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Alignment for radish unigene UN07944

               1      -     51
UN07944        --> CATCTCCGCGTAGCATGTGGAAAGGTGCTTACCATTGTAACACAACCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570554       <-- ..................................................
FD975476       <-- ..................................................
FD528675       <-- ..................................................
FD546372       <-- ..................................................
FD937198       <-- ..................................................
FD936936       <-- ..................................................
FD979442       --> CATCTCCGCGTAGCATGTGGAAAGGTGCTTACCATTGTAACACAACCCAA
FD941253       --> ..................................................
FD550408       --> ..................................................
FD532118       --> ..................................................

               51     -    101
UN07944        --> CTATCTGGCTGTACATACAACAGAGAGGCTGAAGGTTACTGCCCAATTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570554       <-- ..................................................
FD975476       <-- ..................................................
FD528675       <-- ..................................................
FD546372       <-- ..................................................
FD937198       <-- ..................................................
FD936936       <-- ..................................................
FD979442       --> CTATCTGGCTGTACATACAACAGAGAGGCTGAAGGTTACTGCCCAATTCT
FD941253       --> ..................................................
FD550408       --> ..................................................
FD532118       --> ..................................................

               101    -    151
UN07944        --> AAGCTATAACGGAGACTTGTCTCAGTGGGCTCGTTACTTTCCACAGGCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570554       <-- ..................................................
FD975476       <-- ..................................................
FD528675       <-- ..................................................
FD546372       <-- ..................................................
FD937198       <-- ..................................................
FD936936       <-- ..................................................
FD979442       --> AAGCTATAACGGAGACTTGTCTCAGTGGGCTCGTTACTTTCCACAGGCTA
FD941253       --> .............................................GGCTA
FD550408       --> ..................................................
FD532118       --> ..................................................

               151    -    201
UN07944        --> ACAAAGGCGGTCAGTCCTCCTTAGCAGATTATTGTACATATTTCGTAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570554       <-- ..................................................
FD975476       <-- ..................................................
FD528675       <-- ..................................................
FD546372       <-- ..................................................
FD937198       <-- ..................................................
FD936936       <-- ..................................................
FD979442       --> ACAAAGGCGGTCAGTCCTCCTTAGCAGATTATTGTACATATTTCGTAGCC
FD941253       --> ACAAAGGCGGTCAGTCCTCCTTAGCAGATTATTGTACATATTTCGTAGCC
FD550408       --> ..................................................
FD532118       --> ..................................................

               201    -    251
UN07944        --> TATTCAGATGGGTCTTGTACGGACATCAATAGTGCACGTGCGCCTGACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570554       <-- ..................................................
FD975476       <-- ..................................................
FD528675       <-- ..................................................
FD546372       <-- ..................................................
FD937198       <-- ..................................................
FD936936       <-- ..................................................
FD979442       --> TATTCAGATGGGTCTTGTACGGACATCAATAGTGCACGTGCGCCTGACAG
FD941253       --> TATTCAGATGGGTCTTGTACGGACATCAATAGTGCACGTGCGCCTGACAG
FD550408       --> ..................................................
FD532118       --> ..................................................

               251    -    301
UN07944        --> GATGTTGGGTGAAGTGAGTGGGAGTGAGTCCAGGTGTATGGCGTCGTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570554       <-- ..................................................
FD975476       <-- ..................................................
FD528675       <-- ..................................................
FD546372       <-- ..................................................
FD937198       <-- ..................................................
FD936936       <-- ..................................................
FD979442       --> GATGTTGGGTGAAGTGAGTGGGAGTGACTCCAGGTGTATGGCGTCGTCTT
FD941253       --> GATGTTGGGTGAAGTGAGAGGGAGTGAGTCCAGGTGTATGGCGTCGTCTT
FD550408       --> ..................................................
FD532118       --> ..................................................

