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Alignment for radish unigene UN05082

               1      -     51
UN05082        --> GGAGGGTTTTGATTCTTCATTTTGAGAGCTACCTTCTTCGAGCCGCGGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530331       <-- ..................................................
FD985005       <-- ..................................................
EY895286       <-- ..................................................
EY893718       <-- ..................................................
EY894360       <-- ..................................................
FD529565       <-- ..................................................
EY898247       --> GGAGGGTTTTGATTCTTCATTTTGAGAGCTACCTTCTTCGAGCCGCGGCT
EY897381       --> ........ggGATTCTTCATTTTGAGAGCTACCTTCTTCGAGCCGCGGCT
EY937467       --> ................ggATTTTGAGAGCTACCTTCTTCGAGCCGCGGCT
FD962959       --> ................ggATTTTGAGAGCTACCTTCTTCGAGCCGCGGCT
FD569065       --> ..................tTTTTGAGAGCTACCTTCTTCGAGCCGCGGCT
FD563708       --> .....................ggGAGAGCTACCTTCTTCGAGCCGCGGCT
EV525642       --> .................................ggaTTCGAGCCGCGGCT
FD989192       --> ...........................................gggGGCT
FD533356       --> ..................................................

               51     -    101
UN05082        --> ACAAAGTTACCTTCTTCTCTTCTAGAGCCATGGCCGCCACCGTAGAAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530331       <-- ..............TTCTCTTCTAGAGCCATGGCCGCCGCCGTAGAAATC
FD985005       <-- ............................................GAAATC
EY895286       <-- ..................................................
EY893718       <-- ..................................................
EY894360       <-- ..................................................
FD529565       <-- ..................................................
EY898247       --> ACAAAGTTACCTTCTTCTCTTCTAGAGCCATGGCCGCCACCGTAGAAATC
EY897381       --> ACAAAGTTACCTTCTTCTCTTCTAGAGCCATGGCCGCCACCGTAGAAATC
EY937467       --> ACAAAGTTACCTTCTTCTCTTCTAGAGCCATGGCCGCCACCGTAGAAATC
FD962959       --> ACAAAGTTACCTTCTTCTCTTCTAGAGCCATGGCCGCCACCGTAGAAATC
FD569065       --> ACAAAGTTACCTTCTTCTCTTCTAGAGCCATGGCCGCCACCGTAGAAATC
FD563708       --> ACAAAGTTACCTTCTTCTCTTCTAGAGCAATGGCCGCCACCGTAGAAATC
EV525642       --> ACAAAGTTACCTTCTTCTCTTCTAGAGCCATGGCCGCCGCCGTAGAAATC
FD989192       --> ACAAAGTTACCTTCTTCTCTTCTAGAGCCATGGCCGCCACCGTAGAAATC
FD533356       --> ..................................................

