1      -     51
UN06095        --> GGGATCTCACAAACAAAAACACAACACACACAAACAAAGCTGTGAAGATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728501       <-- GGGATCTCACAAACAAAAACACAACACACACAAACAAAGCTGTGAAGATA
EW736393       <-- .GGATCTCACAAACAAAAACACAACGCACACAAACAAAGCTGTGAAGATA
EX760534       <-- .GGATCTCACAATCAAAAACACAACACACACAAACAAAGCTGTGAAGATA
EY928999       <-- .GGATCTCACAAACAAAAACACAACACACACAAACAAAGCTGTGAAGATA
FD975131       <-- .GGATCTCACAAACAAAAACACAACACACACAAACAAAGCTGTGAAGATA
FD984881       <-- .GGATCTCACAAACAAAAACACAACACACACAAACAAGGCTGTGAAGATA
EW729955       <-- .........CAAACAAAAACACAACACACACAAACAAAGCTGTGAAGATA
EY910318       <-- ...........................................GAAGATA
FD552391       <-- ..................................................
EW724016       --> GGGATCTCACAAACAAAAACACAACACACACAAACAAAGCTGTGAAGATA
EV548377       --> .GGATCTCACAAACAAAAACACAACACACACAAACAAAGCTGTGAAGATA
EW725305       --> .GGATCTCACAAACAAAAACACAACACACACAAACAAAGCTGTGAAGATA
EW731751       --> .GGATCTCACAAACAAAAACACAACGCACACAAACAAAGCTGTGAAGATA
EX756804       --> .GGATCTCACAATCAAAAACACAACACACACAAACAAAGCTGTGAAGATA
EY933558       --> .GGATCTCACAAACAAAAACACAACACACACAAACAAAGCTGTGAAGATA
FD947659       --> .GGATCCCACAAACAAAAACACAACACACACAAACAAAGCTGTGAAGATA
FD978989       --> .GGATCTCACAAACAAAAACACAACACACACAAACAAAGCTGTGAAGATA
FD989050       --> .GGATCTCACAAACAAAAACACAACACACACAAACAAGGCTGTGAAGATA
EY914234       --> ......ggACAAACAAAAACACAACACACACAAACAAAGCTGTGAAGATA
FD556017       --> ......ggACAAACAAAAACACAACACACACAAACAAAGCTGTGAAGATA
EV525077       --> ..................................................
EX756256       --> ..................................................

               51     -    101
UN06095        --> TATCAATAGACAAAACAAATCACATCAAATATCAACCTGAAGCCAAAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728501       <-- TATCAATAGACAAAACAAATCACATCAAATATCAACCTGAAGCCAAAGGA
EW736393       <-- TATCAATAGACAAAACAAATCACATCAAATATCAACCTGAAGCCAAAGGA
EX760534       <-- TATCAATAGACAAAACAAATCACATCAAATATCAACCTGAAGCCAAAGGA
EY928999       <-- TATCAATAGACAAAACAAATCACATCAACTATCAACCTGAAGCCAAAGGA
FD975131       <-- TATCAATAGACAAAACAAATCACATCAAATATCAACCTGAAGCCAAAGGA
FD984881       <-- TATCAATAGACAAAACAAATCACATCAAATATCAACCTGAAGCCAAAGGA
EW729955       <-- TATCAATAGACAAAACAAATCACATCAAATATCAACC-GAAGCCAAAGGA
EY910318       <-- TATCAATAGACAAAACAAATCACATCAAATATCAACCTGAAGCCAAAGGA
FD552391       <-- ..................................................
EW724016       --> TATCAATAGACAAAACAAATCACATCAAATATCAACCTGAAGCCAAAGGA
EV548377       --> TATCAATAGACAAAACAAATCACATCAACTATCAACCTGAAGCCAAAGGA
EW725305       --> TATCAATAGACAAAACAAATCACATCAAATATCAACCTGAAGCCAAAGGA
EW731751       --> TATCAATAGACAAAACAAATCACATCAAATATCAACCTGAAGCCAAAGGA
EX756804       --> TATCAATAGACAAAACAAATCACATCAAATATCAACCTGAAGCCAAAGGA
EY933558       --> TATCAATAGACAAAACAAATCACATCAACTATCAACCTGAAGCCAAAGGA
FD947659       --> TATCAATAGACAAAACAAATCACATCAAATATC---CTGAAGCCAAAGGA
FD978989       --> TATCAATAGACAAAACAAATCACATCAAATATCAACCTGAAGCCAAAGGA
FD989050       --> TATCAATAGACAAAACAAATCACATCAAATATCAACCTGAAGCCAAAGGA
EY914234       --> TATCAATAGACAAAACAAATCACATCAAATATCAACCTGAAGCCAAAGGA
FD556017       --> TATCAATAGACAAAACAAATCACATCAAATATCAACCTGAAGCCAAAGGA
EV525077       --> ..................................................
EX756256       --> ..................................................

               101    -    151
UN06095        --> -AAAGGAAAAGATAACAAAAGTGAGAAGCAATGTCAAAAGTTTCCCTTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728501       <-- -AAAGGAAAAGATAACAAAAGTGAGAAGCAATGTCAAAAGTTTCCCTTAT
EW736393       <-- -AAAGGAAAAGATAACAAAAGTGAGAAGCAATGTCAAAAGTTTCCCTTAT
EX760534       <-- TCAAGGAAAAGATAACAAAAGTGAGAAGCAATGTCAAAAGTTTCCCTTAT
EY928999       <-- -AAAGGAAAAGATAACAAAAGTGAGAAGCAATGTCAAAAGTTTCCCTTAT
FD975131       <-- -AAAGGAAAAGATAACAAAAGTGAGAAGCAATGTCAAAAGTTTCCCTTAT
FD984881       <-- -AAAGGAAAAGATAACAAAAGTGAGAAGCAATGTCAAAAGTTTCCCTTAT
EW729955       <-- -AAAGGAAAAGATAACAAAAGTGAGAAGCAATGTCAAAAGTTTCCCTTAT
EY910318       <-- -AAAGGAAAAGATAACAAAAGTGAGAAGCAATGTCAAAAGTTTCCCTTAT
FD552391       <-- ..................................................
