RadishBase

| | | |
Alignment for radish unigene UN05643

               1      -     51
UN05643        --> GTGCTTGCACGCTGACTAAACTTGTTCTTAGATTGGAAGAGGTTCAGCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552850       <-- ..................................................
FD552875       <-- ..................................................
FD934710       <-- ..................................................
EV530736       <-- ..................................................
FD983513       <-- ..................................................
FD547764       <-- ..................................................
FD555763       <-- ..................................................
FD582151       <-- ..................................................
FD938296       --> GTGCTTGCACGCTGACTAAACTTGTTCTTAGATTGGAAGAGGTTCAGCCA
FD556575       --> ..................................................
FD560160       --> ..................................................
FD987458       --> ..................................................
FD556606       --> ..................................................
FD564681       --> ..................................................
FD969846       --> ..................................................
FD577928       --> ..................................................
FD550448       --> ..................................................
EV526195       --> ..................................................
FD956560       --> ..................................................
FD551922       --> ..................................................

               51     -    101
UN05643        --> TCTAAAACTGAAGTGAACAAGACAGTCACACAGGCTTTACTGATCATGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552850       <-- ..................................................
FD552875       <-- ..................................................
FD934710       <-- ..................................................
EV530736       <-- ..................................................
FD983513       <-- ..................................................
FD547764       <-- ..................................................
FD555763       <-- ..................................................
FD582151       <-- ..................................................
FD938296       --> TCTAAAACTGAAGTGAACAAGACAGTCACACAGGCTTTACTGATCATGGT
FD556575       --> ..................................................
FD560160       --> ..................................................
FD987458       --> ..................................................
FD556606       --> ..................................................
FD564681       --> ..................................................
FD969846       --> ..................................................
FD577928       --> ..................................................
FD550448       --> ..................................................
EV526195       --> ..................................................
FD956560       --> ..................................................
FD551922       --> ..................................................

               101    -    151
UN05643        --> TTCTATGCTGCAATTTGGTCAATCTCCTGCTTCTCCACACCCTATTGATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552850       <-- ..................................................
FD552875       <-- ..................................................
FD934710       <-- ..................................................
EV530736       <-- ..................................................
FD983513       <-- ..................................................
FD547764       <-- ..................................................
FD555763       <-- ..................................................
FD582151       <-- ..................................................
FD938296       --> TTCTATGCTGCAACTTGGTCAATCTCCTGCTTCTCCACACCCTATTGATA
FD556575       --> .....gGCTGCAATTTGGTCAATCTCCTGCTTCTCCACACCCTATTGATA
FD560160       --> ..................................................
FD987458       --> ..................................................
FD556606       --> ..................................................
FD564681       --> ..................................................
FD969846       --> ..................................................
FD577928       --> ..................................................
FD550448       --> ..................................................
EV526195       --> ..................................................
FD956560       --> ..................................................
FD551922       --> ..................................................

               151    -    201
UN05643        --> ATGATTCGTACGAGAGGATTGTCTTGTGCATAAAATTGCTTTGCCATAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552850       <-- ..................................................
FD552875       <-- ..................................................
FD934710       <-- ..................................................
EV530736       <-- ..................................................
FD983513       <-- ..................................................
FD547764       <-- ..................................................
FD555763       <-- ..................................................
FD582151       <-- ..................................................
FD938296       --> ATGATTCGTACGAGAGGATTGTCTTGTGCATAAAATTGCTTTGCCATAGG
FD556575       --> ATGATTCGTACGAGAGGATTGTCTTGTGCATAAAATTGCTTTGCCATAGG
FD560160       --> ..................................................
FD987458       --> ..................................................
FD556606       --> ..................................................
FD564681       --> ..................................................
FD969846       --> ..................................................
FD577928       --> ..................................................
FD550448       --> ..................................................
EV526195       --> ..................................................
FD956560       --> ..................................................
FD551922       --> ..................................................

               201    -    251
UN05643        --> AATGATGAGATGAAAAAGATATGGCTGGAATCCTGCCGCCAGAGTTTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552850       <-- ..................................................
FD552875       <-- ..................................................
FD934710       <-- ..................................................
EV530736       <-- ..................................................
FD983513       <-- ..................................................
FD547764       <-- ..................................................
FD555763       <-- ..................................................
FD582151       <-- ..................................................
FD938296       --> AATGATGAGATGAAAAAGATATGGCTGGAATCCTGCCGCCAGAGTTTTGT
FD556575       --> AATGATGAGATGAAAAAGATATGGCTGGAATCCTGCCGCCAGAGTTTTGT
FD560160       --> ..................................................
FD987458       --> ..................................................
FD556606       --> ..................................................
FD564681       --> ..................................................
FD969846       --> ..................................................
FD577928       --> ..................................................
FD550448       --> ..................................................
EV526195       --> ..................................................
FD956560       --> ..................................................
FD551922       --> ..................................................

               251    -    301
UN05643        --> CAAGATGATTTCTGAAAAACAGCTGACCGAGATGGCCGAACTTAAGGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552850       <-- ..................................................
FD552875       <-- ..................................................
FD934710       <-- ..................................................
EV530736       <-- ..................................................
FD983513       <-- ..................................................
FD547764       <-- ..................................................
FD555763       <-- ..................................................
FD582151       <-- ..................................................
FD938296       --> CAAGATGATTTCTGAAAAACAGCTGACCGAGATGGCCGAACTTAAGGCAA
FD556575       --> CAAGATGATTTCTGAAAAACAGCTGACCGAGATGGCCGAACTTAAGGCAA
FD560160       --> ..................................................
FD987458       --> ..................................................
FD556606       --> ..................................................
FD564681       --> ..................................................
FD969846       --> ..................................................
FD577928       --> ..................................................
FD550448       --> ..................................................
EV526195       --> ..................................................
FD956560       --> ..................................................
FD551922       --> ..................................................

               301    -    351
UN05643        --> AGACCCAAACAACTAATGCTCAGCCTGATGATCTCATTGACTTCTTCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552850       <-- ..................................................
FD552875       <-- ..................................................
FD934710       <-- ..................................................
EV530736       <-- ..................................................
FD983513       <-- ..................................................
FD547764       <-- ..................................................
FD555763       <-- ..................................................
FD582151       <-- ..................................................
FD938296       --> AGACCCAAACAACTAATGCTCAGCCTGATGATCTCATTGACTTCTTCCAT
FD556575       --> AGACCCAAACAACTAATGCTCAGCCTGATGATCTCATTGACTTCTTCCAT
FD560160       --> ..................................................
FD987458       --> ..................................................
FD556606       --> ..................................................
FD564681       --> ..................................................
FD969846       --> ..................................................
FD577928       --> ..................................................
FD550448       --> ..................................................
EV526195       --> ..................................................
FD956560       --> ..................................................
FD551922       --> ..................................................