               101    -    151
UN05082        --> GACGCTGAGATTCAGCAGCAGCTTACCAATGAGGTCAAGCTCTTCAACCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530331       <-- GACGCTGAGATTCAGCAGCAGCTTACCAACGAGGTCAAGCTCTTCAACCG  Raphanus raphanistrum subsp. maritimus
FD985005       <-- GACGCTGAGATTCAGCAGCAGCTTACCAATGAGGTCAAGCTCTTCAACCG  Raphanus raphanistrum subsp. landra
EY895286       <-- ...................................CAAGCTCTTCAACCG  Raphanus raphanistrum subsp. maritimus
EY893718       <-- ...............................................CCG  Raphanus raphanistrum subsp. maritimus
EY894360       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD529565       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY898247       --> GACGCTGAGATTCAGCAGCAGCTTACCAATGAGGTCAAGCTCTTCAACCG  Raphanus raphanistrum subsp. maritimus
EY897381       --> GACGCTGAGATTCAGCAGCAGCTTACCAATGAGGTCAAGCTCTTCAACCG  Raphanus raphanistrum subsp. maritimus
EY937467       --> GACGCTGAGATTCAGCAGCAGCTTACCAACGAGGTCAAGCTCTTCAACCG  Raphanus sativus cv Early Scarlet Globe
FD962959       --> GACGCTGAGATTCAGCAGCAGCTTACCAATGAGGTCAAGCTCTTCAACCG  Raphanus raphanistrum subsp. maritimus
FD569065       --> GACGCTGAGATTCAGCAGCAGCTTACCAACGAGGTCAAGCTCTTCAACCG  Raphanus sativus cv Early Scarlet Globe
FD563708       --> GACGCTGAGATTCAGCAGCAGCTTACCAACGAGGTCAAGCTCTTCAACCG  Raphanus sativus var. oleiformis
EV525642       --> GACGCTGAGATTCAGCAGCAGCTTACCAACGAGGTCAAGCTCTTCAACCG  Raphanus raphanistrum subsp. maritimus
FD989192       --> GACGCTGAGATTCAGCAGCAGCTTACCAATGAGGTCAAGCTCTTCAACCG  Raphanus raphanistrum subsp. landra
FD533356       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               151    -    201
UN05082        --> TTGGAGCTTTGACGACGTCTCGGTCACAGACATTAGTCTTGTTGACTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530331       <-- TTGGAGCTTTGACGACGTCTCGGTCACGGACATTAGTCTTGTTGACTACA
FD985005       <-- TTGGAGCTTTGACGACGTCTCGGTCACAGACATTAGTCTTGTTGACTACA
EY895286       <-- TTGGAGCTTTGACGACGTCTCGGTCACGGACATTAGTCTTGTTGACTACA
EY893718       <-- TTGGAGCTTTGACGACGTCTCGGTCACAGACATTAGTCTTGTTGACTACA
EY894360       <-- ..................................................
FD529565       <-- ..................................................
EY898247       --> TTGGAGCTTTGACGACGTCTCGGTCACAGACATTAGTCTTGTTGACTACA
EY897381       --> TTGGAGCTTTGACGACGTCTCGGTCACAGACATTAGTCTTGTTGACTACA
EY937467       --> TTGGAG-TTTGACGACGTCTCGGTCACAGACATTAGTCTTGTTGACTACA
FD962959       --> TTGGAGCTTTGACGACGTCTCGGTCACAGACATTAGTCTTGTTGACTACA
FD569065       --> TTGGAGCTTTGACGACGTCTCGGTCACAGACATTAGTCTTGTTGACTACA
FD563708       --> TTGGAGCTTTGACGACGTCTCGGTCACAGACATTAGTCTTGTTGACTACA
EV525642       --> TTGGAGCTTTGACGACGTCTCGGTCACGGACATTAGTCTTGTTGACTACA
FD989192       --> TTGGAGCTTTGACGACGTCTCGGTCACAGACATTAGTCTTGTTGACTACA
FD533356       --> ..................................................

               201    -    251
UN05082        --> TTGGTGTTCAGCCTGCAAAACACGCCACCTTTGTCCCCCACACTGCTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530331       <-- TTGGTGTTCAGCCTGCAAAACACGCCACCTTTGTCCCCCACACTGCTGGA
FD985005       <-- TTGGTGTTCAGCCTGCAAAACACGCCACCTTTGTCCCCCACACTGCTGGA
EY895286       <-- TTGGTGTTCAGCCTGCAAAACACGCCACCTTTGTCCCCCACACTGCTGGA
EY893718       <-- TTGGTGTTCAGCCTGCAAAACACGCCACCTTTGTCCCCCACACTGCTGGG
EY894360       <-- ................AAAACACGCCACCTTTGTCCCCCACACTGCTGGG
FD529565       <-- ..................................................
EY898247       --> TTGGTGTTCAGCCTGCAAAACACGCCACCTTTGTCCCCCACACTGCTGGG
EY897381       --> TTGGTGTTCAGCCTGCAAAACACGCCACCTTTGTCCCCCACACTGCTGGG
EY937467       --> TTGGTGTTCAGCCCGCAAAACACGCCACCTTTGTCCCCCACACTGCTGGA
FD962959       --> TTGGTGTTCAGCCTGCAAAACACGCCACCTTTGTCCCCCACACTGCTGGG
FD569065       --> TTGGTGTTCAGCCTGCAAAACACGCCACCTTTGTCCCCCACACTGCTGGA
FD563708       --> TTGGTGTTCAGCCTGCAAAACGCGCCACCTTTGTCCCCCACACTGCCGGA
EV525642       --> TTGGTGTTCAGCCTGCAAAACACGCCACCTTTGTCCCCCACACTGCTGGA
FD989192       --> TTGGTGTTCAGCCTGCAAAACACGCCACCTTTGTCCCCCACACTGCTGGA
FD533356       --> ..................................................

