1      -     51
UN06951        --> GAAGACCGAGCTCCAAGATCAAGATCAACCGGTTAACGGGTCAAACCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY893170       <-- ......................................aGTCAAACCTC-
EY901678       <-- ..................................................
FD529486       <-- ..................................................
EX893312       <-- ..................................................
EY912244       <-- ..................................................
EY916584       --> GAAGACCGAGCTCCAAGATCAAGATCAACCGGTTAACGGGTCAAACCACA
EX889814       --> ..................................................

               51     -    101
UN06951        --> TCAAGCTCAGGAATAGCCATAGGAAGTGAAATGTCAGGGGGTGTATCTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY893170       <-- TCAAGCTCAGGAATAGCCATAGGAAGTGAAATGTCAGGGGGTGTATCTGA
EY901678       <-- .................................TCAGGGGGTGTATCTGA
FD529486       <-- ........................................GTGTATCTGA
EX893312       <-- ..................................................
EY912244       <-- ..................................................
EY916584       --> TCAAGCTCAGGAATAGCCATAGGAAGTGAAATGTCAGGAGGTGTATCTGA
EX889814       --> ..................................................

               101    -    151
UN06951        --> CATCTATATCAAAGACTTGCATCTATTCAATTCCAATACCGGAATCAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY893170       <-- CATCTATATCAAAGACTTGCAACTATTCAATTCCAATACCGGAATCAGAA
EY901678       <-- CATCTATATCAAAGACTTGCATCTATTCAACTCCAATACCGGAATCAGAA
FD529486       <-- CATCTATATCAAAGACTTGCAACTATTCAATTCCAATACCGGAATCAGAA
EX893312       <-- ...........................................ATCAGAA
EY912244       <-- ..................................................
EY916584       --> CATCTATATCAAAGACTTGCATCTATTCAACTCCAATACCGGAATCAGAA
EX889814       --> ..................................................

               151    -    201
UN06951        --> TCAAGACTTCTCCTGGACGAGGCGGGTACGTTAGAAACGTTCACGTGTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY893170       <-- TCAAGACTTCTCCTGGACGAGGCGGGTACGTTAGAAACGTTCACGTGTCT
EY901678       <-- TCAAGACTTCTCCTGGACGAGGTGGGTACGTTAGAAACGTTCACGTGTCT
FD529486       <-- TCAAGACTTCTCCTGGACGAGGCGGGTACGTTAGAAACGTCCACGTGTCT
EX893312       <-- TCAAGACTTCTCCTGGACGAGGCGGGTACGTTAGAAACGTTCATGTGTCT
EY912244       <-- ..................................................
EY916584       --> TCAAGACTTCTCCTGGACGAGGCGGGTACGTTAGAAACGTTCACGTGTCT
EX889814       --> ..................................................

               201    -    251
UN06951        --> AACGTGAAGTTCCATGACGTGCAGAAAGCTATTAGGTTCACGGGTAAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY893170       <-- GACGTGAAGTTCCATAACGTGCAGAAAGCTATTAGGTTCACGGGTAAGTA
EY901678       <-- AACGTGAAGTTCCATGACGTGCAGAAAGCTATTAGGTTCACGGGTAAGTA
FD529486       <-- AACGTGAAGTTCCATGACGTGCAGAAAGCTATTAGGTTCACGGGTAAGTA
EX893312       <-- AACCTGAAGTTCCATAACGTGCAGAAAGCTATTAGGTTCACGGGTAAGTA
EY912244       <-- ..................................................
EY916584       --> AACGTGAAGTTCCATGACGTGCAGAAAGCTATTAGGTTCACGGGTAAGTA
EX889814       --> ..................................................