               351    -    401
UN05643        --> CTAAAGAGCCGGAAGGGAATGAGTCAACTTGAGTTGGAAGACCAGGTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552850       <-- ..................................................
FD552875       <-- ..................................................
FD934710       <-- ..................................................
EV530736       <-- ..................................................
FD983513       <-- ..................................................
FD547764       <-- ..................................................
FD555763       <-- ..................................................
FD582151       <-- ..................................................
FD938296       --> CTAAAGAGCCGGAAGGGAATGAGTCAACTTGAGTTGGAAGACCAGGTACA
FD556575       --> CTAAAGAGCCGGAAGGGAATGAGTCAACTTGAGTTGGAAGACCAGGTACA
FD560160       --> .gAAAGAGCCGGAAGGGAATGAGTCAACTTGAGTTGGAAGACCAGGTACA
FD987458       --> .gAAAGAGCCGGAAGGGAATGAGTCAACTTGAGTTGGAAGACCAGGTACA
FD556606       --> ..................................................
FD564681       --> ..................................................
FD969846       --> ..................................................
FD577928       --> ..................................................
FD550448       --> ..................................................
EV526195       --> ..................................................
FD956560       --> ..................................................
FD551922       --> ..................................................

               401    -    451
UN05643        --> AGATGACCTAAAGCGTGCAACTGGAGAATTCACCAAGGACGAGAACGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552850       <-- ..................................................
FD552875       <-- ..................................................
FD934710       <-- ..................................................
EV530736       <-- ..................................................
FD983513       <-- ..................................................
FD547764       <-- ..................................................
FD555763       <-- ..................................................
FD582151       <-- ..................................................
FD938296       --> AGATGACCTAAAGCGTGCAACTGGAGAATTCACCAAGGACGAGAACGATG
FD556575       --> AGATGACCTAAAGCGTGCAACTGGAGAATTCACCAAGGACGAGAACGATG
FD560160       --> AGATGACCTAAAGCGTGCAACTGGAGAATTCACCAAGGACGAGAACGATG
FD987458       --> AGATGACCTAAAGCGTGCAACTGGAGAATTCACCAAGGACGAGAACGATG
FD556606       --> ...gGACCTAAAGCGTGCAACTGGAGAATTCACCAAGGACGAGAACGATG
FD564681       --> ..............GTGCAACTGGA-AATTCACCAAGGACGAGAACGATG
FD969846       --> ..................................................
FD577928       --> ..................................................
FD550448       --> ..................................................
EV526195       --> ..................................................
FD956560       --> ..................................................
FD551922       --> ..................................................

               451    -    501
UN05643        --> CCAACAAACTCAACCGCATTCTTCAACTCACAGGATTCAGTGATCCGGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552850       <-- ..................................................
FD552875       <-- ..................................................
FD934710       <-- ..................................................
EV530736       <-- ..................................................
FD983513       <-- ..................................................
FD547764       <-- ..................................................
FD555763       <-- ..................................................
FD582151       <-- ..................................................
FD938296       --> CCAACAAACTCAACCGCATTCTTCAACTCACAGGATTCAGTGATCCGGTC
FD556575       --> CCAACAAACTCAACCGCATTCTTCAACTCACAGGATTCAGTGATCCGGTC
FD560160       --> CCAACAAACTCAACCGCATTCTTCAACTCACAGGATTCAGTGATCCGGTC
FD987458       --> CCAACAAACTCAACCGCATTCTTCAACTCACAGGATTCAGTGATCCGGTC
FD556606       --> CCAACAAACTCAACCGCATTCTTCAACTCACAGGATTCAGTGATCCGGTC
FD564681       --> CCAACAAACTCAACCGCATTCTTCAACTCACAGGATTCAGTGATCCGGTC
FD969846       --> ..................................................
FD577928       --> ..................................................
FD550448       --> ..................................................
EV526195       --> ..................................................
FD956560       --> ..................................................
FD551922       --> ..................................................

               501    -    551
UN05643        --> TATGCTGAAGCATACGTGACGGTCCATCACTATGACATTGCACTCGAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552850       <-- ..................................................
FD552875       <-- ..................................................
FD934710       <-- ..................................................
EV530736       <-- ..................................................
FD983513       <-- ..................................................
FD547764       <-- ..................................................
FD555763       <-- ..................................................
FD582151       <-- ..................................................
FD938296       --> TATGCTGAAGCATACGTGACGGTCCATCACTATGACATTGCACTCGAAGT
FD556575       --> TATGCTGAAGCATACGTGACGGTCCATCACTATGACATTGCACTCGAAGT
FD560160       --> TATGCTGAAGCATACGTGACGGTCCATCACTATGACATTGCACTCGAAGT
FD987458       --> TATGCTGAAGCATACGTGACGGTCCATCACTATGACATTGCACTCGAAGT
FD556606       --> TATGCTGAAGCATACGTGACGGTCCATCACTATGACATTGCACTCGAAGT
FD564681       --> TATGCTGAAGCATACGTGACGGTCCATCACTATGACATTGCACTCGAAGT
FD969846       --> ..................................................
FD577928       --> ..................................................
FD550448       --> ..................................................
EV526195       --> ..................................................
FD956560       --> ..................................................
FD551922       --> ..................................................

               551    -    601
UN05643        --> TACCGTTATCAACCGTACAAAGGAAACCCTTCAGAATATGTGCTTGGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552850       <-- ..................................................
FD552875       <-- ..................................................
FD934710       <-- ..................................................
EV530736       <-- ..................................................
FD983513       <-- ..................................................
FD547764       <-- ..................................................
FD555763       <-- ..................................................
FD582151       <-- ..................................................
FD938296       --> TACCGTTATCAACCGTACAAAGGAAACCCTTCAGAATATGTGCTTGGAGT
FD556575       --> TACCGTTATCAACCGTACAAAGGAAACCCTTCAGAATATGTGCTTGGAGT
FD560160       --> TACCGTTATCAACCGTACAAAGGAAACCCTTCAGAATATGTGCTTGGAGT
FD987458       --> TACCGTTATCAACCGTACAAAGGAAACCCTTCAGAATATGTGCTTGGAGT
FD556606       --> TACCGTTATCAACCGTACAAAGGAAACCCTTCAGAATATGTGCTTGGAGT
FD564681       --> TACCGTTATCAACCGTACAAAGGAAACCCTTCAGAATATGTGCTTGGAGT
FD969846       --> ............gCGTACAAAGGAAACCCTTCAGAATATGTGCTTGGAGC
FD577928       --> ..................................................
FD550448       --> ..................................................
EV526195       --> ..................................................
FD956560       --> ..................................................
FD551922       --> ..................................................

