1      -     51
UN08384        --> GGGGTGAACTTAATAGTCGATATGTTTAGGGAAAATATATTGGTCTTGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529327       <-- .GGGTGAACTTAATAGTCGATATGTTTAGGGAAAATATATTGGTCTTGAC
FD554063       <-- ...ggGAACTTAATAGTCGATATGTTTAGGGAAAATATATTGGTCTTGAC
EV541840       <-- ..................................................
EY904674       <-- ..................................................
FD538966       <-- ..................................................
FD966534       <-- ..................................................
EX763899       --> GGGGTGAACTTAATAGTCGATATGTTTAGGGAAAATATATTGGTCTTGAC
EV566412       --> .GGGTGAACTTAATAGTCGATATGTTTAGGGAAAATATATTGGTCTTGAC
EW724856       --> .GGGTGAACTTAATAGTCGATATGTTTAGGGAAAATATATTGGTCTTGAC
EW735086       --> .GGGTGAACTTAATAGTCGATATGTTTAGGGAAAATATATTGGTCTTGAC
EX762146       --> .GGGTGAACTTAATAGTCGATATGTTTAGGGAAAATATATTGGTCTTGAC
EX763380       --> .GGGTGAACTTAATAGTCGATATGTTTAGGGAAAATATATTGGTCTTGAC
EX770913       --> .GGGTGAACTTAATAGTCAATATGTTTAGGGAAAATATATTGGTCTTGAC
EX895621       --> .GGGTGAACTTAATAGTCGATATGTTTAGGGAAAATATATTGGTCTTGAC
EY938562       --> .GGGTGAACTTAATAGTCGATATGTTTAGGGAAAATATATTGGTCTTGAC
FD533020       --> .GGGTGAACTTAATAGTCGATATGTTTAGGGAAAATATATTGGTCTTGAC
FD543055       --> .GGGTGAACTTAATAGTCGATATGTTTAGGGAAAATATATTGGTCTTGAC
FD964974       --> .GGGTGAACTTAATAGTCGATATGTTTAGGGAAAATATATTGGTCTTGAC
FD970088       --> .GGGTGAACTTAATAGTCGATATGTTTAGGGAAAATATATTGGTCTTGAC
EX890035       --> ...ggGAACTTAATAGTCGATATGTTTAGGGAAAATATATTGGTCTTGAC
EY900813       --> ...ggGAACTTAATAGTCGATATGTTTAGGGAAAATATATTGGTCTTGAC
FD558097       --> ...ggGAACTTAATAGTCGATATGTTTAGGGAAAATATATTGGTCTTGAC

               51     -    101
UN08384        --> ATTATTTTCCATTTATTGGCTTTCATCAGCGGCTGGACAAAACAAATCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529327       <-- ATTATTTTCCATTTATTGGCTTTCATCAGCGGCCGGACAAAACAAATCCT
FD554063       <-- ATTATTTTCCATTTATTGGCTTTCATCAGCGTCTGGACAAAACAAATCCT
EV541840       <-- ..................................................
EY904674       <-- ..................................................
FD538966       <-- ..................................................
FD966534       <-- ..................................................
EX763899       --> ATTATTTTCCATTTATTGGCTTTCATCAGCGGCTGGACAAAACAAATCCT
EV566412       --> ATTATTTTCCATTTATTGGCTTTCATCAGCGGCTGGACAAAACAAATCCT
EW724856       --> ATTATTTTCCATTTATTGGCTTTCATCAGCGGCTGGACAAAACAAATCCT
EW735086       --> ATTATTTTCCATTTATTGGCTTTCATCAGCGGCTGGACAAAACAAATCCT
EX762146       --> ATTATTTTCCATTTATTGGCTTTCATCAGCGGCTGGACAAAACAAATCCT
EX763380       --> ATTATTTTCCATTTATTGGCTTTCATCAGCGGCTGGACAAAACAAATCCT
EX770913       --> ATTATTTTCCATTTATTGGCTTTCATCAGCGGCTGGACAAAACAAATCCT
EX895621       --> ATTATTTTCCATTTATTGGCTTTCATCAGCGGCTGGACAAAACAAATCCT
EY938562       --> ATTATTTTCCATTTATTGGCTTTCATCAGCGGCTGGACAAAACAAATCCT
FD533020       --> ATTATTTTCCATTTATTGGCTTTCATCAGCGGCCGGACAAAACAAATCCT
FD543055       --> ATTATTTTCCATTTATTGGCTTTCATCAGCGGCTGGACAAAACAAATCCT
FD964974       --> ATTATTTTCCATTTATTGGCTTTCATCAGCGGCCGGACAAAACAAATCCT
FD970088       --> ATTATTTTCCATTTATTGGCTTTCATCAGCGGCTGGACAAAACAAATCCT
EX890035       --> ATTATTTTCCATTTATTGGCTTTCATCAGCGGCTGGACAAAACAAATCCT
EY900813       --> ATTATTTTCCATTTATTGGCTTTCATCAGCGGCTGGACAAAACAAATCCT
FD558097       --> ATTATTTTCCATTTATTGGCTTTCATCAGCGTCTGGACAAAACAAATCCT

               101    -    151
UN08384        --> TTTCTGCAGTTTTTGCTTTTGGAGATTCAATACTAGATACTGGTAACAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529327       <-- TTTCTGCAGTTTTTGCTTTCGGAGATTCAATACTAGATACTGGTAACAAT
FD554063       <-- TTTTTGCAGTTTTTGCTTTTGGAGATTCAATACTAGATACTGGTAACAAT
EV541840       <-- ..................................................