               301    -    351
UN07944        --> TAGTGCGTACTGGGTTTGTCCGTGGTTCCATGCCACAGGGGAATGGCTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570554       <-- ..................................................
FD975476       <-- ..................................................
FD528675       <-- ..................................................
FD546372       <-- ..................................................
FD937198       <-- ..................................................
FD936936       <-- ..................................................
FD979442       --> TAGTGCGTACTGGGTTTGTCCGGGATTCCATGCCACAGGGGAATGGCTGT
FD941253       --> TAGTGCGTACCGGGTTTGTCCGTGGTTCCATGCCACAGGGGAATGGCTGT
FD550408       --> ..................................................
FD532118       --> ..................................................

               351    -    401
UN07944        --> TATCAGCACAGATGTAAAAATAATTTGTTGGAGGTTGCTGTGGAGGGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570554       <-- ..................................................
FD975476       <-- ..................................................
FD528675       <-- ..................................................
FD546372       <-- ..................................................
FD937198       <-- ..................................................
FD936936       <-- ..................................................
FD979442       --> TATCAGCACAGATGTAAAAATAATTTGTTGGAGGTTGCTGTGGAGGGAGA
FD941253       --> TATCAGCACAGATGCAAAAATAATTTGTTGGAGGTTGCTGTGGAGGGAGA
FD550408       --> ........ggGATGTAAAAATAATTTGTTGGAGGTTGCTGTGGAGGGAGA
FD532118       --> ..................................................

               401    -    451
UN07944        --> ATGGAAATTATGCCCTCAAGCTGGTGGACCGATTCAATTTCCCGGTTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570554       <-- ..................................................
FD975476       <-- ..................................................
FD528675       <-- ..................................................
FD546372       <-- ..................................................
FD937198       <-- ..................................................
FD936936       <-- ..................................................
FD979442       --> ATGGAAATTATGCCCTCAAGCTGGTGGACCGATTCAATTTCCCGGTTTCA
FD941253       --> ATGGAAATTATGCCCTCAAGCTGGTGGACCGATTCAATTTCCCGGTTTCA
FD550408       --> ATGGAAATTATGCCCTCAAGCTGGTGGACCGATTCAATTTCCCGGTTTCA
FD532118       --> ..................................................

               451    -    501
UN07944        --> ATGGTGAATTAATTTGTCCGGCTTACCATGAACTCTGCGGTACACCCGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570554       <-- ..................................................
FD975476       <-- ..................................................
FD528675       <-- ..................................................
FD546372       <-- ..................................................
FD937198       <-- ..................................................
FD936936       <-- ..................................................
FD979442       --> ATGGTGAATTAATTTGTCCGGCTTACCATGAACTCTGCGGTACACCCGTA
FD941253       --> ATGGTGAATTAATTTGTCCGGCTTACCATGAACTCTGCGGTACACCCGTA
FD550408       --> ATGGTGAATTAATTTGTCCGGCTTACCATGAACTCTGCGGCACGCCCGTA
FD532118       --> ..................................................

               501    -    551
UN07944        --> GTTTCTGTGCTTGGTCAGTGTCCTAATTCTTGTAACTTCAATGGAGATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570554       <-- ..................................................
FD975476       <-- ..................................................
FD528675       <-- ..................................................
FD546372       <-- ..................................................
FD937198       <-- ..................................................
FD936936       <-- ..................................................
FD979442       --> GTTTCTGTACTTGGTCAGTGTCCTAATTCTTGTAACTTCAATGGAGATTG
FD941253       --> GTTTCTGTGCTTGGTCAGTGTCCTAATTCTTGTAACTTCAATGGAGATTG
FD550408       --> GTTTCTGTGCTTGGTCAGTGTCCTAATTCTTGTAACTTCAATGGAGATTG
FD532118       --> ..................................................

               551    -    601
UN07944        --> TGTTGATGGGAAGTGTCGTTGTCTCCTTGGTTATCACGGTCATGACTGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570554       <-- ..................................................
FD975476       <-- ..................................................
FD528675       <-- ..................................................
FD546372       <-- ..................................................
FD937198       <-- ..................................................
FD936936       <-- ..................................................
FD979442       --> TGTTGATGGGAAGTGTTGTTGTCTCCTTGGTTATCACGGTCATGACTGTA
FD941253       --> TGTTGATGGGAAGTGTCGTTGTCTCCTTGGTTATCACGGTCATGACTGTA
FD550408       --> TGTTGATGGGAAGTGTCGTTGTCTCCTTGGTTATCACGGTCATGACTGTA
FD532118       --> ..................................................