               601    -    651
UN05643        --> TAGCAACCATGGGTGATCTCAAGCTTGTTGAGCGTCCTCAAAACTATAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552850       <-- ...............ATCTCAAGCTTGTTGAGCGTCCTCAAAACTATAGT
FD552875       <-- ..................................................
FD934710       <-- ..................................................
EV530736       <-- ..................................................
FD983513       <-- ..................................................
FD547764       <-- ..................................................
FD555763       <-- ..................................................
FD582151       <-- ..................................................
FD938296       --> TAGCAACCATGGGTGATCTCAAGCTTGTTGAGCGTCCTCAAAACTATAGT
FD556575       --> TAGCAACCATGGGTGATCTCAAGCTTGTTGAGCGTCCTCAAAACTATAGT
FD560160       --> TAGCAACCATGGGTGATCTCAAGCTTGTTGAGCGTCCTCAAAACTATAGT
FD987458       --> TAGCAACCATGGGTGATCTCAAGCTTGTTGAGCGTCCTCAAAACTATAGT
FD556606       --> TAGCAACCATGGGTGATCTCAAGCTTGTTGAGCGTCCTCAAAACTATAGT
FD564681       --> TAGCAACCATGGGTGATCTCAAGCTTGTTGAGCGTCCTCAAAACTATAGT
FD969846       --> TAGCAACCATGGGTGATCTCAAGCTTGTTGAGCGTCCTCAAAACTATAGT
FD577928       --> ..................................................
FD550448       --> ..................................................
EV526195       --> ..................................................
FD956560       --> ..................................................
FD551922       --> ..................................................

               651    -    701
UN05643        --> CTGGCACCGGGAACGAGCATGCAGATAAAAGCAAACATAAAGGTCTCGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552850       <-- CTGGCACCGGGAACGAGCATGCAGATAAAAGCAAACATAAAGGTCTCGTC
FD552875       <-- ...............................................GTC
FD934710       <-- ..................................................
EV530736       <-- ..................................................
FD983513       <-- ..................................................
FD547764       <-- ..................................................
FD555763       <-- ..................................................
FD582151       <-- ..................................................
FD938296       --> CTGGCACCGGGAACGAGCATGCAGATAAAAGCAAACATAAAGGTCTCGTC
FD556575       --> CTGGCACCGGGAACGAGCATGCAGATAAAAGCAAACATAAAGGTCTCGTC
FD560160       --> CTGGCACCGGGAACGAGCATGCAGATAAAAGCAAACATAAAGGTCTCGTC
FD987458       --> CTGGCACCGGGAACGAGCATGCAGATAAAAGCAAACATAAAGGTCTCGTC
FD556606       --> CTGGCACCGGGAACGAGCATGCAGATAAAAGCAAACATAAAGGTCTCGTC
FD564681       --> CTGGCACCGGGAACGAGCATGCAGATAAAAGCAAACATAAAGGTCTCGTC
FD969846       --> CTGGCACCGGGAACGAGCATGCAGATAAAAGCAAACATAAAGGTCTCGTC
FD577928       --> .........GGAACGAGCATGCAGATAAAAGCAAACATAAAGGTCTCGTC
FD550448       --> ........................................AGGTCTCGTC
EV526195       --> ..................................................
FD956560       --> ..................................................
FD551922       --> ..................................................

               701    -    751
UN05643        --> CACAGAGACCGGAGTCATATTCGGAAACATCGTCTATGAGACATCAAACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552850       <-- CACAGAGACCGGAGTCATATTCGGAAACATCGTCTATGAGACATCAAACG
FD552875       <-- CACAGAGACCGGAGTCATATTCGGAAACATCGTCTATGAGACATCAAACG
FD934710       <-- ..................................................
EV530736       <-- ..................................................
FD983513       <-- ..................................................
FD547764       <-- ..................................................
FD555763       <-- ..................................................
FD582151       <-- ..................................................
FD938296       --> CACAGAGACCGGAGTCATATTCGGAA-CATCGTCTATGAGACATCAAACG
FD556575       --> CACAGAGACCGGAGTCATATTCGGAAACATCGTCTATGAGACATCAAACG
FD560160       --> CACAGAGACCGGAGTCATATTCGGGAACATCGTCTATGAGACGTCAAACG
FD987458       --> CACAGAGACCGGAGTCATATTCGGGAACATCGTCTATGAGACGTCAAACG
FD556606       --> CACAGAGACCGGAGTCATATTCGGAAACATCGTCTATGAGACATCAAACG
FD564681       --> CACAGAGACCGGAGTCATATTCGGAAACATCGTCTATGAGACATCAAACG
FD969846       --> CACAGAGACCGGAGTCATATTCGGAAACATCGTCTATGAGACATCAAACG
FD577928       --> CACAGAGACCGGAGTCATATTCGGAAACATCGTCTATGAGACATCAAACG
FD550448       --> CACAGAAACCGGAGTCATATTCGGAAACATCGTCTATGAGACATCAAACG
EV526195       --> ..................................................
FD956560       --> ..................................................
FD551922       --> ..................................................

