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Alignment for radish unigene UN05723

               1      -     51
UN05723        --> TCTCTCCTCTCTACTCGCATTGTGATTCACGAAAACATGTCTCGTCTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761272       <-- ..................................................
EY919999       <-- ..................................................
FD974372       <-- ..................................................
EY919783       <-- ..................................................
EV574541       <-- ..................................................
FY431212       --> TCTCTCCTCTCTACTCGCATTGTGATTCACGAAAACATGTCTCGTCTTCT
EW726148       --> ..................................................
EW726182       --> ..................................................
FD978057       --> ..................................................

               51     -    101
UN05723        --> CAACACGTCATTCCTTCCTTCTTCCACTTGCAGAACCCGATCCTCCTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761272       <-- ..................................................
EY919999       <-- ..................................................
FD974372       <-- ..................................................
EY919783       <-- ..................................................
EV574541       <-- ..................................................
FY431212       --> CAACACGTCATTCCTTCCTTCTTCCACTTGCAGAACCCGATCCTCCTCCT
EW726148       --> ..................................................
EW726182       --> ..................................................
FD978057       --> ..................................................

               101    -    151
UN05723        --> CTCCTCATTTCCATGTTAACAAGCCACGAATCGTCACCGTCCGAGCGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761272       <-- ..................................................
EY919999       <-- ..................................................
FD974372       <-- ..................................................
EY919783       <-- ..................................................
EV574541       <-- ..................................................
FY431212       --> CTCCTCATTTCCATGTTAACAAGCCACGAATCGTCACCGTCCGAGCGAAG
EW726148       --> ..................................................
EW726182       --> ..................................................
FD978057       --> ..................................................

               151    -    201
UN05723        --> ATCCGAGAGATCTTCATGCCTGCTCTCAGCTCCACCATGACCGAAGGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761272       <-- ..................................................
EY919999       <-- ..................................................
FD974372       <-- ..................................................
EY919783       <-- ..................................................
EV574541       <-- ..................................................
FY431212       --> ATCCGAGAGATCTTCATGCCTGCTCTCAGCTCCACCATGACCGAAGGCAA
EW726148       --> ..................................................
EW726182       --> ..................................................
FD978057       --> ..................................................

               201    -    251
UN05723        --> AATAGTATCCTGGGTCAAATCCGAAGGCGACAAGCTCAACAAAGGAGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761272       <-- ..................................................
EY919999       <-- ..................................................
FD974372       <-- ..................................................
EY919783       <-- ..................................................
EV574541       <-- ..................................................
FY431212       --> AATAGTATCCTGGGTCAAATCCGAAGGCGACAAGCTCAACAAAGGAGAGA
EW726148       --> ..................................................
EW726182       --> ..................................................
FD978057       --> ..................................................

               251    -    301
UN05723        --> GCGTTGTGGTCGTCGAATCCGACAAGGCCGATATGGACGTCGAGACTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761272       <-- ..................................................
EY919999       <-- ..................................................
FD974372       <-- ..................................................
EY919783       <-- ..................................................
EV574541       <-- ..................................................
FY431212       --> GCGTTGTGGTCGTCGAATCCGACAAGGCCGATATGGACGTCGAGACTTTC
EW726148       --> ..................................................
EW726182       --> ..................................................
FD978057       --> ..................................................

               301    -    351
UN05723        --> TACGACGGTTATCTCGCCGCCATCATGGTCGAAGAAGGCGGTGTCGCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761272       <-- ..................................................
EY919999       <-- ..................................................
FD974372       <-- ..................................................
EY919783       <-- ..................................................
EV574541       <-- ..................................................
FY431212       --> TACGACGGTTATCTCGCCGCCATCATGGTCGAAGAAGGCGGTGTCGCTCC
EW726148       --> ..................................................
EW726182       --> ..................................................
FD978057       --> ..................................................

