1      -     51
UN07665        --> GGGGCGAACAGAACAAACAAACAAACACACAGCCACTGACAAAGAAAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530325       <-- ..................................................
FD555426       <-- ..................................................
EW730958       <-- ..................................................
EV525631       --> GGGGCGAACAGAACAAACAAACAAACACACAGCCACTGACAAAGAAAACT
EW725794       --> ..................................................
FD559776       --> ..................................................
EY937676       --> ..................................................

               51     -    101
UN07665        --> TGAAACACTTCGCACGTCTCTCTGATCTCCGGCGATGAAGAGCCTCGCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530325       <-- ..................................................
FD555426       <-- ..................................................
EW730958       <-- ..................................................
EV525631       --> TGAAACACTTCGCACGTCTCTCTGATCTCCGGCGATGAAGAGCCTCGCGC
EW725794       --> ..................................................
FD559776       --> ..................................................
EY937676       --> ..................................................

               101    -    151
UN07665        --> TTGGCTCTCTCTCCACCACCGCTTCATTCTCCCATCACCACCACCCCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530325       <-- ...................................CACCACCACCCCTCA
FD555426       <-- ..................................................
EW730958       <-- ..................................................
EV525631       --> TTGGCTCTCTCTCCACCACCGCTTCATTCTCCCATCACCACCACCCCTCA
EW725794       --> ..................................................
FD559776       --> ..................................................
EY937676       --> ..................................................

               151    -    201
UN07665        --> CGCATCTCTCTTCTCCGCCGCATCTCATCGAGATCTCCGCCACCAACCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530325       <-- CGCATCTCTCTTCTCCGCCGCATCTCATCGAGATCTCCGCCACCAACCCT
FD555426       <-- ..................................................
EW730958       <-- ..................................................
EV525631       --> CGCATCTCTCTTCTCCGCCGCATCTCATCGAGATCTCCGCCACCAACCCT
EW725794       --> ...............................................ctg
FD559776       --> ..................................................
EY937676       --> ..................................................

               201    -    251
UN07665        --> CTCTCTCCCTTCTCTCCATACTCCTTCTCCTCGGTGTACTTAACTGGGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530325       <-- CTCTCTCCCTTCTCTCCATACTCCTTCTCCTCGGTGTACTTAACTGGGAC
FD555426       <-- ................gATACTC-TTCTCCTCGGTGTACTTAACTGGGAC
EW730958       <-- ..................................................
EV525631       --> CTCTCTCCCTTCTCTCCATACTCCTTCTCCTCGGTGTACTTAACTGGGAC
EW725794       --> caatgatcggTCTCTCCATACTTCTTCTCCTCGGTGTACTTAACTGAGAC
FD559776       --> ................gATACTCCTTCTCCTCGGTGTACTTAACTGGGAC
EY937676       --> ..................................................

               251    -    301
UN07665        --> GATTGCCTTAGCGAAAAATCAGCTTGGGACACGTTAGCTTGGTTCGCGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530325       <-- GATTGCCTTAGCGAAAAATCAGCTTGGGACACGTTAGCTTGGTTCGCGGT
FD555426       <-- GATTGCCTTAGCGAAAAATCAGCTTGGGACACGTTAGCTTGGTTCGCGGT
EW730958       <-- ..................................................
EV525631       --> GATTGCCTTAGCGAAAAATCAGCTTGGGACACGTTAGCTTGGTTCGCGGT
EW725794       --> GATTGCCTTAGCGAAAAATCAGTGTGGGACACGTTAGCTTGGTTCGCGGT
FD559776       --> GATTGCCTTAGCGAAAAATCAGCTTGGGACACGTTAGCTTGGTTCGCGGT
EY937676       --> ..................................................

               301    -    351
UN07665        --> CTTGGTGGGGATGGCAGGACAGCTGACAAGCCTCGGTGTTGTGTCATGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530325       <-- CTTGGTGGGGATGGCAGGACAGCTGACAAGCCTCGGTGTTGTGTCATGGA
FD555426       <-- CTTGGTGGGGATGGCAGGACAGCTGACAAGCCTCGGTGTTGTGTCATGGA
EW730958       <-- ..................................................
EV525631       --> CTTGGTGGGGATGGCAGGACAGCTGACAAGCCTCGGTGTTGTGTCATGGA
EW725794       --> CTTGGTGGGGATGGCGGGACAGCTGACAAGCCTCGGTGTTGTGTCATGGA
FD559776       --> CTTGGTGGGGATGGCAGGACAGCTGACAAGCCTCGGTGTTGTGTCATGGA
EY937676       --> ..................................................