EY904674       <-- ..................................................
FD538966       <-- ..................................................
FD966534       <-- ..................................................
EX763899       --> TTTCTGCAGTTTTTGCTTTTGGAGATTCAATACTAGATACTGGTAACAAT
EV566412       --> TTTCTGCAGTTTTTGCTTTTGGAGATTCAATACTAGATACTGGTAACAAT
EW724856       --> TTTCTGCAGTTTTTGCTTTTGGAGATTCAATACTAGATACTGGTAACAAT
EW735086       --> TTTCTGCAGTTTTTGCTTTTGGAGATTCAATACTAGATACTGGTAACAAT
EX762146       --> TTTCTGCAGTTTTTGCTTTTGGAGATTCAATACTAGATACTGGTAACAAT
EX763380       --> TTTCTGCAGTTTTTGCTTTTGGAGATTCAATACTAGATACTGGTAACAAT
EX770913       --> TTTCTGCAGTTTTTGCTTTTGGAGATTCAATACTAGATACTGGTAACAAT
EX895621       --> TTTCTGCAGTTTTTGCTTTTGGAGATTCAATACTAGATACTGGTAACAAT
EY938562       --> TTTCTGCAGTTTTTGCTTTTGGAGATTCAATACTAGATACTGGTAACAAT
FD533020       --> TTTCTGCAGTTTTTGCTTTCGGAGATTCAATACTAGATACTGGTAACAAT
FD543055       --> TTTCTGCAGTTTTTGCTTTTGGAGATTCAATACTAGATACTGGTAACAAT
FD964974       --> TTTCTGCAGTTTTTGCTTTTGGAGATTCAATACTAGATACTGGTAACAAT
FD970088       --> TTTCTGCAGTTTTTGCTTTTGGAGATTCAATACTAGATACTGGTAACAAT
EX890035       --> TTTCTGCAGTTTTTGCTTTTGGAGATTCAATACTAGATACTGGTAACAAT
EY900813       --> TTTCTGCAGTTTTTGCTTTTGGAGATTCAATACTAGATACTGGTAACAAT
FD558097       --> TTTCTGCAGTTTTTGCTTTTGGAGATTCAATACTAGATACTGGTAACAAT

               151    -    201
UN08384        --> AATCGTCTTCTTACTGTATTCAAGGGAAATTACTGGCCATATGGTTGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529327       <-- AATCGTCTTCTTACTGTATTCAAGGGAAATTACTGGCCATATGGTTGGAA  Raphanus raphanistrum subsp. maritimus
FD554063       <-- AATCGTTTTCTTACTCTATTCAAGGGAAATTACTGGCCATATGGTTGGAA  Raphanus raphanistrum subsp. landra
EV541840       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904674       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538966       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966534       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763899       --> AATCGTCTTCTTACTGTATTCAAGGGAAATTACTGGCCATATGGTTGGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566412       --> AATCGTCTTCTTACTCTATTCAAGGGAAATTACTGGCCATATGGTTGGAA  Raphanus raphanistrum subsp. landra
EW724856       --> AATCGTCTTCTTACTGTATTCAAGGGAAATTACTGGCCATATGGTTGGAA  Raphanus sativus cv Early Scarlet Globe
EW735086       --> AATCGTCTTCTTACTGTATTCAAGGGAAATTACTGGCCATATGGTTGGAA  Raphanus sativus cv Rat-Tail Radish #3870
EX762146       --> AATCGTCTTCTTACTGTATTCAAGGGAAATTACTGGCCATATGGTTGGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX763380       --> AATCGTCTTCTTACTGTATTCAAGGGAAATTACTGGCCATATGGTTGGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX770913       --> AATCGTCTTCTTACTCTATTCAAGGGAAATTACTGGCCATATGGTTGGAA  Raphanus raphanistrum subsp. landra
EX895621       --> AATCGTCTTCTTACTGTATTCAAGGGAAATTACTGGCCATATGGTTGGAA  Raphanus sativus cv Early Scarlet Globe
EY938562       --> AATCGTCTTCTTACTGTATTCAAGGGAAATTATTGGCCATATGGTTGGAA  Raphanus sativus cv Early Scarlet Globe
FD533020       --> AATCGTCTTCTTACTGTATTCAAGGGAAATTACTGGCCATATGGTTGGAA  Raphanus raphanistrum subsp. maritimus
