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Alignment for radish unigene UN07170

               1      -     51
UN07170        --> GGGGACGACGTCTCTGTACGTCGGAGATCTAGACCAGACCGTGACGGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574395       <-- ..................................................
EV574221       <-- ..................................................
EW730192       <-- ..................................................
EY910311       <-- ..................................................
FD537815       <-- ..................................................
FD572932       <-- ..................................................
EY894186       <-- ..................................................
FD535408       --> GGGGACGACGTCTCTGTACGTCGGAGATCTAGACCAGACCGTGACGGATT
FD945865       --> ..................................................
FY440529       --> ..................................................
FD541562       --> ..................................................
EY914224       --> ..................................................
EW724867       --> ..................................................
FD941623       --> ..................................................
EV569755       --> ..................................................
EV569987       --> ..................................................
EY898014       --> ..................................................
EX888714       --> ..................................................
FY449806       --> ..................................................
FD568614       --> ..................................................

               51     -    101
UN07170        --> CGCAGCTGTTCGAGGCGTTTGGACAATCCGGTCAGGTGGTTTCTGTTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574395       <-- ..................................................
EV574221       <-- ..................................................
EW730192       <-- ..................................................
EY910311       <-- ..................................................
FD537815       <-- ..................................................
FD572932       <-- ..................................................
EY894186       <-- ..................................................
FD535408       --> CGCAGCTGTTCGAGGCGTTTGGACAATCCGGTCAGGTGGTTTCTGTTCAT
FD945865       --> ..................................................
FY440529       --> ..................................................
FD541562       --> ..................................................
EY914224       --> ..................................................
EW724867       --> ..................................................
FD941623       --> ..................................................
EV569755       --> ..................................................
EV569987       --> ..................................................
EY898014       --> ..................................................
EX888714       --> ..................................................
FY449806       --> ..................................................
FD568614       --> ..................................................

               101    -    151
UN07170        --> GTCTGTAGAGACATGACGACAAGGAGATCTCTTGGCTACGGATACGTTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574395       <-- ..................................................
EV574221       <-- ..................................................
EW730192       <-- ..................................................
EY910311       <-- ..................................................
FD537815       <-- ..................................................
FD572932       <-- ..................................................
EY894186       <-- ..................................................
FD535408       --> GTCTGTAGAGACATGACGACAAGGAGATCTCTTGGCTACGGATACGTTAA
FD945865       --> ..................................................
FY440529       --> ..................................................
FD541562       --> ..................................................
EY914224       --> ..................................................
EW724867       --> ..................................................
FD941623       --> ..................................................
EV569755       --> ..................................................
EV569987       --> ..................................................
EY898014       --> ..................................................
EX888714       --> ..................................................
FY449806       --> ..................................................
FD568614       --> ..................................................

               151    -    201
UN07170        --> CTACGCCACTCCTCAAGATGCTACAAGGGCACTGAATGATATGAACTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574395       <-- ..................................................
EV574221       <-- ..................................................
EW730192       <-- ..................................................
EY910311       <-- ..................................................
FD537815       <-- ..................................................
FD572932       <-- ..................................................
EY894186       <-- ..................................................
FD535408       --> CTACGCCACTCCTCAAGATGCTACAAGGGCACTGAATGATATGAACTTCA
FD945865       --> ..................................................
FY440529       --> ..................................................
FD541562       --> ..................................................
EY914224       --> ..................................................
EW724867       --> ..................................................
FD941623       --> ..................................................
EV569755       --> ..................................................
EV569987       --> ..................................................
EY898014       --> ..................................................
EX888714       --> ..................................................
FY449806       --> ..................................................
FD568614       --> ..................................................

               201    -    251
UN07170        --> TGCCTCTCAATGGAAGGGCTATTAGAGTTATGTACTCTGTTCGTGATCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574395       <-- ..................................................
EV574221       <-- ..................................................
EW730192       <-- ..................................................
EY910311       <-- ..................................................
FD537815       <-- ..................................................
FD572932       <-- ..................................................
EY894186       <-- ..................................................
FD535408       --> TGCCTCTCAATGGAAGGGCTATTAGAGTTATGTACTCTGTTCGTGATCCA
FD945865       --> ..................................................
FY440529       --> ..................................................
FD541562       --> ..................................................
EY914224       --> ..................................................
EW724867       --> ..................................................
FD941623       --> ..................................................
EV569755       --> ..................................................
EV569987       --> ..................................................
EY898014       --> ..................................................
EX888714       --> ..................................................
FY449806       --> ..................................................
FD568614       --> ..................................................

               251    -    301
UN07170        --> AGTGTCCGTAAAAGCGGACTTGGTAACATATTTATCAAGAATCTTGACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574395       <-- ..................................................
EV574221       <-- ..................................................
EW730192       <-- ..................................................
EY910311       <-- ..................................................
FD537815       <-- ..................................................
FD572932       <-- ..................................................
EY894186       <-- ..................................................
FD535408       --> AGTGTCCGTAAAAGCGGACTTGGTAACATATTTATCAAGAATCTTGACAA
FD945865       --> ..................................................
FY440529       --> ..................................................
FD541562       --> ..................................................
EY914224       --> ..................................................
EW724867       --> ..................................................
FD941623       --> ..................................................
EV569755       --> ..................................................
EV569987       --> ..................................................
EY898014       --> ..................................................
EX888714       --> ..................................................
FY449806       --> ..................................................
FD568614       --> ..................................................

               301    -    351
UN07170        --> ATCGATCGATCACAAAGCACTCCACGAGACATTCTCTGCCTTTGGTCCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574395       <-- ..................................................
EV574221       <-- ..................................................
EW730192       <-- ..................................................
EY910311       <-- ..................................................
FD537815       <-- ..................................................
FD572932       <-- ..................................................
EY894186       <-- ..................................................
FD535408       --> ATCGATCGATCACAAAGCACTCCACGAGACATTCTCTGCCTTTGGTCCTA
FD945865       --> ..................................................
FY440529       --> ..................................................
FD541562       --> ..................................................
EY914224       --> ..................................................
EW724867       --> ..................................................
FD941623       --> ..................................................
EV569755       --> ..................................................
EV569987       --> ..................................................
EY898014       --> ..................................................
EX888714       --> ..................................................
FY449806       --> ..................................................
FD568614       --> ..................................................

               351    -    401
UN07170        --> TCTTGTCTTGCAAAGTGGCTGTTGATCCCTCTGGCCAGTCAAAAGGCTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574395       <-- ..................................................
EV574221       <-- ..................................................
EW730192       <-- ..................................................
EY910311       <-- ..................................................
FD537815       <-- ..................................................
FD572932       <-- ..................................................
EY894186       <-- ..................................................
FD535408       --> TCTTGTCTTGCAAAGTGGCTGTTGATCCCTCTGGCCAGTCAAAAGGCTAC
FD945865       --> .........GCAAAGTGGCTGTTGATCCCTCTGGCCAGTCAAAAGGCTAC
FY440529       --> ............AAGTGGCTGTTGATCCCTCTGGCCAGTCAAAAGGCTAC
FD541562       --> ..................................................
EY914224       --> ..................................................
EW724867       --> ..................................................
FD941623       --> ..................................................
EV569755       --> ..................................................
EV569987       --> ..................................................
EY898014       --> ..................................................
EX888714       --> ..................................................
FY449806       --> ..................................................
FD568614       --> ..................................................

