Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN07567

               1      -     51
UN07567        --> GGTATCACTATGCTACATGTCTGAACTTCTCTATATATACAAGCCACATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767714       <-- ..................................................
EX751094       <-- ..................................................
EY918353       <-- ..................................................
EX763660       --> GGTATCACTATGCTACATGTCTGAACTTCTCTATATATACAAGCCACATC
EW734030       --> ..................................................
EY896949       --> ..................................................
EY922381       --> ..................................................
EX746770       --> ..................................................

               51     -    101
UN07567        --> TCATAAAATAAACATAACCCTAACTCTAGAAAACTTCTCCTGATAT----
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767714       <-- ..................................................
EX751094       <-- ..................................................
EY918353       <-- ..................................................
EX763660       --> TCATAAAATAAACATAACCCTAACTCTAGAAAACTTCTCCTGATATATAT
EW734030       --> ...........ggATAACCCTAACTCTAGAAAACTTCTCCTGATATATAT
EY896949       --> ...........ggATAACCCTAACTCTAGAAAACTTCTCCTGATAT----
EY922381       --> ...........ggattACCCTAACTCTAGAAAACTTTTCCTGATAT----
EX746770       --> .....................AACTCTAGAAAACTTCTCCTGATAA----

               101    -    151
UN07567        --> CTCTCTCCCTCTCTCCCAAGTGTGGTTTTCAACCCATTCGTAAAGATCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767714       <-- ..................................................
EX751094       <-- ..................................................
EY918353       <-- ..................................................
EX763660       --> CTCTCTCCCTCTCTCCCAAGTGTGGTTTTCAACCCATTCGTAAAGATCAT
EW734030       --> CTCTCTCCCTCTCTCCCAAGTGTGGTTTTCAACCCATTCGTAAAGATCAT
EY896949       --> CTCTCTCCCTCTCTCCCAAGTGTGGTTTTCAACCCATTCGTAAAGATCAT
EY922381       --> CTCTCTCCCTCTCTCCCAAGTGTGGTTTTCAACCCATTCTTAAAGATCAT
EX746770       --> CTCTCTCCCTCTCTCCCAAGTGTGGTTTTCAACCCATTCGTAAAGATCAT

               151    -    201
UN07567        --> GAACCTTGAAGAGAAACCAACCATGGCTTCAAGGGCTTCACCTCAAGCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767714       <-- ..............................................agtc
EX751094       <-- ..................................................
EY918353       <-- ..................................................
EX763660       --> GAACCTTGAAGAGAAACCAACTATGGCTTCAAGGGCTTCACCTCAAGTCG
EW734030       --> GAACCTTGAAGAGAAACCAACTATGGCTTCAAGGGCTTCACCTCAAGCCG
EY896949       --> GAACCTTGAAGAGAAACCAACCATGGCTTCAAGGGCTTCACCTCAAGCCG
EY922381       --> GAACCTTGAAGAGAAACCAACCATGGCTTCAAGGGCTTCACCTCAAGCCG
EX746770       --> GAACCTTGAAGAGAAACCAACCATGGCTTCAAGGGCTTCACCTCAAGCCG

               201    -    251
UN07567        --> AACATCTCTACTACGTCCGGTGCAGCATCTGCAACACAATCCTCGCGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767714       <-- gACATCTCTACTACGTCCGGTGCAGCATCTGCAACACAATCCTCGCGGTT
EX751094       <-- ..................................................
EY918353       <-- ..................................................
EX763660       --> AACATCTCTACTACGTCCGGTGCAGCATCTGCAACACAATCCTCGCGGTT
EW734030       --> AACATCTCTACTACGTCCGGTGCAGCATCTGCAACACAATCCTCGCGGTT
EY896949       --> AACATCTCTACTACGTCCGGTGCAGCATCTGCAACACAATCCTCGCGGTT
EY922381       --> AACATCTCTACTACGTCCGGTGCAGCATCTGCAACACCATCCTCGCGGTT
EX746770       --> AACATCTCTACTACGTCCGGTGCAGCATCTGCAACACAATCCTCGCGGTT