               601    -    651
UN07944        --> AAATCCGTTCTTGCCCTAACAATTGCAGTGGACATGGAAAATGCACAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570554       <-- ..................................................
FD975476       <-- ..................................................
FD528675       <-- ..................................................
FD546372       <-- ..................................................
FD937198       <-- ..................................................
FD936936       <-- ..................................................
FD979442       --> AAATCCGTTCTTGCCCTAACAATTGCAGTGGACATGGAAAATGCACAACT
FD941253       --> AAATCCGTTCTTGCCCTAACAATTGCAGTGGACATGGAAAATGCACAACT
FD550408       --> AAATCCGTTCTTGCCCTAATAATTGCAGTGGACATGGAAAATGCACAACT
FD532118       --> ...................gAATTGCAGTGGGCATGGAAAATGCACAACT

               651    -    701
UN07944        --> CAAGGTGTATGCATATGCGAAAATGGATTTACTGGAATTGATTGTTCCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570554       <-- .................................GGAATTGATTGTTCCAC
FD975476       <-- ..................................................
FD528675       <-- ..................................................
FD546372       <-- ..................................................
FD937198       <-- ..................................................
FD936936       <-- ..................................................
FD979442       --> CAAGGAGTATGCATATGCGAAAAT..........................
FD941253       --> CAAGGTGTATGCATATGCGAAAATGGATTTACTGGAATTGATTGTTCCAC
FD550408       --> CAAGGAGTATGCATATGCGAAAATGGATTTACCGGAATTGATTGTTCCAC
FD532118       --> CAAGGTGTATGCATATGCGAAAATGGATTTACTGGAATTGATTGTTCCAC

               701    -    751
UN07944        --> TGCTGTGTGCGACGAACAATGCAGCCTACATGGAGGAGTGTGTGACAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570554       <-- TGCTGTGTGCGACGAACAATGCATCCTACATGGAGGAGTGTGTGACAATG
FD975476       <-- ...........................ACATGGAGGAGTGTGTGACAACG
FD528675       <-- .................................AGGAGTGTGTGACAATG
FD546372       <-- ..................................................
FD937198       <-- ..................................................
FD936936       <-- ..................................................
FD979442       --> ..................................................
FD941253       --> TGCTGTGTGCGACGAACAATGCAGCCTACATGGAGGAGTGTGTGACAATG
FD550408       --> TGCTGTGTGCGACGAACAATGCAGCCTACATGGAGGGGTGTGTGACAATG
FD532118       --> TGCTGTGTGCGACGAACAATGCAGCCTACATGGAGGAGTGTGTGACAATG

               751    -    801
UN07944        --> GTGTTTGCGAGTTCCGTTGCTCTGATTATGCTGGCTACACATGTCAGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570554       <-- GTGTTTGCGAGTTCCGTTGCTCTGATTATGCTGGCTACACATGTCAGAAC
FD975476       <-- GTGTTTGCGAGTTCCGTTGCTCTGATTATGCTGGCTACACATGTCAGAAC
FD528675       <-- GTGTTTGCGAGTTCCGTTGCTCTGATTATGCTGGCTACACATGTCAGAAC
FD546372       <-- .gGTTTGCGAGTTCCGTTGCTCTGACTATGCTGGCTACACATGTCAGAAC
FD937198       <-- .....................CTGATTATGCTGGCTACACATGTCAGAAC
FD936936       <-- ..................................................
FD979442       --> ..................................................
FD941253       --> GTGTTTGCGAGTTCCGTTGCTCTGATTATGCTGGCTACACATGTCAGA-C
FD550408       --> GGGTTTGCGAGTTCCGTTGCTCTGACTATGCTGGCTACACATGTCAGAAC
FD532118       --> GTGTTTGCGAGTTCCGTTGCTCTGATTATGCTGGCTACACATGTCAGAAC