               251    -    301
UN05082        --> AGATACTCTGTCAAGAGGTTCAGGAAAGCTCAGTGCCCTATTGTCGAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530331       <-- AGATACTCTGTCAAGAGGTTCAGGAAGGCTCAGTGCCCTATTGTCGAGAG  Raphanus raphanistrum subsp. maritimus
FD985005       <-- AGATACTCTGTCAAGAGGTTCAGGAAAGCTCAGTGCCCTATTGTCGAGAG  Raphanus raphanistrum subsp. landra
EY895286       <-- AGATACTCTGTCAAGGGGTTCAGGAAGGCTCAGTGCCCTATTGTCGAGAG  Raphanus raphanistrum subsp. maritimus
EY893718       <-- AGATACTCTGTCAAGAGGTTCAGGAAAGCTCAGTGCCCCATTGTCGAGAG  Raphanus raphanistrum subsp. maritimus
EY894360       <-- AGATACTCTGTCAAGAGGTTCAGGAAAGCTCAGTGCCCTATTGTCGAGAG  Raphanus raphanistrum subsp. maritimus
FD529565       <-- .............gGAGGTTCAGGAAAGCTCAGTGCCCTATTGTCGAGAG  Raphanus raphanistrum subsp. maritimus
EY898247       --> AGATACTCTGTCAAGAGGTTCAGGAAAGCTCAGTGCCCTATTGTCGAGAG  Raphanus raphanistrum subsp. maritimus
EY897381       --> AGATACTCTGTCAAGAGGTTCAGGAAAGCTCAGTGCCCCATTGTCGAGAG  Raphanus raphanistrum subsp. maritimus
EY937467       --> AGATACTCTGTCAAGAGGTTCAGGAAGGCTCAGTGCCCTATTGTCGAGAG  Raphanus sativus cv Early Scarlet Globe
FD962959       --> AGATACTCTGTCAAGAGGTTCAGGAAAGCTCAGTGCCCTATTGTCGAGAG  Raphanus raphanistrum subsp. maritimus
FD569065       --> AGATACTCTGTCAAGAGGTTCAGGAAGGCTCAGTGCCCTATTGTCGAGAG  Raphanus sativus cv Early Scarlet Globe
FD563708       --> AGATACTCTGTCAAGAGGTTCAGGAAGGCTCAGTGCCCTATCGTCGAGAG  Raphanus sativus var. oleiformis
EV525642       --> AGATACTCTGTCAAGAGGTTCAGGAAGGCTCAGTGCCCTATTGTCGAGAG  Raphanus raphanistrum subsp. maritimus
FD989192       --> AGATACTCTGTCAAGAGGTTCAGGAAAGCTCAGTGCCCTATTGTCGAGAG  Raphanus raphanistrum subsp. landra
FD533356       --> .............gGAGGTTCAGGAAAGCTCAGTGCCCTATTGTCGAGAG  Raphanus raphanistrum subsp. maritimus

