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Alignment for radish unigene UN08311

               1      -     51
UN08311        --> AAGAGAAAGATTTAGCATAAAGAATCAAACAAAGGTATAATGGGTTTTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965709       <-- ..................................................
EX770270       <-- ..................................................
EX771262       <-- ..................................................
EV566667       <-- ..................................................
EV571746       --> AAGAGAAAGATTTAGCATAAAGAATCAAACAAAGGTATAATGGGTTTTAT
FD544383       --> ......................gATCAAACAAAGGTATAATGGGTTTTAT
EX751977       --> ..............................cgAGGTATAATGGGTTTTAT
EX774499       --> ................................AGGTATAATGGGTTTTAT
EV530755       --> .................................GGTATAATGGGTTTTAT
FD958537       --> .................................GGTATAATGGGTTTTAT
EX775332       --> ......................................AATGGGTTTTAT
FD547194       --> .........................................GGGTTTTAT

               51     -    101
UN08311        --> GATATATTATTATAACTTCTTTTGTTTTTCTTAAAATCTTATTTCGTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965709       <-- ..................................................
EX770270       <-- ..................................................
EX771262       <-- ..................................................
EV566667       <-- ..................................................
EV571746       --> GATATATTATTATAACTTCTTTTGTTTTTCTTAAAATCTTATTTCGTGAA
FD544383       --> GATATATTATTATAACTTCCTTTGTTTTTCTTAAAATCTTATTTCGTGAA
EX751977       --> GATATATTATTATAACTTCTTTTGTTTTTCTTAAAATCTTATTTCGTGAA
EX774499       --> GATATATTATTATAACTTCTTTTGTTTTTCTTAAAATCTTATTTCGTGAA
EV530755       --> GATATATTATTATAACTTCTTTTGTTTTTCTTAAAATCTTATTTCGTGAA
FD958537       --> GATATATTATTATAACTTCTTTTGTTTTTCTTAAAATCTTATTTCGTGAA
EX775332       --> GATATATTATTATAACTTCTTTTGTTTTTCTTAAAATCTTATTTCGTGAA
FD547194       --> GATATATTATTATAACTTCTTTTGTTTTTCTTAAAATCTTATTTCATGAA

               101    -    151
UN08311        --> AACTGAAAATAAAATGACTTTCATTATAATTAGGTTATTCTTGCACACTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965709       <-- ..................................................
EX770270       <-- ..................................................
EX771262       <-- ..................................................
EV566667       <-- ..................................................
EV571746       --> AACTGAAAATAAAATGACTTTCATTATAATTAGGTTATTCTTGCACACTA
FD544383       --> AACTGAAAATAAAATGACTTTCATTATAATTAGGTTATTCTTGCACACTA
EX751977       --> AACTGAAAATAAAATGACTTTCATTATAATTAGGTTATTCTTGCACACTA
EX774499       --> AACTGAAAATAAAATGACTTTCATTATAATTAGGTTATTCTTGCACACTA
EV530755       --> AACTTAAAATAAAATGACTTTCATTATAATTAGGTTATTCTTGCACACTA
FD958537       --> AACTGAAAATAAAATGACTTTCATTATAATTAGGTTATTCTTGCACACTA
EX775332       --> AACTGAAAATAAAATGACTTTCATTATAATTAGGTTATTCTTGCACACTA
FD547194       --> AACTGAAAATAAAATGACTTTCATTATAATTAGGTTATTCTTGCACACTA

               151    -    201
UN08311        --> TTACTTGGTTTAGAGCCTTGAGGGCATTCCTCCAGCGACGACCAAAGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965709       <-- ................................CAGCGACGACCAAAGTTT
EX770270       <-- ..................................................
EX771262       <-- ..................................................
EV566667       <-- ..................................................
EV571746       --> TTACTTGGTTTAGAGCCTTGAGGGCATTCCTCCAGCGACGACCAAAGTTT
FD544383       --> TTACTTGGTTTAGAGCCTTGAGGGCATTCCTCCAGCGACGACCAAAGTTT
EX751977       --> TTACTTGGTTTAGAGCCTTGAGGGCATTCCTCCAGCGACGACCAAAGTTT
EX774499       --> TTACTTGGTTTAGAGCCTTGAGGGCATTCCTCCAGCGACGACCAAAGTTT
EV530755       --> TTACTTGGTTTAGAGCCTTGAGGGCATTCCTCCAGCGACGACCAAAGTTT
FD958537       --> TTACTTGGTTTAGAGCCTTGAGGGCATTCCTCCAGCGACGACCAAAGTTT
EX775332       --> TTACTTGGTTTAGAGCCTTGAGGGCATTCCTCCAGCGACGACCAAAGTTT
FD547194       --> TTACTTGGTTTAGAGCCTTGAGGGCATTCCTCCAGCGACGACCAAAGTTT

