Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN08224

               1      -     51
UN08224        --> TTTTTTTAGTATCACAACCATATGTATTACATTACACGAGATTAAACGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971737       <-- TTTTTTTAGTATCACAACCATATGTATTACATTACACGAGATTAAACGTT
FD971062       <-- ..................................................
FD562379       <-- ..................................................
FD532112       <-- ..................................................
FD540654       <-- ..................................................
FD537108       --> .....gTAGTATCACAACCATATGTATTACATTACACGAGATTAAACGTT
FD967289       --> cgtatgTAGTATCACAACCATATGTATTACATTACACGAGATTAAACGTT
FD566304       --> .......AGTATCACAACCATATGTATTACATTACACGAGATTAAACGTT
FD967781       --> .......AGTATCACAACCATATGTATTACATTACACGAGATTAAACGTT

               51     -    101
UN08224        --> ACAAGTTGTAACTTACAACCCAACCATTGTAAAAAAAAAA-CACAACCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971737       <-- ACAAGTTGTAACTTACAACCCAACCATTGTAAAAAAAAAAACACAACCAT
FD971062       <-- ..................................................
FD562379       <-- ..................................................
FD532112       <-- ..................................................
FD540654       <-- ..................................................
FD537108       --> ACAAGTTGTAACTTACAACCCAACCATTGTAAAAAAAAA--CACAACCAT
FD967289       --> ACAAGTTGTAACTTACAACCCAACCATTGTAAAAAAAAA--CACAACCAT
FD566304       --> ACAAGTTGTAACTTACAACCCAACCATTGTAAAAAAAAAA-CACAACCAT
FD967781       --> ACAAGTTGTAACTTACAACCCAACCATTGTAAAAAAAAAAACACAACCAT

               101    -    151
UN08224        --> TGTAAATACTTTAGTAGCTGCGGGCTGTTACGACTTTTTCTCACAGCCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971737       <-- TGTAAATACTTTAGTAGCTGCGGGCTGTTACGACTTTTTCTCACAGCCAC
FD971062       <-- ..................................................
FD562379       <-- ..................................................
FD532112       <-- ..................................................
FD540654       <-- ..................................................
FD537108       --> TGTAAATACTTTAGTAGCTGCGGGCTGTTACGACTTTTTCTCACAGCCAC
FD967289       --> TGTAAATACTTTAGTAGCTGCGGGCTGTTACGACTTTTTCTCACAGCCAC
FD566304       --> TGTAAATACTTTAGTAGCTGCGGGCTGTTACGACTTTTTCTCACAGCCAC
FD967781       --> TGTAAATACTTTAGTAGCTGCGGGCTGTTACGACTTTTTCTCACAGCCAC

               151    -    201
UN08224        --> TTCAACTGCACTCATTCACTTTCCCTCACAATTAAAACACCAACCCCCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971737       <-- TTCAACTGCACTCATTCACTTTCCCTCACAATTAAAACACCAACCCCCCA
FD971062       <-- ...............................................ccc
FD562379       <-- ..................................................
FD532112       <-- ..................................................
FD540654       <-- ..................................................
FD537108       --> TTCAACTGCACTCATTCACTTTCCCTCACAATTAAAACACCAACCCCCCA
FD967289       --> TTCAACTGCACTCATTCACTTTCCCTCACAATTAAAACACCAACCCCCCA
FD566304       --> TTCAACTACACTCATTCACTTTCCCCCACAATTAAAACACCAACCCCCAA
FD967781       --> TTCAACTGCACTCATTCACTTTCCCTCACAATTAAAACACCAACCCCCCA

               201    -    251
UN08224        --> AAAAAACTAATTAAAAACACACACAAAAACAAAAGTCATAGATACCAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971737       <-- AAAAAACTAATTAAAAACACACACAAAAACAAAAGTCATAGATACCAATC
FD971062       <-- AAAAAACTAATTAAAAGCACACACAAAAACAAAAGTCATAGATACCAATC
FD562379       <-- ..................................................
FD532112       <-- ..................................................
FD540654       <-- ..................................................
FD537108       --> AAAAAACTAATTAAAAACACACACAAAAACAAAAGTCATAGATACCAATC
FD967289       --> AAAAAACTAATTAAAAGCACACACAAAAACAAAAGTCATAGATACCAATC
FD566304       --> AAAAAACTAATTAAAAACACACACAAAAACAAAAGTCATAGATACCAATC
FD967781       --> AAAAAACTAATTAAAAACACACACAAAAACAAAAGTCATAAATACCAATC