               301    -    351
UN05082        --> GCTCACTAACTCCCTCATGATGCACGGGAGGAACAACGGTAAGAAGTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530331       <-- GCTCACTAACTCCCTCATGATGCACGGGAGGAACAACGGTAAGAAGTTGA
FD985005       <-- GCTCACTAACTCCCTCATGATGCACGGGAGGAACAACGGTAAGAAGTCGA
EY895286       <-- GCTCACTAACTCCCTCATGATGCACGGGAGGAACAACGGTAAGAAGTTGA
EY893718       <-- GCTCACTAACTCCCTCATGATGCACGGGAGGAACAACGGTAAGAAGTTGA
EY894360       <-- GCTCACTAACTCCCTCATGATGCACGGGATGAACAACGGTAAGAAGTTGA
FD529565       <-- GCTCACTAACTCCCTCATGATGCACGGGAGGAACAACGGTAAGAAGTTGA
EY898247       --> GCTCACTAACTCCCTCATGATGCACGGGATGAACAACGGTAAGAAGTTGA
EY897381       --> GCTCACTAACTCCCTCATGATGCACGGGAGGAACAACGGTAAGAAGTTGA
EY937467       --> GCTCACTAACTCCCTCATGATGCACGGCAGGAACAACGGTAAGAAGCTGA
FD962959       --> GCTCACTAACTCCCTCATGATGCACGGGAGGAACAACTGTAAGAAGTTGA
FD569065       --> GCTCACTAACTCCCTCATGATGCACGGCAGGAACAACGGTAAGAAGCTGA
FD563708       --> GCTCACTAACTCTCTCATGATGCACGGGAGGAACAACGGTAAGAAGTTGA
EV525642       --> GCTCACTAACTCCCTCATGATGCACGGGAGGAACAACGGTAAGAAGTTGA
FD989192       --> GCTCACTAACTCCCTCATGATGCACGGGAGGAACAACGGTAAGAAGTCGA
FD533356       --> GCTCACTAACTCCCTCATGATGCACGGGAGGAACAACGGTAAGAAGTTGA

               351    -    401
UN05082        --> TGGCTGTCAGGATCATCAAGCACGCCATGGAGATTATCCACCTCTTGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530331       <-- TGGCTGTCAGAATCATCAAGCACGCCATGGAGATTATCCACCTCTTGACT
FD985005       <-- TGGCTGTCAGGATCATCAAGCACGCCATGGAGATTATCCACCTCTTGACT
EY895286       <-- TGGCTGTCAGAATCATCAAGCACGCCATGGAGATTATCCACCTCTTGACT
EY893718       <-- TGGCTGTCAGGATCATCAAGCACGCCATGGAGATTATCCACCTCTTGACT
EY894360       <-- TGGCTGTCAGGATCATCAAGCACGCCATGGAGATTATCCACCTCTTGACT
FD529565       <-- TGGCTGTCAGGATCATCAAGCACGCCATGGAGATTATCCACCTCTTGACT
EY898247       --> TGGCTGTCAGGATCATCAAGCACGCCATGGAGATTATCCACCTCTTGACT
EY897381       --> TGGCTGTCAGGATCATCAAGCACGCCATGGAGATTATCCACCTCTTGACT
EY937467       --> TGGCTGTCAGGATCATCAAGCACGCCATGGAGATTATCCACCTCTTGACT
FD962959       --> TGGCTGTCAGGATCATCAAGCACGCCATGGAGATTATCCACCTCTTGACT
FD569065       --> TGGCTGTCAGGATCATCAAGCACGCCATGGAGATTATCCACCTCTTGACT
FD563708       --> TGGCTGTCAGGATCATCAAGCACGCCATGGAGATCATCCACCTCTTGACT
EV525642       --> TGGCTGTCAGAATCATCAAGCACGCCATGGAGATTATCCACCTCTTGACT
FD989192       --> TGGCTGTCAGGATCATCAAGCACGCCATGGAGATTATCCACCTCTTGACT
FD533356       --> TGGCTGTCAGGATCATCAAGCACGCCATGGAGATTATCCACCTCTTGACT