               751    -    801
UN05643        --> TAATGGAGCGAAACGTCGTGGTTCTCAACGACATACACATTGATATCATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552850       <-- TAATGGAGCGAAACGTCGTGGTTCTCAACGACATACACATTGATATCATG
FD552875       <-- TAATGGAGCGAAACGTCGTGGTTCTCAACGACATACACATTGATATCATG
FD934710       <-- ............ACGTCGTGGTTCTCAACGACATACACATTGATATCATG
EV530736       <-- ........................gCAACGACATACACATTGATATCATG
FD983513       <-- ..................................................
FD547764       <-- ..................................................
FD555763       <-- ..................................................
FD582151       <-- ..................................................
FD938296       --> TAATGGAGCGAAACGTCGTGGTTCTCA-CGACATACACATTGATATCATG
FD556575       --> TAATGGAGCGAAACGTCGTGGTTCTCAACGACATACACATTGATATCATG
FD560160       --> TAATGGAGCGAAACGTCGTGGTTCTCAACGACATACACATTGATATCATG
FD987458       --> TAATGGAGCGAAACGTCGTGGTTCTCAACGACATACACATTGATATCATG
FD556606       --> TAATGGAGCGAAACGTCGTGGTTCTCAACGACATACACATTGATATCATG
FD564681       --> TAATGGAGCGAAACGTCGTGGTTCTCAACGACATACACATTGATATCATG
FD969846       --> TAATGGAGCGAAACGTCGTGGTTCTCAACGACATACACATTGATATCATG
FD577928       --> TAATGGAGCGAAACGTCGTGGTTCTCAACGACATACACATTGATATCATG
FD550448       --> TAATGGAGCGAAACGTCGTGGTTCTCAACGACATACACATTGATATCACG
EV526195       --> ........................gCAACGACATACACATTGATATCATG
FD956560       --> ..................................................
FD551922       --> ..................................................

               801    -    851
UN05643        --> GACTATATCTCCCCTGCTGTTTGCTCAGAGGTTGCTTTCAGAACCATGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552850       <-- GACTATATCTCCCCTGCTGTTTGCTCAGAGGTTGCTTTCAGAACCATGTG
FD552875       <-- GACTATATCTCCCCTGCTGTTTGCTCAGAGGTTGCTTTCAGAACCATGTG
FD934710       <-- GACTATATCTCCCCTGCTGTTTGCTCAGAGGTTGCTTTCAGAACCATGTG
EV530736       <-- GACTATATCTCCCCTGCTGTTTGCTCAGAGGTTGCTTTCAGAACCATGTG
FD983513       <-- .......................................AGAACCATGTG
FD547764       <-- ..................................................
FD555763       <-- ..................................................
FD582151       <-- ..................................................
FD938296       --> GACTATATCTCCC-TGCTGTTTGCTCAGAGGTgct...............
FD556575       --> GACTATATCTCCCCTGCTGTTTGCTCAGAG-TTGCTTTCAGAACCATGTG
FD560160       --> GACTATATCTCCCCTGCTGTTTGCTCAGAGGTTGCTTTCAGAACCATGTG
FD987458       --> GACTATATCTCCCCTGCTGTTTGCTCAGAGGTTGCTTTCAGAACCATGTG
FD556606       --> GACTATATCTCCCCTGCTGTTTGCTCAGAGGTTGCTTTCAGAACCATGTG
FD564681       --> GACTATATCTCCCCTGCTGTTTGCTCAGAGGTTGCTTTCAGAACCATGTG
FD969846       --> GACTATATCTCCCCTGCTGTTTGCTCAGAGGTTGCTTTCAGAACCATGTG
FD577928       --> GACTATATCTCCCCTGCTGTTTGCTCAGAGGTTGCTTTCAGAACCATGTG
FD550448       --> GACTATATCTCCCCTGCTGTTTGCTCAGAGGTTGCTTTCAGAACCATGTG
EV526195       --> GACTATATCTCCCCTGCTGTTTGCTCAGAGGTTGCTTTCAGAACCATGTG
FD956560       --> .....gATCTCCCCTGCTGTTTGCTCAGAGGTTGCTTTCAGAACCATGTG
FD551922       --> ..................................................

               851    -    901
UN05643        --> GGCAGAATTTGAATGGGAGAACAAGGTTGCTGTGAACACCACGATTCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552850       <-- GGCAGAGTTTGAATGGGAGAACAAGGTTGCTGTGAACACCACGATTCAGA
FD552875       <-- GGCAGAGTTTGAATGGGAGAACAAGGTTGCTGTGAACACCACGATTCAGA
FD934710       <-- GGCAGAATTTGAATGGGAGAACAAGGTTGCTGTGAACACCACGATTCAGA
EV530736       <-- GGCAGAATTTGAATGGGAGAACAAGGTTGCTGCGAACACCACGATTCAGA
FD983513       <-- GGCAGAATTTGAATGGGAGAACAAGGTTGCTGTGAACACCACGATTCAGA
FD547764       <-- ..................................................
FD555763       <-- ..................................................
FD582151       <-- ..................................................
FD938296       --> ..................................................
FD556575       --> GGCAGAGTTTGAATGGGAGAACAAGGT-GCTGTGA...............
FD560160       --> GGCAGAATTTGAATGGGAGAACAAGGTTGCTGTGAACACCACGATTCAGA
FD987458       --> GGCAGAATTTGAATGGGAGAACAAGGTTGCTGTGAACACCACGATTCAGA
FD556606       --> GGCAGAGTTTGAATGGGAGAACAAGGTTGCTGTGAACACCACGATTCAGA
FD564681       --> GGCAGAATTTGAATGGGAGAACAAGGTTGCTGTGAACACCACGATTCAGA
FD969846       --> GGCAGAGTTTGAATGGGAGAACAAGGTTGCTGTGAACACCACGATTCAGA
FD577928       --> GGCAGAATTTGAATGGGAGAACAAGGTTGCTGTGAACACCACGATTCAGA
FD550448       --> GGCAGAGTTTGAATGGGAGAACAAGGTTGCTGTGAACACCACGATTCAGA
EV526195       --> GGCAGAATTTGAATGGGAGAACAAGGTTGCTGCGAACACCACGATTCAGA
FD956560       --> GGCAGAATTTGAATGGGAGAACAAGGTTGCTGTGAACACCACGATTCAGA
FD551922       --> ..................................................