               251    -    301
UN08224        --> CCCCCTTGATTTTCTCTCCTTAGTATAGAATTTTGCAAAAAAGAAGCGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971737       <-- CCCCCTTGATTTTCTCTCCTTAGTATAGAATTTTGCAAAAAAGAAGCGAA
FD971062       <-- CCCCCTTGATTTTCTCTCCTTAGTATAGAATTTTGCAAAAAAGAAGCGAA
FD562379       <-- ..................................................
FD532112       <-- ..................................................
FD540654       <-- ..................................................
FD537108       --> CCCCCTTGATTTTCTCTCCTTAGTATAGAATTTTGCAAAAAAGAAGCGAA
FD967289       --> CCCCCTTGATTTTCTCTCCTTAGTATAGAATTTTGCAAAAAAGAAGCGAA
FD566304       --> CCCCCTTGATTTTCTCTCCTTAGTATAGAATTTTGCAAAAAAGAAGCGAA
FD967781       --> CCCCCTTGATTTTCTCTCCTTAGTATAAAATTTTGCAAAAAAAAAGCGAA

               301    -    351
UN08224        --> ATTAGCGGAGAGTTTTCTTTTGTCTCGACCACTTAAAGATAGAGTTTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971737       <-- ATTAGCGGAGAGTTTTCTTTTGTCTCGACCACTTAAAGATAGAGTTTCTT
FD971062       <-- ATTAGCGGAGAGTTTTCTTTTGTCTCGACCACTTAAAGATAGAGTTTCTT
FD562379       <-- ..................................................
FD532112       <-- ..................................................
FD540654       <-- ..................................................
FD537108       --> ATTAGCGGAGAGTTTTCTTTTGTCTCGACCACTTAAAGATAGAGTTTCTT
FD967289       --> ATTAGCGGAAAGTTTTCTTTTGTCTCGACCACTTAAAGATAGAGTTTCTT
FD566304       --> ATTAGCGGAGAGTTTTCTTTTGTCTCGACCACTTAAAGATAGAGTTTCTT
FD967781       --> ATTAGCGGAAAGTTTTCTTTTGTCTCGACCACTTAAAGATAGAGTTTCTT

               351    -    401
UN08224        --> GAAAATCGGTTAGACCCTGAAATTCTTGCCGACATAGGTTTGACCAAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971737       <-- GAAAATCGGTTAGACCCTGAAATTCTTGCCGACATAGGTTTGACCAAACT
FD971062       <-- GAAAATCGGTTAGACCCTGAAATTCTTGCCGACATAGGTTTGACCAAACT
FD562379       <-- ..................................................
FD532112       <-- ..................................................
FD540654       <-- ..................................................
FD537108       --> GAAAATCGGTTAGACCCTGAAATTCTTGCCGACATAGGTTTGACCAAACT
FD967289       --> GAAAATCGGTTAGACCCTGAAATTCTTGCCGACATAGGTTTGACCAAACT
FD566304       --> GAAAATCGGTTAGACCCTGAAATTCTTACCGACATAGGTTTGACCAAACT
FD967781       --> GAAAATCGGTTAAACCCTGAAATTCTTGCCGACATAGGTTTGACCAAACT

               401    -    451
UN08224        --> GCCAGTTAGAAGGAACTATGTTCCATGAAGTCGAGGTTCTACGATCACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971737       <-- GCCAGTTAGAAGGAACTATGTTCCATGAAGTCGAGGTTCTACGATCACTG
FD971062       <-- GCCAGTTAGAAGGAACTATGTTCCATGAAGTCGAGGTTCTACGATCACTG
FD562379       <-- ..................................................
FD532112       <-- ..................................................
FD540654       <-- ..................................................
FD537108       --> GCCAGTTAGAAGGAACTATGTTCCATGAAGTCGAGGTTCTACGATCACTG
FD967289       --> GCCAGTTAGAAGGAACTATGTTCCATGAAGTCGAGGTTCTACGATCACTG
FD566304       --> GCCAGTTAGAAGGAACTATGTTCCATGAAGTCGAGGTTCTACGATCACTG
FD967781       --> GCCAGTTAAAAGGAACTATGTTCCATGAAGTCGAGGTTCTACGATCACTG

