................
FD545804       <-- ..................................................
EY900911       --> TCCATCTACAACATACCCAAAAGCCTCTCTAAGAATCCCTCTTTTTACGT
FD557157       --> TCCATCTACAACATACCCAAAACCCTCTCTAAGAATCCCTCTTTTTACGT
FD534682       --> TCCATCTACAACATACCCAAAAGCCTCTCTAAGAACCCCTCTTTTTACGT
FD549772       --> TCCATCTACAACATACCCAAAAGCCTCTCTAAGAATCCCTCTTTTTACGT
EX772825       --> ....TCTACAACATACCCAAAACCCTCTCTAAGAATCCCTCTTTTTACGT
FD564101       --> ..................................................

               101    -    151
UN04910        --> CTCTGCCACTCTCATCATCTTCTTCTTCTGGCCTTACTTCTTCCTTCCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD553329       <-- ..................................................
EY896342       <-- ..................................................
FD530544       <-- ..................................................
FD567666       <-- ..................................................
FD545804       <-- ..................................................
EY900911       --> CTCTGCCACTCTCATCATCTTCTTCTTCTGGCCTTACTTCTTCCTTCCTA
FD557157       --> CTCTGCCACTCTCATCATCTTCTTCTTCTGGCCTTACTTCTTCCTTCCTA
FD534682       --> CTCTGCCACTCTCATCATCCTCTTCTTCTGGCCTTACTTCTTCCTTCCTA
FD549772       --> CTCTGCCACTCTCATCATCTTCTTCTTCTGGCCTTACTTCTTCCTTCCTA
EX772825       --> CTCTGCCACTCTCATCATCTTCTTCTTCTGGCCTTACTTCTTCCTTCCTA
FD564101       --> ..................................................

               151    -    201
UN04910        --> GTTAGAAATGAATCATCTTTGTCTCCATCATCCTCTCCAATTCAAGCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD553329       <-- ..................................................
EY896342       <-- ..................................................
FD530544       <-- ..................................................
FD567666       <-- ..................................................
FD545804       <-- ..................................................
EY900911       --> GTTAGAAATGAATCATCTTTGTCTCCATCATCCTCTCCAATTCAAGCTCT
FD557157       --> GTTAGAAATGAATCATCTTTATCTCCATCATCCTCTCCAATTCAAGCTCT
FD534682       --> GTTAGAAATGAATCATCTTTGTCTCCATCATCCTCTCCAATTCAAGCTCT
FD549772       --> GTTAGAAATGAATCATCTTTGTCCCCATCATCCTCTCCAATTCAAGCTCT
EX772825       --> GTTAGAAATGAATCATCTTTATCTCCATCATCCTCTCCAATTCAAGCTCT
FD564101       --> ..................................................

               201    -    251
UN04910        --> CGCAGAAGAAGCCGTCGATTCTTCTACTCTATCCTCTTCATCAAAGCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD553329       <-- ..................................................
EY896342       <-- ..................................................
FD530544       <-- ..................................................
FD567666       <-- ..................................................
FD545804       <-- ..................................................
EY900911       --> CGCAGAAGAAGCCGTCGATTCTTCTACTCTATCCTCTTCATCAAAGCTTG
FD557157       --> TGCAGAAGAAGCCGTCGATTCTTCTACTCTATCCTCTTCATCAAAGCTTG
FD534682       --> CGCAGAAGAAGCCGTCGATTCTTCTACTCTATCCTCTTCATCAAAGCTTG
FD549772       --> CGCAGAAGAAGCCGTCGATTCTTCTACTCTATCCTCTTCATCAAAGCTTG
EX772825       --> TGCAGAAGAAGCCGTCGATTCTTCTACTCTATCCTCTTCATCAAAGCTTG
FD564101       --> ..................................................

               251    -    301
UN04910        --> TCCTTGTCGTTGGTGGCACTGGTGGTGTCGGGCAACTAGTGGTAGCTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD553329       <-- ..................................................
EY896342       <-- ..................................................
FD530544       <-- ..................................................
FD567666       <-- ..................................................
FD545804       <-- ..................................................
EY900911       --> TCCTTGTCGTTGGTGGCACTGGTGGTGTCGGGCAACTAGTGGTAGCTTCA
FD557157       --> TCCTTGTCGTTGGTGGCACTGGTGGTGTCGGGCAACTAGTGGTAGCTTCA
FD534682       --> TCCTTGTCGTTGGTGGCACTGGTGGTGTCGGGCAACTAGTGGTAGCTTCA
FD549772       --> TCCTTGTCGTTGGTGGCACTGGTGGTGTCGGGCAACTAGTGGTAGCTTCA
EX772825       --> TCCTTGTCGTTGGTGGCCCTGGTGGTGTCGGGCAACTAGTGGTAGCTTCA
FD564101       --> ..................................................

