1      -     51
UN08255        --> GGGAAAGTCGCAGAGGAAGCTACTAAACTAAAGAGGAAGAGGAAGAGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768837       <-- GGGAAAGTCGCAGAGGAAGCTACTAAACTAAAGAGGAAGAGGAAGAGGAA
FD982666       <-- ..................................................
FD547398       <-- ..................................................
EX765023       --> GGGAAAGTCGCAGAGGAAGCTACTAAACTAAAGAGGAAGAGGAAGAGGAA
FD551516       --> GGGAAAGTCGCAGAGGAAGCTACTAAACTAAAGAGGAAGAGGAAGAGGAA
AB447933       --> ..............................................GGAA
FD986405       --> ..................................................

               51     -    101
UN08255        --> GAGGAAGCAGAGCGAAAGGAAGAGAAACAATGGAGTCACCGAAGAAGATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768837       <-- GAGGAAGCAGAGCGAAAGGAAGAGAAACAATGGAGTCACCGAAGAAGATA
FD982666       <-- ..................................................
FD547398       <-- ..................................................
EX765023       --> GAGGAAGCAGAGCGAAAGGAAGAGAAACAATGGAGTCACCGAAGAAGATA
FD551516       --> GAGGAAGCAGAGCGAAAGGAAGAGAAACAATGGAGTCACCGAAGAAGATA
AB447933       --> GAGGAAGCAGAGCGAAAGGAAGAGAAACAATGGAGTCACCGAAGAAGATA
FD986405       --> ..................................................

               101    -    151
UN08255        --> GCTCATGAGATCGGTGGCGTGAAGAGAGACGCTCTTCGATTTGGTCTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768837       <-- GCTCATGAGATCGGTGGCGTGAAGAGAGACGCTCTTCGATTTGGTCTCAA
FD982666       <-- ......gggtttgcgcagacactgttttgaggctTTCGATTTGGTCTCAA
FD547398       <-- .....................................GATTTGGTCTCAA
EX765023       --> GCTCATGAGATCGGTGGCGTGAAGAGAGACGCTCTTCGATTTGGTCTCAA
FD551516       --> GCTCATGAGATCGGTGGCGTGAAGAGAGACGCTCTTCGATTTGGTCTCAA
AB447933       --> GCTCATGAGATCGGTGGTGTCAAGAGAGACGCTCTTCGATTTGGTCTCAA
FD986405       --> ......gggtttgcgcagacactgttttgaggctTTCGATTTGGTCTCAA

               151    -    201
UN08255        --> CGGTGTTAAGAGCGACATCGTCGGATCTCACCCACTCGAATCATCTTACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768837       <-- CGGTGTTAAGAGCGACATCGTCGGATCTCACCCACTCGAATCATCTTACG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982666       <-- CGGTGTTAAGAGCGACATCGTCGGATCTCACCCACTCGAATCCTCTTACG  Raphanus raphanistrum subsp. landra
FD547398       <-- CGGTGTTAAGAGCGACATCGTCGGATCTCACCCACTCGAATCATCTTACG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765023       --> CGGTGTTAAGAGCGACATCGTCGGATCTCACCCACTCGAATCATCTTACG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD551516       --> CGGTGTTAAGAGCGACATCGTCGGATCTCACCCACTCGAATCATCTTACG  Raphanus raphanistrum subsp. raphanistrum (NY)
AB447933       --> CGGTGTTAAGAGCGACATCGTCGGATCTCACCCACTCGAATCCTCTTACG  Raphanus sativus cv Sakurajima Daikon var. niger
FD986405       --> CGGTGTTAAGAGCGACATCGTCGGATCTCACCCACTCGAATCCTCTTACG  Raphanus raphanistrum subsp. landra

               201    -    251
UN08255        --> AATCTGGAAAGAGATCGGACGAGGCGATGAAGAGGACGATCATTGGGCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768837       <-- AATCTGGAAAGAGATCGGACGAGGCGATGAAGAGGACGATCATTGGGCAT
FD982666       <-- AATCTGGAAAGAGATCGCACGAGGCGATGAAGAGGACGATCATTGGGCAT
FD547398       <-- AATCTGGAAAGAGATCGGACGAGGCGATGAAGAGGACGATCATTGGGCAT
EX765023       --> AATCTGGAAAGAGATCGGACGAGGCGATGAAGAGGACGATCATTGGGCAT
FD551516       --> AATCTGGAAAGAGATCGGACGAGGCGATGAAGAGGACGATCATTGGGCAT
AB447933       --> AATCTGGAAAGAGATCGGACGAGGCGATGAAGAGGACGATCATTGGGCAT
FD986405       --> AATCTGGAAAGAGATCGCACGAGGCGATGAAGAGGACGATCATTGGGCAT