EW724016       --> -AAAGGAAAAGATAACAAAAGTGAGAAGCAATGTCAAAAGTTTCCCTTAT
EV548377       --> -AAAGGAAAAGATAACAAAAGTGAGAAGTAATGTCAAAAGTTTCCCTTAT
EW725305       --> -AAAGGAAAAGATAACAAAAGTGAGAAGCAATGTCAAAAGTTTCCCTTAT
EW731751       --> -AAAGGAAAAGATAACAAAAGTGAGAAGCAATGTCAAAAGTTTCCCTTAT
EX756804       --> TCAAGGAAAAGATAACAAAAGTGAGAAGCAATGTCAAAAGTTTCCCTTAT
EY933558       --> -AAAGGAAAAGATAACAAAAGTGAGAAGCAATGTCAAAAGTTTCCCTTAT
FD947659       --> -AAAGGAAAAGATGACAAAAGTGAGAAGCAATGTCAAAAGTTTCCCTTAT
FD978989       --> -AAAGGAAAAGATAACAAAAGTGAGAAGCAATGTCAAAAGTTTCCCTTAT
FD989050       --> -AAAGGAAAAGATAACAAAAGTGAGAAGCAATGTCAAAAGTTTCCCTTAT
EY914234       --> -AAAGGAAAAGATAACAAAAGTGAGAAGCAATGTCAAAAGTTTCCCTTAT
FD556017       --> -AAAGGAAAAGATAACAAAAGTGAGAAGCAATGTCAAAAGTTTCCCTTAT
EV525077       --> ..................................................
EX756256       --> ..................................................

               151    -    201
UN06095        --> TAGATTGTCATTGTTTGGGTTCCTGGTGATCGCTGTCGTCACTCCATTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728501       <-- TAGATTGTCATTGTTTGGGTTCCTGGTGATCGCTGTCGTCACTCCATTGG
EW736393       <-- TAGATTGTCATTGTTTGGGTTCCTGGTGATCGCTGTCGTCACTCCATTGG
EX760534       <-- TAGATTGTCACTGTTTGGGTTCCTGGTGATCGCTGTCGTCACTCCATTGG
EY928999       <-- TAGATTGTCATTGTTTGGGTTCCTGGTGATCGCTGTCGTCACTTCATTGG
FD975131       <-- TAGATTGTCATTGTTTGGGTTCCTGGTGATCGCTGTCGTCACTCCATTGG
FD984881       <-- TAGATTGTCATTGTTTGGGTTCCTGGTGATCGCTGTCGTCACCCCATTGG
EW729955       <-- TAGATTGTCATTGTTTGGGTTCCTGGTGATCGCTGTCGTCACTCCATTGG
EY910318       <-- TAGATTGTCATTGTTTGGGTTCCTGGTGATCGCTGTCGTCACTCCATTGG
FD552391       <-- ..................................................
EW724016       --> TAGATTGTCATTGTTTGGGTTCCTGGTGATCGCTGTCGTCACTCCATTGG
EV548377       --> TAGATTGTCATTGTTTGGGTTCCTGGTGATCGCTGTCGTCACTCCATTGG
EW725305       --> TAGATTGTCATTGTTTGGGTTCCTGGTGATCGCTGTCGTCACTCCATTGG
EW731751       --> TAGATTGTCATTGTTTGGGTTCCTGGTGATCGCTGTCGTCACTCCATTGG
EX756804       --> TAGATTGTCACTGTTTGGGTTCCTGGTGATCGCTGTCGTCACTCCATTGG
EY933558       --> TAGATTGTCATTGTTTGGGTTCCTGGTGATCGCTGTCGTCACTTCATTGG
FD947659       --> TAGATTGTCATTGTTTGGGTTCCTGGTGATCGCTGTCGTCACTCCATTGG
FD978989       --> TAGATTGTCATTGTTTGGGTTCCTGGTGATCGCTGTCGTCACTCCATTGG
FD989050       --> TAGATTGTCATTGTTTGGGTTCCTGGTGATCGCTGTCGTCACCCCATTGG
EY914234       --> TAGATTGTCATTGTTTGGGTTCCTGGTGATCGCTGTCGTCACTCCATTGG
FD556017       --> TAGATTGTCATTGTTTGGGTTCCTGGTGATCGCTGTCGTCACTCCATTGG
EV525077       --> ..................................................
EX756256       --> ..................................................