               401    -    451
UN07170        --> GGCTTTGTGCAGTACGACACTGAGGAAGCAGCTCAGAGAGCCATTGAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574395       <-- ..................................................
EV574221       <-- ..................................................
EW730192       <-- ..................................................
EY910311       <-- ..................................................
FD537815       <-- ..................................................
FD572932       <-- ..................................................
EY894186       <-- ..................................................
FD535408       --> GGCTTTGTGCAGTACGATACTGAGGAAGCAGCTCAGAGAGCCATTGAGCA
FD945865       --> GGCTT-GTGCAGTACGACACTGAGGAAGCAGCGCAGAGAGCCATTGAGCA
FY440529       --> GGCTTTGTGCAGTACGACACTGAGGAAGCGGCTCAGAGAGCCATTGAGCA
FD541562       --> ..................................................
EY914224       --> ..................................................
EW724867       --> ..................................................
FD941623       --> ..................................................
EV569755       --> ..................................................
EV569987       --> ..................................................
EY898014       --> ..................................................
EX888714       --> ..................................................
FY449806       --> ..................................................
FD568614       --> ..................................................

               451    -    501
UN07170        --> GTTGAATGGGATGCTTCTTAACGACAAGCAAGTGTACGTTGGACCCTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574395       <-- ..................................................
EV574221       <-- ..................................................
EW730192       <-- ..................................................
EY910311       <-- ..................................................
FD537815       <-- ..................................................
FD572932       <-- ..................................................
EY894186       <-- ..................................................
FD535408       --> GTTGAATGGGATGCTTCTTAACGACAAGCAAGTGTACGTTGGCCCCTTTG
FD945865       --> GTTGAATGGGATGCTTCTTAACGACAAGCAAGTCTACGTTGGACCCTTTG
FY440529       --> GTTGAATGGGATGCTTCTCAACGACAAGCAAGTGTACGTTGGACCCTTTG
FD541562       --> ..................................................
EY914224       --> ..................................................
EW724867       --> ..................................................
FD941623       --> ..................................................
EV569755       --> ..................................................
EV569987       --> ..................................................
EY898014       --> ..................................................
EX888714       --> ..................................................
FY449806       --> ..................................................
FD568614       --> ..................................................

               501    -    551
UN07170        --> TTCACAAGCAGCAGAGAGATCCTTCTGGTGAGAAGGTGAAGTTCAACAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574395       <-- ..................................................
EV574221       <-- ..................................................
EW730192       <-- ..................................................
EY910311       <-- ..................................................
FD537815       <-- ..................................................
FD572932       <-- ..................................................
EY894186       <-- ..................................................
FD535408       --> TTCACAAGCAGCAGAGAGATCCTTCTGGTGAGAAGGTGAAGTTCAACAAT
FD945865       --> TTCATAAGCAGCAGAGAGATCCTTCTGGTGAGAAGGTAAAGTTCAACAAT
FY440529       --> TTCACAAGCAGCAGAGAGATCCTTCTGGTGAGAAGGTGAAGTTCAACAAT
FD541562       --> ..................................................
EY914224       --> ..................................................
EW724867       --> ..................................................
FD941623       --> ..................................................
EV569755       --> ..................................................
EV569987       --> ..................................................
EY898014       --> ..................................................
EX888714       --> ..................................................
FY449806       --> ..................................................
FD568614       --> ..................................................

               551    -    601
UN07170        --> GTCTATGTCAAAAACCTCTCGGAGTCCATGAGTGACGAGGAGCTGAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574395       <-- ..................................................
EV574221       <-- ..................................................
EW730192       <-- ..................................................
EY910311       <-- ..................................................
FD537815       <-- ..................................................
FD572932       <-- ..................................................
EY894186       <-- ..................................................
FD535408       --> GTCTATGTCAAAAACCTCTCGGAGTCCATGAGTGACGAGGAGCTGAAGAA
FD945865       --> GTCTATGTCAAAAACCTCTCGGAGTCCATGAGCGACGAAGAGCTGAAGAA
FY440529       --> GTCTATGTCAAAAACCTCTCGGAGTCCATGAGTGACGAGGAGCTGAAGAA
FD541562       --> ..................................................
EY914224       --> ..................................................
EW724867       --> ..................................................
FD941623       --> ..................................................
EV569755       --> ..................................................
EV569987       --> ..................................................
EY898014       --> ..................................................
EX888714       --> ..................................................
FY449806       --> ..................................................
FD568614       --> ..................................................

               601    -    651
UN07170        --> AGTGTTTGGAGAGTTTGGAGTGACGACTAGCTGCGTTATCATGAGAGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574395       <-- ..................................................
EV574221       <-- ..................................................
EW730192       <-- ..................................................
EY910311       <-- ..................................................
FD537815       <-- ..................................................
FD572932       <-- ..................................................
EY894186       <-- ..................................................
FD535408       --> AGTGTTTGGAGAGTTTGGAGTGACGACTAGCTGCGTTATCATGAGAGATG
FD945865       --> AGTGTTTGGAGAGTTTGGAGTGACGACTAGCTGCGTTATCATGAGAGATG
FY440529       --> AGTGTTTGGAGAGTTTGGAGTGACGACTAGCTGCGTTATCATGAGAGATG
FD541562       --> ...........................gAGCTGCGTTATCATGAGAGATG
EY914224       --> ..................................................
EW724867       --> ..................................................
FD941623       --> ..................................................
EV569755       --> ..................................................
EV569987       --> ..................................................
EY898014       --> ..................................................
EX888714       --> ..................................................
FY449806       --> ..................................................
FD568614       --> ..................................................

               651    -    701
UN07170        --> GGGAAGGCAAGTCTAAAGGCTTTGGATTTGTCAATTTCGAGAATGCAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574395       <-- ..................................................
EV574221       <-- ..................................................
EW730192       <-- ..................................................
EY910311       <-- ..................................................
FD537815       <-- ..................................................
FD572932       <-- ..................................................
EY894186       <-- ..................................................
FD535408       --> GGGAAGGCAAGTCTAAAGGCTTTGGATTTGTCAATTTCGAGAATGCAGAA
FD945865       --> GGGAAGGCAAGTCTAAAGGCTTTGGATTTGTCAATTTCGAGAATGCAGAA
FY440529       --> GGGAAGGCAAGTCTAAAGGCTTTGGATTTGTCAATTTCGAGAATGCAGAA
FD541562       --> GGGAAGGCAAGTCTAAAGGCTTTGGATTTGTCAATTTCGAGAATGCAGAA
EY914224       --> .....................................gGAGAATGCAGAA
EW724867       --> ..................................................
FD941623       --> ..................................................
EV569755       --> ..................................................
EV569987       --> ..................................................
EY898014       --> ..................................................
EX888714       --> ..................................................
FY449806       --> ..................................................
FD568614       --> ..................................................

               701    -    751
UN07170        --> GACGCAGCCAAAGCTGTTGAGGCTCTCAATGGAAAGACCTTTGACGACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574395       <-- ..................................................
EV574221       <-- ..................................................
EW730192       <-- ..................................................
EY910311       <-- ..................................................
FD537815       <-- ..................................................
FD572932       <-- ..................................................
EY894186       <-- ..................................................
FD535408       --> GACGCAGCCAAAGCTGTT................................
FD945865       --> GACGCAGCCAAAGCTGTTGAGGCTCTCAATGGAAAGACCTTTGACGACAA
FY440529       --> GACGCAGCCAAAGCTGTTGAGGCTCTCAATGGAAAGACCTTTGACGACAA
FD541562       --> GACGCAGCCAAAGCTGTTGAGGCTCTCAATGGAAAGACCTTTGACGACAA
EY914224       --> GACGCAGCCAAAGCTGTTGACTCTCTCAATGGAAAGACCTTTGACGACAA
EW724867       --> .............gTGTTGAGGCTCTCAATGGAAAGACCTTTGACGACAA
FD941623       --> ........................................agggCGACAA
EV569755       --> ..................................................
EV569987       --> ..................................................
EY898014       --> ..................................................
EX888714       --> ..................................................
FY449806       --> ..................................................
FD568614       --> ..................................................