               351    -    401
UN05723        --> CGTCGGATCCGCCATTGCCTTGTTAGCTGAGACTCAGGATGAAATCGCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761272       <-- ..................................................
EY919999       <-- ..................................................
FD974372       <-- ..................................................
EY919783       <-- ..................................................
EV574541       <-- ..................................................
FY431212       --> CGTCGGATCCGCCATTGCCTTGTTAGCTGAGACTCAGGATGAAATCGCCG
EW726148       --> ..................................................
EW726182       --> ..................................................
FD978057       --> ..................................................

               401    -    451
UN05723        --> ACGCTAGGGCTAAAGCTTCCGGTGGTGGTGGTGGAGGAGCCACTTCTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761272       <-- ..................................................
EY919999       <-- ..................................................
FD974372       <-- ..................................................
EY919783       <-- ..................................................
EV574541       <-- ..................................................
FY431212       --> ACGCTAGGGCTAAAGCTTCCGGTGGTGGTGGTGGAGGAGCCACTTCTCCT
EW726148       --> ..................................................
EW726182       --> ..................................................
FD978057       --> ..................................................

               451    -    501
UN05723        --> CCTTCTCCACCTCCGGTTGTTGTTGTTGAAGACAAGGTTTCGGTTCCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761272       <-- ..................................................
EY919999       <-- ..................................................
FD974372       <-- ..................................................
EY919783       <-- ..................................................
EV574541       <-- ..................................................
FY431212       --> CCTTCTCCACCTCCGGTTGTTGTTGTTGAAGACAAGGTTTCGGTTCCTCC
EW726148       --> ..................................................
EW726182       --> ..................................................
FD978057       --> ..................................................

               501    -    551
UN05723        --> GTCGAAAGTCGTGTCTGTGTCTGCTTCTGCGGTGCATCCGGCGTCTGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761272       <-- ..................................................
EY919999       <-- ..................................................
FD974372       <-- ..................................................
EY919783       <-- ..................................................
EV574541       <-- ..................................................
FY431212       --> GTCGAAAGTCGTGTCTGTGTCTGCTTCTGCGGTGCATCCGGCGTCTGAAG
EW726148       --> .......................................ggattgtgatt
EW726182       --> .......................................ggattgtgatt
FD978057       --> ..................................................

               551    -    601
UN05723        --> GAGGGAAGAGAGTGGTGGCTTCTCCTTATGCGAAGAAGCTAGCCAAGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761272       <-- ..................................................
EY919999       <-- ..................................................
FD974372       <-- ..................................................
EY919783       <-- ..................................................
EV574541       <-- ..................................................
FY431212       --> GAGGGAAGAGAGTGGTGGCTTCTCCTTACGCGAAGAAGCTAGCCAAGGAG
EW726148       --> cacgaaaacatgtctcgtCTTCTCCTTATGCGAAGAAGCTAGCCAAGGAG
EW726182       --> cacgaaaacatgtctcgtCTTCTCCTTATGCGAAGAAGCTAGCCAAGGAG
FD978057       --> ..................................................

               601    -    651
UN05723        --> TTGAAAGTGGAGTTGGCTGGTTTAGTGGGAAGTGGGCCTATGGGAAGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761272       <-- ..................................................
EY919999       <-- ..................................................
FD974372       <-- ..................................................
EY919783       <-- ..................................................
EV574541       <-- ..................................................
FY431212       --> TTGAAAGTGGAGTTGGCTGGTTTAGTGGGAAGTGGGCCTATGGGAAGGAT
EW726148       --> TTGAAAGTGGAGTTGGCTGGTTTAGTGGGAAGTGGGCCTATGGGAAGGAT
EW726182       --> TTGAAAGTGGAGTTGGCTGGTTTAGTGGGAAGTGGGCCTATGGGAAGGAT
FD978057       --> ..................................................