               451    -    501
UN08224        --> CCTGTGACTCGGAAAGAAAGTGACTGACCAACCAAGACAGCGTTAGATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971737       <-- CCTGTGACTCGGAAAGAAAGTGACTGACCAACCAAGACAGCGTTAGATTG
FD971062       <-- CCTGTGACTCGGAAAGAAAGTGACTGACCAACCAAGACAGTGTTAGATTG
FD562379       <-- .....GACGCGGAAAGAAAGTGACTGACCAACCAAGACAGCGT-AGA-TG
FD532112       <-- ...............GAAAGTGACTGACCAACCAAGACAGCGT-AGA-TG
FD540654       <-- ..................................................
FD537108       --> CCTGTGACTCGGAAAGAAAGTGACTGACCAACCAAGACAGCGTTAGATTG
FD967289       --> CCTGTGACTCGGAAAGAAAGTGACTGACCAACCAAGACAGTGTTAGATTG
FD566304       --> CCTGTGACGCGGAAAGAAAGTGACTGACCAACCAAGACAGCGTTAGATTG
FD967781       --> CCTGTGACTCGGAAAGAAAGTGACTGACCAACCAAAACAGCGTTAAATTG

               501    -    551
UN08224        --> CCAGTTCTGACCCCAGTTTCTGCTCAAACTCATCCAACCAGTTCGCGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971737       <-- CCAGTTCTGACCCCAGTTTCTGCTCAAACTCATCCAACCAGTTCGCGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD971062       <-- CCAGTTCTGACCCCAGTTTCTGCTCAAACTCATCCAACCAGTTCGCGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD562379       <-- CCAGTTCTGACCCCAGTTTCTGCTCAAACTCATCCAACCAGTTCGTGAAC  Raphanus sativus var. oleiformis
FD532112       <-- CCAGTTCTGACCCCAGTTTCTGCTCAAACTCATCCAACCAGTTCGTGAAC  Raphanus raphanistrum subsp. maritimus
FD540654       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD537108       --> CCAGTTCTGACCCCAGTTTCTGCTCAAACTCATCCAACCAGTACGCGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD967289       --> CCAGTTCTGACCCCAGTTTCTGCTCAAACTCATCCAACCAGTTCGCGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD566304       --> CCAGTTCTGACCCCAGTTTCTGCTCAAACTCATCCAACCAGTTCGTGAAC  Raphanus sativus var. oleiformis
FD967781       --> CCAGTTCTGACCCCAGTTTCTGCTCAAACTCATCCAACCAGTTCGCGAAC  Raphanus raphanistrum subsp. raphanistrum (MS)

               551    -    601
UN08224        --> CTTTCACGCTCGTCCTCACGATGTCTCCTGCTCCCGCCACGTTAGTGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971737       <-- CTTTCACGCTCGTCCTCACGATGTCTCCTGCTCCCGCCACGTTAGTGATC
FD971062       <-- CTTTCACGCTCGTCCTCACGATGTCTCCTGCTCCCGCCACGTTAGTGATC
FD562379       <-- -TTTCACGCTCGTCCTCACGATGTCTCCTGCTCCCGCCACGTTAGTGATC
FD532112       <-- -TTTCACGCTCGTCCTCACGATGTCTC-TGCTCCCGCCACGTTAGTGATC
FD540654       <-- ....CACGCTCGTCCTCACGATGTCTC-TGCTCCCGCCACGTTAGTGATC
FD537108       --> CTTTCACGCTCGTCCTCACGATGTCTCCTGCTCCCGCCACGTTAGTGATC
FD967289       --> CTTTCACGCTCGTCCTCACGATGTCTCCTGCTCCCGCCACGTTAGTGATC
FD566304       --> CTTTCACGCTCGTCCTCACGATGTCTCCTGCTCCCGCCACGTTAGTGATC
FD967781       --> CTTTCACGCTCGTCCTCACGATGTCTCCTGCTCCCGCCACGTTAGTGA..