               751    -    801
UN07170        --> GGAGTGGTTTGTCGGAAGAGCTCAGAAGAAGTCAGAGAGGGAAAACGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574395       <-- ..................................................
EV574221       <-- ..................................................
EW730192       <-- ..................................................
EY910311       <-- ..................................................
FD537815       <-- ..................................................
FD572932       <-- ..................................................
EY894186       <-- ..................................................
FD535408       --> ..................................................
FD945865       --> GGAGTGGTTTGTCGGAAGAGCTCAGAAGAAGTCAGAGAGGGAAAACGAAC
FY440529       --> GGAGTGGTTTGTCGGAAGAGCTCAGAAGAAGTCAGAGAGGGAAAACGAAC
FD541562       --> GGAGTGGTTTGTCGGAAGAGCTCAGAAGAAGTTAGAGAGGGAAAACGAAC
EY914224       --> GGAGTGGTTTGTCGGAAGAGCTCAGAAGAAGTCAGAGAGGGAAAACGAAC
EW724867       --> GGGGTGGTTTGTCGGAAGAGCTCAGAAGAAGTCAGAGAGGGAAAACGAAC
FD941623       --> GGAGTGGTTTGTCGGAAGAGCTCAGAAGAAGTCAGAGAGGGAAAACGAAC
EV569755       --> ................gGAGCTCAGAA--AG-CAGAGAGGGAAAACGAAC
EV569987       --> ................gGAGCTCAGAA--AG-CAGAGAGGGAAAACGAAC
EY898014       --> ................gGAGCTCAAAAGAAGTCAGAGAGGGAAAACGAAC
EX888714       --> ..................................................
FY449806       --> ..................................................
FD568614       --> ..................................................

               801    -    851
UN07170        --> TCAAACAAAAGTATGAGCAGAGTTTAAAGGAGGCTGCAGACAAGTCTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574395       <-- ..................................................
EV574221       <-- ..................................................
EW730192       <-- ..................................................
EY910311       <-- ..................................................
FD537815       <-- ..................................................
FD572932       <-- ..................................................
EY894186       <-- ..................................................
FD535408       --> ..................................................
FD945865       --> TCAAACAAAAGTATGAGCAGAGTTTAAAGGAGGCTGCAGACGAGTCTCAG
FY440529       --> TCAAACAAAAGTATGAGCAGAGTTTAAAGGAGGCTGCAGACAAGTCTCAG
FD541562       --> TCAAACAAAAGTATGAGCAGAGTTTAAAGGAGGCTGCAGACAAGTCTCAG
EY914224       --> TCAAACAAAAGTATGAGCAGAGTTTAAAGGAGGCTGCAGACAAGTCTCAG
EW724867       --> TCAAACAAAAGTATGAGCAGAGTTTAAAGGAGGCTGCAGACAAGTCTCAG
FD941623       --> TCAAACAAAAGTATGAGCAGAGTTTAAAGGAGGCTGCAGACAAGTCTCAG
EV569755       --> TCAAACAAAAGTATGAGCAGAGTTTAAAGGAGGCTGCAGACAAGTCTCAG
EV569987       --> TCAAACAAAAGTATGAGCAGAGTTTAAAGGAGGCTGCAGACAAGTCTCAG
EY898014       --> TCAAACAAAAGTATGAGCGGAGTTTAAATGAGGCTGCAGACAAGTCTCAG
EX888714       --> ..................................................
FY449806       --> ..................................................
FD568614       --> ..................................................

               851    -    901
UN07170        --> GGGTCCAACTTGTATGTTAAGAACTTGGATGAGTCTGTCACAGATGAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574395       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV574221       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW730192       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY910311       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537815       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD572932       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY894186       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD535408       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD945865       --> GGGTCCAACTTGTATGTTAAGAACTTGGATGAGTCTGTCACAGACGAGAA  Raphanus sativus cv Early Scarlet Globe
FY440529       --> GGGTCCAACTTGTATGTTAAGAACTTGGATGAGTCTGTCACAGATGAGAA  Raphanus sativus cv GSK3-1
FD541562       --> GGGTCCAACTTGTATGTTAAGAACTTGGATGAGTCTGTCACAGACGAGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY914224       --> GGGTCCAACTTGTATGTTAAGAACTTGGATGAGTCTGTCACAGATGAGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW724867       --> GGGTCCAACTTGTATGTTAAGAACTTGGATGAGTCTGTCACAGACGAGAA  Raphanus sativus cv Early Scarlet Globe
FD941623       --> GGGTCCAACTTGTATGTTAAGAACTTGGATGAGTCTGTCACAGATGAGAA  Raphanus sativus var. oleiformis
EV569755       --> GGGTCCAACTTGTATGTTAAGAACTTGGATGAGTCTGTCACTGATGAGAA  Raphanus raphanistrum subsp. landra
EV569987       --> GGGTCCAACTTGTATGTTAAGAACTTGGATGAGTCTGTCACTGATGAGAA  Raphanus raphanistrum subsp. landra
EY898014       --> GGGTCCAACTTGTATGTTAAGAACTTGGATGAGTCTGTCACAGACGAGAA  Raphanus raphanistrum subsp. maritimus
EX888714       --> ..................................................  Raphanus sativus var. oleiformis
FY449806       --> ..................................................  Raphanus sativus cv GSK3-1
FD568614       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               901    -    951
UN07170        --> GCTCAAAGAACATTTTGCTCCCTTTGGAACTATTACATCATGCAAGGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574395       <-- ..................................................
EV574221       <-- ..................................................
EW730192       <-- ..................................................
EY910311       <-- ..................................................
FD537815       <-- ..................................................
FD572932       <-- ..................................................
EY894186       <-- ..................................................
FD535408       --> ..................................................
FD945865       --> GCTCAAAGAACATTTTGCTCCCTTTGGAACTATTACATCAT-CAAGGTGA
FY440529       --> GCTCAAAGAACATTTTGCTCCCTTTGGAACTATTACATCATGCAAGGTGA
FD541562       --> GCTCAAAGAACATTTTGCTCCCTTTGGAACTATTACATCATGCAAGGTGA
EY914224       --> GCTCAAAGAACATTTTGCTCCCTTTGGAACTATTACATCATGCAAGGTGA
EW724867       --> GCTCAAAGAACATTTTGCTCCCTTTGGAACTATTACATCATGCAAGGTGA
FD941623       --> GCTCAAAGAACATTTTGCTCCCTTTGGAACTATTACATCATGCAAGGTGA
EV569755       --> GCTCAAAGAACATTTTGCTCCCTTTGGAACTATTACATCATGCAAGGTGA
EV569987       --> GCTCAAAGAACATTTTGCTCCCTTTGGAACTATTACATCATGCAAGGTGA
EY898014       --> GCTCAAAGAACATTTTGCTCCCTTTGGAACTATTACATCATGCAAGGTGA
EX888714       --> ...............gGCTCCCTTTGGAACTATTACATCATGCAAGGTGA
FY449806       --> ..................................................
FD568614       --> ..................................................