               301    -    351
UN04910        --> TTGCTCAAGAGGAACATTAAGTCAAGGCTATTGCTACGTGATCTTGAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD553329       <-- ...............................TGCTACGTGATCTTGAGAA
EY896342       <-- ..................................................
FD530544       <-- ..................................................
FD567666       <-- ..................................................
FD545804       <-- ..................................................
EY900911       --> TTGCTCAAGAGGAACATTAAGTCAAGGCTATTGCTACGTGATCTTGAGAA
FD557157       --> TTGCTCAAGAGGAACATTAAGTCAAGGCTATTGCTACGTGATCTTGAGAA
FD534682       --> TTGCTCAAGAGGAACATTAAGTCAAGGCTATTGCTACGTGATCTTGAGAA
FD549772       --> TTGCTCAAGAGGAACATTAAGTCAAGGCTATTGCTACGTGATCTTGAGAA
EX772825       --> TTGCTCAAGAGGAACATTAAGTCAAGGCTATTGCTACGTGATCTTGAGAA
FD564101       --> ..................................................

               351    -    401
UN04910        --> AGCTACCAAGTTGTTCGGTAAACAAGATGAAGATTCATTACAGGTAGTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD553329       <-- AGCTACCAAGTTGTTCGGTAAACAAGATGAAGATTCATTACAGGTAGTCA  Raphanus raphanistrum subsp. landra
EY896342       <-- .............................AAGATTCATTACAGGTAGTTA  Raphanus raphanistrum subsp. maritimus
FD530544       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD567666       <-- ..................................................  Raphanus sativus var. oleiformis
FD545804       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY900911       --> AGCTACCAAGTTGTTCGGTAAACAAGATGAAGATTCATTACAGGTAGTTA  Raphanus raphanistrum subsp. maritimus
FD557157       --> AGCTACCAAGTTGTTCGGTAAACAAGATGAAGATTCATTACAGGTAGTCA  Raphanus raphanistrum subsp. landra
FD534682       --> AGCTACCGAGTTGTTCGGTAAACAAGATGAAGATTCATTACAGGTAGTTA  Raphanus raphanistrum subsp. maritimus
FD549772       --> AGCTACCAAGTTGTTCGGTAAACAAGATGAAGATTCATTACAGGTAGTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX772825       --> AGCTACCAAGTTGTTCGGTAAACAAGATGAAGATTCATTACAGGTAGTCA  Raphanus raphanistrum subsp. landra
FD564101       --> ..................................................  Raphanus sativus var. oleiformis

               401    -    451
UN04910        --> AAGGTGATACTAGGAATGCAGAGGATCTTGATCCATCCATGTTTGAGGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD553329       <-- AAGGGGATACTAGGAATGCAGAGGATCTTGATCCATCCATGTTTGAGGGT  Raphanus raphanistrum subsp. landra
EY896342       <-- AAGGTGATACTAGGAATGCAGAGGATCTTGATCCATCCATGTTTGAGGGT  Raphanus raphanistrum subsp. maritimus
FD530544       <-- .................GCAGAGGATCTTGATCCATCCATGTTTGAGGGT  Raphanus raphanistrum subsp. maritimus
FD567666       <-- .............................................AGGGT  Raphanus sativus var. oleiformis
FD545804       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY900911       --> AAGGTGATACTAGGAATGCAGAGGATCTTGATCCATCCATGTTTGAGGGT  Raphanus raphanistrum subsp. maritimus
FD557157       --> AAGGGGATACTAGGAATGCAGAGGATCTTGATCCATCCATGTTTGAGGGT  Raphanus raphanistrum subsp. landra
FD534682       --> AAGGTGATACTAGGAATGCAGAGGATCTTGATCCATCCATGTTTGAGGGT  Raphanus raphanistrum subsp. maritimus
FD549772       --> AAGGTGATACTAGGAATGCAGAGGATCTTGATCCATCCATGTTTGAGGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX772825       --> AAGGGGATACTAGGAATGCAGAGGATCTTGATCCATCCATGTTTGAGGGT  Raphanus raphanistrum subsp. landra
FD564101       --> ..........gAGGAATGCAGAGGATCTTGATCCATCCATGTTTGAGGGT  Raphanus sativus var. oleiformis