               651    -    701
UN05723        --> TGTGGCTAAAGATGTTGAAGCCGCTGTAGCTTCTGCTGCTGCTCCACCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761272       <-- ..................................................
EY919999       <-- ..................................................
FD974372       <-- ..................................................
EY919783       <-- ..................................................
EV574541       <-- ..................................................
FY431212       --> TGTGGCTAAAGATGTTGAAGCCGCTGTAGCTTCTGCTGCTGCTCCACCTG
EW726148       --> TGTGGCTAAAGATGTTGAAGCCGCTGTAGCTTCTGCTGCTGCTCCACCTG
EW726182       --> TGTGGCTAAAGATGTTGAAGCCGCTGTAGCTTCTGCTGCTGCTCCACCTG
FD978057       --> ..................................................

               701    -    751
UN05723        --> TTAAAACTGAGGCTATGACTCCTACTGCTGGTGTTGAGCTCGGCTCCGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761272       <-- ..................................................
EY919999       <-- ..................................................
FD974372       <-- ..................................................
EY919783       <-- ..................................................
EV574541       <-- ..................................................
FY431212       --> TTAAAACTGAGGCTATGACTCCTACTGCTGGTGTTGAGCTCGGCTCCGTG
EW726148       --> TTAAAACTGAGGCTATGACTCCTACTGCTGGTGTTGAGCTCGGCTCCGTG
EW726182       --> TTAAAACTGAGGCTATGACTCCTACTGCTGGTGTTGAGCTCGGCTCCGTG
FD978057       --> ..................................................

               751    -    801
UN05723        --> GTTCCATTCACGACAATGCAAGGCGCTGTGAGCAGAAACATGCTTGACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761272       <-- ..................................................
EY919999       <-- ..................................................
FD974372       <-- ..................................................
EY919783       <-- ..................................................
EV574541       <-- ..................................................
FY431212       --> GTTCCATTCACCACAATGCAAGGCGCCGTGAGCAGGAACATGCTTGACAG
EW726148       --> GTTCCATTCACGACAATGCAAGGCGCTGTGAGCAGAAACATGCTTGACAG
EW726182       --> GTTCCATTCACGACAATGCAAGGCGCTGTGAGCAGAAACATGCTTGACAG
FD978057       --> ..................................................

               801    -    851
UN05723        --> CTTGTCCGTTCCTACTTTTAGAGTCGGATACACTATCAACACCGATGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761272       <-- ...............TTTTAGAGTCGGATACACTATCAACACCGATGCTC
EY919999       <-- ...............................ACTTTCAACACCGATGCTC
FD974372       <-- ..................................................
EY919783       <-- ..................................................
EV574541       <-- ..................................................
FY431212       --> CTTGTCCGTTCCTACTTTTAGAGTCGGATACACTATCAACACCGATGCTC
EW726148       --> CTTGTCCGTTCCTACTTTTAGAGTCGGATACACTATCAACACCGATGCTC
EW726182       --> CTTGTCCGTTCCTACTTTTAGAGTCGGATACACTATCAACACCGATGCTC
FD978057       --> ..................................................

               851    -    901
UN05723        --> TTGATGCTCTCTACAAGAAGATTAAGTCGAAAGGAGTGACAATGACGGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761272       <-- TTGATGCTCTCTACAAGAAGATTAAATCGAAAGGAGTGACAATGACGGCA
EY919999       <-- TTGATGCTCTCTACAAGAAGATTAAGTCGAAAGGAGTGACAATGACGGCA
FD974372       <-- .......................................gAATGACGGCA
EY919783       <-- ..................................................
EV574541       <-- ..................................................
FY431212       --> TTGATGCTCTCTA.....................................
EW726148       --> TTGATGCTCTCTACAAGAAGATTAAGTCGAAAGGAGTGACAATGACGGCA
EW726182       --> TTGATGCTCTCTACAAGAAGATTAAGTCGAAAGGAGTGACAATGACGGCA
FD978057       --> .......................................gAATGACGGCA