               201    -    251
UN06095        --> CGGAAGCTACAAGAAAGTCTGTCGTTCTGGGAGGGAAGTCAGATGTTCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728501       <-- CGGACGCTACAAGAAAGTCTGTCGTTCTGGGAGGGAAGTCAGATGTTCCG  Raphanus sativus cv Early Scarlet Globe
EW736393       <-- CGGAAGCTACAAGAAAGTCTGTCGTTTTGGGAGGGAAGTCAGATGTTCCG  Raphanus sativus cv Rat-Tail Radish #3870
EX760534       <-- CGGAAGCTACAAGAAAGTCTGTCGTTCTGGGAGGGAAGTCAGATGTTCCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY928999       <-- CGGAAGCTACAAGAAAGTCTGTCGTTCTGGGAGGGAAGTCAGATGTTCCG  Raphanus sativus var. oleiformis
FD975131       <-- CGGAAGCTACAAGAAAGTCTGTCGTTCTGGGAGGGAAGTCAGATGTTCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD984881       <-- CGGACGCTACAAGAAAGTCTGTCGTTCTGGGAGGGAAGTCAGATGTTCCG  Raphanus raphanistrum subsp. landra
EW729955       <-- CGGACGCTATAAGAAAGTCTGTCGTTCTGGGAGGGAAGTCAGATGTTCCG  Raphanus sativus cv Early Scarlet Globe
EY910318       <-- CGGAAGCTACAAGAAAGTCTGTCGTTCTGGGAGGGAAGTCAGATGTTCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552391       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW724016       --> CGGACGCTACAAGAAAGTCTGTCGTTCTGGGAGGGAAGTCAGATGTTCCG  Raphanus sativus cv Early Scarlet Globe
EV548377       --> CGGAAGCTACAAGAAAGTCTGTCGTTCTGGGAGGGAAGTCAGATGTTCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725305       --> CGGACGCTATAAGAAAGTCTGTCGTTCTGGGAGGGAAGTCAGATGTTCCG  Raphanus sativus cv Early Scarlet Globe
EW731751       --> CGGAAGCTACAAGAAAGTCTGTCGTTCTGGGAGGGAAGTCAGATGTTCCG  Raphanus sativus cv Rat-Tail Radish #3870
EX756804       --> CGGAAGCTACAAGAAAGTCTGTCGTTCTGGGAGGGAAGTCAGATGTTCCG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933558       --> CGGAAGCTACAAGAAAGTCTGTCGTTCTGGGAGGGAAGTCAGATGTTCCG  Raphanus sativus var. oleiformis
FD947659       --> CGGACGCTACAAGAAAGTCTGTCGTTCTGGGAGGGAAGTCAGATGTTCCG  Raphanus sativus cv Early Scarlet Globe
FD978989       --> CGGAAGCTACAAGAAAGTCTGTCGTTCTGGGAGGGAAGTCAGATGTTCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989050       --> CGGACGCTACAAGAAAGTCTGTCGTTCTGGGAGGGAAGTCAGATGTTCCG  Raphanus raphanistrum subsp. landra
EY914234       --> CGGAAGCTACAAGAAAGTCTGTCGTTCTGGGAGGGAAGTCAGATGTTCCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556017       --> CGGACGCTACAAGAAAGTCTGTCGTTCTGGGAGGGAAGTCAGATGTTCCG  Raphanus raphanistrum subsp. landra
EV525077       --> .................gCTGTCGTTCTGGGAGGGAAGTCAGATGTTCCG  Raphanus raphanistrum subsp. maritimus
EX756256       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               251    -    301
UN06095        --> AATGTTCAGACCAACATGGAAATTCAAGAACTTGGAAGGTACTGCGTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728501       <-- AATGTTCAGACCAACATGGAAATTCAAGAACTTGGAAGGTACTGCGTGGA  Raphanus sativus cv Early Scarlet Globe
EW736393       <-- AATGTTCAGACCAACATGGAAATTCAAGAACTTGGAAGGTACTGCGTGGA  Raphanus sativus cv Rat-Tail Radish #3870
EX760534       <-- AATGTTCAGACCAACATGGAAATTCAAGAACTTGGAAGGTACTGCGTGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY928999       <-- AATGTTCAGACCAACATGGAAATTCAAGAACTTGGAAGGTACTGCGTGGA  Raphanus sativus var. oleiformis
FD975131       <-- AATGTTCAGACCAACATGGAAATTCAAGAACTTGGAAGGTACTGCGTGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD984881       <-- AATGTTCAGACCAACATGGAAATTCAAGAACTTGGAAGGTACTGCGTGGA  Raphanus raphanistrum subsp. landra
EW729955       <-- AATGTTCAGACCAACATGGAAATTCAAGAACTTGGAAGGTACTGCGTGGA  Raphanus sativus cv Early Scarlet Globe
EY910318       <-- AATGTTCAGACCAACATGGAAATTCAAGAACTTGGAAGGTACTGCGTGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552391       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW724016       --> AATGTTCAGACCAACATGGAAATTCAAGAACTTGGAAGGTACTGCGTGGA  Raphanus sativus cv Early Scarlet Globe
EV548377       --> AATGTTCAGACCAACATGGAAATTCAAGAACTTGGAAGGTACTGCGTGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725305       --> AATGTTCAGACCAACATGGAAATTCAAGAACTTGGAAGGTACTGCGTGGA  Raphanus sativus cv Early Scarlet Globe
EW731751       --> AATGTTCAGACCAACATGGAAATTCAAGAACTTGGAAGGTACTGCGTGGA  Raphanus sativus cv Rat-Tail Radish #3870