               451    -    501
UN04910        --> GTGACACATGTGATTTGCTGCACGGGAACTACAGCTTTTCCTTCTCAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD553329       <-- GTGACACATGTGATTTGCTGCACGGGAACTACAGCTTTTCCTTCACAGAG  Raphanus raphanistrum subsp. landra
EY896342       <-- GTGACACATGTGATTTGCTGCACGGGAACTACAGCTTTCCCTTCTCAGAG  Raphanus raphanistrum subsp. maritimus
FD530544       <-- GTGACACATGTGATTTGCTGCACGGGAACTACAGCTTTCCCTTCTCAGAG  Raphanus raphanistrum subsp. maritimus
FD567666       <-- GTGACACATGTGATTTGCTGCACGGGAACTACAGCTTTTCCTTCCCAGAG  Raphanus sativus var. oleiformis
FD545804       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY900911       --> GTGACACATGTGATTTGCTGCACGGGAACTACAGCTTTCCCTTCTCAGAG  Raphanus raphanistrum subsp. maritimus
FD557157       --> GTGACACATGTGATTTGCTGCACGGGAACTACAGCTTTTCCTTCACAGAG  Raphanus raphanistrum subsp. landra
FD534682       --> GTGACACATGTGATTTGCTGCACGGGAACTACAGCTTTCCCTTCTCAGAG  Raphanus raphanistrum subsp. maritimus
FD549772       --> GTGACACATGTGATTTGCTGCACGGGAACTACAGCTTTCCCTTCTCAGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX772825       --> GTGACACACGTGATTTGCTGCACGGGAACTACAGCTTTTCCTTCACAGAG  Raphanus raphanistrum subsp. landra
FD564101       --> GTGACACATGTGATTTGCTGCACGGGAACTACAGCTTTTCCTTCCCAGAG  Raphanus sativus var. oleiformis

               501    -    551
UN04910        --> GTGGAGTGGAGAGAACACACCTGATAAAGTAGATTGGGAAGGTGTGAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD553329       <-- GTGGAGTGGAGAGAACACACCTGATAAAGTAGATTGGGAAGGTGTGAGGA
EY896342       <-- GTGTAGTGGAGAGAACACACCTGATAAAGTAGATTGGGAAGGTGTGAGGA
FD530544       <-- GTGGAGTGGAGAGAACACACCTGATAAAGTAGATTGGGAAGGTGTGAGGA
FD567666       <-- GTGGAGTGGAGAGAACACACCTGATAAAGTAGATTGGGAAGGTGTGAGGA
FD545804       <-- ..................................................
EY900911       --> GTGTAGTGGAGAGAACACACCTGATAAAGTAGATTGGGAAGGTGTGAGGA
FD557157       --> GTGGAGTGGAGAGAACACACCTGATAAAGTAGATTGGGAAAGTGTGAGGA
FD534682       --> GTGGAGTGGAGAGAACACACCTGATAAAGTAGATTGGGAAGGTGTGAGGA
FD549772       --> GTGGAGTGGAGAGAACACACCTGATAAAGTAGA.................
EX772825       --> GTGGAGTGGAGAGAACACACCTGATAAAGTAGATTGGGAAGGTGTGAGGA
FD564101       --> GTGGAGTGGAGAGAACACACCTGATAAAGTAGATTGGGAAGGTGTGAGGA

               551    -    601
UN04910        --> ATCTCATTTCAGCACTGCCCTCATCGGTGGAGAGAGTTGTTCTGGTTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD553329       <-- ATCTCATTTCAGCACTGCCCTCATCGGTGGAGAGAGTTGTTCTGGTTTCA
EY896342       <-- ATCTCATTTCAGCACTGCCCTCATCGGTGGAGAGAGTTGTTCTGGTTTCA
FD530544       <-- ATCTCATTTCAGCACTGCCCTCATCGGTGGAGAGAGTTGTTCTGGTTTCA
FD567666       <-- ATCTCATTTCAGCAATGCCCTCATCGGTGGAGAGAGTTGTTCTGGTTTCA
FD545804       <-- ..................................................
EY900911       --> ATCTCATTTCAGCACTGCCCTCATCGGTGGAGAGAGTTGTTCTGGTTTCA
FD557157       --> ATCTCATTTCAGCACTGCCCTCATCGGTGGAGAGAGTTGTTCTGGTTTCA
FD534682       --> ATCTCATTTCAGCACTGCCCTCATCGGTGGAGAGAGTTGTTCTGGTTTCA
FD549772       --> ..................................................
EX772825       --> ATCTCATTTCAGCACTGCCCTCATCGGTGGAGAGAGTTGTTCTGGTTTCA
FD564101       --> ATCTCATTTCAGCAATGCCCTCATCGGTGGAGAGAGTTGTTCTGGTTTCA