               901    -    951
UN05723        --> CTACTAGCAAAGGCAACTGCTCTTGCACTCGCGAAACATCCTGTTGTTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761272       <-- CTACTAGCAAAGGCAACTGCTCTTGCACTCGCGAAACATCCCGTTGTTAA
EY919999       <-- CTACTAACAAAGGCAACTGCTCTTGCACTCGCGAAACATCCCGTTGTTAA
FD974372       <-- CTACTAGCAAAGGCAACTGCTCTTGCACTCGCGAAACATCCTGTTGTTAA
EY919783       <-- ..................................................
EV574541       <-- ..................................................
FY431212       --> ..................................................
EW726148       --> CTACTAGCAAAGGCAACTGCTCTTGCACTCGCGAAACATCCTGTTGTTAA
EW726182       --> CTACTAGCAAAGGCAACTGCTCTTGCACTCGCGAAACATCCTGTTGTTAA
FD978057       --> CTACTAGCAAAGGCAACTGCTCTTGCACTCGCGAAACATCCTGTTGTTAA

               951    -   1001
UN05723        --> TTCTTCCTGCAGAGATGGTAACAGTTTTGTGTATAACGCTAGCATCAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761272       <-- CTCTTCATGCAGAGATGGTAACAGTTTTGTGTATAACGCTAGCATCAACA
EY919999       <-- TTCTTCCTGCAGAGATGGTAACAGTTTTGTGTATAACGCTAGCATCAACA
FD974372       <-- TTCTTC-TGCAGAGATGGTAACAGTTTTGTGTATAACGCTAGCATCAACA
EY919783       <-- ....TCCTGCAGAGATGGTAACAGTTTTGTGTATAACGCTAGCATCAACA
EV574541       <-- ..................................................
FY431212       --> ..................................................
EW726148       --> TTCTTCCTGCAGAGATGGTAACAGTTTTGTGTATAACGCTAGCATCAACA
EW726182       --> TTCTTCCTGCAGAGATGGTAACAGTTTTGTGTATAACGCTAGCATCAACA
FD978057       --> TTCTTC-TGCAGAGATGGTAACAGTTTTGTGTATAACGCTAGCATCAACA

               1001   -   1051
UN05723        --> TTGCTGTTGCCGTCGCTATTGATGGTGGTTTGATCACTCCTGTGCTTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761272       <-- TCGCTGTTGCCGTCGCTATTGATGGTGGTTTGATCACTCCTGTGCTTCAG
EY919999       <-- TTGCTGTTGCCGTCGCTATTGATGGTGGTTTGATCACTCCTGTGCTTCAG
FD974372       <-- TTGCTGTTGCCGTCGCTATTGATGGTGGTTTGATCACTCCTGTGCTTCAG
EY919783       <-- TTGCTGTTGCCGTCGCTATTGATGGTGGTTTGATCACTCCTGTGCTTCAG
EV574541       <-- ................................................AG
FY431212       --> ..................................................
EW726148       --> TTGCTGTTGCCGTCGCTATTGATGGTGGTTTGATCACTCCTGTGCTTCAG
EW726182       --> TTGCTGTTGCCGTCGCTATTGATGGTGGTTTGATCACTCCTGTGCTTCAG
FD978057       --> TTGCTGTTGCCGTCGCTATTGATGGTGGTTTGATCACTCCTGTGCTTCAG