               251    -    301
UN07567        --> GGGATACCAATGAAGAGAATGCTTGACACTGTAACGGTGAAATGTGGCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767714       <-- GGGATACCAATGAAGAGAATGCTTGACACTGTAACGGTGAAATGTGGCCA
EX751094       <-- .........ATGAAGAGAATGCTTGACACTGTAACGGTGAAATGTGGCCA
EY918353       <-- ..................................................
EX763660       --> GGGATACCAATGAAGAGAATGCTTGACACTGTAACGGTGAAATGTGGCCA
EW734030       --> GGGATACCAATGAAGAGAATGCTTGACACTGTAACGGTGAAATGTGGCCA
EY896949       --> GGGATACCAATGAAGAGAATGCTTGACACTGTAACGGTGAAATGTGGCCA
EY922381       --> GGGATACCAATGAAGAGAATGCTTGACACTGTAACGGTGAAATGTGGCCA
EX746770       --> GGGATACCAATGAAGAGAATGCTTGACACTGTAACGGTGAAATGTGGCCA

               301    -    351
UN07567        --> TTGTGGTAACCTCTCGTTTCTCACCACAAGCCCTCCTCTGCAAGGCCATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767714       <-- TTGTGGTAACCTCTCGTTTCTCACCACAAGCCCTCCTCTGCAAGGCCATG
EX751094       <-- TTGTGGTAACCTCTCGTTTCTCACCACAAGCCCTCCTCTGCAAGGCCATG
EY918353       <-- ..................................................
EX763660       --> TTGTGGTAACCTCTCGTTTCTCACCACAAGCCCTCCTCTGCAAGGCCATG
EW734030       --> TTGTGGTAACCTCTCGTCTCTCACCACAAGCCCTCCTCTGCAAGGCCATG
EY896949       --> TTGTGGTAACCTCTCGTTTCTCACCACAAGCCCTCCTCTGCAAGGCCATG
EY922381       --> TTGTGGTAACCTCTCGTTTCTCACCACAAGCCCTCCTCTGCAAGGCCATG
EX746770       --> TTGTGGTAACCTCTCGTTTCTCACCACAAGCCCTCCTCTGCAAGGCCATG

               351    -    401
UN07567        --> TCAGCCTCACCCTTCAGATGCAGAGCTTTGGTGGGAGTGAGTATAAGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767714       <-- TCAGCCTCACCCTTCAGATGCAGAGCTTTGGTGGGAGTGAGTATAAGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751094       <-- TCAGCCTCACTCTTCAGATGCAGAGCTTTGGTGGGAGTGAGTATAAGAAG  Raphanus raphanistrum subsp. maritimus
EY918353       <-- ....CCTCACCCTTCAGATGCAGAGCTTTGGTGGGAATGAGTATAAGAAG  Raphanus raphanistrum subsp. landra
EX763660       --> TCAGCCTCACCCTTCAGATGCAGAGCTTTGGTGGGAGTGAGTATAAGAAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW734030       --> TCAGCCTCACCCTTCAGATGCAGAGCTTTGGTGGGAGTGAGTATAAGAAG  Raphanus sativus cv Rat-Tail Radish #3870
EY896949       --> TCAGCCTCACTCTTCAGATGCAGAGCTTTGGTGGGAGTGAGTATAAGAAG  Raphanus raphanistrum subsp. maritimus
EY922381       --> TCAGCCTCACCCTTCAGATGCAGAGCTTTGGTGGGAATGAGTATAAGAAG  Raphanus raphanistrum subsp. landra
EX746770       --> TCAGCCTCACTCTTCAGATGCAGAGCTTTGGTGGGAGTGAGTATAAGAAG  Raphanus raphanistrum subsp. maritimus