               801    -    851
UN07944        --> AGCTCTAAACTAGTAACAAGTTTACTGGTATGCAAAAATGTGTTGGAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570554       <-- AGCTCTAAACTAGTAACAGGTTTACTGGTATGCAAAAATGTGTTGGAGAG
FD975476       <-- AGCTCTAAACTAGTAACAAGTTTACTGGTATGCAAAAATGTGTTGGAGAG
FD528675       <-- AGCTCTAAACTAGTAACAAGTTTACTGGTATGCAAAAATGTGTTGGAGAG
FD546372       <-- AGCTCTAAACTAGTAACAAGTTTACTGGTATGCAAAAATGTGTTGGAGAG
FD937198       <-- AGCTCTAAACTAGTAACAAGTTTACTGGTATGCAAAAATGTGTTGGAGAG
FD936936       <-- ..............AACAAGTTTACTGGTATGCAAAAATGTGTTGGAGAG
FD979442       --> ..................................................
FD941253       --> AGCTCTAAACTAGTAACAAGTTTACTGGTATGCAAAA-TGTGTTGGAGAG
FD550408       --> AGCTCTAAACTAGTAACAAGTTTACTGGTATGCAAAAATGTGTTGGAGAG
FD532118       --> AGCTCTAAACTAGTAACAAGTTTACTGGTATGCAAAAATGTGTTGGAGAG

               851    -    901
UN07944        --> AGACATGTTGGGGCAACATTGTGCTCCACGAGAACCTAGCATACTTCAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570554       <-- AGACATGTTGGGGCAACATTGTGCTCCACGAGAACCTAGCATACTTCAGC
FD975476       <-- AGACATGTTGGGGCAACATTGTGCTCCACGAGAACCTAGCATACTTCAGC
FD528675       <-- AGACATGTTGGGGCAACATTGTGCTCCACGAGAACCTAGCATACTTCAGC
FD546372       <-- AGACATGTTGGGGCAACATTGTGCTCCACGAGAACCTAGCATACTTCAGC
FD937198       <-- AGACATGTTGGGGCAACATTGTGCTCCACGAGAACCTAGCATACTTCAGC
FD936936       <-- AGACATGTTGGGGCAACATTGTGCTCCACGAGAACCTAGCATACTTCAGC
FD979442       --> ..................................................
FD941253       --> AGACATGTTGGGGCA-CATTGTGCTCCACGAGAACCTAGCATACTTCAGC
FD550408       --> AGACATGTTGGGGCAACATTGTGCTCCACGAGAACCTAGCATACTTCAGC
FD532118       --> AGACATGTTGGGGCAACATTGTGCTCCACGAGAACCTAGCATACTTCAGC

               901    -    951
UN07944        --> AGCTTGAGGAAGTTGTGGTCATGCCCAACTACAATAGGCTTTTTCCAGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570554       <-- AGCTTGAGGAAGTTGTGGTCATGCCCAACTACAATAGGCTTTTTCCAGGC
FD975476       <-- AGCTTGAGGAAGTTGTGGTCATGCCCAACTACAATAGGCTTTTTCCAGGC
FD528675       <-- AGCTTGAGGAAGTTGTGGTCATGCCCAACTACAATAGGCTTTTTCCAGGC
FD546372       <-- AGCTTGAGGAAGTTGTGGTCATGCCCAACTACAATAGGCTTTTTCCAGGC
FD937198       <-- AGCTTGAGGAAGTTGTGGTCATGCCCAACTACAATAGGCTTTTTCCAGGC
FD936936       <-- AGCTTGAGGAAGTTGTGGTCATGCCCAACTACAATAGGCTTTTTCCAGGC
FD979442       --> ..................................................
FD941253       --> AGCTTGA...........................................
FD550408       --> AGCTTGAGGAAGTTGTGGTCATGCCCAACTACAATAGGCTTTTTCCAGGC
FD532118       --> AGCTTGAGGAAGTTGTGGTCATGCCCAACTACAATAGGCTTTTTCCAGGC