               401    -    451
UN05082        --> GACGCCAACCCTATTCAAGTTATCATTGATGCCATTGTTAACAGTGGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530331       <-- GATGCCAACCCTATCCAAGTTATCATTGATGCCATTGTTAACAGTGGTCC
FD985005       <-- GACGCCAACCCTATTCAAGTTATCATTGATGCCATTGTTAACAGTGGTCC
EY895286       <-- GATGCCAACCCTATTCAAGTTATCATTGATGCCATTGTTAACAGTGGTCC
EY893718       <-- GACGCCAACCCTATTCAAGTTATCATTGATGCCATTGTTAACAGTGGTCC
EY894360       <-- GACGCCAACCCTATTCAAGTTATCATTGATGCCATTGTTAACAGTGGTCC
FD529565       <-- GACGCCAACCCTATTCAAGTTATCATTGATGCCATTGTTAACAGTGGTCC
EY898247       --> GACGCCAACCCTATTCAAGTTATCATTGATGCCATTGTTAACAGTGGTCC
EY897381       --> GACGCCAACCCTATTCAAGTTATCATTGATGCCATTGTTAACAGTGGTCC
EY937467       --> GACGCCAACCCTATTCAAGTTATCATTGATGCCATTGTTAACAGTGGTCC
FD962959       --> GACGCCAACCCTATTCAAGTTATCATTGATGCCATTGTTAACAGTGGTCC
FD569065       --> GACGCCAACCCTATTCAAGTTATCATTGATGCCATTGTTAACAGTGGTCC
FD563708       --> GACGCCAACCCTATTCAAGTTATCATTGATGCCATTGTTAACAGTGGTCC
EV525642       --> GATGCCAACCCTATCCAAGTTATCATTGATGCCATTGTTAACAGTGGTCC
FD989192       --> GACGCCAACCCTATTCAAGTTATCATTGATGCCATTGTTAACAGTGGTCC
FD533356       --> GACGCCAACCCTATTCAAGTTATCATTGATGCCATTGTTAACAGTGGTCC

               451    -    501
UN05082        --> ACGTGAAGATGCGACCAGGATCGGGTCTGCTGGTGTGGTCAGGAGACAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530331       <-- ACGTGAAGATGCGACCAGGATCGGATCTGCTGGTGTGGTGAGGAGACAGG
FD985005       <-- ACGTGAAGATGCGACCAGGATCGGGTCTGCTGGTGTGGTCAGGAGACAGG
EY895286       <-- ACGTGAAGATGCGACCAGGATCGGATCTGCTGGTGTGGTGAGGAGACAGG
EY893718       <-- ACGTGAAGATGCGACCAGGATCGGGTCTGCTGGTGTGGTCAGGAGACAGG
EY894360       <-- ACGTGAAGATGCGACCAGGATCGGGTCTGCTGGTGTGGTCAGGAGACAGG
FD529565       <-- ACGTGAAGATGCGACCAGGATCGGGTCTGCCGGTGTGGTCAGGAGACAGG
EY898247       --> ACGTGAAGATGCGACCAGGATCGGGTCTGCTGGTGTGGTCAGGAGACAGG
EY897381       --> ACGTGAAGATGCGACCAGGATCGGGTCTGCTGGTGTGGTCAGGAGACAGG
EY937467       --> ACGTGAAGATGCTACCAGGATCGGGTCTGCTGGTGTGGTCAGGAGACAGG
FD962959       --> ACGTGAAGATGCGACCAGGATCGGGTCTGCTGGTGTGGTCAGGAGACAGG
FD569065       --> ACGTGAAGATGCTACCAGGATCGGGTCTGCTGGTGTGGTCAGGAGACAGG
FD563708       --> ACGTGAAGATGCTACCAGGATCGGGTCTGCTGGTGTGGTCAGGAGACAGG
EV525642       --> ACGTGAAGATGCGACCAGGATCGGATCTGCTGGTGTGGTGAGGAGACAGG
FD989192       --> ACGTGAAGATGCGACCAGGATCGGGTCTGCTGGTGTGGTCAGGAGACAGG
FD533356       --> ACGTGAAGATGCGACCAGGATCGGGTCTGCCGGTGTGGTCAGGAGACAGG