               901    -    951
UN05643        --> ACGAGAGAGAGTTCCTCGATCACATTATCAAATCCACAAACATGAAGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552850       <-- ACGAGAGAGAGTTCCTCGACCACATTATCAAATCCACAAACATGAAGTGT
FD552875       <-- ACGAGAGAGAGTTCCTCGACCACATTATCAAATCCACAAACATGAGGTGT
FD934710       <-- ACGAGAGAGAGTTCCTCGATCACATTATCAAATCCACAAACATGAAGTGT
EV530736       <-- ACGAGAGAGAGTTCCTCGATCACATTATCAAATCCACAAACATGAAGTGT
FD983513       <-- ACGAGAGAGAGTTCCTCGATCACATTATCAAATCCACAAACATGAAGTGT
FD547764       <-- .................................................g
FD555763       <-- ..................................................
FD582151       <-- ..................................................
FD938296       --> ..................................................
FD556575       --> ..................................................
FD560160       --> ACGAGAGAGAGTTCCTCGATCACATTATCAAATCCACAAACATGAAGTGT
FD987458       --> ACGAGAGAGAGTTCCTCGATCACATTATCAAATCCACAAACATGAAGTGT
FD556606       --> ACGAGAGAGAGTTCCTCGACCACATTATCAAATCCACAAACATGAGGTGT
FD564681       --> ACGAGAGAGAGTTCCTCGATCACATTATCAAATCCACAAACATGAAGTGT
FD969846       --> ACGAGAGAGAGTTCCTCGACCACATTATCAAATCCACAAACATGAAGTGT
FD577928       --> ACGAGAGAGAGTTCCTCGATCACATTATCAAATCCACAAACATGAAGTGT
FD550448       --> ACGAGAGAGAGTTCCTCGACCACATTATCAAATCCACAAACATGAAGTGT
EV526195       --> ACGAGAGAGAGTTCCTCGATCACATTATCAAATCCACAAACATGAAGTGT
FD956560       --> ACGAGAGAGAGTTCCTCGATCACATTATCAAATCCACAAACATGAAGTGT
FD551922       --> ..................................................

               951    -   1001
UN05643        --> CTCACTGCCCCATCTGCAATAGAA-GGAGAATGCGGGTTCCTTGCAGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552850       <-- CTCACTGCCCCATCTGCAATAGAA-GGAGAATGCGGGTTCCTTGCAGCAA  Raphanus raphanistrum subsp. landra
FD552875       <-- CTCACTGCCCCATCTGCAATAGAA-GGGGAATGCGGGTTCCTTGCAGCAA  Raphanus raphanistrum subsp. landra
FD934710       <-- CTCACTGCCCCATCTGCAATAGAA-GGAGAATGCGGTTTCCTTGCAGCAA  Raphanus sativus var. oleiformis
EV530736       <-- CTCACTGCCCCATCTGCAATAGAA-GGAGAATGCGGTTTCCTTGCAGCAA  Raphanus raphanistrum subsp. maritimus
FD983513       <-- CTCACTGCCCCATCTGCAATAGAA-GGAGAATGCGGTTTCCTTGCAGCAA  Raphanus raphanistrum subsp. landra
FD547764       <-- CTCACTGCCCCATTTGCAATAGAA-GGAGAATGCGGGTTCCTTGCAGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD555763       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD582151       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD938296       --> ..................................................  Raphanus sativus var. oleiformis
FD556575       --> ..................................................  Raphanus raphanistrum subsp. landra
FD560160       --> CTCACTGCCCCATCT...................................  Raphanus raphanistrum subsp. landra
FD987458       --> CTCACTGCCCCATCTGCAATAGAA-GGAGAATGCGGTTTCCTTGCAGCAA  Raphanus raphanistrum subsp. landra
FD556606       --> CTCACTGCCCCATCTGCAATAGAAAGGGGAATGCGGGTTCCTTGCAGCAA  Raphanus raphanistrum subsp. landra
FD564681       --> CTCACTGCCCCATCTGCAATAGAA-GGAGAATGCGGTTTCCTTGCAGCAA  Raphanus sativus var. oleiformis
FD969846       --> CTCACTGCCCCATCTGCAATAGAA-GGAGAATGCGGGTTCCTTGCAGCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD577928       --> CTCACTGCCCCATCTGCAATAGAA-GGAGAATGCGGGTTCCTTGCAGCAA  Raphanus sativus cv Rat-Tail Radish #3870
FD550448       --> CTCACTGCCCCATCTGCAATAGAA-GGAGAATGCGGGTTCCTTGCAGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV526195       --> CTCACTGCCCCATCTGCAATAGAA-GGAGAATGCGGTTTCCTTGCAGCAA  Raphanus raphanistrum subsp. maritimus
FD956560       --> CTCACTGCCCCATCTGCAATAGAA-GGAGAATGCGGGTTCCTTGCAGCAA  Raphanus sativus cv Rat-Tail Radish #3870
FD551922       --> ..................................GGGTTCCTTGCAGCAA  Raphanus raphanistrum subsp. raphanistrum (NY)

               1001   -   1051
UN05643        --> ACCTATATGCAAAGAGTGTGTTTGGTGAGGATGCTCTTGTGAACGTGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552850       <-- ACCTATATGCAAAGAGTGTGTTTGGTGAGGATGCTCTTGTGAACGTGAGT
FD552875       <-- ACCTATATGCAAAGAGTGTGTTTGGTGAGGATGCTCTTGTGAACGTGAGT
FD934710       <-- ACCTATATGCAAAGAGTGTGTTTGGTGAGGATGCTCTTGTGAACGTGAGT
EV530736       <-- ACCTATATGCAAAGAGTGTGTTTGGTGAGGATGCTCTTGTGAACGTGAGT
FD983513       <-- ACCTATATGCAAAGAGTGTGTTTGGTGAGGATGCTCTTGTGAACGTGAGT
FD547764       <-- ACCTATATGCAAAGAGTGTGTTTGGTGAGGATGCTCTTGTGAACGTGAGT
FD555763       <-- ..................................................
FD582151       <-- ..................................................
FD938296       --> ..................................................
FD556575       --> ..................................................
FD560160       --> ..................................................
FD987458       --> ACCTATATGCAAAGAGTGTGTTTGGTGAGGATGCTCTTGTGAACGTGAGT
FD556606       --> ACCTATATGCAAAGAGTGTGTTTGGTGAGGATGCTCTTGTGAACGT....
FD564681       --> ACCTATATGCAAAGAGTGTGTTTGGTGAGGATGCTCTTGTGAACGTGAGT
FD969846       --> ACTTATATGCAAAGAGTGTGTTTGGTGAGGATGCTCTTGTGAACGTGAGT
FD577928       --> ACCTATATGCAAAGAGTGTGTTTGGTGAGGATGCTCTTGTGAACGTGAGT
FD550448       --> ACCTATATGCAAAGAGTGTGTTTGGTGAGGATGCTCTTGTGAACGTGAGT
EV526195       --> ACCTATATGCAAAGAGTGTGTTTGGTGAGGATGCTCTTGTGAACGTGAGT
FD956560       --> ACCTATATGCAAAGAGTGTGTTTGGTGAGGATGCTCTTGTGAACGTGAGT
FD551922       --> ACCTATATGCAAAGAGTGTGTTTGGTGAGGATGCTCTTGTGAACGTGAGT