               251    -    301
UN06951        --> CGGTGAGCATCCTGATGAAAACTTTGATCCCAAGGCACTTCCGGCTATAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY893170       <-- CGGTGAGCATCCTGATGAAAACTTTGATCCCAAGGCACTTCCGGCTATAG
EY901678       <-- CGGTGAGCATCCTGACGAAAACTTTGATCCCAAGGCACTTCCGGCTATAG
FD529486       <-- CGGTGAGCATCCTAATGAAAACTTTGATCCCAAGGCACTTCCGGCTATAG
EX893312       <-- CGGTGAGCATCCTGATGAAAACTTTGATCCCAAGGCACTTCCGGCTATAG
EY912244       <-- ..................................................
EY916584       --> CGGTGAGCATCCTGATGAAAACTTTGATCCCAAGGCACTTCCGGCTATAG
EX889814       --> ...............................................TAG

               301    -    351
UN06951        --> AGAAGATCACGTTTGAGAATGTTAGTGGTGAAGAAATCGGTGTTGCGGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY893170       <-- AGAAGATCACGTTTGAGAATGTTAGCGGTGACGAAATCGGTGTTGCGGGT
EY901678       <-- AGAAGATCACGTTTGAGAATGTTAGTGGTGAAGAAATCGGTGTTGCGGGT
FD529486       <-- AGAAGATCACGTTTGAGAATGTTAGTGGTGAAGAGATCGGTGTTGCGGGT
EX893312       <-- AGAAGATCACGTTTGAGAATGTTAGCGGTGAAGAAATCGGTGTTGCGGGT
EY912244       <-- ..................................................
EY916584       --> AGAAGATCACGTTTGAGAATGTTAGTGGTGAAGAAATCGGTGTTGCGGGT
EX889814       --> AGAAGATCACGTTTGAGAATGTTAGCGGTGAAGAAATCGGTGTTGCGGGT

               351    -    401
UN06951        --> CTTCTTGAAGGTATTGAAGGAGACGAGTTTAAGAACATATGTTTCCTTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY893170       <-- CTTCTTGAAGGTATTGAAGGAGACGAGTTTAAGAACATATGTTTCCTTAA
EY901678       <-- CTTCTTGAAGGTATTGAAGGAGACGAGTTTAAGAACATATGTTTCCTTAA
FD529486       <-- CTTCTTGAAGGTATTGAAGGAGACGATTTCAAGAACATATGTTTCCTTAA
EX893312       <-- CTTCTTGAAGGTATTGAAGGAGACAAGTTTAAGAACATATGTTTCCTTAA
EY912244       <-- ...............GAAGGAGACGAGTTTAAGGACATATGTTTCCTTAA
EY916584       --> CTTCTTGAAGGTATTGAAGGAGACGAGTTTAAGGACATATGTTTCCTTAA
EX889814       --> CTTCTTGAAGGTATTGAAGGAGACGAGTTTAAGAACATATGTTTCCTTAA

               401    -    451
UN06951        --> TGTTACTCTTACGGTGAAGAAGAACTCGAAGAAGTCTCCATGGAAATGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY893170       <-- TGTTACTCTTACGATGAAGAAGAACTCGAAGAAGTCTCCATGGAAATGCT
EY901678       <-- TGTTACTCTTACGGTGAAG---AACTCGAAGAAGTCTCCTTGGAAATGCT
FD529486       <-- TGTTACTCTTACGGTGAAGAAGAACTCGAAGAAGTCTCCATGGAAATGCT
EX893312       <-- TGTTACTCTTACGGTGAAGAAGAACTCGAAGAAGTCTCCATGGAAATGCT
EY912244       <-- TGTTACTCTTACGGTGAAGAAGAACTCGAAGAAGTCTCCATGGAAATGCT
EY916584       --> TGTTACTCTTACGGTGAAGAAGAACTCGAAGAAGTCTCCATGGAAATGCT
EX889814       --> TGTTACTCTTACGGTGAAGAAGAACTCGAAGAAGTCTCCATGGAAATGCC

               451    -    501
UN06951        --> CACATGTTAGAGGCTATTCACAGTGGGTTTCGCCGGAGATTACTTGTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY893170       <-- CAAATGTTAGAGGCTATTCACAGTGGGTTTCGCCGGAGATTACTTGTGAT  Raphanus raphanistrum subsp. maritimus
EY901678       <-- CACATGTTAGAGGCTATTCACAGTGGGTTTCGCCGAAGATTACTTGTGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD529486       <-- CACATGTTAGAGGCTATTCACAGTGGGTTACGCCGGAGATTACTTGTGAT  Raphanus raphanistrum subsp. maritimus
EX893312       <-- CACATGTTAGAGGCTATTCACAGTGGGTTTCGCCGGAGATTACTTGTGAT  Raphanus sativus var. oleiformis
EY912244       <-- CACATGTTAGAGGCTATTCACAGTGGGTTTCGCCGAAGATTACTTGTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916584       --> CACATGTTAGAGGCTATTCACAGTGGGTTTCGCCGAAGATTACTTGTGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX889814       --> CACATGTTAGAGGCTATTCACAGTGGGTTTCGCCGGAGATTACTTGTGAT  Raphanus sativus var. oleiformis