FD543055       --> AATCGTCTTCTTACTGTATTCAAGGGAAATTACTGGCCATATGGTTGGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD964974       --> AATCGTCTTCTTACTGTATTCAAGGGAAATTACTGGCCATATGGTTGGAA  Raphanus raphanistrum subsp. maritimus
FD970088       --> AATCGTCTTCTTACTGTATTCAAGGGAAATTACTGGCCATATGGTTGGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX890035       --> AATCGTCTTCTTACTGTATTCAAGGGAAATTACTGGCCATATGGTTGGAA  Raphanus sativus var. oleiformis
EY900813       --> AATCGTCTTCTTACTCTATTCAAGGGAAATTACTGGCCATATGGTTGGAA  Raphanus raphanistrum subsp. maritimus
FD558097       --> AATCGTCTTCTTACTCTATTCAAGGGAAATTACTGGCCATATGGTTGGAA  Raphanus raphanistrum subsp. landra

               201    -    251
UN08384        --> CTATGACTTTAAGATACCGACGGGCAGATTTGGAAATGGGAGAGTTTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529327       <-- CTATGACTTTAAGATACCGACGGGCAGATTTGGAAATGGGAGAGTTTTCA  Raphanus raphanistrum subsp. maritimus
FD554063       <-- CTATGACTTTAAGATACCGACGGGCAGATTTGGAAATGGAAGAGTTTTCA  Raphanus raphanistrum subsp. landra
EV541840       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904674       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538966       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966534       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763899       --> CTATGACTTTAAGATACCGACGGACAGATTTGGAAATGGGAGAGTTTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566412       --> CTATGACTTTAAGATACCGACGGGCAGATTTGGAAATGGAAGAGTTTTCA  Raphanus raphanistrum subsp. landra
EW724856       --> CTATGACTTTAAGATACCGACGGGCAGATTTGGAAATGGGAGAGTTTTCA  Raphanus sativus cv Early Scarlet Globe
EW735086       --> CTATGACTTTAAGATACCGACGGGCAGATTTGGAAATGGGAGAGTTTTCA  Raphanus sativus cv Rat-Tail Radish #3870
EX762146       --> CTATGACTTTAAGATACCGACGGGCAGATTTGGAAATGGGAGAGTTTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX763380       --> CTATGACTTTAAGATACCGACGGGCAGATTTGGAAATGGGAGAGTTTTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX770913       --> CTATGACTTTAAGATACCGACGGGCAGATTTGGAAATGGAAGAGTTTTCA  Raphanus raphanistrum subsp. landra
EX895621       --> CTATGACTTTAAGATACCGACGGGCAGATTTGGAAATGGGAGAGTTTTCA  Raphanus sativus cv Early Scarlet Globe
EY938562       --> CTATGACTTTAAGATACCGACGGGCAGATTTGGAAATGGGAGAGTTTTCA  Raphanus sativus cv Early Scarlet Globe
FD533020       --> CTATGACTTTAAGATACCGACGGGCAGATTTGGAAATGGGAGAGTTTTCA  Raphanus raphanistrum subsp. maritimus
FD543055       --> CTATGACTTTAAGATACCGACGGGCAGATTTGGAAATGGGAGAGTTTTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD964974       --> CTATGACTTTAAGATACCGACGGGCGGATTTGGAAATGGGAGAGTTTTCA  Raphanus raphanistrum subsp. maritimus
FD970088       --> CTATGACTTTAAGATACCGACGGGCAGATTTGGAAATGGGAGAGTTTTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX890035       --> CTATGACTTTAAGATACCGACGGGCAGATTTGGAAATGGGAGAGTTTTCA  Raphanus sativus var. oleiformis
EY900813       --> CTATGACTTTAAGATACCGACGGGCAGATTTGGAAATGGAAGAGTTTTCA  Raphanus raphanistrum subsp. maritimus