               251    -    301
UN08255        --> ACCTACGGGACTGCACTTCCACTGAAGATGGATATGGACACGCAAATTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768837       <-- ACCTACGGGACTGCACTTCCACTGAAGATGGATATGGACACGCAAATTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982666       <-- ACCTACGGGACTGCACTTCCACTGAAGATGGACATGGACAGGCAAATTCT  Raphanus raphanistrum subsp. landra
FD547398       <-- ACCTACGGGACTGCACTTCCACTGAAGATGGATATGGACACGCAAATTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765023       --> ACCTACGGGACTGCACTTCCACTGAAGATGGATATGGACACGCAAATTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD551516       --> ACCTACGGGACTGCACTTCCACTGAAGATGGATATGGACACGCAAATTCT  Raphanus raphanistrum subsp. raphanistrum (NY)
AB447933       --> ACCTACGGGACTGCACTTCCACTGAAGATGGACATGGACAGGCAAATTCT  Raphanus sativus cv Sakurajima Daikon var. niger
FD986405       --> ACCTACGGGACTGCACTTCCACTGAAGATGGACATGGACAGGCAAATTCT  Raphanus raphanistrum subsp. landra

               301    -    351
UN08255        --> CTCTAGGTTTCAGAGACCTCCTGGACCAATTCCTTCGTCAATGCTCGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768837       <-- CTCTAGGTTTCAGAGACCTCCTGGACCAATTCCTTCGTCAATGCTCGGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982666       <-- CTCTAGGTTTCAGAGACCTCCTGGACCAATTCCTTCGTCAATGCTTGGTT  Raphanus raphanistrum subsp. landra
FD547398       <-- CTCTAGGTTTCAGAGACCTCCTGGACCAATTCCTTCGTCAATGCTCGGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765023       --> CTCTAGGTTTCAGAGACCTCCTGGACCAATTCCTTCGTCAATGCTCGGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD551516       --> CTCTAGGTTTCAGAGACCTCCTGGACCAATTCCTTCGTCAATGCTCGGTT  Raphanus raphanistrum subsp. raphanistrum (NY)
AB447933       --> CTCTAGGTTTCAGAGACCTCCTGGACCAATTCCTTCGTCAATGCTTGGTT  Raphanus sativus cv Sakurajima Daikon var. niger
FD986405       --> CTCTAGGTTTCAGAGACCTCCTGGACCAATTCCTTCGTCAATGCTTGGTT  Raphanus raphanistrum subsp. landra

               351    -    401
UN08255        --> TAGAAGTCTACACAGGAGCCGTTGATGACTTTGGTTTTGAGGATTACTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768837       <-- TAGAAGTCTACACAGGAGCCGTTGATGACTTTGGTTTTGAGGATTACTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982666       <-- TAGAAGTCTACACAGGAGCCATTGATGACTTTGGTTTTGAGGATTACTTG  Raphanus raphanistrum subsp. landra
FD547398       <-- TAGAAGTCTACACAGGAGCCGTTGATGACTTTGGTTTTGAGGATTACTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765023       --> TAGAAGTCTACACAGGAGCCGTTGATGACTTTGGTTTTGAGGATTACTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD551516       --> TAGAAGTCTACACAGGAGCCGTTGATGACTTTGGTTTTGAGGATTACTTG  Raphanus raphanistrum subsp. raphanistrum (NY)
AB447933       --> TAGAAGTCTACACAGGAGCCATTGATGACTTTGGTTTTGAGGATTACGTG  Raphanus sativus cv Sakurajima Daikon var. niger
FD986405       --> TAGAAGTCTACACAGGAGCCATTGATGACTTTGGTTTTGAGGATTACTTG  Raphanus raphanistrum subsp. landra

               401    -    451
UN08255        --> AATGACCCTCGTGACTCGGAGACATTCAAGCCCGTAGACTTCCACCACGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768837       <-- AATGACCCTCGTGACTCGGAGACATTCAAGCCCGTAGACTTCCACCACGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982666       <-- AATGACCCTCGTGACTCGGAGACATTCAAGCCCGTAGATTTCCACCACGG  Raphanus raphanistrum subsp. landra
FD547398       <-- AATGACCCTCGTGACTCGGAGACATTCAAGCCCGTAGACTTCCACCACGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX765023       --> AATGACCCTCGTGACTCGGAGACATTCAAGCCCGTAGACTTCCACCACGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD551516       --> AATGACCCTCGTGACTCGGAGACATTCAAGCCCGTAGACTTCCACCACGG  Raphanus raphanistrum subsp. raphanistrum (NY)
AB447933       --> AATGACCCTCGTGACTCGGAGACATTCAAGCCCGTAGATTTCCACCACGG  Raphanus sativus cv Sakurajima Daikon var. niger
FD986405       --> AATGACCCTCGTGACTCGGAGACATTCAAGCCCGTAGATTTCCACCACGG  Raphanus raphanistrum subsp. landra