               951    -   1001
UN07170        --> TGCGTGACCCTACTGGAGTGAGTAGAGGATCTGGTTTTGTGGCATTCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574395       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV574221       <-- ..................................................  Raphanus raphanistrum subsp. landra
EW730192       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY910311       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537815       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD572932       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY894186       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD535408       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD945865       --> TGCGTGACCCTACTGGAGTGAGTAGAGGATCTGGATTTGTGGCATTCTCA  Raphanus sativus cv Early Scarlet Globe
FY440529       --> TGCGTGACCCTACTGGAGTGAGTAGAGGATCTGGTTTTGTGGCATTCTCA  Raphanus sativus cv GSK3-1
FD541562       --> TGCGTGACCCTACTGGAGTGAGTAGGGGATCTGGATTTGTGGCATTCTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY914224       --> TGCGTGACCCTACTGGAGTGAGTAGAGGATCTGGTTTTGTGGCATTCTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW724867       --> TGCGTGACCCTACTGGAGTGAGTAGAGGATCTGGATTTGTGGCATTCTCA  Raphanus sativus cv Early Scarlet Globe
FD941623       --> TGCGTGACCCTACTAGAGTGAGTAGAGGATCTGGTTTTGTGGCATTCTCA  Raphanus sativus var. oleiformis
EV569755       --> TGCGTGACCCTACTGGAGTGAGTAGAGGATCTGGATTTGTGGCATTCTCA  Raphanus raphanistrum subsp. landra
EV569987       --> TGCGTGACCCTACTGGAGTGAGTAGAGGATCTGGATTTGTGGCATTCTCA  Raphanus raphanistrum subsp. landra
EY898014       --> TGCGTGACCCTACTGGAGTGAGTAGAGGATCTGGTTTTGTGGCATTCTCA  Raphanus raphanistrum subsp. maritimus
EX888714       --> TGCGTGACCCTACTGGAGTGAGTAGAGGATCTGGTTTTGTGGCATTCTCA  Raphanus sativus var. oleiformis
FY449806       --> ..................................................  Raphanus sativus cv GSK3-1
FD568614       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               1001   -   1051
UN07170        --> ACTCCTGAGGAAGCATCTAGAGCTATTGCGGAGATGAATGGTAAAATGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574395       <-- ..................................................
EV574221       <-- ..................................................
EW730192       <-- ..................................................
EY910311       <-- ..................................................
FD537815       <-- ..................................................
FD572932       <-- ..................................................
EY894186       <-- ..................................................
FD535408       --> ..................................................
FD945865       --> ACTCCTGAGGAAGCATCTAGAGCTATTGCGGAGATGAATGGTAAAATGAT
FY440529       --> ACTCCTGAGGAAGCATCTAGAGCTATTGCGGAGATGAATGGTAAAATGAT
FD541562       --> ACTCCTGAGGAAGCATCTAGAGCTATTGCGGAGATGAATGGTAAAATGAT
EY914224       --> ACTCCTGAGGAAGCATCTAGAGCTATTGCGGAGATGAATGGTAAAATGAT
EW724867       --> ACTCCTGAGGAAGCATCTAGAGCTATTGCGGAGATGAATGGTAAAATGAT
FD941623       --> ACTCCTGAGGAAGCATCTAGAGCTATTGCGGAGATGAATGGTAAAATGAC
EV569755       --> ACTCCTGAGGAAGCATCTAGAGCTATTGCTGAGATGAATGGTAAAATGAT
EV569987       --> ACTCCTGAGGAAGCATCTAGAGCTATTGCTGAGATGAATGGTAAAATGAT
EY898014       --> ACTCCTGAGGAAGCATCTAGAGCTATTGCTGAGATGAATGGTAAAATGAT
EX888714       --> ACTCCTGAGGAAGCATCTAGAGCTATTGCGGAGATGAATGGTAAAATGAT
FY449806       --> ..................................................
FD568614       --> ..................................................

               1051   -   1101
UN07170        --> TGTCTCAAAGCCTCTCTATGTCGCTCTTGCACAGAGGAAAGAAGACCGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574395       <-- ...................GTCGCTCTTGCACAGAGGAAAGAAGGCCGCA
EV574221       <-- ..................................................
EW730192       <-- ..................................................
EY910311       <-- ..................................................
FD537815       <-- ..................................................
FD572932       <-- ..................................................
EY894186       <-- ..................................................
FD535408       --> ..................................................
FD945865       --> TGTCTCAA-GCCTCTCTATGTCGCTCTTGCACA.................
FY440529       --> TGTCTCAAAGCCTCTCTATGTCGCTCTTGCACAGAGGAAAGAAGACCGCA
FD541562       --> TGTCTCAAAGCCTCTCTATGTCGCTCTTGCACAGAGGAAAGAAGACCGCA
EY914224       --> TGTCTCAAAGCCTCTCTATGTCGCTCTTGCACAGAGGAAAGAAGACCGCA
EW724867       --> TGTCTCAAAGCCTCTCTATGTCGCTCTTGCACAGAGGAAAGAAGACCGCA
FD941623       --> TGTCTCAAAGCCTCTCTATGTCGCTCTTGCACAGAGGAAAGAAGACCGCA
EV569755       --> TGTCTCAAAGCCTCTCTATGTCGCTCTTGCACAGAGGAAAGAAGGCCGCA
EV569987       --> TGTCTCAAAGCCTCTCTATGTCGCTCTTGCACAGAGGAAAGAAGGCCGCA
EY898014       --> TGTCTCAAAGCCTCTCTATGTCGCTCTTGCACAGAGGAAAGAAGACCGCA
EX888714       --> TGTCTCAAAGCCTCTCTATGTCGCTCTTGCACAGAGGAAAGAAGACCGCA
FY449806       --> ..................................................
FD568614       --> ..................................................

               1101   -   1151
UN07170        --> AAGCTAGGTTACAGGCTCAATTTTCACAGATGAGGCCAGTACCTGCGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574395       <-- AAGCTAGGTTACAGGCTCAATTTTCACAGATGAGGCCAGTAC-TGCGGTT
EV574221       <-- .......GTTACAGGCTCAATTTTCACAGATGAGGCCAGTAC-TGCGGTT
EW730192       <-- ..................................................
EY910311       <-- ..................................................
FD537815       <-- ..................................................
FD572932       <-- ..................................................
EY894186       <-- ..................................................
FD535408       --> ..................................................
FD945865       --> ..................................................
FY440529       --> AAGCTAGGTTACAGGCTCAATTTTCACAGATGAGGCCAGTACCTGCGGTT
FD541562       --> AAGCTAGGTTACAGGCTCAATTTTCACAGATGAGGCCAGTACCTGCGGTT
EY914224       --> AAGCTAGGTTACAGGCTCAATTTTCACAGATGAGGCCAGTACCTGCGGTT
EW724867       --> AAGCTAGGTTACAGGCTCAATTTTCACAGATGAGGCCAGTACCTGCGGTT
FD941623       --> AGGCTAGGTTACAGGCTCAATTTTCACAGATGAGGCCAGTACCTGCGGTT
EV569755       --> AAGCTAGGTTACAGGCTCAATTTTCACAGATGAGGCCAGTACCTGCGGTT
EV569987       --> AAGCTAGGTTACAGGCTCAATTTTCACAGATGAGGCCAGTACCTGCGGTT
EY898014       --> AAGCTAGGTTACAGGCTCAATTTTCACAGATGAGGCCAGTACCTGCGGTT
EX888714       --> AAGCTAGGTTACAGGCTCAATTTTCACAGATGAGGCCAGTACCTGCGGTT
FY449806       --> ..................................................
FD568614       --> ..................................................