               1051   -   1101
UN05643        --> ATCGAGAAGCAAACTGATGGAGTATTGAGTGGGTACATAAGGATAAGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552850       <-- ATCGAGAAGCAAACTGATGGAGTATTGAGTGGGTACATAAGGATAAGGAG
FD552875       <-- ATCGAGAAGCAAACTGATGGAGTATTGAGTGGGTACATAAGGATAAGGAG
FD934710       <-- ATCGAGAAGCAAACTGATGGAGTATTGAGTGGGTACATAAGGATAAGGAG
EV530736       <-- ATCGAGAAGCAAACTGATGGAGTATTGAGTGGGTACATAAGGATAAGGAG
FD983513       <-- ATCGAGAAGCAAACTGATGGAGTATTGAGTGGGTACATAAGGATAAGGAG
FD547764       <-- ATCGAGAAGCAAACTGATGGAGTATTGAGTGGGTACATAAGGATAAGGAG
FD555763       <-- ......AAGCAAACTGATGGAGTATTGAGTGGGTACATAAGGATAAGGAG
FD582151       <-- ..................................................
FD938296       --> ..................................................
FD556575       --> ..................................................
FD560160       --> ..................................................
FD987458       --> ATCGAGAAGCAA-CTGATGGAGTATTGAGTGGGTA...............
FD556606       --> ..................................................
FD564681       --> ATCGAGAAGCAAACTGATGGAGTATTGAGTGGGTACAT............
FD969846       --> ATCGAGAAGCAAACTGATGGAGTATTGAGTGGGTACATAAGGATAAGGAG
FD577928       --> ATCGAGAAGCAAACTGATGGAGTATTGAGTGGGTACATAAGGATAAGGAG
FD550448       --> ATCGAGAAGCAAACTGATGGAGTATTGAGTGGGTACATAAGGATAAGGAG
EV526195       --> ATCGAGAAGCAAACTGATGGAGTATTGAGTGGGTACATAAGGATAAGGAG
FD956560       --> ATCGAGAAGCAAACTGATGGAGTATTGAGTGGGTACATAAGGATAAGGAG
FD551922       --> ATCGAGAAGCAAACTGATGGAGTATTGAGTGGGTACATAAGGATAAGGAG

               1101   -   1151
UN05643        --> CAAGACGCAAGGGATTGCTCTAAGTCTTGGGGACAAGATCACCCTCAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552850       <-- CAAGACGCAAGGGATTGCTTTAAGTCTTGGGGACAAGATCACCCTCAAAC
FD552875       <-- CAAGACGCAAGGGATTGCTCTAAGTCTTGGGGACAAGATCACCCTCAAAC
FD934710       <-- CAAGACGCAAGGGATTGCTCTAAGTCTTGGGGACAAGATCACCCTCAAAC
EV530736       <-- CAAGACGCAAGGGATTGCTCTAAGTCTTGGGGACAAGATCACCCTCAAAC
FD983513       <-- CAAGACGCAAGGGATTGCTCTAAGTCTTGGGGACAAGATCACCCTCAAAC
FD547764       <-- CAAGACGCAAGGGATTGCTTTAAGTCTTGGGGACAAGATCACCCTCAAAC
FD555763       <-- CAAGACGCAAGGGATTGCTCTAAGTCTTGGGGACAAGATCACCCTCAAAC
FD582151       <-- .....................AAGTCTTGGGGACAAGATCACCCTCAAAC
FD938296       --> ..................................................
FD556575       --> ..................................................
FD560160       --> ..................................................
FD987458       --> ..................................................
FD556606       --> ..................................................
FD564681       --> ..................................................
FD969846       --> CAAGACGCAAGGGATTGCTCTAAGTCTTGGGGACAAGATCACCCTCAAAC
FD577928       --> CAAGACGCAAGGGATTGCTCTAAGTCTTGGGGACAAGATCACCCTCAAAC
FD550448       --> CAAGACGCAAGGGATTGCTCTAAGTCTTGGGGACAAGATCACCCTCAAAC
EV526195       --> CAAGACGCAAGGGATTGCTCTAAGTCTTGGGGACAAGATCACCCTCAAAC
FD956560       --> CAAGACGCAAGGGATTGCCCTAAGTCTTGGGGACAAGATCACCCTCAAAC
FD551922       --> CAAGACGCAAGGGATTGCTCTAAGTCTTGGGGACAAGATCACCCTCAAAC

               1151   -   1201
UN05643        --> AGAAGGGTAGTAGCTGAGGCCTTGGATGGTGGCGCACAAGGTAACTTTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552850       <-- AGAAGGGTAGTAGCTGAGGCCTTGGATGGTGGCGCACAAGGTAACTTTCT
FD552875       <-- AGAAGGGTAGTAGCTGAGGCCTTGGATGGTGGCGCACAAGGTAACTTTCG
FD934710       <-- AGAAGGGTAGTAGCTGAGGCCTTGGATGGTGGCGCACAAGGTAACTTTCG
EV530736       <-- AGAAGGGTAGTAGCTGAGGCCTTGGATGGTGGCGCACAAGGTAACTTTCG
FD983513       <-- AGAAGGGTAGTAGCTGAGGCCTTGGATGGTGGCGCACAAGGTAACTTTCG
FD547764       <-- AGAAGGGTAGTAGCTGAGGCCTTGGATGGTGGCGCACAAGGTAACTTTCG
FD555763       <-- AGAAGGGTAGTAGCTGAGGCCTTGGATGGTGGCGCACAAGGTAACTTTCG
FD582151       <-- AGAAGGGTAGTAGCTGAGGCCTTGGATGGTGGCGCACAAGGTAACTTTCG
FD938296       --> ..................................................
FD556575       --> ..................................................
FD560160       --> ..................................................
FD987458       --> ..................................................
FD556606       --> ..................................................
FD564681       --> ..................................................
FD969846       --> AGAAGGGTAGTAGCTGAGGCtt............................
FD577928       --> AGAAGGGTAGTAGCTGAGGCCTTGGATGGTGGCGCACAAGGTAACTTTCG
FD550448       --> AGAAGGGTAGTAGCTGAGGCCTTGGATGGTGGCGCACAAGGTAACTTTCG
EV526195       --> AGAAGGGTAGTAGCTGAGGCCTTGGATGGTGGCGCACAAGGTAACTTTCG
FD956560       --> AGAAGGGTAGTAGCTGAGGCCTTGGATGGTGGCGCACAAGGTAACTTTCG
FD551922       --> AGAAGGGTAGTAGCTGAGGCCTTGGATGGTGGCGCACAAGGTAACTTTCG