               201    -    251
UN08311        --> CACCGGTGATGTAAGAAGAATCATCAGATGCTAAGAAAGCCGCAGCAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965709       <-- CACCGGTGATGTAAGAAGAATCATCAGATGCTAAGAAAGCCGCAGCAGCA
EX770270       <-- ..................................................
EX771262       <-- ..................................................
EV566667       <-- ..................................................
EV571746       --> CACCGGTGATGTAAGAAGAATCATCAGATGCTAAGAAAGCCGCAGCAGCA
FD544383       --> CACCGGTGATGTAAGAAGAATCATCAGATGCTAAGAAAGCCGCAGCAGCA
EX751977       --> CACCGGTGATGTAAGAAGAATCATCAAATGCTAAGAAAGCCGCAGCAGCA
EX774499       --> CACCGGTGATGTAAGAAGAATCATCAGATGCTAAGAAAGCCGCAGCAGCA
EV530755       --> CACCGGTGATGTAAGAAGAATCATCAGATGCTAAGAAAGCCGCAGCAGCA
FD958537       --> CACCGGTGATGTAAGAAGAATCATCAGATGCTAAGAAAGCCGCAGCAGCA
EX775332       --> CACCGGTGATGTAAAAAAAATCATCAAATGCTAAAAAAGCCGCAGCAGCA
FD547194       --> CACCGGTGATGTAAGAAGAATCATCAGATGCTAAGAAAGCCGCAGCAGCA

               251    -    301
UN08311        --> GCCATGTCTCCTGTTGTTCCCAACCTGTTAAGCAGAGTCTTCTCTTCGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965709       <-- GCCATGTCTCCTGTTGTTCCCAACCTGTTAAGCAGAGTCTTCTCTTCGAT
EX770270       <-- ............................TAAGCAGAGTCT-CTCTTCGAT
EX771262       <-- ..................................................
EV566667       <-- ..................................................
EV571746       --> GCCATGTCTCCTGTTGTTCCCAACCTGTTAAGCAGAGTCTTCTCTTCGAT
FD544383       --> GCCATGTCTC-TGTTGTTCCCAACCTGTTAAGCAGAGTCTTCTCTTCGAT
EX751977       --> GCCATGTCTCCTGTTGTTCCCAACCTGTTAAGCAGAGTCTTCTCTTCGAT
EX774499       --> GCCATGTCTCCTGTTGTTCCCAACCTGTTAAGCAGAGTCTTCTCTTCGAT
EV530755       --> GCCATGTCTCCTGTTGTTCCCAACCTGTTAAGCAGAGTCTTCTCTTCGAT
FD958537       --> GCCATGTCTCCTGTTGTTCCCGA-CTGTTAAGCAGAGTCTTCTCTTCGAT
EX775332       --> GCCATGTCTCCTGTTGTTCCCAACCTGTTAAGCAAAGTCTTCTCTTCGAT
FD547194       --> GCCATGTCTCCTGTTGTTCCCAACCTGTTAAGCAGAATCTTCTCTTCGAT

               301    -    351
UN08311        --> GCTCTCCCTCACTTGGGAGTTTCCGGTGATGAAAGAAGCAAAGTGTGTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965709       <-- GCTCTCCCTCACTTGGGAGTTTCCGGTGATGAAAGAAGCAAAGTGTGTGG
EX770270       <-- GCTCTCCCTCACTTGGGAGTTTCCGGTGATGAAAGAAGCAAAGCGTGTGG
EX771262       <-- ..................................................
EV566667       <-- ..................................................
EV571746       --> GCTCTCCCTCACTTGGGAGTTTCCGGTGATGAAAGAAGCAAAGTGTGTGG
FD544383       --> GCTCTCCCTCACTTGGGAGTTTCCGGTGATGAAAGAAGCAAAGTGTGTGG
EX751977       --> GCTCTCCCTCACTTGGGAGTTTCCGGTGATGAAAGAAGCAAAGTGTGTGG
EX774499       --> GCTCTCCCTCACTTGGGAGTTTCCGGTGATGAAAGAAGCAAAGCGTGTGG
EV530755       --> GCTCTCCCTCACTTGGGAGTTTCCGGTGATGAGAGAAGCAAAGTGTGTGG
FD958537       --> GCTCTCCCTCACTTGGGAGTTTCCGGTGATGAAAGAAGCAAAGTGTGTGG
EX775332       --> GCTCTCCCTCACTTGGGAGTTTCCGGGGATGAAAGAAGCAAAGTGTGTGG
FD547194       --> GCTCTCCCTCACTTGGGAGTTTCCGGTGATGAAAGAAGCAAAGTGTGTGG