               1151   -   1201
UN07170        --> GGTCCAAGGATGCCAATGTATCCACCAGGTGGTCCACCAATGGGTCAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574395       <-- GGCCCAAGGATGCCAATGTATCCACCAGGTGGTCCACCAATGGGTCAACA  Raphanus raphanistrum subsp. landra
EV574221       <-- GGCCCAAGGATGCCAATGTATCCACCAGGTGGTCCACCAATGGGTCAACA  Raphanus raphanistrum subsp. landra
EW730192       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY910311       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537815       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD572932       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY894186       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD535408       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD945865       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY440529       --> GGTCCAAGGATGCCAATGTATCCACCAGGTGGTCCACCAATGGGTCAACA  Raphanus sativus cv GSK3-1
FD541562       --> GGTCCAAGGATGCCAATGTATCCACCAGGTGGTCCACCAATGGGTCAACA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY914224       --> GGTCCAAGGATGCCAATGTATCCACCAGGTGGTCCACCAATGGGTCAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW724867       --> GGCCCAAGGATGCCAATGTATCCACCAGGTGGTCCACCAATGGGTCAACA  Raphanus sativus cv Early Scarlet Globe
FD941623       --> GGTCCAAGGATGCCAATGTATCCACCAGGTGGTCCACCAATGGGTCAACA  Raphanus sativus var. oleiformis
EV569755       --> GGCCCAAGGATGCCAATGTATCCACCAGGTGGTCCACCAATGGGTCAACA  Raphanus raphanistrum subsp. landra
EV569987       --> GGCCCAAGGATGCCAATGTATCCACCAGGTGGTCCACCAATGGGTCAACA  Raphanus raphanistrum subsp. landra
EY898014       --> GGTCCAAGGATGCCAATGTATCCACAAGGTGGTCCACCAATGGGTCAACA  Raphanus raphanistrum subsp. maritimus
EX888714       --> GGTCCAAGGATGCCGATGTATCCACCAGGTGGTCCACCAATGGGTCAACA  Raphanus sativus var. oleiformis
FY449806       --> ..................................................  Raphanus sativus cv GSK3-1
FD568614       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               1201   -   1251
UN07170        --> ACTCTTCTATGGCCAAGGACCTCCTGCTATGATTCCTCCTCAGCCTGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574395       <-- ACTCTTCTATGGCCGAGGACCTCCTGCTATGATTCCTCCTCAGCCTGGAT  Raphanus raphanistrum subsp. landra
EV574221       <-- ACTCTTCTATGGCCGAGGACCTCCTGCTATGATTCCTCCTCAGCCTGGAT  Raphanus raphanistrum subsp. landra
EW730192       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY910311       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537815       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD572932       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY894186       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD535408       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD945865       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY440529       --> ACTCTTCTA.........................................  Raphanus sativus cv GSK3-1
FD541562       --> ACTCTTCTATGGCCAAGGACCTCCTGCTATGATTCCTCCTCAGCCTGGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY914224       --> ACTCTTCTATGGCCAAGGACCTCCTGCTATGATTCCTCCTCAGCCTGGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW724867       --> ACTCTTCTATGGCCAAGGTCCTCCTGCTATGATTCCTCCTCAGCCTGGAT  Raphanus sativus cv Early Scarlet Globe
FD941623       --> ACTCTTCTATGGCCAAGGACCTCCTGCTATGATTCCTCCTCAGCCTGGAT  Raphanus sativus var. oleiformis
EV569755       --> ACTCTTCTATGGCCGAGGACCTCCTGCTATGATTCCTCCTCAGCCTGGAT  Raphanus raphanistrum subsp. landra
EV569987       --> ACTCTTCTATGGCCGAGGACCTCCTGCTATGATTCCTCCTCAGCCTGGAT  Raphanus raphanistrum subsp. landra
EY898014       --> ACTCTTCTATGGCCAAGGACCTCCTGCTATGCTTCCTCCTCAGCCTGGAT  Raphanus raphanistrum subsp. maritimus
EX888714       --> ACTCTTCTATGGCCAAGGACCTCCTGCTATGATTCCTCCTCAGCCTGGAT  Raphanus sativus var. oleiformis
FY449806       --> .....................................agctgttgttGAT  Raphanus sativus cv GSK3-1
FD568614       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               1251   -   1301
UN07170        --> ACGGGTATCAACAACAGCTTGTGCCGGGCATGAGACCTGGTGGGGCACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574395       <-- ACGGGTATCAACAACAGCTTGTGCCGGGCATGAGACCTGGTGTGGCACCA  Raphanus raphanistrum subsp. landra
EV574221       <-- ACGGGTATCAACAACAGCTTGTGCCGGGCATGAGACCTGGTGTGGCACCA  Raphanus raphanistrum subsp. landra
EW730192       <-- ............................CATGAGACCTGGTGGGGCACCA  Raphanus sativus cv Early Scarlet Globe
EY910311       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD537815       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD572932       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY894186       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD535408       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD945865       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FY440529       --> ..................................................  Raphanus sativus cv GSK3-1
FD541562       --> ATGGGTATCAACAACAGCTTGTGCCGGGttgagactgtgggcacatgcaa  Raphanus raphanistrum subsp. raphanistrum (MS)
EY914224       --> ACGGGTATCAACAACAGCTTGTACCGGGCATGAGACCTGGTGGGGCACCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW724867       --> ACGGGTATCAACAACAGCTTGTACCGGGCATGAGACCTGGTGGGGCACCA  Raphanus sativus cv Early Scarlet Globe
FD941623       --> ACGGGTATCAACAACAGCTTGTACCGGGCATGAGACCTGGTGGGGCACCG  Raphanus sativus var. oleiformis
EV569755       --> ACGGGTATCAACAACAGCTTGTGCCGGGCATGAGACCTGGTGTGGCACCA  Raphanus raphanistrum subsp. landra
EV569987       --> ACGGGTATCAACAACAGCTTGTGCCGGGCATGAGACCTGGTGTGGCACCA  Raphanus raphanistrum subsp. landra
EY898014       --> ATGGGTATCAACAACAGCTTGTGCCGGGCATGAGACCTGGTGGGGCACCA  Raphanus raphanistrum subsp. maritimus
EX888714       --> ACGGGTATCAACAACAGCTTGTACCGGGCATGAGACCTGGTGGGGCACCG  Raphanus sativus var. oleiformis
FY449806       --> ACCCGTATCCACAACAGCTTGTACCGGGCATGAGACCTGGTGGGGCACCG  Raphanus sativus cv GSK3-1
FD568614       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               1301   -   1351
UN07170        --> ATGCCAAACTTCTTCATGCCTATGATGCAACAAGGCCAGCAACAACAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574395       <-- ATGCCAAACTTCTTCATGCCTATGATGCAACAAGGCCAGCAACAACAGCA
EV574221       <-- ATGCCAAACTTCTTCATGCCTATGATGCAACAAGGCCAGCAACAACAGCA
EW730192       <-- ATGCCAAACTTCTTCATGCCTATGATGCAACAAGGCCAGCAACAACAGCA
EY910311       <-- ..................................................
FD537815       <-- ..................................................
FD572932       <-- ..................................................
EY894186       <-- ..................................................
FD535408       --> ..................................................
FD945865       --> ..................................................
FY440529       --> ..................................................
FD541562       --> ctct..............................................
EY914224       --> ATGCCGAACTTCTTCATGCCTATGATGCAA....................
EW724867       --> ATGCCAAACTTCTTCATGCCTATGATGCAACAAGGCCAGCAACAACAGCA
FD941623       --> ATGCCAAACTTCTTCATGCCTATGATGCAAC...................
EV569755       --> ATGCCAAACTTCTTCATGCCTATGATGCAACAAGGCCAGCAACAACAGCA
EV569987       --> ATGCCAAACTTCTTCATGCCTATGATGCAACAAGGCCAGCAACAACAGCA
EY898014       --> ATGCCAAACTTCTTCATGCCTATGATGCA.....................
EX888714       --> ATGCCAAACTT--TCATGCCTATGATGCAACAAGGCCAGCAACAACAGCA
FY449806       --> ATGCCAAACTTCTTCATGCCTATGATGCAACAAGGCCAGCAACAACAGCA
FD568614       --> ..................................................