               501    -    551
UN05082        --> CCGTTGATATCTCTCCTCTGAGACGTGTGAACCAAGCCATCTTCTTGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530331       <-- CCGTTGATATCTCTCCTCTGAGACGTGTGAACCAAGCCATCTTCTTGCTC
FD985005       <-- CCGTTGATATCTCTCCTCTGAGACGTGTGAACCAAGCCATCTTCTTGCTC
EY895286       <-- CCGTTGATATCTCTCCTCTGAGACGTGTTAACCAAGCCATCTTCTTGCTC
EY893718       <-- CCGTTGATATCTCTCCTTTGAGACGTGTGAACCAAGCCATCTTCTTGCTC
EY894360       <-- CCGTTGATATCTCTCCTCTGAGACGTGTGAACCAAGCCATCTTCTTGCTC
FD529565       <-- CCGTTGATATCTCTCCTCTGAGACGTGTGAACCAAGCCATCTTCTTGCTC
EY898247       --> CCGTTGATATCTCTCCTCTGAGACGTGTGAACCAAGCCATCTTCTTGCTC
EY897381       --> CCGTTGATATCTCTCCTCTGAGACGTGTGAACCAAGCCATCTTCTTGCTC
EY937467       --> CCGTTGATATCTCTCCTCTGAGACGTGTGAACCAAGCCATCTTCTTGCTC
FD962959       --> CCGTTGATATCTCTCCTCTGAGACGTGTGAACCAAGCCATCTTCTTGCTC
FD569065       --> CCGTTGATATCTCTCCTCTGAGACGTGTGAACCAAGCCATCTTCTTGCTC
FD563708       --> CCGTTGATATCTCTCCTCTTAGACGTGTGAACCAAGCCATCTTCTTGCTC
EV525642       --> CCGTTGATATCTCTCCTCTGAGACGTGTGAACCAAGCCATCTTCTTGCTC
FD989192       --> CCGTTGATATCTCTCCTCTGAGACGTGTGAACCAAGCCATCTTCTTGCTC
FD533356       --> CCGTTGATATCTCTCCTCTGAGACGTGTGAACCAAGCCATCTTCTTGCTC

               551    -    601
UN05082        --> ACCACTGGTGCACGTGAAGCTGCCTTCAGAAACATCAAGACAATCGCTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530331       <-- ACCACTGGTGCACGTGAAGCTGCCTTCAGAAACATCAAGACAATCGCTGA
FD985005       <-- ACCACTGGTGCACGTGAAGCTGCCTTCAGAAACATCAAGACAATCGCTGA
EY895286       <-- ACCACTGGTGCACGTGAAGCTGCCTTCAGAAACATCAAGACAATCGCTGA
EY893718       <-- ACCACTGGTGCACGTGAAGCTGCCTTCAGAAACATCAAGACAATCGCTGA
EY894360       <-- ACCACTGGTGCACGTGAAGCTGCCTTCAGAAACATCAAGACAATCGCTGA
FD529565       <-- ACCACTGGTGCACGTGAAGCTGCCTTCAGAAACATCAAGACAATCGCTGA
EY898247       --> ACCACTGGTGCACGTGAAGCTGCCTTCAGAAACATCAAGACAATCGCTGA
EY897381       --> ACCACTGGTGCACGTGAAGCTGCC..........................
EY937467       --> ACCACTGGTGCACGTGAAGCTGCCTTCAGAAACATCAAGACAATCGCTGA
FD962959       --> ACCACTGGTGCACGTGAAGCTGCCTTCAGAAACATCAAGACAATCGCTGA
FD569065       --> ACCACTGGTGCACGTGAAGCTGCCTTCAGAAACATCAAGACAATCGCTGA
FD563708       --> ACCACTGGTGCACGTGAAGCTGCCTTCAGAAACATCAAGACAATCGCTGA
EV525642       --> ACCACTGGTGCACGTGAAGCTGCCTTCAGAAACATCAAGACAATCGCTGA
FD989192       --> ACCACTGGTGCACGTGAAGCTGCCTTCAGAAACATCAAGACAATCGCTGA
FD533356       --> ACCACTGGTGCACGTGAAGCTGCCTTCAGAAACATCAAGACAATCGCTGA