               601    -    651
UN08224        --> AGAACCAAGTTGAAGTAACGGTGACCGTTGATTGTGAACCTTATCCCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971737       <-- AGAACCAAGTTGAAGTAACGGTGACCGTTGATTGTGAACCTTATCCCTCC
FD971062       <-- AGAACCAAGTTGAAGTAACGGTGACCGTTGATTGTGAACCTTATCCCTCC
FD562379       <-- AGAACCAAGTTGAAGTAACGGTGACCGTTGATTGTGAACCTTATCCCTCC
FD532112       <-- AGAACCAAGTTGAAGTAACGGTGACCGTTGATTGTGAACCTTATCCCTCC
FD540654       <-- AGAACCAAGTTGAAGTAACGGTGACCGTTGATTGTGAACCTTATCCCTCC
FD537108       --> AGAACCAAGTTGAAGTAACGGTGACCGTTGATTGTGAACCTTATCCCTCC
FD967289       --> AGAACCAAGTTGAAGTAACGGTGACCGTTGATTGTGAACCTTATCCCTCC
FD566304       --> AGAACCAAGTTGAAGTAACGGTGACCGTTGATTGTGAACCTTATCCCTCC
FD967781       --> ..................................................

               651    -    701
UN08224        --> TCTCTTTCTACAAGGCACCCTGCGGTATGAAACTGGGACAATGCCGGCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971737       <-- TCTCTTTCTACAAGGCACCCTGCGGAATGAAACTGGGACAATGCCGGCAC
FD971062       <-- TCTCTTTCTACCAGGCACCCTGCGGTATGAAACTGGGACAATGCCGGCAC
FD562379       <-- TCTCTTTCTACAAGGCACC-TGCGGTATGAAACTGGGACAATGCCGGCAC
FD532112       <-- TCTCTTTCTACAAGGCACCCTGCGGTATGAAACTGGGACAATGCCGGCAC
FD540654       <-- TCTCTTTCTACAAGGCACCCTGCGGTATGAAACTGGGACAATGCCGGCAC
FD537108       --> TCTCTTTCTACAAGGCACCCTGCGGTATGAAACTGGGACAATGCCGGCAC
FD967289       --> TCTCTTTCTACCAGGCACCCTGCGGTATGAAACTGGGACAATGCCGGCAC
FD566304       --> TCTCTTTCTACAAGGCACCCTGCGGTATGAAACTGGGACAATGCCGGCAC
FD967781       --> ..................................................

               701    -    751
UN08224        --> GATATTGAGCGATCTTGAGGAAGACAGGCATGGCTAGATCAAAGTGGGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971737       <-- GATc..............................................
FD971062       <-- GATATTGAGCGATCTTGAGGAAGACAGGCATGGCTAGATCAAAGTGGGCT
FD562379       <-- GATATTGAGCGATCTTGAGGAAGACAGGCATGGCTAGATCAAAGTGGGCT
FD532112       <-- GATATTGAGCGATCTTGAGGAAGACAGGCATGGCTAGATCAAAGTGGGCT
FD540654       <-- GATATTGAGCGATCTTGAGGAAGACAGGCATGGCTAGATCAAAGTGGGCT
FD537108       --> GATATTGAGCGATCTTGAGGAAGACAGGCATGGCTAGATCAAAGTGGGCT
FD967289       --> GATATTGAGCGATCTTGAGGAAGACAGGCATGGCTAGATCAAAGTGGGCT
FD566304       --> GATATTGAGCGATCTTGAGGAAGACAGGCATGGCTAGATCAAAGTGGGCT
FD967781       --> ..................................................