               951    -   1001
UN07944        --> GGGGCTCGGAAATTGTTTAACATTTTTGGTAACAGCTATTGTGATGAGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570554       <-- GGGGCTCGGAAATTATTTAGCATTTTTGGTAACAGCTATTGTGATGAGGC  Raphanus raphanistrum subsp. landra
FD975476       <-- GGGGCTAGGAAATTATTTAACATTTTTGGTAACAGCTATTGTGATGAGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD528675       <-- GGGGCTCGGAAATTATTTAGCATTTTTGGTAACAGCTATTGTGATGAGGC  Raphanus raphanistrum subsp. maritimus
FD546372       <-- GGGGCTCGGAAATTGTTTAACATTTTTGGTAACAGCTATTGTGATGAGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD937198       <-- GGGGCTCGGAAATTGTTTAACATTTTTGGTAACAGCTATTGTGATGAGGC  Raphanus sativus var. oleiformis
FD936936       <-- GGGGCTCGGAAATTGTTTAACATTTTTGGTAACAGCTATTGTGATGAGGC  Raphanus sativus var. oleiformis
FD979442       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD941253       --> ..................................................  Raphanus sativus var. oleiformis
FD550408       --> GGGGCTCGGAAATTGTTTAACATTTTTGGTAACAGCTA............  Raphanus raphanistrum subsp. raphanistrum (NY)
FD532118       --> GGGGCTCGGAAATTATTTAGCATTTTTGGTAACAGCTATTGTGATGAGGC  Raphanus raphanistrum subsp. maritimus

               1001   -   1051
UN07944        --> AGCGAAAAGACTAGCATGTTGGATATCGATCCAGAAGTGTGATATTGATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570554       <-- AGCGAAAAGACTAGCATGTTGGATATCGATCCAGAAGTGTGATATTGATG
FD975476       <-- AGCGAAAAGACTAGCATGTTGGATATCGATCCAGAAGTGTGATATTGATG
FD528675       <-- AGCGAAAAGACTAGCATGTTGGATATCGATCCAGAGGTGTGATATTGATG
FD546372       <-- AGCGAAAAGACTAGCATGTTGGATATCGATCCAGAAGTGTGATATTGATG
FD937198       <-- AGCGAAAAGACTAGCATGTTGGATATCGATCCAGAAGTGTGATATTGATG
FD936936       <-- AGCGAAAAGACTAGCATGTTGGATATCGATCCAGAAGTGTGATATTGATG
FD979442       --> ..................................................
FD941253       --> ..................................................
FD550408       --> ..................................................
FD532118       --> AGCGAAAAGACTAGCATGTTGGATATCGATCCAGAGGTGTGATATTGATG

               1051   -   1101
UN07944        --> GAGACGATAGATTACGGGTATGCCATTCAGCATGTCAGTCCTATAATGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570554       <-- GAGACGATAGATTACGGGTATGCCATTCAGCATGTCAGTCCTATAATGTG
FD975476       <-- GAGACGATAGATTACGGGTATGCCATTCAGCATGTCAGTCCTATAATGTG
FD528675       <-- GAGACGATAGATTACGGGTATGCCATTCAGCATGTCAGTCCTATAATGTG
FD546372       <-- GAGACGATAGATTACGGGTATGCCATTCAGCATGTCAGTCCTATAATGTG
FD937198       <-- GAGACGATAGATTACGGGTATGCCATTCAGCATGTCAGTCCTATAATGTG
FD936936       <-- GAGACGATAGATTACGGGTATGCCATTCAGCATGTCAGTCCTATAATGTG
FD979442       --> ..................................................
FD941253       --> ..................................................
FD550408       --> ..................................................
FD532118       --> GAGACGATAGATTACGGGTATGCCATTCAGCATGTCAGTCCTATAATGTG

               1101   -   1151
UN07944        --> GCGTGTGGGGCTTCCTTAGACTGCTCGGATCAAACACTTTTCAGCACAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570554       <-- GCGTGTGGGGCTTCCTTAGACTGCTCGGATCAAACACTTTTCAGCACATC
FD975476       <-- GCGTGTGGCGCTTCCTTAGACTGCTCGGATCAAACACTTTTCAGCACAGC
FD528675       <-- GCGTGTGGGGCTTCCTTAGACTGCTCGGATCAAACACTTTTCAGCACAGC
FD546372       <-- GCATGTGGGGCTTCCTTAGACTGCTCGGATCAAACACTTTTCAACACAGC
FD937198       <-- GCGTGTGGGGCTTCCTTAGACTGCTCGGATCAAACACTTTTCAGCACAGC
FD936936       <-- GCGTGTGGGGCTTCCTTAGACTGCTCGGATCAAACACTTTTCAGCACAGC
FD979442       --> ..................................................
FD941253       --> ..................................................
FD550408       --> ..................................................
FD532118       --> GCGTGTGGGGCTTCCTTAGACTGCTCGGATCAAACACTTTTCAGCACAGC