               1201   -   1251
UN05643        --> TTTCTCTCTTGAGCAATTTTTATAGTTGGTTGAATCTGTTTACTATATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552850       <-- TTTCTTTCTTGAGCAATTTTTATAGTTGGTTGAATCTGTTTACTATATGG
FD552875       <-- TTTCTCTCTTGAGCAATTTTTATAGTTGGTTGAATCTGTTTACTATATGG
FD934710       <-- TTTCTCTCTTGAGCAATTTTTATAGTTGGTTGAATCTGTTTACTATATGG
EV530736       <-- TTTCTCTCTTGAGCAATTTTTATAGTTGGTTGAATCTGTTTACTATATGG
FD983513       <-- TTTCTCTCTTGAGCAATTTTTATAGTTGGTTGAATCTGTTTACTATATGG
FD547764       <-- TTTCTTTCTTGAGCAATTTTTATAGTTGGTTGAATCTGTTTACTATATGG
FD555763       <-- TTTCTCTCTTGAGCAATTTTTATAGTTGGTTGAATCTGTTTACTATATGG
FD582151       <-- TTTCTCTCTTGAGCAATTTTTATAGTTGGTTGAATCTGTTTACTATATGG
FD938296       --> ..................................................
FD556575       --> ..................................................
FD560160       --> ..................................................
FD987458       --> ..................................................
FD556606       --> ..................................................
FD564681       --> ..................................................
FD969846       --> ..................................................
FD577928       --> TTTCTCTCTTGAGCAATTTTTATAGTTGGTTGAATCTGTTTACTATATGG
FD550448       --> TTTCTCTCTTGAGCAATTTTTATAGTTGGTTGAATCTGTTTACTATATGG
EV526195       --> TTTCTCTCTTGAGCAATTTTTATAGTTGGTTGAATCTGTTTACTATATGG
FD956560       --> TTTCTCTCTTGAGCAATTTTTATAGTTGGTTGAATCTGTTTACTATATGG
FD551922       --> TTTCTCTCTTGAGCAATTTTTATAGTTGGTTGAATCTGTTTACTATATGG

               1251   -   1301
UN05643        --> AGTGGAGTGAGGGAGGCGTTTTAAGTATATGTAAAGACCAAACTGTTATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552850       <-- AGTGGAGTGAGGGAGGCGTTTTAAGTATATGTAAAGACCAAACTGTTATC  Raphanus raphanistrum subsp. landra
FD552875       <-- AGTGGAGTGAGGGAGGCGTTTTAAGTATATGTAAAGACCAAACTGTTATC  Raphanus raphanistrum subsp. landra
FD934710       <-- AGTGGAGTGAGGGAGGCGTTTTAAGTATATGTAAAGACCAAACTGTTATC  Raphanus sativus var. oleiformis
EV530736       <-- AGTGGAGTGAAGGAGGCGTTTTAAGTATATGTAAAGACCAAACTGTTATC  Raphanus raphanistrum subsp. maritimus
FD983513       <-- AGTGGAGTGAAGGAGGCGTTTTAAGTATATGTAAAGACCAAACTGTTATC  Raphanus raphanistrum subsp. landra
FD547764       <-- AGTGGAGTGAGGGAGGCGTTTTAAGTATATGTAAAGACCAAACTGTTATC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD555763       <-- AGTGGAGTGAAGGAGGCGTTTTAAGTATATGTAAAGACCAAACTGTTATC  Raphanus raphanistrum subsp. landra
FD582151       <-- AGTGGAGTGAGGGAGGCGTTTTAAGTATATGTAGAGACCAAACTGTTATC  Raphanus sativus cv Rat-Tail Radish #3870
FD938296       --> ..................................................  Raphanus sativus var. oleiformis
FD556575       --> ..................................................  Raphanus raphanistrum subsp. landra
FD560160       --> ..................................................  Raphanus raphanistrum subsp. landra
FD987458       --> ..................................................  Raphanus raphanistrum subsp. landra
FD556606       --> ..................................................  Raphanus raphanistrum subsp. landra
FD564681       --> ..................................................  Raphanus sativus var. oleiformis
FD969846       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD577928       --> AGTGGAGTGAGGGAGGCGTTTTAAGTATATGTAGAGACCAAACTGTTATC  Raphanus sativus cv Rat-Tail Radish #3870
FD550448       --> AGTGGA-TGAGGGAGGC.................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV526195       --> AGTGGAGTGAAGGAGGCGTTTTAAGTATATGTAAAGACCAAACTGTTATC  Raphanus raphanistrum subsp. maritimus
FD956560       --> AGTGGAGTGAGGGAGGCGTTTTAAGTATATGTAAAGACCAAACTGTTATC  Raphanus sativus cv Rat-Tail Radish #3870
FD551922       --> AGTGGAGTGAGGGAGGCGTTTTAAGTATATGTAAAGACCAAACTGTTATC  Raphanus raphanistrum subsp. raphanistrum (NY)

               1301   -   1351
UN05643        --> ATTCCTTAACCGGTTTATAGTTTCCGGTATGGTACCGATGGATTCTTCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552850       <-- ATTCCTTAACCGGTTTATAGTTTCCGGTATGGTACCGATGGATTCTTCCC
FD552875       <-- ATTCCTTAACCGGTTTATAGTTTCCGGTATGGTACCGATGGATTCTTCCC
FD934710       <-- ATTCCTTAACCGGTTTATAGTTTCCGGTATGGTACCGATGGATTCTTCCC
EV530736       <-- ATTCCTTAACCGGTTTATAGTTTCCGGTATGGTACCGATGGATTCTTCCC
FD983513       <-- ATTCCTTAACCGGTTTATAGTTTCCGGTATGGTACCGATGGATTCTTCCC
FD547764       <-- ATTCCTTAACCGGTTTATAGTTTCCGGTATGGTACCGATGGATTCTTCCC
FD555763       <-- ATTCCTTAACCGGTTTATAGTTTCCGGTATGGTACCGATGGATTCTTCCC
FD582151       <-- ATTCCTTAACCGGTTTATAGTTTCCGGTATGGTACCGATGGATTCTTCCC
FD938296       --> ..................................................
FD556575       --> ..................................................
FD560160       --> ..................................................
FD987458       --> ..................................................
FD556606       --> ..................................................
FD564681       --> ..................................................
FD969846       --> ..................................................
FD577928       --> ATTCCTTAACCGGTTTATAGTTTCCCGTATGGTACCGATGGATTCTTCCC
FD550448       --> ..................................................
EV526195       --> ATTCCTTAACCGGTTTATAGTTTCCGGTATGGTACCGATGGATTCTTCCC
FD956560       --> ATTCCTTAACCGGTTTATAGTTTCCGGTATGGTACCGATGGATTCTTCCC
FD551922       --> ATTCCTTAACCGGTTTATAGTTTCCGGTATGGTACCGATGGATTCTTCCC