               601    -    651
UN05082        --> GTGCCTCGCTGATGAGCTCATCAATGCTGCTAAAGGATCTTCCAACAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530331       <-- GTGCCTCGCTGATGAGCTCATCAATGCTGCTAAAGGATCTTCCAACAGTT
FD985005       <-- GTGCCTCGCTGATGAGCTCATCAATGCTGCTAAAGGATCTTCCAACAGTT
EY895286       <-- GTGCCTCGCTGATGAGCTCATCAATGCTGCTAAAGGATCTTCCAACAGTT
EY893718       <-- GTGCCTCGCTGATGGGCTCATCAATGCTGCTAAAGGATCTTCCAACAGCT
EY894360       <-- GTGCCTCGCTGATGAGCTCATCAATGCTGCTAAAGGATCTTCCAACAGTT
FD529565       <-- GTGCCTCGCTGATGAGCTCATCAATGCTGCTAAAGGATCTTCCAACAGCT
EY898247       --> GTGCCTCGCTGATGAGCTCATCAATGCTGCTAAAGGATCTTCCAACAGTT
EY897381       --> ..................................................
EY937467       --> GTGCCTCGCTGATGAGCTCATCAATGCTGCTAA.................
FD962959       --> GTGCCTCGCTGATGAGCTCATCAATGCTGCTAAAGGATCTTCCAACAGTT
FD569065       --> GTGCCTCGCTGATGGGCTCATCAATGCTGCTAAAGGATCTTCCAACAGCT
FD563708       --> GTGCCTCGCTGATGAGCTCATCAATGCTGCTAAAGGATCTTCCAACAGCT
EV525642       --> GTGCCTCGCTGATGAGCTCATCAATGCTGCTAAAGGATCTTCCAACAGTT
FD989192       --> GTGCCTCGCTGATGAGCTCATCAATGCTGCTAAAGGATCTTCCAACAGTT
FD533356       --> GTGCCTCGCTGATGAGCTCATCAATGCTGCTAAAGGATCTTCCAACAGCT

               651    -    701
UN05082        --> ATGCCATCAAGAAGAAAGATGAGATCGAGAGAGTTGCTAAGGCCAACCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530331       <-- ATGCCATCAAGAAGAAAGATGAGATCGAGAGAGTTGCTAAGGCCAACCGT
FD985005       <-- ATGCCATCAAGAAGAAAGATGAGATCGAGAGAGTTGCTAAGGCCAACCGT
EY895286       <-- ATGCCATCAAGAAGAAAGATGAGATCGAGAGAGTTGCTAAGGCCAACCGT
EY893718       <-- ATGCCATCAAGAAGAAAGATGAGATCGAGAGAGTTGCTAAGGCCAACCGT
EY894360       <-- ATGCCATCAAGAAGAAAGATGAGATCGAGAGAGTTGCTAAGGCCAACCGT
FD529565       <-- ATGCCATCAAGAAGAAAGATGAGATCGAGAGAGTTGCTAAGGCCAACCGT
EY898247       --> ATGCCATCAAGAAGAAAGATGAGATCGAGAGAGTTGCTAAG-CCAACC..
EY897381       --> ..................................................
EY937467       --> ..................................................
FD962959       --> ATGCCATCAAGAAGAAAGATGAGATCGAGATAGTTGCTAAG-CCAACCGT
FD569065       --> ATGCCAT...........................................
FD563708       --> ATGCCATCAAGAAGAAAGACGAGATCGAGAGAGTTGCTAAG-CCAACCGT
EV525642       --> ATGCCATCAAGAAGAAAGATGAGATCGAGAGAGTTGCTAAGGCCAACCGT
FD989192       --> ATGCCATCAAGAAGAAAGATGAGATCGAGAGAGTTGCTAAAGCCAACCGT
FD533356       --> ATGCCATCAAGAAGAAAGATGAGATCGAGAGAGTTGCTAAGGCCAACCGT