               451    -    501
UN08255        --> GATGGAAGTTCGTCTTGGCATGTCAAAGGGCCCTGTTGCCCCAAGTTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768837       <-- GATGGAAGTTCGCCTTGGCATGTCAAAGGGCCCTGTTGCCCCAAGTTTCA
FD982666       <-- GATGGAAGTTCGTCTTGGCATGTCAAAGGGCCCTGTTGCCCCAAGTTTCA
FD547398       <-- GATGGAAGTTCGTCTTGGCATGTCAAAGGGCCCTGTTGCCCCAAGTTTCA
EX765023       --> GATGGAAGTTCGCCTTGGCATGTCAAAGGGCCCTGTTGCCCCAAGTTTCA
FD551516       --> GATGGAAGTTCGTCTTGGCATGTCAAAGGGCCCTGTTGCCCCAAGTTTCA
AB447933       --> GATGGAAGTTCGTCTTGGCATGTCAAAGGGCCCTGTTGCCCCAAGTTTCA
FD986405       --> GATGGAAGTTCGTCTTGGCATGTCAAAGGGCCCTGTTGCCCCAAGTTTCA

               501    -    551
UN08255        --> TGTAAGGCCCCCCTATCATGGGTGGGGTTTTATTGCATGTTATGTCTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768837       <-- TGTAAGGCCCCCCTATCATGGGTGGGGTTTTATTGCATGTTATGTCTTTT
FD982666       <-- TGTAAGGCCCCCCTATCATGGGTGGGGTTTTATTGCATGTTATGTCTTTT
FD547398       <-- TGTAAGGCCCCCCTATCATGGGTGGGGTTTTATTGCATGTTATGTCTTTT
EX765023       --> TGTAAGGCCCCCCTATCATGGGTGGGGTTTTATTGCATGTTATGTCTTTT
FD551516       --> TGTAAGGCCCCCCTATCATGGGTGGGGTTTTATTGCATGTTATGTCTTTT
AB447933       --> TGTAAGGCCCCCCTATCATGGGTGGGGTTTTATTGCATGTTATGTCTTTT
FD986405       --> TGTAAGGCCCCCCTATCATGGGTGGGGTTTTATTGCATGTTATGTCTTTT

               551    -    601
UN08255        --> TAGATTTTGAATGATGAATCAAGTGGGATCGTTTTATAAACTTCTTTCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768837       <-- TAGATTTTGAATGATGAATCAAGTGGGATCGTTT................
FD982666       <-- TAGATTTTGAATGATGAATCAAGTGGGATCGTTTTATAA-CTTCTTTCTA
FD547398       <-- TAGATTTTGAATGATGAATCAAGTGGGATCGTTTTATAAACTTCTTTCTA
EX765023       --> TAGATTTTGAATGATGAATCAAGTGGGATCGTTTTAT.............
FD551516       --> TAGATTTTGAATGATGAATCAAGTGGGATCGTTTTATAAACTTCTTTCTA
AB447933       --> TAGATTTTGAATGATGAATCAAGTGGGATCGTTT................
FD986405       --> TAGATTTTGAATGATGAATCAAGTGGGATCGTTTTATAA-CTTCTTTCTA

               601    -    651
UN08255        --> CTTGTACTCTCTCTTGAGTCCTTGACCCAAGTTTGAAGTATGTTGAGACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768837       <-- ..................................................
FD982666       <-- CTTG..............................................
FD547398       <-- CTTGTACTCTCTCTTGAGTCCTTGACCCAAGTTTGAAGTATGTTGAGACA
EX765023       --> ..................................................
FD551516       --> CTTGTACTCTCTCTTGAGTCCTTGACCCAAGTTTGAAGTATGTTGAGACA
AB447933       --> ..................................................
FD986405       --> CTTGc.............................................

               651    -    701
UN08255        --> ACTACTGAATATGGTCAATCAATTCTAGTATGTTAGGTTTTACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX768837       <-- ............................................
FD982666       <-- ............................................
FD547398       <-- ACTACTGAATATGGTCAATCAATTCTAGTATGTTAGGTTTTACG
EX765023       --> ............................................
FD551516       --> ACTACTGAATATGGTCAATCAATTCTAGTATGTTAGGTTTTACG
AB447933       --> ............................................
FD986405       --> ............................................