FD558097       --> CTATGACTTTAAGATACCGACGGGCAGATTTGGAAATGGAAGAGTTTTCA  Raphanus raphanistrum subsp. landra

               251    -    301
UN08384        --> CCGATATGGTTGCTCAAGGGTTGGGGTTGAAAA-GAGTTGTACCCGCTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529327       <-- CCGATATGGTTGCTCAAGGGTTGGGGTTGAAAA-GAGTTGTACCCGCTTA  Raphanus raphanistrum subsp. maritimus
FD554063       <-- CCGATATGGTTGCTCAAGGGTTGGGGTTGAAAA-GAGTTGTACCCGCTTA  Raphanus raphanistrum subsp. landra
EV541840       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904674       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538966       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966534       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763899       --> CCGATATGGTTGCTCAAGGGTTGGGGTTGAAAA-GAGTTGTACCCGCCTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566412       --> CCGATATGGTTGCTCAAGGGTTGGGGTTGAAAA-GAGTTGTACCCGCTTA  Raphanus raphanistrum subsp. landra
EW724856       --> CCGATATGGTTGCTCAAGGGTTGGGGTTGAAAA-GAGTTGTACCCGCCTA  Raphanus sativus cv Early Scarlet Globe
EW735086       --> CCGATATGGTTGCTCAAGGGTTGGGGTTGAAAA-GAGTTGTACCCGCCTA  Raphanus sativus cv Rat-Tail Radish #3870
EX762146       --> CCGATATGGTTGCTCAAGGGTTGGGGTTGAAAA-GAGTTGTACCCGCCTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX763380       --> CCGATATGGTTGCTCAAGGGTTGGGGTTGAAAA-GAGTTGTACCCGCCTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX770913       --> CCGATATGGTTGCTCAAGGGTTGGGGTTGAAAA-GAGTTGTACCCGCTTA  Raphanus raphanistrum subsp. landra
EX895621       --> CCGATATGGTTGCTCAAGGGTTGGGGTTGAAAA-GAGTTGTACCCGCCTA  Raphanus sativus cv Early Scarlet Globe
EY938562       --> CCGATATGGTTGCTCAAGGGTTGGGGTTGAAAA-GAGTTGTACCCGCCTA  Raphanus sativus cv Early Scarlet Globe
FD533020       --> CCGATATGGTTGCTCAAGGGTTGGGGTTGAAAA-GAGTTGTACCCGCTTA  Raphanus raphanistrum subsp. maritimus
FD543055       --> CCGATATGGTTGCTCAAGGGTTGGGGTTGAAAA-GAGTTGTACCCGCTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD964974       --> CCGATATGGTTGCTCAAGGGTTGGGGTTGAAAAAGAGTTGTACCCGCTTA  Raphanus raphanistrum subsp. maritimus
FD970088       --> CCGATATGGTTGCTCAAGGGTTGGGGTTGAAAA-GAGTTGTACCCGCTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX890035       --> CCGATATGGTTGCTCAAGGGTTGGGGTTGAAAA-GAGTTGTACCCGCCTA  Raphanus sativus var. oleiformis
EY900813       --> CCGATATGGTTGCTCAAGGGTTGGGGTTGAAAA-GAGTTGTACCCGCTTA  Raphanus raphanistrum subsp. maritimus
FD558097       --> CCGATATGGTTGCTCAAGGGTTGGGGTTGAAAA-GAGTTGTACCCGCTTA  Raphanus raphanistrum subsp. landra

               301    -    351
UN08384        --> TCGTAGGATGCGTCGCATCAAGCGCAACGACCTTAAAACTGGCGTTTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529327       <-- TCGTAGGATGCGTCGCATCAAGCGCAACGACCTTAAAACTGGCGTTTGTT
FD554063       <-- TCGTAGGATGCGTCGCATCAAGCGCAACGACCTTAAAACTGGCGTTTGTT
EV541840       <-- ..................................................
EY904674       <-- ..................................................
FD538966       <-- ..................................................