EX756804       --> AATGTTCAGACCAACATGGAAATTCAAGAACTTGGAAGGTACTGCGTGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933558       --> AATGTTCAGACCAACATGGAAATTCAAGAACTTGGAAGGTACTGCGTGGA  Raphanus sativus var. oleiformis
FD947659       --> AATGTTCAGACCAACATGGAAATTCAAGAACTTGGAAGGTACTGCGTGGA  Raphanus sativus cv Early Scarlet Globe
FD978989       --> AATGTTCAGACCAACATGGAAATTCAAGAACTTGGAAGGTACTGCGTGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989050       --> AATGTTCAGACCAACATGGAAATTCAAGAACTTGGAAGGTACTGCGTGGA  Raphanus raphanistrum subsp. landra
EY914234       --> AATGTTCAGACCAACATGGAAATTCAAGAACTTGGAAGGTACTGCGTGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556017       --> AATGTTCAGACCAACATGGAAATTCAAGAACTTGGAAGGTACTGCGTGGA  Raphanus raphanistrum subsp. landra
EV525077       --> AATGTTCAGACCAACATGGAAATTCAAGAACTTGGAAGGTACTGCGTGGA  Raphanus raphanistrum subsp. maritimus
EX756256       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               301    -    351
UN06095        --> GCAATTCAACCTAATGGAAGAGAGTGAGCAAGGAAACGCAGCATCCATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728501       <-- ACAATTCAACCTAATGGAAGAGAGTGAGCAAGGAAACGCAGCATCCATTG  Raphanus sativus cv Early Scarlet Globe
EW736393       <-- GCAATTCAACCTAATGGAAGAGAGTGAGCAAGGAAACGCAGCATCCACTG  Raphanus sativus cv Rat-Tail Radish #3870
EX760534       <-- GCAATTCAACCTAATGGAAGAGAGTGAGCAAGGAAACGCAGCATCCATTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY928999       <-- GCAATTCAACCTAATGGAAGAGAGTGAGCAAGGAAACGCAGCATCCATTG  Raphanus sativus var. oleiformis
FD975131       <-- TCAATTCAACCTAATGGAAGAGAGTGAGCAAGGAAACGCAGCATCCATTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD984881       <-- ACAATTCAACCTAATGGAAGAGAGTGAGCAAGGAAACGCAGCATCCATTG  Raphanus raphanistrum subsp. landra
EW729955       <-- ACAATTCAACCTAATGGAAGAGAGTGAGCAAGGAAACGTAGCATCCATTG  Raphanus sativus cv Early Scarlet Globe
EY910318       <-- GCAATTCAACCTAATGGAAGAGAGTGAGCAAGGAAACGCAGCATCCATTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552391       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW724016       --> ACAATTCAACCTAATGGAAGAGAGTGAGCAAGGAAACGCAGCATCCATTG  Raphanus sativus cv Early Scarlet Globe
EV548377       --> GCAATTCAACCTAATGGAAGAGAGTGAGCA-TGAAACGCAGCATCCATTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725305       --> ACAATTCAACCTAATGGAAGAGAGTGAGCAAGGAAACGTAGCATCCATTG  Raphanus sativus cv Early Scarlet Globe
EW731751       --> GCAATTCAACCTAATGGAAGAGAGTGAGCAAGGAAACGCAGCATCCACTG  Raphanus sativus cv Rat-Tail Radish #3870
EX756804       --> GCAATTCAACCTAATGGAAGAGAGTGAGCAAGGAAACGCAGCATCCATTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933558       --> GCAATTCAACCTAATGGAAGAGAGTGAGCAAGGAAACGCAGCATCCATTG  Raphanus sativus var. oleiformis
FD947659       --> ACAATTCAACCTAATGGAAGAGAGTGAGCAAGGAAACGCAGCATCCATTG  Raphanus sativus cv Early Scarlet Globe
FD978989       --> TCAATTCAACCTAATGGAAGAGAGTGAGCAAGGAAACGCAGCATCCATTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989050       --> ACAATTCAACCTAATGGAAGAGAGTGAGCAAGGAAACGCAGCATCCATTG  Raphanus raphanistrum subsp. landra
EY914234       --> GCAATTCAACCTAATGGAAGAGAGTGAGCAAGGAAACGCAGCATCCATTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556017       --> TCAATTCAACCTAATGGAAGAGAGTGAGCAAGGAAACGCAGCATCCATTG  Raphanus raphanistrum subsp. landra
EV525077       --> GCAATTCAACCTAATGGAGGAGAGTGAGCAAGGAAACGCAGCATCCATTG  Raphanus raphanistrum subsp. maritimus
EX756256       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               351    -    401
UN06095        --> CGGACACCGCCGTGTTGAATCCGTTGAATTTTAGCAGAGTTTTGTCGGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728501       <-- CGGACACCGCCGTGTTGAATCCGTGGAATTTTAGCAGAGTTTTGTCGGCT
EW736393       <-- CGGACACCGCCGTGTTGAATCCGTTGAATTTTAGCAGAGTTTTGTCGGCT
EX760534       <-- CGGACACCGCCGTGTTGAATCCGTTGAATTTTAGCAGAGTTTTGTCGGCT
EY928999       <-- CGGACACCGCCGTGTTGAATCCGTTGAATTTTAGCAGAGTTTTGTCGGCT
FD975131       <-- CGGACACCGCCGTGTTGAATCCGTTGAATTTTAGCAGAGTTTTGTCGGCT
FD984881       <-- CGGACACCGCCGTGTTGAATCCGTTGAATTTTAGCAGAGTTTTGTCGGCT
EW729955       <-- CGGACACCGCCGTGTTGAATCCGTTGAATTTTAGCAGAGTTTTGTCGGCT
EY910318       <-- CGGACACCGCCGTGTTGAATCCGTTGAATTTTAGCAGAGTTTCGTCGGCT
FD552391       <-- ..................................................