               501    -    551
UN06951        --> TCTTTTGAAGAGAGTATCTTCCCGGAGCATAGCTCTGATTGTTTTGGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY893170       <-- TCTTTTGAAGAGAGTATCTTCCCGGAGCATAGCTCTGATTGTTTTGGGTT
EY901678       <-- TCTTTTGAAGAGAGTATCTTCCCAGAGCATAGCTCTGATTGTTTTGGGTT
FD529486       <-- TCTTTTGAGGAGAGTATCTTCCCGGAGCATAGCTCTGATTGTTTTGGGTT
EX893312       <-- TCTTTTGAAGAGAGTATCTTCCCGGAGCATAGCTCTGATTGTTTTGGGTT
EY912244       <-- TCTTTTGAAGAGAGTATCTTCCCGGAGCATAGCTCTGATTGTTTTGGGTT
EY916584       --> TCTTTTGAAGAGAGTATCTTCCCGGAGCATAGCTCTGATTGTTTTGGGTT
EX889814       --> TCTTTTGAAGAGAGTATCTTCCCGGAGCATAGCTCTGATTGTTTTGGGTT

               551    -    601
UN06951        --> GTCAGAGAATAATCTGGAGAAATCAAGTGGTTTAAGTAGATCACCATGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY893170       <-- GTCAGAGAATAATCTGGAGAAATCAAGTGGTTTAAGTAGATCACCATGGT  Raphanus raphanistrum subsp. maritimus
EY901678       <-- GTCAGAGAATAATCTGGAAAAATCAAGTGGTTTAAGTAGATCACCATGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD529486       <-- GTCAGAGAATAATCTGGAGAAATCAAGTGGTTTAAGTAGATCACCATGGT  Raphanus raphanistrum subsp. maritimus
EX893312       <-- GTCAGAGAATAATCTGGAGAAATCAAGTGGTTTAAGTAGATCACCATGGT  Raphanus sativus var. oleiformis
EY912244       <-- GTCAGAGAATAATCTGGAAAAATCAAGTGGTTTAAGTAGATCACCATGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916584       --> GTCAGAGAATAATCTGGAAAAATCAAGTGGTTTAAGTAGATCACCATGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX889814       --> GTCAGAGAATAATCTGGAGAAATCAAGTGGTTTAAGTAGGTCACCATGGT  Raphanus sativus var. oleiformis

               601    -    651
UN06951        --> TGCTTTCTTGGTAAGTTACTGATGTTTGACCTAAGGGGAACACACAGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY893170       <-- TGCTTTCTTGGTAAGTTACTGATGTTTGACCTAAGGGGAACACACAGTTT
EY901678       <-- TGCTTTCTTGGTAAGTTACTGATGTTTGACCTAAGGGAAACACACAGTTT
FD529486       <-- TGCTTTCTTGGTAAGTTACTGATGTTTGACCTAAGGGGAACACACAGTTT
EX893312       <-- TGCTTTCTTGGTAAGTTACTGATGTTTGACCTAAGGGGAACACACAGTTT
EY912244       <-- TGCTTTCTTGGTAAGTTACTGATGTTTGACCTAAGGGAAACACACAGTTT
EY916584       --> TGCTTTCTTGGTAAGTTACTGATGTTTGACCT..................
EX889814       --> TGCTTTCTTGGTAAGTTACTGATGTTTGACCTAAGGGGAACACACAGTTT

               651    -    701
UN06951        --> GCTTGAGTGTGAAGAAACCTCTTCAAATTTTCCTTCCAATTTTTTTT---
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY893170       <-- GCTTGAGTGTGAAGAAACCTCTTCAAATTTTCCTTCCAATTTTTTTT---
EY901678       <-- GCTTGAGTGTGAAGAAACCTCTTCAAATTTTCCTTCCAATTTTTTTT--T
FD529486       <-- GCTTGAGTGTGAAGAAACCTCTTCAAATTTTCCTTCCAATTTTTTTT---
EX893312       <-- GCTTGAGTGTGAAGAAACCTCTTCAAATTTTCCTTCCAATTTTTTTT---
EY912244       <-- GCTCGAGTGTGAAGAAACCTCTTCAAATTTTCCTTCCAATTTTTTTTTTT
EY916584       --> ..................................................
EX889814       --> GCTTGAGTGTGAAGAAACCTCTTCAAATTTTCCTTCCAATTTTTTT....

