1      -     51
UN05468        --> CGTGGTTAGAAAAAAAATGTATAACCAAAGAAGAAAGACACAAATGTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565229       <-- ................................................GG
FD564550       <-- ..................................................
EV565228       <-- ..................................................
FD568008       --> CGTGGTTAGAAAAAAAATGTATAACCAAAGAAAAAAGACACAAATGTTGG
FY450808       --> ...GGTTAGAAAAAAA-TGTATAACCAAAGAAGAAAGACACAAATGTTGG
EV570546       --> ................................................GG
EV570547       --> ................................................GG
FY453725       --> ..................................................

               51     -    101
UN05468        --> GTTATGTAATCCAACCCCATTCTTAAAGGGAAACCATATCACATTCAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565229       <-- GTTATGTAATCCAACCCCATTCTTAAAGGGAAACCATATCACATTCAAAT
FD564550       <-- ..................................................
EV565228       <-- ..................................................
FD568008       --> GTTATGTAATCCAACCCCATTCTTAAAGGGAAACCATATCACATTCAAAT
FY450808       --> GTTATGTAATCCAACCCCATTCTTAAAGGGAAACCATATCACATTCAAAT
EV570546       --> GTTATGTAATCCAACCCCATTCTTAAAGGGAAACCATATCACATTCAAAT
EV570547       --> GTTATGTAATCCAACCCCATTCTTAAAGGGAAACCATATCACATTCAAAT
FY453725       --> ..................................................

               101    -    151
UN05468        --> CTCCCACATACCATTCCCACAAAGAAGTATATCATGAGACGTGCTCGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565229       <-- CTCCCACATACCATTCCCACAAAGTAGTATACCATGAGATGTGCTCGAGA  Raphanus raphanistrum subsp. landra
FD564550       <-- .tctccCATACCATTCCCACAAAGAAGTATATCATGAGACGTGCTCGAGA  Raphanus sativus var. oleiformis
EV565228       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD568008       --> CTCCCA--TACCATTCCCACAAAGAAGTATATCATGAGACGTGCTCGAGA  Raphanus sativus var. oleiformis
FY450808       --> CTCCCA--TACCATTCCCACAAAGAAGTATATCATGAGACGTGCTCGAGA  Raphanus sativus cv GSK3-1
EV570546       --> CTCCCACATACCATTCCCACAAAGTAGTATACCATGAGATGTGCTCGAGA  Raphanus raphanistrum subsp. landra
EV570547       --> CTCCCACATACCATTCCCACAAAGTAGTATACCATGAGATGTGCTCGAGA  Raphanus raphanistrum subsp. landra
FY453725       --> ..........CCATTCCCACAAAGAAGTATATCATGAGACGTGCTCGAGA  Raphanus sativus cv GSK3-1

               151    -    201
UN05468        --> ACTTAAAAGACCCAATTAGTCGGAACTAAAAACAATCCGAATAAAGAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565229       <-- ACTTAAAAGACCCAATTAGTCGGAACTAAAACCAATCCGAATAAAGAACA  Raphanus raphanistrum subsp. landra
FD564550       <-- ACTTAAAAGACCCAATTAGTCGGAACTAAAAACAATCCGAATAAAGAACA  Raphanus sativus var. oleiformis
EV565228       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD568008       --> ACTTAAAAAACCCAATTAGTCGGAACTAAAAACAATCCGAATAAAGAACA  Raphanus sativus var. oleiformis
FY450808       --> ACTTAAAAGACCCAATTAGTCGGAACTAAAAACAATCCGAATAAAGAACA  Raphanus sativus cv GSK3-1
EV570546       --> ACTTAAAAGACCCAATTAGTCGGAACTAAAACCAATCCGAATAAAGAACA  Raphanus raphanistrum subsp. landra
EV570547       --> ACTTAAAAGACCCAATTAGTCGGAACTAAAACCAATCCGAATAAAGAACA  Raphanus raphanistrum subsp. landra
FY453725       --> ACTTAAAAGACCCAATTAGTCGGAACTAAAAACAATCCGAATAAAGAACA  Raphanus sativus cv GSK3-1