EW724016       --> CGGACACCGCCGTGTTGAATCCGTGGAATTTTAGCAGAGTTTTGTCGGCT
EV548377       --> CGGACACCGCCGTGTTGAATCCGTTGAATTTTAGCAGAGTTTTGTCGGCT
EW725305       --> CGGACACCGCCGTGTTGAATCCGTTGAATTTTAGCAGAGTTTTGTCGGCT
EW731751       --> CGGACACCGCCGTGTTGAATCCGTTGAATTTTAGCAGAGTTTTGTCGGCT
EX756804       --> CGGACACCGCCGTGTTGAATCCGTTGAATTTTAGCAGAGTTTTGTCGGCT
EY933558       --> CGGACACCGCCGTGTTGAATCCGTTGAATTTTAGCAGAGTTTTGTCGGCT
FD947659       --> CGGACACCGCCGTGTTGAATCCGTTGAATTTTAGCAGAGTTTTGTCGGCT
FD978989       --> CGGACACCGCCGTGTTGAATCCGTTGAATTTTAGCAGAGTTTTGTCGGCT
FD989050       --> CGGACACCGCCGTGTTGAATCCGTTGAATTTTAGCAGAGTTTTGTCGGCT
EY914234       --> CGGACACCGCCGTGTTGAATCCGTTGAATTTTAGCAGAGTTTCGTCGGCT
FD556017       --> CGGACACCGCCGTGTTGAATCCGTTGAATTTTAGCAGAGTTTTGTCGGCT
EV525077       --> CGGACACCGCCGTGTTGAATCCGTTGAATTTTAGCAGAGTTTTGTCGGCT
EX756256       --> .....................gGTTGAATTTTAGCAGAGTTTTGTCGGCT

               401    -    451
UN06095        --> CAGAAACAGGTCGTGGCTGGTCTAAAATACAATCTAAGGATTGAAGTGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728501       <-- CAGAAACAGGTCGTGGCTGGTCTAAAATACAATCTAAGGATTGAAGTGAC
EW736393       <-- CAGAAACAGGTCGTGGCTGGTCTAAAATACAATTTAAGGATTGAAGTGAC
EX760534       <-- CAGAAACAGGTCGTGGCTGGTCTAAAATACAATCTAAGGATTGAAGTGAC
EY928999       <-- CAGAAACAGGTCGTGGCTGGTCTAAAATACAATCTAAGGATTGAAGTGAC
FD975131       <-- CAGAAACAGGTCGTGGCTGGTCTAAAATACAATCTAAGGATTGAAGTGAC
FD984881       <-- CAGAAACAGGTCGTGGCTGGTCTAAAATACAATCTAAGGATTGAAGTGAC
EW729955       <-- CAGAAACAGGTCGTGGCTGGTCTAAAATACAATCTAAGGATTGAAGTGAC
EY910318       <-- CAGAAACAGGTCGTGGCTGGTCTAAAATACAATCTAAGGATTGAAGTGAC
FD552391       <-- .......................AAAATACAATTTAAGGATTGAAGTGAC
EW724016       --> CAGAAACAGGTCGTGGCTGGTCTAAAATACAATCTAAGGATTGAAGTGAC
EV548377       --> CAGAAACAGGTCGTGGCTGGTCTAAAATACAATCTAAGGATTGAAGTGAC
EW725305       --> CAGAAACAGGTCGTGGCTGGTCTAAAATACAATCTAAGGATTGAAGTGAC
EW731751       --> CAGAAACAGGTCGTGGCTGGTCTAAAATACAATCTAAGGATTGAAGTGAC
EX756804       --> CAGAAACAGGTCGTGGCTGGTCTAAAATACAATCTAAGGATTGAAGTGAC
EY933558       --> CAGAAACAGGTCGTGGCTGGTCTAAAATACAATCTAAGGATTGAAGTGAC
FD947659       --> CAGAAACAGGTCGTGGCTGGTCTAAAATACAATCTAAGGATTGAAGTGAC
FD978989       --> CAGAAACAGGTCGTGGCTGGTCTAAAATACAATCTAAGGATTGAAGTGAC
FD989050       --> CAGAAACAGGTCGTGGCTGGTCTAAAATACAATCTAAGGATTGAAGTGAC
EY914234       --> CAGAAACAGGTCGTGGCTGGTCTAAAATACAATCTAAGGATTGAAGTGAC
FD556017       --> CAGAAACAGGTCGTGGCTGGTCTAAAATACAATCTAAGGATTGAAGTGAC
EV525077       --> CAGAAACAGGTCGTGGCTGGTCTAAAATACAATCTAAGGATTGAAGTGAC
EX756256       --> CAGAAACAGGTCGTGGCTGGTCTAAAATACAATCTAAGGATTGAAGTGAC

               451    -    501
UN06095        --> TCAACCCGATGGCACGAGCAGGATGTTTGACTCAGTTGTGGTTATTCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728501       <-- TCAACCCGATGGCACGAGCAGGATGTTTGACTCAGTTGTGGTTATTCAAC
EW736393       <-- TCAACCCGATGGCACGAGCAGGATGTTTGACTCAGTTGTGGTTATTCAAC