               401    -    451
UN07567        --> GGAAGCTCTTCTTCCTCCTCGTCTTCTACCTCCAGTGACCAGCCACCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767714       <-- GGAAGCTCTTCTTCCTCCTCGTCTTCTACCTCCAGTGACCAGCCACCATC
EX751094       <-- GGAAGCTCTTCTTCCTCCTCGTCTTCTACCTCCAGTGACCAGCCACCATC
EY918353       <-- GGAAGCTCTTCTTCCTCCTCGTCTTCTACCTCCAGTGACCAGCCGCCGTC
EX763660       --> GGAAGCTCTTCTTCCTCCTCGTCTTCTACCTCCAGTGACCAGCCACCATC
EW734030       --> GGAAGCTCTTCTTCCTCCTCGTCTTCTACCTCCAGTGACCAGCCACCATC
EY896949       --> GGAAGCTCTTCTTCCTCCTCGTC...........................
EY922381       --> GGAAGCTCTTCTTCCTCCTCGTCTTCTACCTCCAGTGACCAGCCGCCGTC
EX746770       --> GGAAGCTCTTCTTCCTCCTCGTCTTCTACCTCCAGTGACCAGCCACCATC

               451    -    501
UN07567        --> TCCTCGACCACCCTTTGTCGTTAAACCTCCTGAGAAGAAGCAGAGACTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767714       <-- TCCTCGACCACCCTTTGTCGTTAAACCTCCTGAGAAGAAGCAGAGACTTC
EX751094       <-- TCCTCGACCACCCTTTGTCGTTAAACCTCCTGAGAAGAAGCAGAGACTTC
EY918353       <-- TCCTAGACCACCCTTTGTCGTTAAACCTCCTGAGAAGAAGCAGAGACTTC
EX763660       --> TCCTCGACCACCCTTTGTCGTTAAACCTCCTGAGAAGAAGCAGAGACTTC
EW734030       --> TCCTCGACCACCCTTTGTCGTTAAACCTCCTGAGAAGAAGCAGAGACTTC
EY896949       --> ..................................................
EY922381       --> TCCTAGACCACCCTTTGTCGTTAAACCTCCTGAGAAGAAGCAGAGACTTC
EX746770       --> TCCTCGACCACCCTTTGTCGTTAAACCTCCTGAGAAGAAGCAGAGACTTC

               501    -    551
UN07567        --> CATCGGCTTACAACCGCTTCATGAGGGATGAGATACAACGCATCAAGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767714       <-- CATCGGCTTACAACCGCTTCATGAGGGATGAGATACAACGCATCAAGAGT
EX751094       <-- CATCGGCTTACAACCGCTTCATGAGGGATGAGATACAACGCATCAAGAGT
EY918353       <-- CATCGGCTTACAACCGCTTCATGAGGGATGAGATACAACGCATCAAGAGT
EX763660       --> CATCGGCTTACAACCGCTTCATGAGGGATGAGATACAACGCATCAAGAGT
EW734030       --> CATCGGCTTACAACCGCTTCATGAGGGATGAGATACAACGCATCAAGAGT
EY896949       --> ..................................................
EY922381       --> CATCGGCTTACAACCGCTTCATGAGGGATGAGATACAACGCATCAAGAGT
EX746770       --> CATCGGCTTACAACCGCTTCATGAGGGATGAGATACAACGCATCAAGAGT