               701    -    751
UN05082        --> TAAGGGTTCTTCCTTAGTTTTTTT-GCATT-ATTATCTCAAATAAGCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530331       <-- TAAGGGTTCTTCCTTAGTTTTTTT-GCATT-ATTATCTCAAATAAGCTTT
FD985005       <-- TAAGGGTTCTTCCTTAGTTTTTTT-GCATT-ATTATCTCAAATAAGCTTT
EY895286       <-- TAAGGGTTCTTCCTTAGTTTTTTT-GCATT-ATTATCTCAAATAAGCTTT
EY893718       <-- TAAGGGTTCTTCCTTAGTTTTTTT-TCATT-ATTATCTCAAATAAGCTTT
EY894360       <-- TAAGGGTTCTTCCTTAGTTTTTTT-GCATT-ATTATCTCAAATAAGCTTT
FD529565       <-- TAAGGGTTCTTCCTTAGTTTTTTT-GCATT-ATTATCTCAAATAAGCTTT
EY898247       --> ..................................................
EY897381       --> ..................................................
EY937467       --> ..................................................
FD962959       --> TAAGGGTTCTTCCTTAGTTTTTTT-GCATT-ATTATCTCA..........
FD569065       --> ..................................................
FD563708       --> TAAGGGCTCTTCCTTAGTTTTTTTTTTGTTCATTATCTCAAATAAGCTTT
EV525642       --> TAAGGGTTCTTCCTTAGTTTTTTT-GCATT-ATTATCTCAAATAAGCTTT
FD989192       --> TAAGGGTTCTTCCTTAGTTTTTT--GCATT-ATTATCTCAAATAAGCTTT
FD533356       --> TAAGGGTTCTTCCTTAGTTTTTTT-GCATT-ATTATCTCAAATAAGCTTT

               751    -    801
UN05082        --> TGTGCTGTTTTCGTTAGCTTTTGATAATGTTAAAGAATATTTCTCCCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530331       <-- TGTGCTGTTTTCGTTAGCTTTTGATAATGTTAAAGAATATTTCTCCCATC
FD985005       <-- TGTGCTGTTTTCGTTAGCTTTTGATAATGTTAAAGAATATTTCTCCCATC
EY895286       <-- TGTGCTGTTTTCGTTAGCTTTTGATAATGTTAAAGAATATTTCTCCCATC
EY893718       <-- TGTGCTGTTTTCGTTAGCTTTTGATAATGTTAAAGAATATTTCTCCCATC
EY894360       <-- TGTGCTGTTTTCTTTAGCTTTTGATAATGTTAAAGAATATTTCCCCCATC
FD529565       <-- TGTGCTGTTTTCGTTAGCTTTTGATAATGTTA..................
EY898247       --> ..................................................
EY897381       --> ..................................................
EY937467       --> ..................................................
FD962959       --> ..................................................
FD569065       --> ..................................................
FD563708       --> TGTGCcg...........................................
EV525642       --> TGTGCTGTTTTCGTTAGCTTTTGATAATGTTAAAGAATATTTCTCCCATC
FD989192       --> TGTGCTGTTTTCGTTAGCTTTTGATAATGTTAAAGAATATTTCTCCCATC
FD533356       --> TGTGCTGTTTTCGTTAGCTTTTGATAATGTTAAAGAATATTTCTCCCATC

               801    -    851
UN05082        --> TTTTAATGAAGTTTTTGACGCTTTAATCGACTTTGGGATCTTGACCAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530331       <-- TTTTAATGAAGTTTTTGACGCTTTAATCGACTTTGGGATCTTGACCAGAC
FD985005       <-- TTTTAATGAA........................................
EY895286       <-- TTTTAATGAA........................................
EY893718       <-- TTTTAATGAAGTTTTTGACGCTTTAATCG.....................
EY894360       <-- TTTTAATGAA........................................
FD529565       <-- ..................................................
EY898247       --> ..................................................
EY897381       --> ..................................................
EY937467       --> ..................................................
FD962959       --> ..................................................
FD569065       --> ..................................................
FD563708       --> ..................................................
EV525642       --> TTTTAATGAAGTTTTTGACGCTTTAATCGACTTTGGGATCTTGACCAGAC
FD989192       --> TTTTAATGAA........................................
FD533356       --> TTTTAATGAA........................................

               851    -    901
UN05082        --> AGATTCATATTTATGAGTATTTTCATTTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530331       <-- AGATTCATATTTATGAGTATTTTCATTTAC
FD985005       <-- ..............................
EY895286       <-- ..............................
EY893718       <-- ..............................
EY894360       <-- ..............................
FD529565       <-- ..............................
EY898247       --> ..............................
EY897381       --> ..............................
EY937467       --> ..............................
FD962959       --> ..............................
FD569065       --> ..............................
FD563708       --> ..............................
EV525642       --> AGATTCATATTTATGA..............
FD989192       --> ..............................
FD533356       --> ..............................