               201    -    251
UN05468        --> AACGAACAATATCTCTCAGTAGCCATTGATATGCTTTGGTTTCGTTGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565229       <-- AACGAACAATGTCTCTCAGTAGCCATTAATATGCTTTGGTTTCGTTGTTG  Raphanus raphanistrum subsp. landra
FD564550       <-- AACGAACAATATCTCTCAGTAGCCATTGATATGCTTTGGTTTCGTTGTTG  Raphanus sativus var. oleiformis
EV565228       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD568008       --> AACGAACAATATCTCTCAGTAGCCATTGATATGCTTTGGTTTCGTTGTTG  Raphanus sativus var. oleiformis
FY450808       --> AACGAACAATATCTCTCAGTAGCCATTGATATGCTTTGGTTTCGTTGTTG  Raphanus sativus cv GSK3-1
EV570546       --> AACGAACAATGTCTCTCAGTAGCCATTAATATGCTTTGGTTTCGTTGTTG  Raphanus raphanistrum subsp. landra
EV570547       --> AACGAACAATGTCTCTCAGTAGCCATTAATATGCTTTGGTTTCGTTGTTG  Raphanus raphanistrum subsp. landra
FY453725       --> AACGAACAATATCTCTCAGTAGCCATTGATATGCTTTGGTTTCGTTGTTG  Raphanus sativus cv GSK3-1

               251    -    301
UN05468        --> TCGATCCTACCAACCGAGAGAATGGTTGCTGCGTTTGGTTGTTGCGGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565229       <-- TCGATCCTACCAACCGAGAGAACGGTTGCTGCGTTTGGTTGTTGCGGCTC  Raphanus raphanistrum subsp. landra
FD564550       <-- TCGATCCTACCAACCGAGAGAATGGTTGCTGCGTTTGGTTGTTGCGGCTC  Raphanus sativus var. oleiformis
EV565228       <-- ......tacCCAACCGAGAGAACGGTTGCTGCGTTTGGTTGTTGCGGCTC  Raphanus raphanistrum subsp. landra
FD568008       --> TCGATCCTACCAACCGAAAAAATGGTTGCTGCGTTTGGTTGTTGCGGCTC  Raphanus sativus var. oleiformis
FY450808       --> TCGATCCTACCAACCGAGAGAATGGTTGCTGCGTTTGGTTGTTGCGGCTC  Raphanus sativus cv GSK3-1
EV570546       --> TCGATCCTACCAACCGAGAGAACGGTTGCTGCGTTTGGTTGTTGCGGCTC  Raphanus raphanistrum subsp. landra
EV570547       --> TCGATCCTACCAACCGAGAGAACGGTTGCTGCGTTTGGTTGTTGCGGCTC  Raphanus raphanistrum subsp. landra
FY453725       --> TCGATCCTACCAACCGAGAGAATGGTTGCTGCGTTTGGTTGTTGCGGCTC  Raphanus sativus cv GSK3-1