               551    -    601
UN07567        --> GCGAATCCGGAAATACCACATCGTGAAGCTTTCAGCGCTGCTGCCAAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767714       <-- GCGAATCCGGAAATACCACATCGTGAAGCTTTCAGCGCTGCTGCCAAAAA
EX751094       <-- GCGAATCCGGAAATACCACATCGTGAAGCTTTCAGCGCTGCTGCCAAAAA
EY918353       <-- GCGAATCCGGAAATACCACATCGTGAAGCTTTCAGCGCTGCTGCCAAAAA
EX763660       --> GCGAATCCGGAAATACCACATCGTGAAGCTTTCAGCGCTGCTGCCAAAAA
EW734030       --> GCGAATCCGGAAATACCACATCGTGAAGCTTTCAGCGCTGCTGCCAAAAA
EY896949       --> ..................................................
EY922381       --> GCGAATCCGGAAATACCACATCGTGAAGCTTTCAGCGCTGCTGCCAAAAA
EX746770       --> GCGAATCCGGAAATACCACATCGTGAAGCTTTCAGCGCTGCTGCCAAAAA

               601    -    651
UN07567        --> TTGGGCTAAGTACATACCCAATTCTCCTACTTCCATTACTTCCGGAGGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767714       <-- TTGGGCTAAGTACATACCCAATTCTCCTACTTCCATTACTTCCGGAGGCA
EX751094       <-- TTGGGCTAAGTACATACCCAATTCTCCTACTTCCATTACTTCCGGAGGCA
EY918353       <-- TTGGGCTAAGTACATACCCAATTCTCCTACTTCCATTACTTCCGGAGGCA
EX763660       --> TTGGGCTAAGTACATACCCAATTCTCCTACTTCCATTACTTCCGGAGGCA
EW734030       --> TTGGGCTAAGTACATACCCAATTCTCCTACTTCCATTACTTCCGGAGGCA
EY896949       --> ..................................................
EY922381       --> TTGGGCTAAGTACATACCCAATTCTCCTACTTCCATTACTTCCGGAGGCA
EX746770       --> TTGGGCTAAGTACATACCCAATTCTCCTACTTCCATTACTTCCGGAGGCA

               651    -    701
UN07567        --> GCAACATCCACGGTTTCGGATTCGGTGAGAAGAAGTGAAGTCCCCAAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767714       <-- GCAACATCCACGGTTTCGGATTCGGTGAGAAGAAGTGAAGTCCCCAAGGA
EX751094       <-- GCAACATCCACGGTTTCGGATTTGGTGAGAAGAAGTGAAGTCCCCAAGGA
EY918353       <-- GCAACATCCACGGTTTCGGATTCGGTGAGAAGAAGTGAAGTCCCCAAGGA
EX763660       --> GCAACATCCACGGTTTCGGATTCG-TGAGAAGAAGTGAAGTCCCCAAG-A
EW734030       --> GCAACATCCACGGTTTCGGATTCGGTGAGAAGAAGTGAAGTCCCCAAGGA
EY896949       --> ..................................................
EY922381       --> GCAACATCCACGGTTTCGGATTCGGTGAGAAGAAGTGAAGTCCCCAAG-A
EX746770       --> GCAACATCCACGGTTTCGGATTTGGTGAGAAGAAGTGAAGTCCCCAAGGA

               701    -    751
UN07567        --> AATGCATGCCTAAAAATAATAATAAACGCACGTGTGCGTGATCAAACTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767714       <-- AATGCATGCCTAAAAATAATAATAAACGCACGTGTGCGTGATCAAACTTT
EX751094       <-- AATGCATGCCTAAAAATAATAATAAACGCACGTGTGCGTGATCAAACTTT
EY918353       <-- AATGCATGCCTAAAAATAATAATAAACGCACGTGTGCGTGATCAAACTTT
EX763660       --> AATGCATGCCTAAAA-TA-TA-TAAACGCACGTGTGCGTGATCAAACTTT
EW734030       --> AATGCATGCCTAAAA-TAATA-TAAACGCACGTGTGCG-GATCAAACTTT
EY896949       --> ..................................................
EY922381       --> AATGCATGCCTAAAAATAATAATAAACGCACGTGTGCGTGATCAA-CTTT
EX746770       --> AATGCATGCCTAAAA-TAATAATAAACGCACGTGTGCGTGATCAAACTTT