               351    -    401
UN08311        --> GCACAAAACCGGGAGCAACCGCGTTGACACGTGTGTCCGGACCCATCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965709       <-- GCACAAAACCGGGAGCAACCGCGTTGACACGTGTGTCCGGACCCATCTCA
EX770270       <-- GCACAAAACCGGGAGCAACCGCGTTGACACGTGTGTCCGGACCCATCTCA
EX771262       <-- ..................................................
EV566667       <-- ..................................................
EV571746       --> GCACAAAACCGGGAGCAACCGCGTTGACACGTGTGTCCGGACCCATCTCA
FD544383       --> GCACAAAACCGGGAGCAATCGCGTTGACACGTGTGTCCGGACCCATCTCA
EX751977       --> GCACAAAACCGGGAGCAACCGCGTTGACACGTGTGTCCGGACCCATCTCA
EX774499       --> GCACAAAACCGGGAGCAACCGCGTTGACACGTGTGTCCGGACCCATCTCA
EV530755       --> GCACAAAACCGGGAGCAACCGCGTTGACACGTGTGTCCGGACCCATCTCA
FD958537       --> GCACAAAACCGGGAGCAACCGCGTTGACACGTGTGTCCGGACCCATCTCA
EX775332       --> GCACAAAACCGGGAGCAACCGCGTTGACACGTGTGTCCGGACCCATCTCA
FD547194       --> GCACAAAGCCGGGAGCAACCGCGTTGACACGTGTGTCCGGACCCATCTCA

               401    -    451
UN08311        --> GCAGCAAGAGCCTTGGTTAGTCCGAGAAGAGCAGTCTTAGTGACACCATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965709       <-- GCAGCAAGAGCCTTGGTTAGTCCGAGAAGAGCAGTCTTAGTGACACCATA
EX770270       <-- GCAGCAAGAGCCTTGGTTAGTCCGAGAAGAGCAGTCTTAGTGACACCATA
EX771262       <-- .......aagagcttGTTAGTCCGAGAAGAGCAGTCTTAGTGACACCATA
EV566667       <-- ..................................................
EV571746       --> GCAGCAAGAGCCTTGGTTAGTCCGAGAAGAGCAGTCTTAGTGACACCATA
FD544383       --> GCAGCAAGAGCCTTGGTTAGTCCGAGAAGAGCAGTCTTAGTGACACCATA
EX751977       --> GCAGCAAAAGCCTTGGTTAGTCCGAGAAGAGCAGTCTTAGTGACACCATA
EX774499       --> GCAGCAAGAGCCTTGGTTAGTCCGAGAAGAGCAGTCTTAGTGACACCATA
EV530755       --> GCAGCAAGAGCCTTGGTTAGTCCGAGAAGAGCAGTCTTAGTGACACCATA
FD958537       --> GCAGCAAGAGCCTTGGTTAGTCCGAAAAGAGCAGTCTTAGTGACACCATA
EX775332       --> GCAGCAAGAGCCTTGGTTAGTCCGAAAAAAGCAGTCTTAGTGACACCATA
FD547194       --> ACAGCAAGAGCCTTGGTTAGTCCG..........................