               1051   -   1101
UN05723        --> AACGCCGATAAGGTTGACATTTATTCATTGTCTAGAAAATGGAAAGAATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761272       <-- AACGCCGATAAGGTTGACATTTATTCATTGTCTAGAAAATGGAAAGAATT
EY919999       <-- AACGCCGATAAGGTTGACATTTATTCATTGTCTAGAAAATGGAAAGAATT
FD974372       <-- AACGCCGATAAGGTTGACATTTATTCATTGTCTAGAAAATGGAAAGAATT
EY919783       <-- AACGCCGATAAGGTTGACATTTATTCATTGTCTAGAAAATGGAAAGAATT
EV574541       <-- AACGCCGATAAGGTTGACATTTATTCATTATCTAGAAAATGGAAAGAATT
FY431212       --> ..................................................
EW726148       --> AACGCCGATAAGGTTGACATTTATTCATTGTCTAGAAAATGGAAAGAATT
EW726182       --> AACGCCGATAAGGTTGACATTTATTCATTGTCTAGAAAATGGAAAGAATT
FD978057       --> AACGCCGATAAGGTTGACATTTATTCATTGTCTAGAAAATGGAAAGAATT

               1101   -   1151
UN05723        --> GGTTGATAAGGCCCGAGCTAAGCAGCTGCAGCCTCAGGAGTACAACACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761272       <-- GGTTGATAAGGCCCGAGCTAAGCAACTGCAGCCTCAGGAGTACAACACTG
EY919999       <-- GGTTGATAAGGCCCGAGCTAAGCAGCTGCAGCCTCAGGAGTACAACACTG
FD974372       <-- GGTTGATAAGGCCCGAGCTAAGCAGCTGCAGCCTCAGGAGTACAACACTG
EY919783       <-- GGTTGATAAGGCCCGAGCTAAGCAGCTGCAGCCTCAGGAGTACAACACTG
EV574541       <-- GGTTGATAAGGCCCGAGCTAAGCAGCTGCAGCCTCAGGAGTACAACACTG
FY431212       --> ..................................................
EW726148       --> GGTTGATAAGGCCCGAGCTAAGCAGCTGCAGCCTCAGGAGTACAACACTG
EW726182       --> GGTTGATAAGGCCCGAGCTAAGCAGCTGCAGCCTCAG-AGTACAACACTG
FD978057       --> GGTTGATAAGGCCCGAGCTAAGCAGCTGCAGCCTCAGGAGTACAACACTG

               1151   -   1201
UN05723        --> GTACTTTCACTCTCTCTAACCTCGGAATGTTTGGTGTTGATCGGTTTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761272       <-- GTACTTTCACTCTCTCTAACCTCGGAATGTTTGGTGTTGATCGGTTTGAT
EY919999       <-- GTACTTTCACTCTCTCTAACCTCGGAATGTTTGGTGTTGATCGGTTTGAT
FD974372       <-- GTACTTTCACTCTCTCTAACCTCGGAATGTTTGGTGTTGATCGGTTTGAT
EY919783       <-- GTACTTTCACTCTCTCTAACCTCGGAATGTTTGGTGTTGATCGGTTTGAT
EV574541       <-- GTACTTTCACTCTCTCTAACCTTGGAATGTTTGGTGTTGATCGGTTTGAT
FY431212       --> ..................................................
EW726148       --> GTACTTTCACTCTCTCTAACCTCGGAATGTTTGGTGTTGATCGGTTTGAT
EW726182       --> GTACTTTCACTCTCTCTAACCTCGGAATGTTTGGTGTTGATCGGTTTGAT
FD978057       --> GTACTTTCACTCTCTCTAACCTCGGAATGTTTGGTGTTGATCGGTTTGAT

               1201   -   1251
UN05723        --> GCAATTCTTCCCCCTGGAACTGGAGCGATTATGGCTGTAGGAGCATCGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761272       <-- GCAATTCTTCCCCCTGGAACTGGAGCGATTATGGCTGTAGGAGCATCGCA
EY919999       <-- GCAATTCTTCCCCCTGGAACTGGAGCGATTATGGCTGTAGGAGCATCGCA
FD974372       <-- GCAATTCTTCCCCCTGGAACTGGAGCGATTATGGCTGTAGGAGCATCGCA
EY919783       <-- GCAATTCTTCCCCCTGGAACTGGAGCGATTATGGCTGTAGGAGCATCGCA
EV574541       <-- GCAATTCTTCCCCCTGGAACTGGAGCGATTATGGCTGTAGGAGCATCGCA
FY431212       --> ..................................................
EW726148       --> GCAATTCTTCCCCCTGGAACTGGAGCGATTATGGCTGTAGGAGCATCGCA
EW726182       --> GCAATTCTTCCCCCTGGAACTGGAGCGATTATGGCTGTAG-AGCATCGCA
FD978057       --> GCAATTCTTCCCCCTGGAACTGGAGCGATTATGGCTGTAGGAGCATCGCA