EX760534       <-- TCAACCCGATGGCACGAGCAGGATGTTTGACTCAGTTGTGGTTATTCAAC
EY928999       <-- TCAACCCGATGGCACGAGCAGGATGTTTGACTCAGTTGTGATTATTCAAC
FD975131       <-- TCAACCCGATGGCACGAGCAGGATGTTTGACTCAGTTGTGGTTATTCAAC
FD984881       <-- TCAACCCGATGGCACGAGCAGGATGTTTGACTCAGTTGTGGTTATTCAAC
EW729955       <-- TCAACCCGATGGCACGAGCAGGATGTTTGACTCAGTTGTGGTTATTCAAC
EY910318       <-- TCAACCCGATGGCACGAGCAGGATGTTTGACTCAGTTGTGGTTATTCAAC
FD552391       <-- TCAACCCGATGGCACGAGCAGGATGTTTGATTCAGTTGTGGTTATTCAAC
EW724016       --> TCAACCCGATGGCACGAGCAGGATGTTTGACTCAGTTGTGGTTATTCAAC
EV548377       --> TCAACCCGATGGCACGAGCAGGATGTTTGACTCAGTTGTGGTTATTCAAC
EW725305       --> TCAACCCGATGGCACGAGCAGGATGTTTGACTCAGTTGTGGTTATTCAAC
EW731751       --> TCAACCCGATGGCACGAGCAGGATGTTTGACTCAGTTGTGGTTATTCAAC
EX756804       --> TCAACCCGATGGCACGAGCAGGATGTTTGACTCAGTTGTGGTTATTCAAC
EY933558       --> TCAACCCGATGGCACGAGCAGGATGTTTGACTCAGTTGTGATTATTCAAC
FD947659       --> TCAACCTGATGGCACGAGCAGGATGTTTGACTCAGTTGTGGTTATTCAAC
FD978989       --> TCAACCCGATGGCACGAGCAGGATGTTTGACTCAGTTGTGGTTATTCAAC
FD989050       --> TCAACCCGATGGCACGAGCAGGATGTTTGACTCAGTTGTGGTTATTCAAC
EY914234       --> TCAACCCGATGGCACGAGCAGGATGTTTGACTCAGTTGTGGTTATTCAAC
FD556017       --> TCAACCCGATGGCACGAGCAGGATGTTTGACTCAGTTGTGGTTATTCAAC
EV525077       --> TCAACCCGATGGCACGAGCAGGATGTTTGACTCAGTTGTGGTTATTCAAC
EX756256       --> TCAACCCGATGGCACGAGCAGGATGTTTGACTCAGTTGTGGTTATTCAAC

               501    -    551
UN06095        --> CATGGCTCCATTCGAAGAAGTTACTCGGTTTCACTCCCGTTGCTACTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728501       <-- CATGGCTCCATTCGAAGAAGTTACTCGGTTTCACTCCCGTTGCTACTCCT
EW736393       <-- CATGGCTCCATTCGAAGAAGTTACTCGGTTTCACTCCCGTTGCTACTCCT
EX760534       <-- CATGGCTCCATTCGAAGAAGTTACTCGGTTTCACTCCCGTTGCTACTCCT
EY928999       <-- CATGGCTCCATTCGAAGAAGTTACTCGGTTTCACTCCCGTTGCTACTCCT
FD975131       <-- CATGGCTCCATTCGAAGAAGTTACTCGGTTTCACTCCCGTTGCTACTCCT
FD984881       <-- CATGGCTCCATTCGAAGAAGTTACTCGGTTTCACTCCCGTTGCTACTCCT
EW729955       <-- CATGGCTCCATTCGAAGAAGTTACTCGGTTTCACTCCCGTTGCTACTCCT
EY910318       <-- CATGGCTCCATTCGAAGAAGTTACTCGGTTTCACTCCCGTTGCTACTCCT
FD552391       <-- CATGGCTCCATTCGAAGAAGTTACTCGGTTTCACTCCCGTTGCTACTCCT
EW724016       --> CATGGCTCCATTCGAAGAAGTTACTCGGTTTCACTCCCGTTGCTACTCCT
EV548377       --> CATGGCTCCATTCGAAGAAGTTACTCGGTTTCACTCCCGTTGCTACTCCT
EW725305       --> CATGGCTCCATTCGAAGAAGTTACTCGGTTTCACTCCCGTTGCTACTCCT
EW731751       --> CATGGCTCCATTCGAAGAAGTTACTCGGTTTCACTCCCGTTGCTACTCCT
EX756804       --> CATGGCTCCATTCGAAGAAGTTACTCGGTTTCACTCCCGTTGCTACTCCT
EY933558       --> CATGGCTCCATTCGAAGAAGTTACTCGGTTTCACTCCCGTTGCTACTCCT
FD947659       --> CATGGCTCCATTCGAAGAAGTTACTCGGTTTCACTCCCGTTGCTACTCCT
FD978989       --> CATGGCTCCATTCGAAGAAGTTACTCGGTTTCACTCCCGTTGCTACTCCT
FD989050       --> CATGGCTCCATTCGAAGAAGTTACTCGGTTTCACTCCCGTTGCTACTCCT
EY914234       --> CATGGCTCCATTCGAAGAAGTTACTCGGTTTCACTCCCGTTGCTACTCCT
FD556017       --> CATGGCTCCATTCG....................................