               601    -    651
UN04910        --> TCAGTAGGTGTCACCAAGCCTGATGAGCTTCCTTGGAGCATCATGAACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD553329       <-- TCAGTAGGTGTCACCAAGCCTGATGAGCTCCCTTGGAGCATCATGAACTT
EY896342       <-- TCAGTAGGTGTCACCAAGCCTGATGAGCTTCCTTGTAGCATCATGAACTT
FD530544       <-- TCAGTAGGTGTCACCAAGCCTGATGAGCTTCCTTGGAGCATCATGGACTT
FD567666       <-- TCAGTAGGTGTCACCAAGCCTGATGAGCTTCCTTGGAGCATCATGAACTT
FD545804       <-- ..................................................
EY900911       --> TCAGTAGGTGTCACCAAGCCTGATGAGCTTCCTTGTAGCATCATGAACTT
FD557157       --> TCAGTAG-TGTCACCAAGCCTGATGAGCTTCCTTGGAGCATCATGAACTT
FD534682       --> TCAGTAGGTGTCACCAAGCCTGATGAGCTTCCTTGGAGCATCATGGACTT
FD549772       --> ..................................................
EX772825       --> TCAGTAGGTGTCACCAAGCCTGATGAGCTTCCTTGGAGCATCATGAACTT
FD564101       --> TCAGTAGGTGTCACCAAGCCTGATGAGCTTCCTTGGAGCATCATGAACTT

               651    -    701
UN04910        --> ATTTGGGGTTCTTAAGTACAAGAAGATGGGGGAAGATTTTCTTAGGGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD553329       <-- ATTTGGGGTTCTTAAGTACAAGAAGATGGGGGAAGATTTTCTTAGGGAAT
EY896342       <-- ATTTGGGGTTCTTAAGTACAAGAAGATGGGGGAAGATTTTCTTAGGGAAT
FD530544       <-- ATTTGGGGTTCTTAAGTACAAGAAGATGGGGGAAGATTTTCTTAGGGAAT
FD567666       <-- ATTTGGGGTTCTTAAGTACAAGAAGATGGGGGAAGATTTTCTTCGGGAAT
FD545804       <-- ..................................................
EY900911       --> ATTTGGGGTTCTTAAGTACAAGAAGATGGGGGAAGATTTTCTTAGG-AAT
FD557157       --> ATTTGGGGTTCTTA-GTACA-G-AGATGGGGGA-GATTTc..........
FD534682       --> ATTTGGGGTTCTTAAGTACAAGAAGATGGGGGAAGATTTTCTTAGGGA-T
FD549772       --> ..................................................
EX772825       --> ATTTGGGGTTCTTAAGTACAAGAAGATGGGGGAAGATTTTCTTAGGGA-T
FD564101       --> ATTTGGGGTTCTTAAGTACAAGAAGATGGGGGAAGATTTTCTTCGGGAAT

               701    -    751
UN04910        --> CTGGTCTTCCATTCACCATTATCAGACCGGGTAGATTGACTGATGGACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD553329       <-- CTGGTCTTCCATTCACCATTATCAGACCGGGTAGATTGACTGATGGACCA
EY896342       <-- CTGGTCTTCCATTCACCATTATCAGACCGGGTAGATTGACTGATGGACCA
FD530544       <-- CTGGTCTTCCATTCACCATTATCAGACCGGGTAGATTGACTGATGGACCA
FD567666       <-- CTGGTCTTCCATTCACCATTATCAGACCGGGTAGATTGACTGATGGACCA
FD545804       <-- ..................................................
EY900911       --> CTGGTCGTCCA.......................................
FD557157       --> ..................................................
FD534682       --> CTGGTCTTCCA.......................................
FD549772       --> ..................................................
EX772825       --> CTGGTCTTCCATTCACCATTATCAGACCGGGTAGACTGACTGATGGAC-A
FD564101       --> CTGGTCTTCCATTCACCATTATCAGACCGGGTAGATTGACTGATGGACCA