               751    -    801
UN07567        --> TCAGCGAAGGGGTTTAGTTAACGGCGTCGTTTTCGTCATTATGTGTTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767714       <-- TCAGCGAAGGGGTTTAGTTAACGGCGTCGTTTTCGTCATTATGTGTTTTA
EX751094       <-- TCAGCGAAGGGGTTTAGTTAACGGCGTCGTTTTCGTCATTATGTGTTTTA
EY918353       <-- TCAGCGAAGGGGTTTAGTTAACGGCGTCGTTTTCGTCATTATGTGTTTTA
EX763660       --> cagc..............................................
EW734030       --> TCAGCGAAGGGttagt..................................
EY896949       --> ..................................................
EY922381       --> TCA...............................................
EX746770       --> TCAGC.............................................

               801    -    851
UN07567        --> GATGTGTTTAAAGTTGGTGTGTTTTCCTTTGTATGTCTCCGCTGAAGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767714       <-- GATGTGTTTAAAGTTGGTGTGTTTTCCTTTGTATGTCTCCGCTGAAGTGA
EX751094       <-- GATGTGTTTAAAGTTGGTGTGTTTTCCTTTGTATGTCTCCGCAGAAGTGA
EY918353       <-- CATGTGTTTAAAGTTGGTGTGTTTTCCTTTGTATGTCTCAGCTGAAGTGA
EX763660       --> ..................................................
EW734030       --> ..................................................
EY896949       --> ..................................................
EY922381       --> ..................................................
EX746770       --> ..................................................

               851    -    901
UN07567        --> TGTTTGCCTCATAGTAGAATCTTTAGTTCTGTCTGTCTTAGATTTGAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767714       <-- TGTTTGCCTCATAGTAGAATCTTTAGTTCTGTCTGTCTTAGATTTGAAAG
EX751094       <-- TGTTTGCCTCATAGTAGAATCTTTAGTTCTGTCTGTCTTAGATTTGAAAG
EY918353       <-- TGTTTGCCTCATAGTAGAATCTTTAGTTCTGTCTGTCTTAGATTTGAAAG
EX763660       --> ..................................................
EW734030       --> ..................................................
EY896949       --> ..................................................
EY922381       --> ..................................................
EX746770       --> ..................................................

               901    -    951
UN07567        --> CTACGTTACGTTGATGTGTTCATCTGGACGTTCATGTCGGGACGTAATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767714       <-- CTACGTTACGTTGATGTGTTCATCTGGACGTTCATGTCGGGATGTAATAA
EX751094       <-- CTACGTTACGTTGATGTGTTCATCTGGACGTTCATGTCGGGACGTAATAA
EY918353       <-- CTACGTTACGTTGATGTGTTCATCTGGACGTTCATGTCGGGACGTAATAA
EX763660       --> ..................................................
EW734030       --> ..................................................
EY896949       --> ..................................................
EY922381       --> ..................................................
EX746770       --> ..................................................

               951    -   1001
UN07567        --> GTTTGTCTTAATCCTATAACATTTCTGCCGATCTCTCTTGTCTCTAGCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX767714       <-- GTTTGTCTTAATCCTATAACATTTCTGCCG....................
EX751094       <-- GTTTGTCTTAATCCTATAACATTTCTGCCTATCTCTCTTGTCTCTAGCTA
EY918353       <-- GTTTGTCTTAATCCTATAACATTTCTGCCG....................
EX763660       --> ..................................................
EW734030       --> ..................................................
EY896949       --> ..................................................
EY922381       --> ..................................................
EX746770       --> ..................................................

               1001   -   1051
UN07567        --> TCTATCGTACAAATTATTTTC
                   ~~~~~~~~~~~~~~~~~~~~~
EX767714       <-- .....................
EX751094       <-- TCTATCGTACAAATTATTTTC
EY918353       <-- .....................
EX763660       --> .....................
EW734030       --> .....................
EY896949       --> .....................
EY922381       --> .....................
EX746770       --> .....................