               1351   -   1401
UN05643        --> CGTACGGCTGTGTGTTTTTCTCTTTCTTTTAATTAGTACCTGAAGATTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552850       <-- Cc................................................
FD552875       <-- CGTACGGCTGTGTGTTTTTCTCTTTCTTTTAATTAGTACCTGAAGATTTT
FD934710       <-- CGTACGGCTGTGTGTTTTTCTCTTTCTTTTAATTAGTACCTGAAGATTTT
EV530736       <-- CGTACGGCTGTGTGTTTTTCTCTTTCTTTTAATTAGTACCTGAAGATTTT
FD983513       <-- CGTACGGCTGTGTGTTTTTCTCTTTCTTTTAATTAGTACCTGAAGATTTT
FD547764       <-- CGTACGGCTGTGTGTTTTTTTCTTTTTTTTAATTACTACCTGAAGATTTT
FD555763       <-- CGTACGGCTGTGTGTTTTTCTCTTTCTTTTAATTAGTACCTGAAGATTTT
FD582151       <-- CGTACGGCTGTGTGTTTTTCTCTTTCTTTTAATTAGTACCTGAAGATTTT
FD938296       --> ..................................................
FD556575       --> ..................................................
FD560160       --> ..................................................
FD987458       --> ..................................................
FD556606       --> ..................................................
FD564681       --> ..................................................
FD969846       --> ..................................................
FD577928       --> CGTACG-CTGTGTGTTTT-CTCTTTCTTTTAAT-AGTACCTGAAGATTTT
FD550448       --> ..................................................
EV526195       --> CGTACGGCTGTGTGTTTTTCTCTTTCTTTTAATTAGTACCTGAAGATTTT
FD956560       --> CGTACGGCTGTGTGTTTTTCTCTTTCTTTTAATTAGTACCTGAAGATTTT
FD551922       --> CGTACGGCTGTGTGTTTTTCTCTTTCTTTTAATTACTACCTGAAGATTTT

               1401   -   1451
UN05643        --> GTTTTTATTTGTAATGCTTTTTTTCTTTCTATATTATCGTTTGTTGGGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552850       <-- ..................................................
FD552875       <-- GTTTTTATTTGTAATGCTTTTTTTCTTTCTATATTATCGTTTGTTGGGG.
FD934710       <-- GTTTTTATTTGTAATGCTTTTTTTCTTTCTATATTATCGTTTGTTGGGG.
EV530736       <-- GTTTTTATTTGTAATGCTTTTTTTCTTTCTATATTATCGTTTGTTGGG..
FD983513       <-- GTTTTTATTTGTAATGCTTTTTTTCTTTCTATATTATCGTTTGTTGGGGA
FD547764       <-- GTTTTTATTTGTAATGCTTTTTTTCTTTTTATATTATCGTTTGTTGGGGA
FD555763       <-- GTTTTTATTTGTAATGCTTTTTTTCTTTCTATATTATCGTTTGTTGGGGA
FD582151       <-- GTTTTTATTTGTAATGCTTTTTTTCTTTCTATATTATCGTTTGTTGGGGA
FD938296       --> ..................................................
FD556575       --> ..................................................
FD560160       --> ..................................................
FD987458       --> ..................................................
FD556606       --> ..................................................
FD564681       --> ..................................................
FD969846       --> ..................................................
FD577928       --> GTTTT-A-TTGT-ATGCTTTTTT-CTTTCTAT-TTATCGTTTGTTGGGGA
FD550448       --> ..................................................
EV526195       --> GTTTTTATTTGTAATGCTTTTTTTCTTTCTATATTATCGTTTGTTGGG..
FD956560       --> GTTTTTATTTGTAATGCTTTTTTTCTTTCTATATTATCGTTTGTTGGGGA
FD551922       --> GTTTTTATTTGTAATGCTTTTTTTCTTTCTATATTATCGTTTGTTGGGGA

               1451   -   1501
UN05643        --> GATTATAACTGTAATGATTCTCGTAAAATGCATAATTGATATACTACTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD552850       <-- ..................................................
FD552875       <-- ..................................................
FD934710       <-- ..................................................
EV530736       <-- ..................................................
FD983513       <-- GATTATAACTGTAATGATTCTCGTAAAATGCATAATTGAT..........
FD547764       <-- GATTATAACTGTAATGATTCTCGTAAAATGCATAATTGATAT........
FD555763       <-- GATTATAACTGTAATGATTCTCGTAAAATGCATAATTGAT..........
FD582151       <-- GATTATAACTGTAATGATTCCCGTAAAATGCATAATTGATATACTACTAG
FD938296       --> ..................................................
FD556575       --> ..................................................
FD560160       --> ..................................................
FD987458       --> ..................................................
FD556606       --> ..................................................
FD564681       --> ..................................................
FD969846       --> ..................................................
FD577928       --> GATTATAACTGTAtgatccc..............................
FD550448       --> ..................................................
EV526195       --> ..................................................
FD956560       --> G.................................................
FD551922       --> GATTATAACTGTAATGATTCTCGTAAAATGCATAATTGATAT........

               1501   -   1551
UN05643        --> GTCTTTGAATTTTC
                   ~~~~~~~~~~~~~~
FD552850       <-- ..............
FD552875       <-- ..............
FD934710       <-- ..............
EV530736       <-- ..............
FD983513       <-- ..............
FD547764       <-- ..............
FD555763       <-- ..............
FD582151       <-- GTCTTTGAATTTTC
FD938296       --> ..............
FD556575       --> ..............
FD560160       --> ..............
FD987458       --> ..............
FD556606       --> ..............
FD564681       --> ..............
FD969846       --> ..............
FD577928       --> ..............
FD550448       --> ..............
EV526195       --> ..............
FD956560       --> ..............
FD551922       --> ..............