               751    -    801
UN08224        --> CTTGGCGGGTTGCACCATCCTCCGTTATCACTGGCCTGAGCAAAGTTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971737       <-- ..................................................
FD971062       <-- CTTGGCGGGTTGCACCATCCTCCGTTATCACTGGCCTGAGCAAAGTTTGG
FD562379       <-- CTTGGCGGGTTGCACCATCCTCCGTTATCACTGGCCTGAGCAAAGTTTGG
FD532112       <-- CTTGGCGGGTTGCACCATCCTCCGTTATCACTGGCCTGAGCAAAGTTTGG
FD540654       <-- CTTGGCGGGTTGCACCATCCTCCGTTATCACTGGCCTGAGCAAAGTTTGG
FD537108       --> CTTGGCGGGTTGCACCATCCTCCGTTATCACTGGCCTGAGCAAAGTTTGG
FD967289       --> CTTGGCGGGTTGCACCATCCTCCGTTATCACTGGCCTGAGCAAAGTTTGG
FD566304       --> CTTGG.............................................
FD967781       --> ..................................................

               801    -    851
UN08224        --> TGGGCAGAAATTGGTTGCGGTAATGAGTATCGATGGGCTACCTGAATGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971737       <-- ..................................................
FD971062       <-- TGGGCAGAAATTGGTTGCGGTAATGAGTATCGATGGGCc...........
FD562379       <-- TGGGCAGAAATTGGTTGCGGTAATGAGTATCGATGGGCTACCTGAATGGC
FD532112       <-- TGGGCAGAAATTGGTTGCGGTAATGAGTATCGATGGGCTACCTGAATGGC
FD540654       <-- TGGGCAGAAATTGGTTGCGGTAATGAGTATCGATGGGCTACCTGAATGGC
FD537108       --> TGGGCAGAAATTGGTT..................................
FD967289       --> TGGGCAGA..........................................
FD566304       --> ..................................................
FD967781       --> ..................................................

               851    -    901
UN08224        --> ACCATTGTGGGTCGTTGGCACATTTTAGCTCAAAGCAGGCTCCACAACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971737       <-- ..................................................
FD971062       <-- ..................................................
FD562379       <-- ACCATTGTGGGTCGTTGGCACATTTTAGCTCAAAGCAGGCTCCACAACTC
FD532112       <-- ACCATTGTGGGTCGTTGGCACATTTTAGCTCAAAGCAGGCTCCACAACTC
FD540654       <-- ACCATTGTGGGTCGTTGGCACATTTTAGCTCAAAGCAGGCTCCACAACTC
FD537108       --> ..................................................
FD967289       --> ..................................................
FD566304       --> ..................................................
FD967781       --> ..................................................

               901    -    951
UN08224        --> ATACCACTGTTAAACAGAGCCGTGCTCAAGGCAGCCGTGTTAGTTCCGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971737       <-- ..................................................
FD971062       <-- ..................................................
FD562379       <-- ATACCACTGTTAAACAGAGCCGTGCTCAAGGCAGCCGTGTTAGTTCCGTA
FD532112       <-- ATACCACTGTTAAACAGAGCCGTGCTCAAGGAAGCCGTGTTAGTTCCGTA
FD540654       <-- ATACCACTGTTAAACAGAGCCGTGCTCAAGGCAGCCGTGTTAGTTCCGTA
FD537108       --> ..................................................
FD967289       --> ..................................................
FD566304       --> ..................................................
FD967781       --> ..................................................

               951    -   1001
UN08224        --> ACCTTGGCTGTAAAGGTTACCGTAACCACAAGCTCCTCCCATAGTGCCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971737       <-- ..................................................
FD971062       <-- ..................................................
FD562379       <-- ACCTTGGCTGTAAAGGTTACCGTAACCACAAGCTCCTCCCATAGTGCCGG
FD532112       <-- ACCTTGGCTGTAAAGGTTACCGTAACCACAAGCTCCTCCCATAGTGCCGG
FD540654       <-- ACCTTGGCTGTAAAGGTTACCGTAACCACAAGCTCCTCCCATAGTGCCGG
FD537108       --> ..................................................
FD967289       --> ..................................................
FD566304       --> ..................................................
FD967781       --> ..................................................