               1251   -   1301
UN05723        --> ACCTACAGTGGTTGCTACTAAAGACGGCCGCATTGGCATGAAAAACCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761272       <-- ACCTACAGTGGTTGCTGCTAAAGACGGCCGCATTGGCATGAAAAACCAGA
EY919999       <-- ACCTACAGTGGTTGCTACTAAAGACGGCCGCATTGGCATGAAAAACCAGA
FD974372       <-- ACCTACAGTGGTTGCTACTAAAGACGGCCGCATTGGCATGAAAAACCAGA
EY919783       <-- ACCTACAGTGGTTGCTACTAAAGACGGCCGCATTGGCATGAAAAACCAGA
EV574541       <-- ACCTACAGTGGTTGCTACTAAAGACGGCCGCATTGGCATG..........
FY431212       --> ..................................................
EW726148       --> c.................................................
EW726182       --> ACCTAC-GTGGTTGCTACTAAAGACG-CCGCAT-GGCATGAAAA--CAGA
FD978057       --> ACCTACAGTGGTTGCTACTAAAGACGGCCGCATTGGCATGAAAAACCAGA

               1301   -   1351
UN05723        --> TGCAGGTGAATGTGACTGCAGATCATCGTGTTATCTATGGTGCTGATCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761272       <-- TGCAGGTGAATGTGACGGCAGATCATCGTGTTATCTATGGTGCTGATCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY919999       <-- TGCAGGTGAATGTGACTGCAGATCATCGTGTTATCTATGGTGCTGATCTC  Raphanus raphanistrum subsp. landra
FD974372       <-- TGCAGGTGAATGTGACGGCAGATCATCGTGTTATCTATGGTGCTGATCTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY919783       <-- TGCAGGTGAATGTGACTGCAGATCATCGTGTTATCTATGGTGCTGATCTC  Raphanus raphanistrum subsp. landra
EV574541       <-- ..................................................  Raphanus raphanistrum subsp. landra
FY431212       --> ..................................................  Raphanus sativus cv GSK3-1
EW726148       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW726182       --> TGCAG-TG-ATGTGACTGCAGATCATCGTGTatc................  Raphanus sativus cv Early Scarlet Globe
FD978057       --> TGCAGGTGAATGTGACGGCAGATCATCGTGTTATCTATGGTGCTGATCTC  Raphanus raphanistrum subsp. raphanistrum (NY)

               1351   -   1401
UN05723        --> GCACAGTTCTTGCAAACATTGGCCAGCATTATTGAGGACCCAAAGGACCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761272       <-- GCACAGTTCTTGCAAACATTGGCCAGCATTATTGAGGACCCAAAGGACCT
EY919999       <-- GCACAGTTCTTGCAAACATTGGCCAGCATTATTGAGGACCCAAAGGACCT
FD974372       <-- GCACAGTTCTTGCAAACATTGGCCAGCATTATTGAGGACCCAAAGGACCT
EY919783       <-- GCACAGTTCTTGCAAACATTGGCCAGCATTATTGAGGACCCAAAGGACCT
EV574541       <-- ..................................................
FY431212       --> ..................................................
EW726148       --> ..................................................
EW726182       --> ..................................................
FD978057       --> GCACAGTTCTTGCAAACATTGGCCAGCATTATTGAGGACCCAAAGGACCT