               701    -    751
UN06951        --> -CTCTGAGGTTTTTGTTTTTCAAAAGTGATGTTTTCTTCTTTCTTCCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY893170       <-- -CTCTGAGGTTTTTGTTTTTCAAAAGTGATGTTTTCTTCTTTCTTCCTTT
EY901678       <-- TTTCTGAGGTTTTTGTTTTTCAAAAGTGATGTTTTCTTCTTTCTTCATTT
FD529486       <-- -CTCTGAGGTTTTTGTTTTTCAAAAGTGATGTTTTCTTCTTTCTTCCTTT
EX893312       <-- -CTCTGAGGTTTTTGTTTTTCAAAAGTGATGTTTTCTTCTTTTTTCCTTT
EY912244       <-- TTTCTGAGGTTTTTGTTTTTCAAAAGTGATGTTTTTTTCTTTCTTCATTT
EY916584       --> ..................................................
EX889814       --> ..................................................

               751    -    801
UN06951        --> TTGTTGTAAATTTGTGTGCAGTGAGGAGAATAATCAGAGTGACTTGAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY893170       <-- TTGTTGTAAATTTGTGTGCAGTGAGGAGAATAATCAGAGTGACTTGAGAG
EY901678       <-- TTGTTGTAAATTTGTGTGCAGTGAGGAGAATAATCAGAGTGACTTGAGAG
FD529486       <-- TTGTTGTAAATTTGTGTGCAGTGAGGAGAATAATCAGAGTGACTTGAGAG
EX893312       <-- TTGTTGTAAATTTGTGTGCAGTGAGGAGAATAATCAGAGTGACTTGAGAG
EY912244       <-- TTGTTGTAAATTTGTGTGCAGTGAGGAGAATAATCAGAGTGACTTGAGAG
EY916584       --> ..................................................
EX889814       --> ..................................................

               801    -    851
UN06951        --> CTTTTTTGTTGTTGTTTTTTTT-GTATGGATTTTTAATGCTTTGGTGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY893170       <-- CTTTTTTGTTGTTGTTTTTTTT-GTATGGATTTTTAATGCTTTGGTGAGC
EY901678       <-- CTTTTTTGTTGTTGTTTTTTTTTGTATGGATTTTTAATGCTTTGGTGAGC
FD529486       <-- CTTTTTTGTTGTTGTTTTTTTT-GTATGGATTTTCAATGCTTTGGTGAGC
EX893312       <-- CTTTTTTGTTGTTGTTTTTTTTTGTATGGATTTTTAATGCTTTGGTGAGC
EY912244       <-- CTTTTTTGTTGTTGTTTTTTTT-GTATGGATTTTTAATGCTTTGGTGAGC
EY916584       --> ..................................................
EX889814       --> ..................................................

               851    -    901
UN06951        --> AGAACAAGTGTAATATCTTCACAAAGAGACTTGAGGTTTTTTTTTGTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY893170       <-- AGAACAAGTGTAATATCTTCACAAAGAGACTTGAGATTTTT.........
EY901678       <-- AGAACAAGTGTAATATCTTttttttgttatcaattatttatgc.......
FD529486       <-- AGAACAAGTGTAATATCTTCACAAAGAGACTTGAGGTTTTTTTTTGTTTT
EX893312       <-- AGAACAAGTGTAATATCTTCAC............................
EY912244       <-- AGAACAAGTGTAATATCTTttttttgttatcaattatttatgc.......
EY916584       --> ..................................................
EX889814       --> ..................................................

               901    -    951
UN06951        --> TGTTATCAATTATTTACGC
                   ~~~~~~~~~~~~~~~~~~~
EY893170       <-- ...................
EY901678       <-- ...................
FD529486       <-- TGTTATCAATTATTTACGC
EX893312       <-- ...................
EY912244       <-- ...................
EY916584       --> ...................
EX889814       --> ...................