               751    -    801
UN04910        --> TACACATCCTATGATCTCAATACTTTGCTCAAAGCTACAGCCGGTGAACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD553329       <-- TACACATCCTATGATCTCAATACTTTGCTCAAAGCTACAGCCGGTGAACG
EY896342       <-- TACACATCCTATGATCTCAATACTTTGCTCAAAGCTACAGCCGGTGAACG
FD530544       <-- TACACATCCTATGATCTCAATACTTTGCCCAAAGCTACAGCCGGTGAACG
FD567666       <-- TACACATCCTATGATCTCAATACTTTGCTCAAAGCTACAGCCGGTGAACG
FD545804       <-- ..................................................
EY900911       --> ..................................................
FD557157       --> ..................................................
FD534682       --> ..................................................
FD549772       --> ..................................................
EX772825       --> TACACATCCTATGATCTCA-TACTTTGCTCAAAGCTACA...........
FD564101       --> TACACATCCTATGATCTCAATACTTTGCTCAAAGCTACAGCCGGTGAACG

               801    -    851
UN04910        --> GCGTGCTGTTGTTATTGGTCAAGGAGACAAGCTTGTTGGAGAGGTAAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD553329       <-- GCGTGCTGTTGTTATTGGTCAAGGAGACAAGCTTGTTGGAGAGGTAAGCA
EY896342       <-- GCGTGCTGTTGTTATTGGTCAAGGAGACAAGCTTGTTGGAGAGGTAAGCA
FD530544       <-- GCGTGCTGTTGTTATTGGTCAAGGAGACAAGCTTGTTGGAGAGGTAAGCA
FD567666       <-- GCGTGCTGTTGTTATTGGTCAAGGTGATAAACTTGTTGGAGAGGTAAGCA
FD545804       <-- ..................................................
EY900911       --> ..................................................
FD557157       --> ..................................................
FD534682       --> ..................................................
FD549772       --> ..................................................
EX772825       --> ..................................................
FD564101       --> GCGTGCTGTTGTTATTGGTCAAGGTGATAAACTTGTTGGAGAGGTAAGCA

               851    -    901
UN04910        --> GACTTGTGGTGGCTGAAGCTTGCATACAGGCACTTGATATTGAGTTCACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD553329       <-- GACTTGTGGTGGCTGAAGCTTGCATACAGGCACTTGATATTGAGTTCACA
EY896342       <-- GACTTGTGGTGGCTGAAGCTTGCATACAGGCACTTGATATTGAGTTCACA
FD530544       <-- GACTTGTGGTGGCTGAAGCTTGCATACAGGCACTTGATATTGAGTTCACA
FD567666       <-- GACTTGTGGTGGCTGAAGCTTGCATACAGGCACTTGATATTGAGTTCACA
FD545804       <-- ..................................................
EY900911       --> ..................................................
FD557157       --> ..................................................
FD534682       --> ..................................................
FD549772       --> ..................................................
EX772825       --> ..................................................
FD564101       --> GACTTGTGGTGGCTGAAGCTTGCATACAGGCACTTGATATTGAGTTCACA

               901    -    951
UN04910        --> CAAGGGAAAGCTTATGAGATCAATTCAGTCAAGGGAGATGGTCCAGGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD553329       <-- CAAGTGAAAGCTTATGAGATCAATTCAGTCAAGGGAGATGGTCCAGGAAG
EY896342       <-- CAAGGGAAAGCTTATGAGATCAATTCAGTCAAGGGAGATGGTCCAGGAAG
FD530544       <-- CAAGGGAAAGCTTATGAGATCAATTCAGTCAAGGGAGATGGTCCAGGAAG
FD567666       <-- CAAGGGAAAGCTTATGAGATCAATTCAGTCAAGGGAGATGGTCCAGGAAG
FD545804       <-- ..................................................
EY900911       --> ..................................................
FD557157       --> ..................................................
FD534682       --> ..................................................
FD549772       --> ..................................................
EX772825       --> ..................................................
FD564101       --> CAAGGGAAAGCTTATGAGATCAATTCAGTCAAGGGAGATGGTCCAGGAAG