EV525077       --> CATGGCTCCATTCGAAGAAGTTACTCGGTTTCACTCCCGTTGCTACTCCT
EX756256       --> CATGGCTCCATTCGAAGAAGTTACTCGGTTTCACTCCCGTTGCTACTCCT

               551    -    601
UN06095        --> GTCTACTAACTTTATTTCTTTATTGGCCAAACAAGTTTCTATAATATAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728501       <-- GTCTACTAACTTTATTTCTTTATTGGCCAAACAAGTTTCTATAATATAAT
EW736393       <-- GTCTACTAACTTTATTTCTTTATTGGCCAAACAAGTTTCTATAATATAAT
EX760534       <-- GTCTACTAACTTTATTTCTTTATTGGCCAAACAAGTTTCTATAATATAAT
EY928999       <-- GTCTACTAACTTTATTTCTTTATTGGCCAAACAAGTTTCTATAATATAAT
FD975131       <-- GTCTACTAACTTTATTTCTTTATTGGCCAAACAAGTTTCTATAATATAAT
FD984881       <-- GTCTACTAACTTTATTTCTTTATTGGCCAAACAAGTTTCTATAATATAAT
EW729955       <-- GTCTACTAACGGTATTTCTTTATTGGCCAAACAAGTTTCTATAATATAAT
EY910318       <-- GTCTACTAACTTTATTTCTTTATTGGCCAAACAAGTTTCTATAATATAAT
FD552391       <-- GTTTACTAACTTTATTTCTTTATTGGCCAAACAAGTTTCTATAATATAAT
EW724016       --> GTCTACTAACTTTATTTCTTTATTGGCCAAACAAGTTTCTATAATATAAT
EV548377       --> GTCTACTAACTTTATTTCTTTATTGGCCAAACAAGTTTCTATAATATAAT
EW725305       --> GTCTACTAACGGTATTTCTTTATTGGCCAAACAAGTTTCTATAATATAAT
EW731751       --> GTCTACTAACTTTATTTCTTTATTGGCCAAACAAGTTTCTATAATATAAT
EX756804       --> GTCTACTAACTTTATTTCTTTATTGGCCAAACAAGTTTCTATAATATAAT
EY933558       --> GTCTACTAACTTTATTTCTTTATTGGCCAAACAAGTTTCTATAATATAAT
FD947659       --> GTCTACTAACTTTATTTCTTTATTGGCCAAACAAGTTTCTATAATATAAT
FD978989       --> GTCTACTAACTTTATTTCTTTATTGGCCAAACAAGTTTCTATAATATAAT
FD989050       --> GTCTACTAACTTTATTTCTTTATTGGCCAAACAAGTTTCTATAATATAAT
EY914234       --> GTCTACTAACTTTATTTCTTTATTGGCCAAACAAGTTTCTATAATATAAT
FD556017       --> ..................................................
EV525077       --> GTCTACTAACTTTATTTCTTTATTGGCCAAACAAGTTTCTATAATATAAT
EX756256       --> GTCTACTAACTTTATTTCTTTATTGGCCAAACAAGTTTCTATAATATAAT

               601    -    651
UN06095        --> CCAAAAAGATCAAAAGTGTTCAATGATATGAAGCTATTAACAATGGTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728501       <-- CCAAAAAGATCAAAAGTGTTTAATGATATGAAGCTATTAACAATGGTTTA  Raphanus sativus cv Early Scarlet Globe
EW736393       <-- CCAAAAAGATCAAAAGCGTTCAATGATATGAAGCTATTAACAATGGTTTA  Raphanus sativus cv Rat-Tail Radish #3870
EX760534       <-- CCAAAAAGATCAAAAGTGTTCAATGATATGAAGCTATTAACAATGGTTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY928999       <-- CCAAAAAGATCAAAAGTGTTCAATGATATGAAGCTATTAACAATGGTTTA  Raphanus sativus var. oleiformis
FD975131       <-- CCAAAAAGATAAAAAGTGTTCAATGATATGAAGCTACTAACAATGGTTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD984881       <-- CCAAAAAGATCAAAAGTGTTTAATGATATGAAGCTATTAACAATGGTTTA  Raphanus raphanistrum subsp. landra
EW729955       <-- CCAAAAAGATCAAAAGTGTTTAATGATGTGAAGCTATTAACAATGGTTTA  Raphanus sativus cv Early Scarlet Globe
EY910318       <-- CCAAAAAGATAAAAAGTGTTCAATGATATGAAGCTACTAACAATGGTTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552391       <-- CCAAAAAGATCAAAGGTGTTTAATGATATGAAGCTATTAACAATGGTTTA  Raphanus raphanistrum subsp. landra
EW724016       --> CCAAAAAGATCAAAAGTGTTTAATGATATGAAGCTATTAACAATGGTTTA  Raphanus sativus cv Early Scarlet Globe
EV548377       --> CCAAAAAGATCAAAAGTGTTCAATGATATGAAGCTATTAACAATGGTTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725305       --> CCAAAAAGATCAAAAGTGTTTAATGATGTGAAGCTATTAACAATGGTTTA  Raphanus sativus cv Early Scarlet Globe
EW731751       --> CCAAAAAGATCAAAAGCGTTCAATGATATGAAGCTATTAACAATGGTTTA  Raphanus sativus cv Rat-Tail Radish #3870
EX756804       --> CCAAAA-GATCAAAAGTGTTCAATGATATGAAGCTATTAACAATGGTTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933558       --> CCAAAAAGATCAAAAGTGTTCAATGATATGAAGCTATTAACAATGGTTTA  Raphanus sativus var. oleiformis
FD947659       --> CCAAAAAGATCAAAAGTGTTTAATGATATGAAGCTATTAACAATGGTTTA  Raphanus sativus cv Early Scarlet Globe
FD978989       --> CCAAAA-GAT-AAAAGTGTTCAATGATATGAAGCTACTAACAATGGTTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989050       --> CCAAAAAGATCAAAAGTGTTTAATGATATGAAGCTATTAACAATGGTTTA  Raphanus raphanistrum subsp. landra
EY914234       --> CCAAAAAGATAAAAAGTGTTCAATGATATGAAGCTACTAACAATGGTTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556017       --> ..................................................  Raphanus raphanistrum subsp. landra
EV525077       --> CCAAAAAGATCAAAAGTGTTCAATGATATGAAGCTATTAACAATGGTTTA  Raphanus raphanistrum subsp. maritimus
EX756256       --> CCAAAAAGATAAAAAGTGTTCAATGATATGAAGCTACTAACAATGGTTTA  Raphanus raphanistrum subsp. raphanistrum (MS)

               651    -    701
UN06095        --> ATAGTTGGTTTTGTAATGTTTCACGTTGTTCATAATGAAGACAAAAGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728501       <-- ATAGTTGGTTTTGTAATGTTTCACGTTGTTCATAATGAAGACAAAAGATG  Raphanus sativus cv Early Scarlet Globe
EW736393       <-- ATAGTTGGTTTTGTAATGTTTCACGTTGTTCATAATGAAGACAAAAGATG  Raphanus sativus cv Rat-Tail Radish #3870
EX760534       <-- ATAGTTGGTTTT-TAATGTTTCACGTTGTTCATAATGAAGACAAAAGATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY928999       <-- ATAGTTGGTTTTGTAATGTTTCACGTTGTTCATAATGAAGACAAAAGATG  Raphanus sativus var. oleiformis