               451    -    501
UN08311        --> CATAGCCATGGAACCTTGTGGTTGAAATCCAGCGATGGAAGTAATGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965709       <-- CATAGCCATGGAACCTTGTGGTTGAAATCCAGCGATGGAAGTAATGAAGA
EX770270       <-- CATAGCCATGGAACCTTGTGGTTGAAATCCAGCGATGGAAGTAATGAAGA
EX771262       <-- CATAGCCATGGAACCTTGTGGTTGAAA-CCAGCGATGGAAGTAATGAAGA
EV566667       <-- ..................................................
EV571746       --> CATAGCCATGGAACCTTGTGGTTGAAACCCAGCGATGGAAGTAATGAAGA
FD544383       --> CATAGCCATGGAACCTTGTGGTTGAAATCCAGCGATGGAAGTAATGAAGA
EX751977       --> CATAGCCATGGAACCTTGTGGTTGAAATCCAGCGATGGAAGTAATGAAGA
EX774499       --> CATAGCCATGGAACCTTGTGGTTGAAATCCAGCGATGGAAGTAATGAAGA
EV530755       --> CATAGCCATGGAACCTTGTGGTTGAAATCCAGCGATGGAAGTAATGAAGA
FD958537       --> CATAGCCATGGAACCTTGTGGTTGAAATCCAGCGATGGAAGTAATGAAGA
EX775332       --> CATAGCCATGGAACCTTGTGGTTGAAATCCAGCGATGGAAGTAATGAAGA
FD547194       --> ..................................................

               501    -    551
UN08311        --> TAACAGAAGAACCCTTCTCTAAGTGAGGAGCCATATCCTGAAGGAGAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965709       <-- TAACAGAAGAACCCTTCTCTAAGTGAGGAGCCATATCCTGAAGGAGAAGT
EX770270       <-- TAACAGAAGAACCCTTCTCTAAGTGAGGAGCCATATCCTGAAGGAGAAGT
EX771262       <-- TAACAGAAGAACCCTTCTCTAAGTGAGGAGCCATATCCTGAAGGAGAAGT
EV566667       <-- ..............................CCATATCCTGAAGGAGAAGT
EV571746       --> TAACAGAAGAACCCTTCTCTAAGTGAGGAGCCATATCCTGAAGGAGAAGT
FD544383       --> TAACAGAAGAACCCTTCTCTAAGTGAGGAGCCATATCCTGAAGGAGAAGT
EX751977       --> TAACAGAAGAACCCTTCTCTAAGTGAGGAGCCATATCCTGAAGGAGAAGT
EX774499       --> TAACAGAAGAACCCTTCTCTAAGTGAGGAGCCATATCCTGAAGGAGAAGT
EV530755       --> TAACAGAAGAACCCTTCTCTAAGTGAGGAGCCATATCCTGAAGGAGAAGT
FD958537       --> TAACAGAAGAACCCTTCTCTAAGTGAGGAGCCATATCCTGAAGGAGAAGT
EX775332       --> TAAC..............................................
FD547194       --> ..................................................

               551    -    601
UN08311        --> ATAGAGGATTTGACATTGATTTCCCAAAGCTTGTCGAGGACAGCTTCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965709       <-- ATAGAGGATTTGACATTGATTTCCCAAAGCTTGTCGAGGACAGCTTCTTT
EX770270       <-- ATAGAGGATTTGACATTGATTTCCCAAAGCTTGTCGAGGACAGCTTCTTT
EX771262       <-- ATAGAGGATTTGACATTGATTTCCCAAAGCTTGTCGAGGACAGCTTCTTT
EV566667       <-- ATAGAGGATTTGACATTGATTTCCCAAAGCTTGTCGAGGACAGCTTCTTT
EV571746       --> ATAGAGGATTTGACATTGATTTCCCAAAGCTTGTCGAGGACAGCTTCTTT
FD544383       --> ATAGAGGATTTGACATTGATTTCCCAAAGCTTGTCGAGGACAGCTTCTTT
EX751977       --> ATAGAGGATTTGACATTGATTTCCCAAAGCTTGTCGAGGACAGCTTCTTT
EX774499       --> ATAGAGGATTTGACATTGATTTCCCAAAGCTTGTCGAGGACAGCTTCTTT
EV530755       --> ATAGAGGATTTGACATTGATTTCCCAAAGCTTGTCGAGGACAGCTTCTTT
FD958537       --> ATAGAGGATTTGACATTGATTTCCCAAAGCTTGTCGAGGACAGCTTCTTT
EX775332       --> ..................................................
FD547194       --> ..................................................