               951    -   1001
UN04910        --> TGATCCACAGAAATGGCGAGAGTTGTTTAAAGTTGCAGAATCCAAATGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD553329       <-- TGATCCACAGAAATGGCGAGAGTTGTTTAAAGTTGCAGAATCCAAATGAT
EY896342       <-- TGATCCACAGAAATGGCGAGAGTTGTTTAAAGTTGCAGAATCCAAATGAT
FD530544       <-- TGATCCACAGAAATGGCGAGAGTTGTTTAAAGTTGCAGAATCCAAATGAT
FD567666       <-- TGATCCACAGAAATGGCGAGAGTTGTTTAAAGTTGCAGAATCCAAATGAT
FD545804       <-- ..........AAATGGCGAGAGTTGTTTAAAGTTGCAGAATCCAAATGAT
EY900911       --> ..................................................
FD557157       --> ..................................................
FD534682       --> ..................................................
FD549772       --> ..................................................
EX772825       --> ..................................................
FD564101       --> TGATCCACAGAAATGGCGAGAGTTGTTTAAAGTTGCAGAATCCAAATGAT

               1001   -   1051
UN04910        --> AGGAGATGCTACTGAGAAATGTGTACAGATATGGTGGTCTACTTGTGTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD553329       <-- AGGAGATGCTACTGAGAAATGTGTACAGATATGGTGGTCTACTTGTGTAT
EY896342       <-- AGGAGATGCTACTGAGAAATGTGTACAGATATGGTGGTCTACTTGTGTAT
FD530544       <-- AGGAGATGCTACTGAGAAATGTGTACAGATATGGTGGTCTACTTGTGTAT
FD567666       <-- AGGAGATGCTACTGAGAAATGTGTACAGATATGGTGGTCTACTTGTGTAT
FD545804       <-- AGGAGATGCTACTGAGAAATGTGTACAGATATGGTGGTCTACTTGTGTAT
EY900911       --> ..................................................
FD557157       --> ..................................................
FD534682       --> ..................................................
FD549772       --> ..................................................
EX772825       --> ..................................................
FD564101       --> AGGAGATGCTACTGAGAAATGTGTACAGATATGGTGGTCTACTTGTGTAT

               1051   -   1101
UN04910        --> ACACATATACTTGTGTAATAACTTTCATCTATACATAAACATGATCAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD553329       <-- ACACATATACTTGTGTAATAACTTTCATCTATACATAAACATGATCAAAT
EY896342       <-- ACACATATACTTGTGTAATAACTTTCATCTATACATAAACATGATC....
FD530544       <-- ACACATATACTTGTGTAATAACTTTCATCTATACATAAACATGATCAAAT
FD567666       <-- ACACATATACTTGTGTAATAACTTTCATCTATACATAAACATGATC....
FD545804       <-- ACACATATACTTGTGTAATAACTTTCATCTATACATAAACATGATCAAAT
EY900911       --> ..................................................
FD557157       --> ..................................................
FD534682       --> ..................................................
FD549772       --> ..................................................
EX772825       --> ..................................................
FD564101       --> ACACATATACTTGTGTAATAACTTTCATCTATACATAAACATGATCAAAa

               1101   -   1151
UN04910        --> TCACATGGCAACACAAGTAAACTGAGAGATAAGAGAGGGCAAAGAGAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD553329       <-- TCACATGGC.........................................
EY896342       <-- ..................................................
FD530544       <-- TCACATGGCAACACAAGTAAACTGAGAGATAAGAGAGGGCAAAGAGAGAA
FD567666       <-- ..................................................
FD545804       <-- TCACATGGCAACACAAGTAAACTGAGAGATAAGAGAGGGCAAAGA.....
EY900911       --> ..................................................
FD557157       --> ..................................................
FD534682       --> ..................................................
FD549772       --> ..................................................
EX772825       --> ..................................................
FD564101       --> aaaa..............................................

               1151   -   1201
UN04910        --> CAGAGAAACTGTCCA
                   ~~~~~~~~~~~~~~~
FD553329       <-- ...............
EY896342       <-- ...............
FD530544       <-- CAGAGAAACTGTCCA
FD567666       <-- ...............
FD545804       <-- ...............
EY900911       --> ...............
FD557157       --> ...............
FD534682       --> ...............
FD549772       --> ...............
EX772825       --> ...............
FD564101       --> ...............