FD975131       <-- ATAGTTGGTTTT-TAATGTTTCACGTTGTTCATAATGAATACAAAAGATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD984881       <-- ATAGTTGGTTTTGTAATGTTTCACGTTGTTCATAATGAAGACAAAAGATG  Raphanus raphanistrum subsp. landra
EW729955       <-- ATAGTTGGTTTTGTAATGTTTCACGTTGTTCATAATGAAGACAAAAGATG  Raphanus sativus cv Early Scarlet Globe
EY910318       <-- ATAGTTGGTTTT-TAATGTTTCACGTTGTTCATAATGAAGACAAAAGATG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD552391       <-- ATAGTTGGTTTTGTAATGTTTCACGTTGTTCATAATGAAGACAAAAGATG  Raphanus raphanistrum subsp. landra
EW724016       --> ATAGTTGGTTTTGTAATGTTTCACGTTGTTCATAATGAAGACAAAAGATG  Raphanus sativus cv Early Scarlet Globe
EV548377       --> ATAGTTGGTTTTGTAATGTTTCACGTTGTTCATAATGAAGACAAAAGATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW725305       --> ATAGTTGGTTTTGTAATGTTTCACGTTGTTCATAATGAAGACAAA-GATG  Raphanus sativus cv Early Scarlet Globe
EW731751       --> ATAGTTGGTTTTGTAATGTTTCACGTTGTTCATAATGAAGACAAAAGATG  Raphanus sativus cv Rat-Tail Radish #3870
EX756804       --> ATAGTTGGTTTT-TAATGTTTCACGTTGTTCATAATGA-GACAAAAGATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY933558       --> ATAGTTGGTTTTGTAATGTTTCACGTTGTTCATAATGAAGACAAA-GATG  Raphanus sativus var. oleiformis
FD947659       --> AT................................................  Raphanus sativus cv Early Scarlet Globe
FD978989       --> AT................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD989050       --> ATAGTTGGTTTTGTAATGTTTCACGTTGTTCATAATGA-GACAAAAGATG  Raphanus raphanistrum subsp. landra
EY914234       --> ATAGTTGGTTTT-TAATGTTTCACGTTGTTCATAATGAAG..........  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556017       --> ..................................................  Raphanus raphanistrum subsp. landra
EV525077       --> ATAGTTGGTTTTGTAATGTTTCACGTTGTTCATAATGAAGACAAAAGATG  Raphanus raphanistrum subsp. maritimus
EX756256       --> ATAGTTGGTTTT-TAATGTTTCACGTTGTTCATAATGAAGACAAAAGATG  Raphanus raphanistrum subsp. raphanistrum (MS)

               701    -    751
UN06095        --> TTATGAAGATGTGATGAGAGACTTGTTAGAATATATAATGCTAAATTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728501       <-- TTATGAAG..........................................
EW736393       <-- TTATGAAG..........................................
EX760534       <-- TTATGAAGATGTGATGAGAGACTTGTTAGAATATATAATGCTAAATTTGT
EY928999       <-- TTATGAAGATGTGATGAGAGACTTGTTAGAATATAT..............
FD975131       <-- TTATGAAGATGTGATGAGAGACTTGTTAGAATATATAATGCTA.......
FD984881       <-- TTATGg............................................
EW729955       <-- TTATGAAGATGTGATGAGAGACTTGTTAGAATATAT..............
EY910318       <-- TTATGAAGATGTGATGAGAGACTTGTTAGAATATAT..............
FD552391       <-- TTATGAAGATGTGATGAGAGACTTGTTAGAATATAT..............
EW724016       --> TTATGAAG..........................................
EV548377       --> TTAT..............................................
EW725305       --> TTATGAAGATGTGATGAGAGACTTGT-AG-ATATATAATGCTAA-TTTGT
EW731751       --> TTATGA............................................
EX756804       --> TTATGAAGATGTGATGAGAGACT...........................
EY933558       --> TTATGAAGATGTGATGAGAGACTTGTTAGAATATATAATGCTAAATTTGT
FD947659       --> ..................................................
FD978989       --> ..................................................
FD989050       --> TTATGgaaaaaaa.....................................
EY914234       --> ..................................................
FD556017       --> ..................................................
EV525077       --> TTATGAAG..........................................
EX756256       --> TTATGAAGATGTGATGAGAGACTTGTTAGAATATAT..............

               751    -    801
UN06095        --> TCAATCCAAAAAACTATTTTTACATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~
EW728501       <-- ..........................
EW736393       <-- ..........................
EX760534       <-- TCAATCCAAAAAACTATTTTTACATC
EY928999       <-- ..........................
FD975131       <-- ..........................
FD984881       <-- ..........................
EW729955       <-- ..........................
EY910318       <-- ..........................
FD552391       <-- ..........................
EW724016       --> ..........................
EV548377       --> ..........................
EW725305       --> c.........................
EW731751       --> ..........................
EX756804       --> ..........................
EY933558       --> TCAATCAAAAAA..............
FD947659       --> ..........................
FD978989       --> ..........................
FD989050       --> ..........................
EY914234       --> ..........................
FD556017       --> ..........................
EV525077       --> ..........................
EX756256       --> ..........................