               601    -    651
UN08311        --> GGTGGACAAGATCGGGTCCGTAGATGGATTAGCAGCGGCGTTACAGACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965709       <-- GGTGGACAAGATCGGGTCCGTAGATGGATTAGCAGCGGCGTTACAGACAA
EX770270       <-- GGTGGACAAGATCGGGTCCGTAGATGGATTAGCAGCGGCGTTACAGACAA
EX771262       <-- GGTGGACAAGATCGGGTCCGTAGATGGATTAGCAGCGGCGTTACAGACAA
EV566667       <-- GGTGGACAAGATCGGGTCCGTAGATGGATTAGCAGCGGCGTTACAGACAA
EV571746       --> GGTGGACAAGATCGGGTCCGTAGATGGATTAGCAGCGGCGTTACAGACAA
FD544383       --> GGTGGACAAGATCGGGTCCGTAGATGGATTAGCAGCGGCGTTACAGACAA
EX751977       --> GGTGGACAAGATCGGGTCCGTAGATGGATTAGCAGCGGCGTTACAGACAA
EX774499       --> GGTGGACAAGATCGGGTCCGTAGATGGATTAGCAGCGGCGTTACAGACAA
EV530755       --> GGTGGACAAGATCGGGTCCGTAGATGGATTAGCAGCGGCGTTACAGACAA
FD958537       --> GGTGGACAAGATCGGGTCCGTAGATGGA......................
EX775332       --> ..................................................
FD547194       --> ..................................................

               651    -    701
UN08311        --> CGATATCTATCTTTCCATATTTCTGAACAGTTTTTTCGACAAGATCTCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965709       <-- GGATATCTATCTTTCCATATTTCTGAACAGTTTTTTCGACAAGATCTCGG
EX770270       <-- CGATATCTATCTTTCCATATTTCTGAACAGTTTTTTCGACAAGATCTCGG
EX771262       <-- CGATATCTATCTTTCCATATTTCTGAACAGTTTTTTCGACAACATCTCGG
EV566667       <-- CGATATCTATCTTTCCATATTTCTGAACAGTTTTTTCGACAAGATCTCGG
EV571746       --> CGATATCTATCTTTCCATATTTC...........................
FD544383       --> CGATATCTATCTTTCCATATTTCTGAACAGTTTTTTCGACAAGATCTCGG
EX751977       --> CGATATCTATCTTTCCATATTTCTGAACAGTTTTTTCGACAAGATCTCGG
EX774499       --> CGATATCTATCTTTCCATATTTCTGAACAGTTTTTTCGACAAGATCTCGG
EV530755       --> CGATATCTATCTTTCCATATTTCTGAACAGTTTTTTCGACAAGATCTCGG
FD958537       --> ..................................................
EX775332       --> ..................................................
FD547194       --> ..................................................

               701    -    751
UN08311        --> CGATGTTGAGCATTGGAAACATGACAGACGATTCCATAAGCATCAATCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965709       <-- CGATGTTGAGCATTGGAAACATGACAGACGATTCCATAAGCATCGATCCC
EX770270       <-- CGATGTTGAGCATTGGAGACATGACAGACGATTCCATAAGCATCAATCCC
EX771262       <-- CGATGTTGAGCATTGGAAACATGACAGACGATTCCATAAGCATCAATCCC
EV566667       <-- CGATGTTGAGCATTGGAAACATGACAGACGATTCCATAAGCATCAATCCC
EV571746       --> ..................................................
FD544383       --> CGATGTTGAGCATTGGAAACATGACAGACGATTCCATAAGCATCGATCCC
EX751977       --> CGATGTTGAGCATTGGAAACATGACAGACGATTCCATAAGCATCAATCCC
EX774499       --> CGATGTTGAGCATTGGAGACATGACAGACGATTCCATAAGCATCAATCCC
EV530755       --> CGATGTTGAGCATTGGAAACATGACAGACGATTCCATAAGCATCAATCCC
FD958537       --> ..................................................
EX775332       --> ..................................................
FD547194       --> ..................................................