               1351   -   1401
UN07170        --> GCAGCAACGACCTGGTGGTGGTAGAAGAGGAGGAGCTCTTCCACAACCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574395       <-- GCAGCAACGACCTGGTGGTGGTAGAAGAGGAGGAGCTCTTCCACAACCAC
EV574221       <-- GCAGCAACGACCTGGTGGTGGTAGAAGAGGAGGAGCTCTTCCACAACCAC
EW730192       <-- GCAGCAACGACCTGGTGGTGGTAGAAGAGGAGGAGCTCTTCCACAACCAC
EY910311       <-- ..................................................
FD537815       <-- ..................................................
FD572932       <-- ..................................................
EY894186       <-- ..................................................
FD535408       --> ..................................................
FD945865       --> ..................................................
FY440529       --> ..................................................
FD541562       --> ..................................................
EY914224       --> ..................................................
EW724867       --> GCAGCAACGACCTGGTGGTGGTAGAAGAGGAGGAGCTCTTCCACAACCAC
FD941623       --> ..................................................
EV569755       --> GCAGCAACGACCTGGTGGTGGTAGAAGAGGAGGAGCTCTTCCACAACCAC
EV569987       --> GCAGCAACGACCTGGTGGTGGTAGAAGAGGAGGAGCTCTTCCACAACCAC
EY898014       --> ..................................................
EX888714       --> GCAGCAACGACCTGGTGGTGGTAGAAGAGGAGGAGCTCTTCCACAACCAC
FY449806       --> GCAGCAACGACCTGGTGGTGGTAGAAGAGGAGGAGCTCTTCCACAACCAC
FD568614       --> ...............................................gAC

               1401   -   1451
UN07170        --> AACAACCTTCTCCTATGATGCAGCCACAGCAGATGCATCCAAGGGGTAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574395       <-- AACAACCTTCTCCTATGATGCAGCCACAGCAGATGCATCCAAGGGGTAGA
EV574221       <-- AACAACCTTCTCCTATGATGCAGCCACAGCAGATGCATCCAAGGGGTAGA
EW730192       <-- AACAACCTTCTCCTATGATGCAGCCACAGCAGATGCATCCAAGGGGTAGA
EY910311       <-- ................GATGCAGCCACAGCAGATGCATCCAAGGGGTAGA
FD537815       <-- ..................................................
FD572932       <-- ..................................................
EY894186       <-- ..................................................
FD535408       --> ..................................................
FD945865       --> ..................................................
FY440529       --> ..................................................
FD541562       --> ..................................................
EY914224       --> ..................................................
EW724867       --> AACAACCTTCTCCTATGATGCAGCCACAGCAGATGCATC...........
FD941623       --> ..................................................
EV569755       --> AACAACCTTCTCCTATGATGCAGCCACAGCAGATGCATCC..........
EV569987       --> AACAACCTTCTCCTATGATGCAGCCACAGCAGATGCATCCAAGGGGTAGA
EY898014       --> ..................................................
EX888714       --> AACAACCTTCTCCTATGATGCAGCCACAGCAGATGCATCCAAGGGGTAGA
FY449806       --> AACAACCTTCTCCTATGATGCAGCCACAGCAGATGCATCCAAGGGGTAGA
FD568614       --> AACAACCTTCTCCTATGATGCAGCCACAGCAGATGCATCCAAGGGGTAGA

               1451   -   1501
UN07170        --> ATGTATAGGTATCCACAGAGAGATGTAAACCCAATGCCTGGTCTTACTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574395       <-- ATGTATAGGTATCCACAGAGAGATGTAAACCCAATGCCTGGTCTTACTCC
EV574221       <-- ATGTATAGGTATCCACAGAGAGATGTAAACCCAATGCCTGGTCTTACTCC
EW730192       <-- ATGTATAGGTATCCACAGAGAGATGTAAACCCAATGCCTGGTCTTACTCC
EY910311       <-- ATGTATAGGTATCCACAGAGAGATGTAAACCCAATGCCTGGTCTTACTCC
FD537815       <-- ...............................................TCC
FD572932       <-- ..................................................
EY894186       <-- ..................................................
FD535408       --> ..................................................
FD945865       --> ..................................................
FY440529       --> ..................................................
FD541562       --> ..................................................
EY914224       --> ..................................................
EW724867       --> ..................................................
FD941623       --> ..................................................
EV569755       --> ..................................................
EV569987       --> ATGTATAGGTATCCACAGAGAGATGTAAACCCAATGCCTGGTCTTACTCC
EY898014       --> ..................................................
EX888714       --> ATGTATAGGTATCCACAGAGAGATGTAAACCCAATGCCTGGTCTTACTCC
FY449806       --> ATGTATAGGTATCCACAGAGAGATGTAAACCCAATGCCTGGTCTTACTCC
FD568614       --> ATGTATAGGTATCCACAGAGAGATGTAAACCCAATGCCTGGTCTTACTCC

               1501   -   1551
UN07170        --> AAACATGCTTTCTGTCCCATATGACGTGTCTGGTGGTGCTCATCTTCGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574395       <-- AAACATGCTTTCTGTCCCATATGACGTGTCTGGTGGTGCTCATCTTCGTG
EV574221       <-- AAACATGCTTTCTGTCCCATATGACGTGTCTGGTGGTGCTCATCTTCGTG
EW730192       <-- AAACATGCTTTCTGTCCCATATGACGTGTCTGGTGGTGCTCATCTTCGTG
EY910311       <-- AAACATGCTTTCTGTCCCATATGACGTGTCTGGTGGTGCTCATCTTCGTG
FD537815       <-- AAACATGCTTTCTGTCCCATATGACGTGTCTGGTGGTGCTCATCTTCGTG
FD572932       <-- ............................................TTCGTG
EY894186       <-- ...............................................GTG
FD535408       --> ..................................................
FD945865       --> ..................................................
FY440529       --> ..................................................
FD541562       --> ..................................................
EY914224       --> ..................................................
EW724867       --> ..................................................
FD941623       --> ..................................................
EV569755       --> ..................................................
EV569987       --> AAACATGCTTTCTGTCCCATATGACGTGTCTGGTGGTGCTCATCTTCGTG
EY898014       --> ..................................................
EX888714       --> AAACATGCTTTCTGTCCCATATGACGTGTCTGGTGGTGCTCATCTTCGTG
FY449806       --> AAACATGCTTTCTGTCCCATATGACGTGTCTGGTGGTGCTCATCTTCGTG
FD568614       --> AAACATGCTTTCTGTCCCATATGGCGTGTCTGGTGGTGCTCATCTTCGTG

               1551   -   1601
UN07170        --> ATTCACCTGCTGCTTCTCAACCTGTTCCTATTGGAGCTTTGGCTACATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574395       <-- ATTCACCTGCTGCTTCTCAACCTGTTCCTATTGGAGCTTTGGCTACATCA
EV574221       <-- ATTCACCTGCTGCTTCTCAACCTGTTCCTATTGGAGCTTTGGCTACATCA
EW730192       <-- ATTCACCTGCTGCTTCTCAACCTGTTCCTATTGGAGCTTTGGCTACATCA
EY910311       <-- ATTCACCTGCTGCTTCTCAACCTGTTCCTATTGGAGCTTTGGCTACATCA
FD537815       <-- ATTCACCTGCTGCTTCTCAACCTGTTCCTATTACAGCTTTGGCTACATCA
FD572932       <-- ATTCACCTGCTGCTTCTCAACCTGTTCCTATTGGAGCTTTGGCTACATCA
EY894186       <-- ATTCACCTGCTGCTTCTCAACCTGTTCCTGTTGGAGCTTTGGCTACATCA
FD535408       --> ..................................................
FD945865       --> ..................................................
FY440529       --> ..................................................
FD541562       --> ..................................................
EY914224       --> ..................................................
EW724867       --> ..................................................
FD941623       --> ..................................................
EV569755       --> ..................................................
EV569987       --> ATTCACCTGCTGCTTCTCAACCTGTTCCTATTGGAGCTTTGGCTACATCA
EY898014       --> ..................................................
EX888714       --> ATTCACCTGCTGCTTCTCAACCTGTTCCTATTGGAGCTTTGGCTACATCA
FY449806       --> ATTCACCTGCTGCTTCTCAACCTGTTCCTATTGGAGCTTTGGCTACATCA
FD568614       --> ATTCACCTGCTGCTTCTCAACCTGTTCCTATTGGAGCTTTGGCTACATCA