               351    -    401
UN07665        --> TGTCTGATTGCGTAGCCAAAGTTTTGCAGTCTCTCTCATTGAGCTGGCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530325       <-- TGTCTGATTGCGTAGCCAAAGTTTTGCAGTCTCTCTCATTGAGCTGGCCT
FD555426       <-- TGTCTGATTGCGTAGCCAAAGTTTTGCAGTCTCTCTCATTGAGCTGGCCT
EW730958       <-- ..................................................
EV525631       --> TGTCTGATTGCGTAGCCAAAGTTTTGCAGTCTCTCTCATTGAGCTGGCCT
EW725794       --> TGTCTGATTGCGTAGCCAAAGTTTTGCAGTCTCTCTCGTTGAGCTGGCCT
FD559776       --> TGTCTGATTGCGTAGCCAAAGTTTTGCAGTCTCTCTCATTGAGCTGGCCT
EY937676       --> ..................................................

               401    -    451
UN07665        --> GCTGCGTTTGGTCTTCTCCAAGCAGCTTACTTCTTCATTCACTACCTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530325       <-- GCTGCGTTTGGTCCTCTCCAAGCAGCTTACTTCTTCATTCACTACCTTTT
FD555426       <-- GCTGCGTTTGGTCTTCTCCAAGCAGCTTACTTCTTCATTCACTACCTTTT
EW730958       <-- .............TTCTCCAAGCAGCTTACTTCTTCATTCACTACCTTTT
EV525631       --> GCTGCGTTTGGTCCTCTCCAAGCAGCTTACTTCTTCATTCACTACCTTTT
EW725794       --> GCTGCGTTTGGTCTTCTCCAAGCAGCTTACTTCTTCATTCACTACCTTTT
FD559776       --> GCTGCGTTTGGTCTTCTCCAAGCAGCTTACTTCTTCATTCACTACCTTTT
EY937676       --> ...........................gACTTCTTCATTCACTACCTTTT

               451    -    501
UN07665        --> CGCAAGCCAAACGGGTCACGTCGGAGCTCTCTTCTCGGCTTTCTTGGCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530325       <-- CGCAAGCCAAACGGGTCACGTCGGAGCTCTCTTCTCGGCTTTCTTGGCTA  Raphanus raphanistrum subsp. maritimus
FD555426       <-- CGCAAGCCAAACGGGTCACGTCGGAGCTCTCTTCTCGGCTTTCTTGGCTA  Raphanus raphanistrum subsp. landra
EW730958       <-- CGCAAGCCAAACGGGTCACGTTGGAGCTTTCTTTTCGGCTTTCTTGGCTA  Raphanus sativus cv Early Scarlet Globe
EV525631       --> CGCAAGCCAAACGGGTCACGTCGGAGCTCTCTTCTCGGCTTTCTTGGCTA  Raphanus raphanistrum subsp. maritimus
EW725794       --> CGCAAGCCAAACGGGTCACGTTGGAGCTCTCTTCTCGGCTTTCTTGGCTA  Raphanus sativus cv Early Scarlet Globe
FD559776       --> CGCAAGCCAAACGGGTCACGTCGGAGCTCTCTTCTCGGCTTTCTTGGCTA  Raphanus raphanistrum subsp. landra
EY937676       --> CGCAAGCCAAACGGGTCACGTTGGAGCTCTCTTCTCGGCTTTCTTGGCTA  Raphanus sativus cv Early Scarlet Globe

               501    -    551
UN07665        --> TGAATATAGCAGCGGGTGTTCCGGGTGTATTAGCTGCACTTGCGTTGGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530325       <-- TGAATATAGCAGCGGGTGTTCCGGGTGTATTAGCTGCACTTGCGTTGGCG  Raphanus raphanistrum subsp. maritimus
FD555426       <-- TGAATATAGCAGCGGGTGTTCCGGGTGTATTAGCTGCACTTGCGTTGGCG  Raphanus raphanistrum subsp. landra
EW730958       <-- TGAATATAGCAGCGGGTGTTCCAGGGGTATTAGCTGCACTTGCGTTGGCG  Raphanus sativus cv Early Scarlet Globe
EV525631       --> TGAATATAGCAGCGGGTGTTCCGGGTGTATTAGCTGCACTTGCGTTGGCG  Raphanus raphanistrum subsp. maritimus
EW725794       --> TGAATATAGCAGCGGGTGTTCCAGGGGTATTAGCTGCACTTGCGTTGGCG  Raphanus sativus cv Early Scarlet Globe
FD559776       --> TGAATATAGCAGCGGGTGTTCCGGGTGTATTAGCTGCACTTGCGTTGGCG  Raphanus raphanistrum subsp. landra
EY937676       --> TGAATATAGCAGCGGGTGTTCCAGGGGTATTAGCTGCACTTGCGTTGGCG  Raphanus sativus cv Early Scarlet Globe