               301    -    351
UN05468        --> GTGTTAAAACTGTTGCTTCCTGTTCCGGATTTAGGGTCAGAGTAGGCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565229       <-- GTGTTAAAACTGCTGCTTCCTGTTCCGGATTTAGGGTCAGAGTAGGCTTG  Raphanus raphanistrum subsp. landra
FD564550       <-- ATGTTAAAACTGTTGCTTCCTGTTCCGGATTTAGGGTCAGAGTAGGCTTG  Raphanus sativus var. oleiformis
EV565228       <-- GTGTTAAAACTGCTGCTTCCTGTTCCGGATTTAGGGTCAGAGTAGGCTTG  Raphanus raphanistrum subsp. landra
FD568008       --> ATGTTAAAACTGTTGCTTCCTGTTCCGGATTTAGGGTCAAAGTAGGCTTG  Raphanus sativus var. oleiformis
FY450808       --> ATGTTAAAACTGTTGCTTCCTGTTCCGGATTTAGGGTCAGAGTAGGCTTG  Raphanus sativus cv GSK3-1
EV570546       --> GTGTTAAAACTGCTGCTTCCTGTTCCGGATTTAGGGTCAGAGTAGGCTTG  Raphanus raphanistrum subsp. landra
EV570547       --> GTGTTAAAACTGCTGCTTCCTGTTCCGGATTTAGGGTCAGAGTAGGCTTG  Raphanus raphanistrum subsp. landra
FY453725       --> ATGTTAAAACTGTTGCTTCCTGTTCCGGATTTAGGGTCAGAGTAGGCTTG  Raphanus sativus cv GSK3-1

               351    -    401
UN05468        --> AGCTAGCTCAAGAGGAGATGCTGCTTTCCCGGGACGGTGCCCTGTTCCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565229       <-- AGCTAGCTCAAGAGGAGATGCTGCTTTCCCGGGACGGTGCCCTGTTCCGT
FD564550       <-- AGCTAGCTCAAGAGGAGATGCTGCTTTCCCGGGACGGTGCCCTGTTCCGT
EV565228       <-- AGCTAGCTCAAGAGGAGATGCTGCTTTCCCGGGACGGTGCCCTGTTCCGT
FD568008       --> AGCTAGCTCAAGAGGAAATGCTGCTTTCCCGGGACGGTGCCCTGTTCCGT
FY450808       --> AGCTAGCTCAAGAGGAGATGCTGCTTTCCCGGGACGGTGCCCTGTTCCGT
EV570546       --> AGCTAGCTCAAGAGGAGATGCTGCTTTCCCGGGACGGTGCCCTGTTCCGT
EV570547       --> AGCTAGCTCAAGAGGAGATGCTGCTTTCCCGGGACGGTGCCCTGTTCCGT
FY453725       --> AGCTAGCTCAAGAGGAGATGCTGCTTTCCCGGGACGGTGCCCTGTTCCGT

               401    -    451
UN05468        --> CTGGTGACTCCGGTTTCTGTGGAACTGGTTTTCGCCGTGTCTCTGGTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565229       <-- CTGGTGACTCCGGTTTCTGTGGAACTGGTTTCCGCCGTGTCTCTGGTGAT  Raphanus raphanistrum subsp. landra
FD564550       <-- CTGGTGACTCCGGTTTCTGTGGAACTGGTTTTCGCCATGTCTCTGGTGAT  Raphanus sativus var. oleiformis
EV565228       <-- CTGGTGACTCCGGTTTCTGTGGAACTGGTTTCCGCCGTGTCTCTGGTGAT  Raphanus raphanistrum subsp. landra
FD568008       --> CTGGTGACTCCGGTTTCTGTGGAACTGGTTTTCGCCATGTCTCTGGTGAT  Raphanus sativus var. oleiformis
FY450808       --> CTGGTGACTCCGGTTTCTGTGGAACTGGTTTTCGCCATGTCTCTGGTGAT  Raphanus sativus cv GSK3-1
EV570546       --> CTGGTGACTCCGGTTTCTGTGGAACTGGTTTCCGCCGTGTCTCTGGTGAT  Raphanus raphanistrum subsp. landra
EV570547       --> CTGGTGACTCCGGTTTCTGTGGAACTGGTTTCCGCCGTGTCTCTGGTGAT  Raphanus raphanistrum subsp. landra
FY453725       --> CTGGTGACTCCGGTTTCTGTGGAACTGGTTTTCGCCATGTCTCTGGTGAT  Raphanus sativus cv GSK3-1