FD966534       <-- ..................................................
EX763899       --> TCGTAGGATGCGTCGCATCAAGCGCAACGACCTTAAAACTGGCGTTTGTT
EV566412       --> TCGTAGGATGCGTCACATCAAGCGCAACGACCTTAAAACTGGCGTTTGTT
EW724856       --> TCGTAGGATGCGTCGCATCAAGCGCAACGACCTTAAAACTGGCGTTTGTT
EW735086       --> TCGTAGGATGCGTCGCATCAAGCGCAACGACCTTAAAACTGGCGTTTGTT
EX762146       --> TCGTAGGATGCGTCGCATCAAGCGCAACGACCTTAAAACTGGCGTTTGTT
EX763380       --> TCGTAGGATGCGTCGCATCAAGCGCAACGACCTTAAAACTGGCGTTTGTT
EX770913       --> TCGTAGGATGCGTCGCATCAAGCGCAACGACCTTAAAACTGGCGTTTGTT
EX895621       --> TCGTAGGATGCGTCGCATCAAGCGCGACGACCTTAAAACTGGCGTTTGTT
EY938562       --> TCGTAGAATGCGTCGCATCAAGCGCAACGACCTTAAAACTGGCGTTTGTT
FD533020       --> TCGTAGGATGCGTCGCATCAAGCGCAACGACCTTAAAACTGGCGTTTGTT
FD543055       --> TCGTAGGATGCGTCGCATCAAGCGCAACGACCTTAAAACTGGCGTTTGTT
FD964974       --> TCGTAGGATGCGTCGCATCAAGCGCAACGACCTTAAAACTGGCGTTTGTT
FD970088       --> TCGTAGGATGCGTCGCATCAAGCGCAACGACCTTAAAACTGGCGTTTGTT
EX890035       --> TCGTAGGATGCGTCGCATCAAGCGCAACGACCTTAAAACTGGCGTTTGTT
EY900813       --> TCGTAGGACGCGTCGCATCAAGCGCAACGACCTTAAAACTGGCGTTTGTT
FD558097       --> TCGTAGGATGCGTCGCATCAAGCGCAACGACCTTAAAACTGGCGTTTGTT

               351    -    401
UN08384        --> TCGCATCAGGTGGTTCAGGAATCGACGATCTTACATCTAGAATACATAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529327       <-- TCGCATCAGGTGGTTCAGGAATCGACGATCTTACATCTAGAATACATAGA
FD554063       <-- TCGCATCAGGTGGTTCAGGAATCGACGATCTTACATCTAGAATACATAGA
EV541840       <-- ..................................................
EY904674       <-- ..................................................
FD538966       <-- ..................................................
FD966534       <-- ..................................................
EX763899       --> TCGCATCAGGTGGTTCAGGAATCGACGATCTTACATCTAGAATACATAGA
EV566412       --> TCGCATCAGGTGGTTCAGGAATCGACGATCTTACATCTAGAATACATAGA
EW724856       --> TCGCATCAGGTGGTTCAGGAATCGACGATCTTACATCTAGAATACATAGA
EW735086       --> TCGCATCAGGTGGTTCAGGAATCGACGATCTTACATCTAGAATACATAGA
EX762146       --> TCGCATCAGGTGGTTCAGGAATCGACGATCTTACATCTAGAATACATAGA
EX763380       --> TCGCATCAGGTGGTTCAGGAATCGACGATCTTACATCTAGAATACATAGA
EX770913       --> TCGCATCAGGTGGTTCAGGAATCGACGATCTTACATCTAGAATACATAGA
EX895621       --> TCGCATCAGGTGGTTCAGGAATCGACGATCTTACATCTAGAATACATAGA
EY938562       --> TCGCATCAGGTGGTTCAGGAATCGACGATCTTACATCTAGAATACATAGA
FD533020       --> TCGCATCAGGTGGTTCAGGAATCGACGATCTTACATCTAGAATACATAGA
FD543055       --> TCGCATCAGGTGGTTCAGGAATCGACGATCTTACATCTAGAATACATAGA
FD964974       --> Tt................................................