               551    -    601
UN07665        --> TATAACACCAATCTTTTTGGTGCTTTGACTCATTACAGTAGCGGTCAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530325       <-- TATAACACCAATCTTTTTGGTGCTTTGACTCATTACAGTAGCGGTCAAGC
FD555426       <-- TATAACACCAATCTTTTTGGTGCTTTGACTCATTACAGTAGCGGTCAAGC
EW730958       <-- TATAACACCAATCTTTTTGGTGCTTTGACTCATTACAGTAGCGGTCAAGC
EV525631       --> TATAACACCAATCTTTTTGGTGCTTTGACTCATTACAGTAGCGGTCAAGC
EW725794       --> TATAACACCAATCTTTTTGGTGCTTTGACTCATTACAGTAGCGGTCAAGC
FD559776       --> TATAACACCAATCTTTTTGGTGCTTTGACTCATTACAGTAGCGGTCAAGC
EY937676       --> TATAACACCAATCTTTTTGGTGCTTTGACTCATTACAGTAGCGGTCAAGC

               601    -    651
UN07665        --> CGCTGTCTACTATGGAGCTGGTTATGTTGATCTACCTGATGTATTCAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530325       <-- CGCTGTCTACTATGGAGCTGGTTATGTTGATCTACCTGATGTATTCAAGA
FD555426       <-- CGCTGTCTACTATGGAGCTGGTTATGTTGATCTACCTGATGTATTCAAGA
EW730958       <-- CGCTGTCTACTATGGAGCTGGTTATGTTGATCTACCTGATGTATTCAAGA
EV525631       --> CGCTGTCTACTATGGAGCT...............................
EW725794       --> CGCTGTCTACTATGGAGCTGGTTATGTTGATCTACCTGATGTATTCAAGA
FD559776       --> CGCTGTCTACTATGGAGCTGGTTATGTTGATCTACCTGATGTATTCAAGA
EY937676       --> CGCTGTCTACTATGGAGCTGGTTATGTTGATCTACCTGATGTATTCAAGA

               651    -    701
UN07665        --> TTGGATTTGTGATGGCAACCATTAATGCTATCATCTGGGGAGTAGTTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530325       <-- TTGGATTTGTGATGGCAACCATTAATGCTATCATCTGGGGAGTAGTTGGA
FD555426       <-- TTGGATTTGTGATGGCAACCATTAATGCTATCATCTGGGGAGTAGTTGGA
EW730958       <-- TTGGATTTGTGATGGCAACCATTAATGCTATCATCTGGGGAGTAGTTGGA
EV525631       --> ..................................................
EW725794       --> TTGGATTTGTGATGGCAACCATTAATGCTATCATCTGGGGAGTAGTTGGA
FD559776       --> TTGGATTTGTGATGGCAACCATTAATGCTATCATCTGGGGAGTAGTTGGA
EY937676       --> TTGGATTTGTGATGGCAACCATTAATGCTATCATCTGGGGAGTAGTTGGA

               701    -    751
UN07665        --> ACTTTCTGGTGGAAGTTTTTGGGTCTCTATTAAAGAGCTTTACTTAAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530325       <-- ACTTTCTGGTGGAAGTTTTTGGGTCTCTATTAAAGAGCTTTACTTAAAAT
FD555426       <-- ACTTTCTGGTGGAAGTTTTTGGGTCTCTATTAAAGAGCTTTACTTAAAAT
EW730958       <-- ACTTTCTGGTGGAAGTTTTCGGGTCTCTATTAAAGAGCTTTACTTAAAAT
EV525631       --> ..................................................
EW725794       --> ACTTTCTGGTGGAAGTTTTCGGGTCTCTATTAAAGAGCTTTACTTAAAAT
FD559776       --> ACTTTCTGGTGGAAGTTTTTGGGTCTCTATTAAAGAGCTTTACTTAAAAT
EY937676       --> ACTTTCTGGTGGAAGTTTTTGGGTCTCTATTAAAGAGCTTTACTTAAAAT