               451    -    501
UN05468        --> GGATGCCTCGTCTTCTCCTGAGCCTGCGGTTGCTGCTGTCTTGTGCTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565229       <-- GGATGCCTCGTCTTCTCCTGAGCCTGCGGTTGCTGCTGTCTTGTGCTCTT
FD564550       <-- GGATGCCTCGTCTTCTCCTGAGCCTGCGGTTGCTGCTGTCTTGTGCTCTT
EV565228       <-- GGATGCCTCGTCTTCTCCTGAGCCTGCGGTTGCTGCTGTCTTGTGCTCTT
FD568008       --> GGATGCCTCGTCTTCTCCTGAGCCTGCGGTTGCTGCTGTCTTGTGCTCTT
FY450808       --> GGATGCCTCGTCTTCTCCTGAGCCTGCGGTTGCTGCTGTCTTGTGCTCTT
EV570546       --> GGATGCCTCGTCTTCTCCTGAGCCTGCGGTTGCTGCTGTCTTGTGCTCTT
EV570547       --> GGATGCCTCGTCTTCTCCTGAGCCTGCGGTTGCTGCTGTCTTGTGCTCTT
FY453725       --> GGATGCCTCGTCTTCTCCTGAGCCTGCGGTTGCTGCTGTCTTGTGCTCTT

               501    -    551
UN05468        --> GACATCATTATTATCACGCCAGTTTCGCCTCTGGGTTTCGGATCTGGTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565229       <-- GACATCATTATTATCACGCCAGTTTCGCCTCTGGGTTTCGGATCTGGTGG
FD564550       <-- GACATCATAATTATAACGCCAGTTTCGCCTCTGGGTTTCGGATCTGGTGG
EV565228       <-- GACATCATTATTA.....................................
FD568008       --> GACATCATAATTATAACGCCAGTTTCGCCTCTGGGTTTCGGATCTGGTGG
FY450808       --> GACATCATTATTATCACGCCAGCTTCGtttcgcctctgggtttcgacgg.
EV570546       --> GACATCATTATTATCACGCCAGTTTCGCCTCTGGGTTTCGGATCTGGTGG
EV570547       --> GACATCATTATTATCACGCCAGTTTCGCCTCTGGGTTTCGGATCTGGTGG
FY453725       --> GACATCATTATTATCACGCCAGTTTCGCCTCTGGGTTTCGGATCTGGTGG

               551    -    601
UN05468        --> CAACGTCGCTTACACTTCTCACGTCCTTTTGGTCGAATTTCCTCGTTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565229       <-- CAACGTCGCTTACACTTCTCACGTCCTTTTGGTCGAATTTCCTCGTTCTC  Raphanus raphanistrum subsp. landra
FD564550       <-- CAACGTCGCTTACACTTCTCACGTCCTTTTGGTCGAATTTCCTCGTTCTC  Raphanus sativus var. oleiformis
EV565228       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD568008       --> CAACGTCGCTTACACTTCTCACGTCCTTTTGGTCGAATTTCCTCGTTCTC  Raphanus sativus var. oleiformis
FY450808       --> ..................................................  Raphanus sativus cv GSK3-1
EV570546       --> CAACGTCGCTTACACTTCTCACGTCCTTTTGGTCGAATTTCCTCGTTCTC  Raphanus raphanistrum subsp. landra
EV570547       --> CAACGTCGCTTACACTTCTCACGTCCTTTTGGTCGAATTTCCTCGTTCTC  Raphanus raphanistrum subsp. landra
FY453725       --> CAACGTCGCTTACACTTCTCACGTCCTTTTGGTCGAATTTCCTCGTTCTC  Raphanus sativus cv GSK3-1