               1151   -   1201
UN07944        --> GGAAGAAGGCGATGCTGAATGTACGGGATCTGCCGAGATCAGATCGCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570554       <-- GGAAGAAGGCGATGCTGAATGTACGGGTTCTGCCGAGATC..........
FD975476       <-- GGAAGAAGGCGATGCTGAATGTACGGGATCTGCCGAGATCAGATCGCCAT
FD528675       <-- GGAAGAAGGCGATGCTGAATGTACGGGATCTGCCGAGATCAGATCGCCAT
FD546372       <-- GGAAGAAGGCGATGCTGAATGTACGGGATCTGCCGAGATCAGATCGCCAT
FD937198       <-- GGAAGAAGGCGATGCTGAATGTACGGGATCTGCCGAGATCAGATCGCCAT
FD936936       <-- GGAAGAAGGCGATGCTGAATGTACGGGATCTGCCGAGATCAGATCGCCAT
FD979442       --> ..................................................
FD941253       --> ..................................................
FD550408       --> ..................................................
FD532118       --> GGAAGAAGGCGATGCTGAATGTACGGGATCTGCCGAGATCAGATCGCCAT

               1201   -   1251
UN07944        --> GGTTTACCCGTTTGTGGAGTAAACTGTTAGCAAGTAACTAGGAACAATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570554       <-- ..................................................
FD975476       <-- GGTTTACCCGTTTGTGGAGTAAACTGTTAGGAAGTAACTAGGAACAATTC
FD528675       <-- GGTTTACCCGTTTGTGGAGTAAACTGTTAGCAAGTAACTAGGAACAATTC
FD546372       <-- GGTTTACCCGTTTGTGGAGTAAACTGTTAGCAAGTAACTAGGAACAATTC
FD937198       <-- GGTTTACCCGTTTGTGGAGTAAACTGTTAGCAAGTAACTAGGAACAATTC
FD936936       <-- GGTTTACCCGTTTGTGGAGTAAACTGTTAGCAAGTAACTAGGAACAATTC
FD979442       --> ..................................................
FD941253       --> ..................................................
FD550408       --> ..................................................
FD532118       --> GGTTTACCCGTTTGTGGAGTAAACTGTTAGCAAGTAACTAGGAACAATTC

               1251   -   1301
UN07944        --> GTGTGTAGAACGCAAAATTTGTGTGTTCAAGGTAGATAGTGAGGCAGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570554       <-- ..................................................
FD975476       <-- GTGTGTAGAACGCAAAATTTGTGTGTTCAAGGTAGATAGTGAGGCAGAGT
FD528675       <-- GTGTGTAGAACGCAAAATTTGTGTGTTCAAGGTAGATAGTGAGGCAGAGT
FD546372       <-- GTGTGTAGAACGCAAAATTTGTGTGTTCAAGGTAGATAGTGAGGCAGTGT
FD937198       <-- GTGTGTAGAACGCAAAATTTGTGTGTTCAAGGTAGATAGTGAGGCAGAGT
FD936936       <-- GTGTGTAGAACGCAAAATTTGTGTGTTCAAGGTAGATAGTGAGGCAGAGT
FD979442       --> ..................................................
FD941253       --> ..................................................
FD550408       --> ..................................................
FD532118       --> GTGTGTAGAACGCAAAATTTGTGTGTTCAAG-TAGATAGTGAGGCAGAGT