               751    -    801
UN08311        --> TTTGGATTTGAGCTTTTCTACTGCTTCCTCAACATTTGCCTGCTTGCGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965709       <-- TTTGGATTTGAGCTTTTCTACTGCTTCCTCAACATTTGCCTGCTTGCGGG  Raphanus raphanistrum subsp. maritimus
EX770270       <-- TTTGGATTTGAGCTTTTCAACTGCTTCCTCAACATTTGCCTGCTTGCGGG  Raphanus raphanistrum subsp. landra
EX771262       <-- TTTGGATTTGAGCTTTTCAACTGCTTCCTCAACATTTGCCTGCTTGCGGG  Raphanus raphanistrum subsp. landra
EV566667       <-- TTTGGATTTGAGCTTTTCAACTGCTTCCTCAACATTTGCCTGCTTGCGGG  Raphanus raphanistrum subsp. landra
EV571746       --> ..................................................  Raphanus raphanistrum subsp. landra
FD544383       --> TTTGGATTTGAGCTTTTCTACTGCTTCCTCAACATTTGCCTGCTTGCGGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX751977       --> TTTTGATTTGAGTTTTTCTACTGCTTCCTCAACATTTGCCTGCTTGCG..  Raphanus raphanistrum subsp. maritimus
EX774499       --> TTTGGATTTGAGCTTTTCAACTGCTTCCTCAACATTTGCCTGCTTGCGGG  Raphanus raphanistrum subsp. landra
EV530755       --> TTTTGATTTGAGTTTTTCTACTGCTTCCTCAACATTTGCCTGCTTGCGGG  Raphanus raphanistrum subsp. maritimus
FD958537       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX775332       --> ..................................................  Raphanus raphanistrum subsp. landra
FD547194       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               801    -    851
UN08311        --> AAGAAACGACGACGGAAGCGCCTTCGAGACCGAAACGCTCGATGATACCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965709       <-- AAGAAACGACGACGGAAGCGCCTTCGAGACCGAAACGCTCGATGATAC..
EX770270       <-- GAGAAACGACGACGGAAGCGCCTTCGAGACCGAAACGCTCGATGATACCG
EX771262       <-- AAGAAACGACGACGGAAACGCCTTCGAGACCGAAACGCTCGATGATACCG
EV566667       <-- AAGAAACGACGACGGAAGCGCCTTCGAGACCGAAACGCTCGATGATACCG
EV571746       --> ..................................................
FD544383       --> AAGAAACGAC........................................
EX751977       --> ..................................................
EX774499       --> GAGAAACGACGACGGA-GCGCCTTCGAGACCGAAACGCTCGATGATACCG
EV530755       --> AAGAAACGACGACGGAAGCGCCTTCGAGACCGAAACGCTCGATGATACCG
FD958537       --> ..................................................
EX775332       --> ..................................................
FD547194       --> ..................................................

               851    -    901
UN08311        --> AAGCCGATCCCTTGCGTCGAAGCCGTTACTATCGCCACCTTCCCTTCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965709       <-- ..................................................
EX770270       <-- AAGCCGATCCCTTGCGTCGAAGCCGTTACTATCGCCACCTTCCCTTCCAA
EX771262       <-- AAGCCGATCCCTTGCGTCGAAGCCGTTACTATCGCCACCTTCCCTTCCAA
EV566667       <-- AAGCCGATCCCTTGCGTCGAAGCCGTTACTATCGCCACCTTCCCTTCCGA
EV571746       --> ..................................................
FD544383       --> ..................................................
EX751977       --> ..................................................
EX774499       --> AAGCCGATCCCTTGCGTCGAAGCCGT-ACTATCGCC-CCT-CCCT-CCAA
EV530755       --> AAGCCGATCCCTTGCGTCGAGGCCGTTACTATCGCCAC............
FD958537       --> ..................................................
EX775332       --> ..................................................
FD547194       --> ..................................................

               901    -    951
UN08311        --> TCTCCTCGCTGCTATCTTCTTCCCCTCCATTTCTCTCTCACGTCTTTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965709       <-- ..................................................
EX770270       <-- TCTCCTCGCTGCTATCTTCTTCCCCTCCATTTCTCTCTCACGTCTTTTTT
EX771262       <-- TCTCCTCGCTGCTATCTTCTTCCCCTCCATTTCTCTCTCACGTCTTCTTT
EV566667       <-- TCTCCTCGCTGCTATCTTCTTCCCCTCCATTTCTCTCTCACGTCTTTTTT
EV571746       --> ..................................................
FD544383       --> ..................................................
EX751977       --> ..................................................
EX774499       --> TCTCCTCGCTGCTATCT-CTTCCCtc........................
EV530755       --> ..................................................
FD958537       --> ..................................................
EX775332       --> ..................................................
FD547194       --> ..................................................

               951    -   1001
UN08311        --> TTTTCTTCCCAACTTCTCTCTCTTAGCCGATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD965709       <-- .................................
EX770270       <-- TTTTCTTCCCAACTTCTCTCTCTTAGCCGATCC
EX771262       <-- TTTTCTTCCCAACTTCTCTCTCTTAGCCGATCC
EV566667       <-- TTTTCTTCCCAACTTCTCTCTCTTAGCCGATCC
EV571746       --> .................................
FD544383       --> .................................
EX751977       --> .................................
EX774499       --> .................................
EV530755       --> .................................
FD958537       --> .................................
EX775332       --> .................................
FD547194       --> .................................