               601    -    651
UN05468        --> GGGTCACGAGGAGAACTCACTGGTCTTTGGACTGCGTGCTCTGGAACTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565229       <-- GGGTCACGAGGAGAACTCACTGGTCTc.......................  Raphanus raphanistrum subsp. landra
FD564550       <-- AGGTCACGAGGAGAACTCACTGGTCTTTGGACTGCGTGCTCTGGAACTGG  Raphanus sativus var. oleiformis
EV565228       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD568008       --> AGGTCACGAGGAGAACTCACTGGTCTTTGGACTGCGTGCTCTGGAACTGG  Raphanus sativus var. oleiformis
FY450808       --> ..................................................  Raphanus sativus cv GSK3-1
EV570546       --> GGGTCACGAGGAGAACTCACTGGTCTc.......................  Raphanus raphanistrum subsp. landra
EV570547       --> GGGTCACGAGGAGAACTCACTGGTCTc.......................  Raphanus raphanistrum subsp. landra
FY453725       --> AGGTCACGAGGAGAACTCACTGGTCTTTGGACTGCGTGCTCTGGAACTGG  Raphanus sativus cv GSK3-1

               651    -    701
UN05468        --> AACTCTTTCGATCGGATTGAGGACAGTCCTTTCTAACTGTTGCTCCAATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565229       <-- ..................................................
FD564550       <-- AACTCTTTCGATCGGATTGAGGACAGTCCTTTCTAACTGTTGCTCCAATT
EV565228       <-- ..................................................
FD568008       --> AACTCTTTCGATC.....................................
FY450808       --> ..................................................
EV570546       --> ..................................................
EV570547       --> ..................................................
FY453725       --> AACTCTTTCGATCGGATTGAGGACAGTCCTTTCTAACTGTTGCTCCAATT

               701    -    751
UN05468        --> TTTGATGCTCAGTCTCATCAATGCCTCGCTCCTTCAACACCAGCTCTCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565229       <-- ..................................................
FD564550       <-- TTTGATGCTCAGTCTCATCAATc...........................
EV565228       <-- ..................................................
FD568008       --> ..................................................
FY450808       --> ..................................................
EV570546       --> ..................................................
EV570547       --> ..................................................
FY453725       --> TTTGATGCTCAGTCTCATCAATGCCTCGCTCCTTCAACACCAGCTCTCGT

               751    -    801
UN05468        --> GGTCGGGCACCGCCAAAAACTGCGTTTCTCTCCTTTTCAGTCTTAACTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565229       <-- ..................................................
FD564550       <-- ..................................................
EV565228       <-- ..................................................
FD568008       --> ..................................................
FY450808       --> ..................................................
EV570546       --> ..................................................
EV570547       --> ..................................................
FY453725       --> GGTCGGGCACCGCCAAAAACTGCGTTTCTCTCCTTTTCAGTCTTAACTTC

               801    -    851
UN05468        --> TGGCTTCTCAAGCAACTGTGCCACAGGCTTCAGATTCAACTTGGGGCGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565229       <-- ..................................................
FD564550       <-- ..................................................
EV565228       <-- ..................................................
FD568008       --> ..................................................
FY450808       --> ..................................................
EV570546       --> ..................................................
EV570547       --> ..................................................
FY453725       --> TGGCTTCTCAAGCAACTGTGCCACAGGCTTCAGATTCAACTTGGGGCGCT

               851    -    901
UN05468        --> CAACCGGTTTGCTAGGAATCTCATCTGCAGACAACCCAGGTTTTGAAACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV565229       <-- ..................................................
FD564550       <-- ..................................................
EV565228       <-- ..................................................
FD568008       --> ..................................................
FY450808       --> ..................................................
EV570546       --> ..................................................
EV570547       --> ..................................................
FY453725       --> CAACCGGTTTGCTAGGAATCTCATCTGCAGACAACCCAGGTTTTGAAACG

               901    -    951
UN05468        --> TTCATATTCTTCTGTGTCGCATA
                   ~~~~~~~~~~~~~~~~~~~~~~~
EV565229       <-- .......................
FD564550       <-- .......................
EV565228       <-- .......................
FD568008       --> .......................
FY450808       --> .......................
EV570546       --> .......................
EV570547       --> .......................
FY453725       --> TTCATATTCTTCTGTGTCGCATA