               1001   -   1051
UN08224        --> AGGCGTCGCTGCCCCCATAGAAAGTGGCGTGTGCGGTTTGCCACGCGCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971737       <-- ..................................................
FD971062       <-- ..................................................
FD562379       <-- AGGCGTCGCTGCCCCCATAGAAAGTGGCGTGTGCGGTTTGCCACGCGCCG
FD532112       <-- AGGCGTCGCTGCCCCCATAGAAAGTGGCATGTGCGGTTTGCCACGCGCCG
FD540654       <-- AGGTGTCGCTGCCCCCATAGAAAGTGGCGTGTGCGGTTTGCCACGCGCCG
FD537108       --> ..................................................
FD967289       --> ..................................................
FD566304       --> ..................................................
FD967781       --> ..................................................

               1051   -   1101
UN08224        --> CCGGAGTAGACGCCGGGGATTTTTGCGTCGGCGAGGCTGAAAAGCACAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971737       <-- ..................................................
FD971062       <-- ..................................................
FD562379       <-- CCGGAGTAGACGCCGGGGATTTTTGCGTCGGCGAGGCTGAAAAGCACAAA
FD532112       <-- CCGGAGTAGACGCCGGGGATTTTTGCGTCGGCGAGGCTGAAAAGCACAAA
FD540654       <-- CCGGAGTAGACGCCGGGGATTTTTGCGTCGGTGAGGCTGAAAAGCACAAA
FD537108       --> ..................................................
FD967289       --> ..................................................
FD566304       --> ..................................................
FD967781       --> ..................................................

               1101   -   1151
UN08224        --> TGTGGTAAAGAGAATTGCTATTTTAGTAATGGCCATTTCTGTGTGAAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971737       <-- ..................................................
FD971062       <-- ..................................................
FD562379       <-- TGTGGTAAAGAGAATTGCTATTTTAGTAATGGCCATTTCTGTGTGAAGTG
FD532112       <-- TGTGGTAAAGAGAATTGCTATTTTAGTAATGGCCATTTCTGTGTGAAGTG
FD540654       <-- TGTGGTAAAGAGAATTGCTATTTTAGTAATGGCCATTTCTGTGTGAAGTG
FD537108       --> ..................................................
FD967289       --> ..................................................
FD566304       --> ..................................................
FD967781       --> ..................................................

               1151   -   1201
UN08224        --> CTAAGAAGGGGTGTTCTAAAATTTCTATGAGGGTAGAGGAGAAGATAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971737       <-- ..................................................
FD971062       <-- ..................................................
FD562379       <-- CTAAGAAGGGGTGTTCTAAAATTTCTATGAGGGTAGAGGAGAAGATAAAG
FD532112       <-- CTAAGAAGGGGTGTTCTAAAATTTCTATGAGGGTAGAGGAGAAGATAAAG
FD540654       <-- CTAAGAAGGGGTGTTCTAAAATTTCTATGAGGGTAGAGGAGAAGATAAAG
FD537108       --> ..................................................
FD967289       --> ..................................................
FD566304       --> ..................................................
FD967781       --> ..................................................

               1201   -   1251
UN08224        --> AAAGAGCTTGCGCTCTTGTTAAAGAAAGAGTTAGGTTTTGCTACTTGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971737       <-- ..................................................
FD971062       <-- ..................................................
FD562379       <-- AAAGAGCTTGCGCTCTTGTTAAAGAAAGAGTTAGGTTTTGCTACTTGGAG
FD532112       <-- GAAGAGCTTGCGCTCTTGTTAAAGAAAGAGTTAGGTTTTGCTACTTGGAG
FD540654       <-- AAAGAGCTTGCGCTCCTGTTAAAGAAAGAGTTAGGTTTTGCTACTTGGAG
FD537108       --> ..................................................
FD967289       --> ..................................................
FD566304       --> ..................................................
FD967781       --> ..................................................

               1251   -   1301
UN08224        --> AGATGATGGTCC
                   ~~~~~~~~~~~~
FD971737       <-- ............
FD971062       <-- ............
FD562379       <-- AGATGATGGTCC
FD532112       <-- AGATGATGGTCC
FD540654       <-- AGATGATGGTCC
FD537108       --> ............
FD967289       --> ............
FD566304       --> ............
FD967781       --> ............