               1301   -   1351
UN07944        --> TATTATTCCAAGCTGTAATTTTT-CTAGGGTTTATGAAGGTAAGGAGCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570554       <-- ..................................................
FD975476       <-- TATTATTCCAAGCTGTAATTTTT-CTAGGGTTTATGAAGGTAAGGAGCGG
FD528675       <-- TATTATTCCAAGCTGTAATTTTT-CTAGGGTTTGTGAAGGTAAGGAGCGG
FD546372       <-- TATTATTCCAAGCTGTAATTTTTTCTAGGGTTTATGAAGGTAAGGAGCGG
FD937198       <-- TATTATTCCAAGCTGTAATTTTT-TTAGGGTTTATGAAGGTAAGGAGCGG
FD936936       <-- TATTATTCCAAGCTGTAATTTTT-CTAGGGTTTATGAAGGTAAGGAGCGG
FD979442       --> ..................................................
FD941253       --> ..................................................
FD550408       --> ..................................................
FD532118       --> TATTATTCCAAGCTGTAATTTTT-CTAGGGTTTGTGAAGGTAAG-AGCGG

               1351   -   1401
UN07944        --> GCAAAATGACACCACCGTGTTACACACGTAAGTTAGGGGTCTTTTGCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570554       <-- ..................................................
FD975476       <-- GCAAAATGACACCACCGTGTTACACACGTAAGTTAGGGGTCTTTTGCCTT
FD528675       <-- GCAAAATGACACCACCGTGTTACACACGTAAGTTAGGGGTCTTTTGCCTT
FD546372       <-- GCAAAATGACACCACCGTGTTACACACGTAAGTTAGGGGTCTTTTGCCTT
FD937198       <-- GCAAAATGACACCACCGTGTTACACACGTAAGTTAGGGGTCTTTTGCCTT
FD936936       <-- GCAAAATGACACCACCGTGTTACACACGTAAGTTAGGGGTCTTTTGCCTT
FD979442       --> ..................................................
FD941253       --> ..................................................
FD550408       --> ..................................................
FD532118       --> GCAAA-TGACACCACCGTGTTACACACGTAAGTTAGGG-TCTTTTGCCTT

               1401   -   1451
UN07944        --> AGCCCACCTAATAGATTAATTAGAGTCTTTTGTCTGTCTTTCGAGTATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570554       <-- ..................................................
FD975476       <-- AGCCCACCTAATAGATTAATTAGAGTCTTTTGTCTGTCTTTCGAGTAATA
FD528675       <-- AGCCCACCTAATAGATTAATTAGAGTCTTTTGTCTGTCTTTCGAGTAATA
FD546372       <-- AGCCCACCTAATAGATTAATTAGAGTCTTTTGTCTGTCTTTCGAGTATTA
FD937198       <-- AGCCCACCTAATAGATTAATTAGAGTCTTTTGTCCGTCTTTCGAGTATTA
FD936936       <-- AGCCCACCTAATAGATTAATTAGAGTCTTTTGTCCGTCTTTCGAGTATTA
FD979442       --> ..................................................
FD941253       --> ..................................................
FD550408       --> ..................................................
FD532118       --> AGCCCcc...........................................

               1451   -   1501
UN07944        --> TGTATCGAATATATATATTATAGAACAAATGAATTTATAGGCCGAAGGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570554       <-- ..................................................
FD975476       <-- TGTATCGAATATATATATTATAGAACAAGTGAATTTATAGGCCGAAGGCC
FD528675       <-- TGTATCGAATATATATATTATAGAACAAATGAATTTATAGGCCGAAGGCC
FD546372       <-- TGTATCGAATATATATATTATAGAACAAATGAATTTATAGGCCGAAGGCC
FD937198       <-- TGTATCGAATATATATGTTATAGAACAAATGAATTTATAGGCCGAAGGCC
FD936936       <-- TGTATCGAATATATATGTTATAGAACAAATGAATTTATAGGCCGAAGGCC
FD979442       --> ..................................................
FD941253       --> ..................................................
FD550408       --> ..................................................
FD532118       --> ..................................................

               1501   -   1551
UN07944        --> TATCAAATGAAAAGAAAAGTGAAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570554       <-- ..........................
FD975476       <-- TATCAAgtg.................
FD528675       <-- TATCAAgc..................
FD546372       <-- TATCAAgt..................
FD937198       <-- TATCAAATGAAAAGAAAAGTGAAATC
FD936936       <-- TATCAAATGAAAAGAAAAGTGAAATC
FD979442       --> ..........................
FD941253       --> ..........................
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