               1601   -   1651
UN07170        --> CTCGCTAATGCAGCTCCGGAGCATCAGAGAACGATGCTTGGTGAGAATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574395       <-- CTCGCTAATGCAGCTCCGGAGCATCAGAGAACGATGCTTGGTGAGAATCT
EV574221       <-- CTCGCTAATGCAGCTCCGGAGCATCAGAGAACGATGCTTGGTGAGAATCT
EW730192       <-- CTCGCTAATGCAGCTCCGGAGCATCAGAGAACGATGCTTGGTGAGAATCT
EY910311       <-- CTCGCTAATGCAGCTCCGGAGCATCAGAGAACGATGCTTGGTGAGAATCT
FD537815       <-- CTCGCTAATGCAGCTCCGGAGCATCAGAGAACGATGCTTGGTGAGAATCT
FD572932       <-- CTCGCTAATGCAGCTCCGGAGCATCAGAGAACGATGCTTGGTGAGAATCT
EY894186       <-- CTCGCTAATGCAGCTCCGGAGCATCAGAGAACGATGCTTGGTGAGAATCT
FD535408       --> ..................................................
FD945865       --> ..................................................
FY440529       --> ..................................................
FD541562       --> ..................................................
EY914224       --> ..................................................
EW724867       --> ..................................................
FD941623       --> ..................................................
EV569755       --> ..................................................
EV569987       --> CTCGCTAATGCAGCTCGGGAGCATCAGAGA-CGATGCTTGGTGAGAtctg
EY898014       --> ..................................................
EX888714       --> CTCGCTAATGCAGCTCCG-AGCATCAGAGAACGATGCTTGGTGAGA-TCT
FY449806       --> CTCGCTAATGCAGCTCCGGAGCATCAGAGAACGATGCTTGGTGAGAATCT
FD568614       --> CTCGCTAATGCAGCTCCGGAGCATCAGAGAACGATGCTTGGTGAGAATCT

               1651   -   1701
UN07170        --> GTACCCACTTGTGGAGCAGCTTGAGCCAGAATCAGCAGCTAAAGTCACGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574395       <-- GTACCCACTTGTGGAGCAGCTTGAGCCAGAATCAGCAGCTAAAGTCACGG
EV574221       <-- GTACCCACTTGTGGAGCAGCTTGAGCCAGAATCAGCAGCTAAAGTCACGG
EW730192       <-- GTACCCACTTGTGGAGCAGCTTGAGCCAGAATCAGCAGCTAAAGTCACGG
EY910311       <-- GTACCCACTTGTGGAGCAGCTTGAGCCAGAATCAGCAGCTAAAGTCACGG
FD537815       <-- GTACCCACTTGTGGAGCAGCTTGAGCCAGAATCAGCAGCTAAAGTCACGG
FD572932       <-- GTACCCACTTGTGGAGCAGCTTGAGCCAGAATCAGCAGCTAAAGTCACGG
EY894186       <-- GTACCCACTTGTGGAGCAGCTTGAGCCAGAATCAGCAGCTAAAGTCACGG
FD535408       --> ..................................................
FD945865       --> ..................................................
FY440529       --> ..................................................
FD541562       --> ..................................................
EY914224       --> ..................................................
EW724867       --> ..................................................
FD941623       --> ..................................................
EV569755       --> ..................................................
EV569987       --> ..................................................
EY898014       --> ..................................................
EX888714       --> GTACCCACTTGTGGAGCAGCTTGAGC-AG-ATCAGCA.............
FY449806       --> GTACCCACTTGTGGAGCAGCTTGAGCCAGAATCAGCAGCTAAAGTCACGG
FD568614       --> GTACCCACTTGTGGAGCAGCTTGAGCCAGAATCAGCAGCTAAAGTCACGG

               1701   -   1751
UN07170        --> GAATGCTTCTTGAAATGGACCAAACCGAAGTACTTCACTTGCTGGAATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574395       <-- GAATGCTTCTTGAAATGGACCAAACCGAAGTACTTCACTTGCTGGAATCT
EV574221       <-- GAATGCTTCTTGAAATGGACCAAACCGAAGTACTTCACTTGCTGGAATCT
EW730192       <-- GAATGCTTCTTGAAATGGACCAAACCGAAGTACTTCACTTGCTGGAATCT
EY910311       <-- GAATGCTTCTTGAAATGGACCAAACCGAAGTACTTCACTTGCTGGAATCT
FD537815       <-- GAATGCTTCTTGAAATGGACCAAACCGAAGTACTTCACTTACTGCAATCT
FD572932       <-- GAATGCTTCTTGAAATGGACCAAACCGAAGTACTTCACTTGCTGGAATCT
EY894186       <-- GAATGCTTCTTGAAATGGACCAAACCGAAGTACTTCACTTGCTGGAATCT
FD535408       --> ..................................................
FD945865       --> ..................................................
FY440529       --> ..................................................
FD541562       --> ..................................................
EY914224       --> ..................................................
EW724867       --> ..................................................
FD941623       --> ..................................................
EV569755       --> ..................................................
EV569987       --> ..................................................
EY898014       --> ..................................................
EX888714       --> ..................................................
FY449806       --> GAATGCTTCTTGAAATGGACCAAACCGAAGTACTTCACTTGCTGGAATCT
FD568614       --> GAATGCTTCTTGAAATGGACCAAACCGAAGTACTTCACTTGCTGGAATCT

               1751   -   1801
UN07170        --> CCTGATGCACTCAAAGCTAAAGTTGCAGAGGCAATGGATGTTCTGAGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574395       <-- CCTGATGCACTCAAAGCTAAAGTTGCAGAGGCAATGGATGTTTTGAGGAG
EV574221       <-- CCTGATGCACTCAAAGCTAAAGTTGCAGAGGCAATGGATGTTTTGAGGAG
EW730192       <-- CCTGATGCACTCAAAGCTAAAGTTGCAGAGGCAATGGATGTTCTGAGGAG
EY910311       <-- CCTGATGCGCTCAAAGCTAAAGTTGCAGAGGCAATGGATGTTCTGAGGAG
FD537815       <-- CCTGATGCACTCAAAGCTAAAGTTGCAGAGGCAATGGATGTTCTGAGGAG
FD572932       <-- CCTGATGCACTCAAAGCTAAAGTTGCAGAGGCAATGGATGTTTTGAGGAG
EY894186       <-- CCTGATGCACTCAAAGCTAAAGTTGTAGAGGCAATGGATTTTTTGAGGAG
FD535408       --> ..................................................
FD945865       --> ..................................................
FY440529       --> ..................................................
FD541562       --> ..................................................
EY914224       --> ..................................................
EW724867       --> ..................................................
FD941623       --> ..................................................
EV569755       --> ..................................................
EV569987       --> ..................................................
EY898014       --> ..................................................
EX888714       --> ..................................................
FY449806       --> CCTGATGCACTCAAAGCTAAAGTTGCAGAGGCAATGGATGTTCTGAGGAG
FD568614       --> CCTGATGCACTCAAAGCTAAAGTTGCAGAGGCAATGGATGTTCTGAGGAG