               1401   -   1451
UN05723        --> TACTTTTTAGGCCAAATTACTGCTTTTTTTGCAACCCAATCTTCTCTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761272       <-- TACTTTTTAGGCCAAATTACTGCTTTTTTTGCAACCCAATCTTCTCTGCT
EY919999       <-- TACTTTTTAGGCCAAATTACTGCTTTTTTTGCAACCCAATCTTTTCTGCT
FD974372       <-- TACTTTTTAGGCCAAATTACTGCCTTTTTTGCAACCCAATCTTTTCTGCT
EY919783       <-- TACTTTTTAGGCCAAATTACTGCTTTTTTTGCAACCCAATCTTCTCTGCT
EV574541       <-- ..................................................
FY431212       --> ..................................................
EW726148       --> ..................................................
EW726182       --> ..................................................
FD978057       --> TACTTTCTAGGCCAAATTACTGCCTTTTTTGCAACCCAATCTTCTCTGCT

               1451   -   1501
UN05723        --> TTTTGATTCCATGGGAGCTTTGTATTTCTGCCGTAATCAGTTTCGTTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761272       <-- TTTTGATTCCATGGGAGCTATGTATTTCTTCCGTAATCAGTTTCGTTGAT
EY919999       <-- TTTTGATTCCATGGGAGCTTTGTATTTCTGCCGTAATCAGTTTCGTTGAT
FD974372       <-- TTTTGATTCCCTTGGAGCTTTGTATTTCTGCCGTAATCAGTTTCGTTGAT
EY919783       <-- TTTTGATTCCATGGGAGCTTTGTATTTCTGCCGTAATCAGTTTCGTTGAT
EV574541       <-- ..................................................
FY431212       --> ..................................................
EW726148       --> ..................................................
EW726182       --> ..................................................
FD978057       --> TTTTGATTCCCTTGGAGCTTTGTATTTCTGCCGTAATCAGTTTCGTTGAT

               1501   -   1551
UN05723        --> AGAATCGACTCTTTTCCTTTAAAAAAAAGTAATGTTGAACATACTCATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761272       <-- AGAATCGACTCTTTT--CTT-AAAAGGAGTAATGTTG.............
EY919999       <-- AGAATCGACTCTTTTCCTTTAAAAAAAAGTAATGTTGAACATACTCATTT
FD974372       <-- AGAATCGACTCTTTTCCTTTAAAAAAAAGTAATGTTGAACATACTCATTT
EY919783       <-- AGAATCGACTCTTTTCCTTTAAAAAAAAGTAATGTTGAACATACTCATTT
EV574541       <-- ..................................................
FY431212       --> ..................................................
EW726148       --> ..................................................
EW726182       --> ..................................................
FD978057       --> AGAATCG...........................................

               1551   -   1601
UN05723        --> GTTTGTTTGATATATCTCCTGCAACATTTGGCACATTGAAAGGCCTTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761272       <-- ..................................................
EY919999       <-- GTTTGTTTGATATATCTCCTGCAACATTTGGCACATTGAAAGGCCTTCTC
FD974372       <-- GTTTGTTTGAGATATCTCCTGCAACATTTGGCACATTGAAAGGCCTTCT.
EY919783       <-- GTTTGTTTGATATATCTCCTGCAACATTTGGCACATTGAAAGGCCTTCTC
EV574541       <-- ..................................................
FY431212       --> ..................................................
EW726148       --> ..................................................
EW726182       --> ..................................................
FD978057       --> ..................................................

               1601   -   1651
UN05723        --> ATATGATTTTGTTGCAGAGTTTTTCATAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761272       <-- .............................
EY919999       <-- ATATGATTTTGTTGCAGAGTTTTTCATAC
FD974372       <-- .............................
EY919783       <-- ATATGATTTTGTTGCAGAGTTTTTCATAC
EV574541       <-- .............................
FY431212       --> .............................
EW726148       --> .............................
EW726182       --> .............................
FD978057       --> .............................