               751    -    801
UN07665        --> CATCACAAGTTGTTCTTCAAAGCTTGCAACGACGTTTAATCTCGTTGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530325       <-- CATCACAAGTTGTTCTTCAAAGCTTGCAACGACGTTTAATCTCGTTGATC
FD555426       <-- CATCACAAGTTGTTCTTCAGAGCTTGCAACGACGTTTAATCTCGTTGATC
EW730958       <-- CATCACAAGTTGTTCTTCAAAGCTTGCAACGACGTTTAATCTCGTTGATC
EV525631       --> ..................................................
EW725794       --> CATCACAAGTTGTTCTTCAAAGCTTGCAACGACGTTTAATCTCGTTGATC
FD559776       --> CATCACAAGTTGTTCTTCAGAGCTTGCAACGACGTTTAATCTCGTTGATC
EY937676       --> CATCACAAGTTGTTCTTCAAAGCTTGCAACGACGTTTAATCTCGTTGATC

               801    -    851
UN07665        --> ATTTGGTTACTTTTAGAGGGTTTTGTTTCCTCTTCTTTTAAGAAAAAATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530325       <-- ATTTGGTTACTTTTAGAGGGTTTTGTTTCCTCTTCTTTTAAGAAAAAATT  Raphanus raphanistrum subsp. maritimus
FD555426       <-- ATTTGGTTACTTTTAGAGGGTTTTGTTTCCTCTTCTTTTAAGAAAAAATT  Raphanus raphanistrum subsp. landra
EW730958       <-- ATTTG----GTTTTAGAGGGTTTTGTTTCCTCTTCTTTTAAGAAAAAATT  Raphanus sativus cv Early Scarlet Globe
EV525631       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EW725794       --> ATTTGGTT----TTAGAGGGTTTTGTTTCCTCTTCTTTTAAGAAAAA-TT  Raphanus sativus cv Early Scarlet Globe
FD559776       --> ATTTGGTTACTTTTAGAGGGTTTTGTTTCCTCTTCTTTTAAGAAAAA-TT  Raphanus raphanistrum subsp. landra
EY937676       --> ATTTGGTT----TTAGAGGGTTTTGTTTCCTCTTCTTTTAAGAAAAAATT  Raphanus sativus cv Early Scarlet Globe

               851    -    901
UN07665        --> TACATTCAGAGACTTTACAATGGATCTGCATTTACTTCATTTTCAGATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530325       <-- TACATTCAGAGACTTTACAATGGATCTGCATTTACTTCATTTTCAGATCT
FD555426       <-- TACATTCAGAGACTTTACAATGGATCTGCATTTACTTCATTTTCAGATCT
EW730958       <-- TACATTCAGAGACTTTACAATGGATCTGCATTTACTcc............
EV525631       --> ..................................................
EW725794       --> TACATTCAGAGACTTTACAATGGATCTGCATTTACTcc............
FD559776       --> TACATTCAGAGACTTTACAATGGATCTGCATTTACTTCATTTTCAGATCT
EY937676       --> TACATTCAGAGACTTTACAATGGATCTGCATTTACTTCATTTTCAGATCT

               901    -    951
UN07665        --> GTTTATGGATGTTATGACTTTTTTCTTATTACTTACCTGCATATTCTTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530325       <-- GTTTATGGATGTTATGACT...............................
FD555426       <-- GTTTATGGATGTTATGACTTTTTTCTTATTACTTACCTGCATATTCTTAA
EW730958       <-- ..................................................
EV525631       --> ..................................................
EW725794       --> ..................................................
FD559776       --> GTTTATGGA.........................................
EY937676       --> CTTTATGGATGTTATGACTTTTTTCTTATTACTTACCTGCATATTCTTAA

               951    -   1001
UN07665        --> TTTATGTCTAGAAAAGTGAACTTTCTCCTAACTCAAGTTTATTACAATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV530325       <-- ..................................................
FD555426       <-- TTTATGTC..........................................
EW730958       <-- ..................................................
EV525631       --> ..................................................
EW725794       --> ..................................................
FD559776       --> ..................................................
EY937676       --> TTTATGTCTAGAAAAGTGAACTTTCTCCTAACTCAAGTTTATTACAATCT

               1001   -   1051
UN07665        --> CTAGTGGTTTTAAATT
                   ~~~~~~~~~~~~~~~~
EV530325       <-- ................
FD555426       <-- ................
EW730958       <-- ................
EV525631       --> ................
EW725794       --> ................
FD559776       --> ................
EY937676       --> CTAGTGGTTTTAAATT