               1801   -   1851
UN07170        --> TGTAGCTCAGCAGCAGCAAGCTGGTGGTGCAGCTGATCAGTTAGCTTCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574395       <-- TGTAGCTCAGCAGCAGCAAGCTGGTGGTGCAGCTGATCAGTTAGCTTCCC
EV574221       <-- TGTAGCTCAGCAGCAGCAAGCTGGTGGTGCAGCTGATCAGTTAGCTTCCC
EW730192       <-- TGTAGCTCAGCAGCAGCAAGCTGGTGGTGCAGCTGATCAGTTAGCTTCCC
EY910311       <-- TGTAGCTCAGCAGCAGCAAGCTGGTGGTGCAGCTGATCAGTTAGCTTCCC
FD537815       <-- TGTAGCTCAGCAGCAGCAAGCTGGTGGTGCAGCTGATCAGTTAGCTTCCC
FD572932       <-- TGTAGCTCAGCAGCAGCAAGCTGGTGGTGCAGCTGATCAGTTAGCTTCCC
EY894186       <-- TGTAGCTCAGCAGCAGCAAGCTGGTGGTGCAGCTGATCAGTTAGCTTCCC
FD535408       --> ..................................................
FD945865       --> ..................................................
FY440529       --> ..................................................
FD541562       --> ..................................................
EY914224       --> ..................................................
EW724867       --> ..................................................
FD941623       --> ..................................................
EV569755       --> ..................................................
EV569987       --> ..................................................
EY898014       --> ..................................................
EX888714       --> ..................................................
FY449806       --> TGTAGCTCAGCAGCAGCAAGCTGGTGGTGCAGCTGATCAGTTAGCTTCCC
FD568614       --> TGTAGCTCAGCAGCAGCAAGCTGGTGGTGCAGCTGATCAGTTAGCTTCCC

               1851   -   1901
UN07170        --> TGTCTCTTGGAGACAACTAAGTATTTTGTTAGTCTTTATTTTGGCCTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574395       <-- TGTCTCTTGGAGACAACTAAGTATTTTGTTAGTCTTTATTTTGGCCTTGT
EV574221       <-- TGTCTCTTGGAGACAACTAAGTATTTTGTTAGTCTTTATTTTGGCCTTGT
EW730192       <-- TGTCTCTTGGAGACAACTAAGTATTTTGTTAGTCTTTATTTTGGCCTTGT
EY910311       <-- TGTCTCTTGGAGACAACTAAGTATTTTGTTAGTCTTTATTTTGGCCTTGT
FD537815       <-- TGTCTCTTGGAGACAACTAAGTATTTTGTTAGTCTTTATTTTGGCCTTGT
FD572932       <-- TGTCTCTTGGAGACAACTAAGTATTTTGTTAGTCTTTATTTTGGCCTTGT
EY894186       <-- TGTCTCTTGGAGACAACTAAGTATTTTGTTAGTCTTTATTTTGGCCTTGT
FD535408       --> ..................................................
FD945865       --> ..................................................
FY440529       --> ..................................................
FD541562       --> ..................................................
EY914224       --> ..................................................
EW724867       --> ..................................................
FD941623       --> ..................................................
EV569755       --> ..................................................
EV569987       --> ..................................................
EY898014       --> ..................................................
EX888714       --> ..................................................
FY449806       --> TGTCTCTTGGAGACAACTAAGTATTTTGTTAGTCTTTATTTTGGCCTTGT
FD568614       --> TGTCTCTTGGAGACAACTAAATATTTTGTTAGTCTTTATTTTGGCCTTGT

               1901   -   1951
UN07170        --> GGAGAATCAGAAACAAAGAGTGGTTCTTGAAAGTTTTGGATTTCATGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574395       <-- GGAGAATCAGAAACAAAGAGTGGTTCTTGAAAGTTTTGGATTTCATGTTC
EV574221       <-- GGAGAATCAGAAACAAAGAGTGGTTCTTGAAAGTTTTGGATTTCATGTTC
EW730192       <-- GGAGAATCAGAAACAAAGAGTGGTTCTTGAAAGTTTTGGATTTAATGTTC
EY910311       <-- GGAGAATCAGAAACAAAGAGTGGTTCTTGAAAGTTTTGGATTTCATGTTC
FD537815       <-- GGAGAATCAGAAACAAAGAGTGGTTCTTGAAAGTTTTGGATTTCATGTTC
FD572932       <-- GGAGAATCAGAAACAAAGAGTGGTTCTTGAAAGTTTTGGATTTAATGTTC
EY894186       <-- GGAGAATCAGAAACAAAGAGTGGTTCTTGAAAGTTTTGGATTTCATGTTC
FD535408       --> ..................................................
FD945865       --> ..................................................
FY440529       --> ..................................................
FD541562       --> ..................................................
EY914224       --> ..................................................
EW724867       --> ..................................................
FD941623       --> ..................................................
EV569755       --> ..................................................
EV569987       --> ..................................................
EY898014       --> ..................................................
EX888714       --> ..................................................
FY449806       --> GGAGAATCAGAAACAAAGAGTGGTTCTTGAAAGTTTTGGATTTCATGTTC
FD568614       --> G.................................................

               1951   -   2001
UN07170        --> TGTTTTTTTT--CCGAGAGAGCTTTTGAATCTTTAATACTTTGGGAAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574395       <-- g.................................................
EV574221       <-- g.................................................
EW730192       <-- TGTTTTTTTT--CCGAGAGAGCTTTTGAATCTTTAATACTTTGGG.....
EY910311       <-- TGTTTTTTTTTTCCGAGAGAGCTTTTGAATCTTTAATACTTTGGGAAGTT
FD537815       <-- TGTTTTTTTT--CCGAGAGAGCTTTTGAATCTTTAATACTTTGGGAAGTT
FD572932       <-- TGTTTTTTTT--CCGAGAGAGCTTTTGAATCTTTAATACTTTGGGAAGTT
EY894186       <-- TGTTTTTTTT--CCGAGAGAGCTTTTGAATCTTTAATACTTTGGGAAGTT
FD535408       --> ..................................................
FD945865       --> ..................................................
FY440529       --> ..................................................
FD541562       --> ..................................................
EY914224       --> ..................................................
EW724867       --> ..................................................
FD941623       --> ..................................................
EV569755       --> ..................................................
EV569987       --> ..................................................
EY898014       --> ..................................................
EX888714       --> ..................................................
FY449806       --> TGTTTTTTTT-TCCGAGAGAG.............................
FD568614       --> ..................................................

               2001   -   2051
UN07170        --> TTGGATAGTTTCTCTCACCTTGTTATTTATACATTACCCATTTCATAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV574395       <-- ..................................................
EV574221       <-- ..................................................
EW730192       <-- ..................................................
EY910311       <-- TTGGATAGTTTCTCTCACCTTGTTATTTATACA.................
FD537815       <-- TTGGATAGTTTCTCTCACCTTGTTATTTATACA.................
FD572932       <-- TTGGATAGTTTCTCTCACCTTGTTATTTATACATTACCCATTTCATAGAT
EY894186       <-- TTGGATAGTTTCTCT...................................
FD535408       --> ..................................................
FD945865       --> ..................................................
FY440529       --> ..................................................
FD541562       --> ..................................................
EY914224       --> ..................................................
EW724867       --> ..................................................
FD941623       --> ..................................................
EV569755       --> ..................................................
EV569987       --> ..................................................
EY898014       --> ..................................................
EX888714       --> ..................................................
FY449806       --> ..................................................
FD568614       --> ..................................................

               2051   -   2101
UN07170        --> CTTGTTTTGCTTT
                   ~~~~~~~~~~~~~
EV574395       <-- .............
EV574221       <-- .............
EW730192       <-- .............
EY910311       <-- .............
FD537815       <-- .............
FD572932       <-- CTTGTTTTGCTTT
EY894186       <-- .............
FD535408       --> .............
FD945865       --> .............
FY440529       --> .............
FD541562       --> .............
EY914224       --> .............
EW724867       --> .............
FD941623       --> .............
EV569755       --> .............
EV569987       --> .............
EY898014       --> .............
EX888714       --> .............
FY449806       --> .............
FD568614       --> .............