FD970088       --> TCGCATCAGGTGGTTCAGGAATCGACGATCTTACATCTAGAATACATAGA
EX890035       --> TCGCATCAGGTGGTTCAGGAATCGACGATCTTACATCTAGAATACATAGA
EY900813       --> TCGCATCAGGTGGTTCAGGAATCGACGATCTTACATCTAGAATACATAGA
FD558097       --> TCGCATCAGGTGGTTCAGGAATCGACGATCTTACATCTAGAATACATAGA

               401    -    451
UN08384        --> GTCTTATCGACAGAGGACCAAGTAAGAGATTTCAAAAAATATTTGAAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529327       <-- GTCTTATCGACAGAGGACCAGGTAAGAGATTTCAAAAAATATTTGAAGCA
FD554063       <-- GTCTTATCGACAGAGGACCAAGTAAGAGATTTCAAAAAATATTTGAAGCA
EV541840       <-- ..................................................
EY904674       <-- ..................................................
FD538966       <-- ..................................................
FD966534       <-- ..................................................
EX763899       --> GTCTTATCGACAGAGGACCAAGTAAGAGATTTCAAAAAATATTTGAAGCA
EV566412       --> GTCTTATCGACAGAGGACCAAGTAAGAGATTCCAAAAAATATTTGAAGCA
EW724856       --> GTCTTATCGACAGAGGACCAAGTAAGAGATTTCAAAAAATATTTGAAGCA
EW735086       --> GTCTTATCGACAGAGGACCAAGTAAGAGATTTCAAAAAATATTTGAAGCA
EX762146       --> GTCTTATCGACAGAGGACCAAGTAAGAGATTCCAAAAAATATTTGAAGCA
EX763380       --> GTCTTAT-GACAGAGGACCAAGTAAGAGATTTCAAAAAATATTTGAAGCA
EX770913       --> GTCTTATCGACAGAGGACCAAGTAAGAGATTTCAAAAAATATTTGAAGCA
EX895621       --> GTCTTATCGACAGAGGACCAAGTAAGAGATTTCAAAAAATATTTGAAGCA
EY938562       --> GTCTTATCGACAGAGGACCAAGTAAGAGATTTCAAAAAATATTTGAAGCA
FD533020       --> GTCTTATCGACAGAGGACCAGGTAAGAGATTTCAAAAAATATTTGAAGCA
FD543055       --> GTCTTATCGACAGAGGACCAAGTAAGAGATTTCAAAAAATATTTGAAGCA
FD964974       --> ..................................................
FD970088       --> GTCTTATCGACAGAGGACCAAGTAAGAGATTTCAAAAAATATTTGAAGCA
EX890035       --> GTCTTATCGACAGAGGACCAAGTAAGAGATTTCAAAAAATATTTGAAGCA
EY900813       --> GTCTTATCGACAGAGGACCAAGTAAGAGATTTCAAAAAATATTTGAAGCA
FD558097       --> GTCTTATCGACAGAGGACCAAGTAAGAGATTTCAAAAAATATTTGAAGCA

               451    -    501
UN08384        --> ACTAAAAAATGCGACGAAAAATAAGAAAGAGATGAAAAATATAATTTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529327       <-- ACT...............................................  Raphanus raphanistrum subsp. maritimus
FD554063       <-- ACTAAAAAATGGGACG..................................  Raphanus raphanistrum subsp. landra
EV541840       <-- ........................................ATAATTTCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904674       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538966       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966534       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763899       --> ACTAAAAAATGCGACGAAAAATAAGAAAGAGATGAAAAATATAATTTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566412       --> ACTAAAAAATGGGACGAAAAATAAGAAAGAGATGAAAAATATAATTTCAA  Raphanus raphanistrum subsp. landra
EW724856       --> ACTAAAAAATGCGACGAAAAATAAGAAAGAGATGAAAAATATAATTTCAA  Raphanus sativus cv Early Scarlet Globe
EW735086       --> ACTAAAAAATGCGACGAAAAATAAGAAAGAGATGAAAAATATAATTTCAA  Raphanus sativus cv Rat-Tail Radish #3870
EX762146       --> ACTAAAAAATGCGACGAAAAATAAGAAAGAGATGAAAAATATAATTTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX763380       --> ACTAAAAAATGCGACGAAAAATAAGAAAGAGATGAAAAATATAATTTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX770913       --> ACTAAAAAATGGGACGAAAAATAAGAAAGAGATGAAAAATATAATTTCAA  Raphanus raphanistrum subsp. landra
EX895621       --> ACTAAAAAATGCGACGAAAAATAAGAAAGAGATGAAAAATATAATTTCAA  Raphanus sativus cv Early Scarlet Globe
EY938562       --> ACTAAAAAATGCGACGAAAAATAAGAAAGAGATGAAAAATATAATTTCAA  Raphanus sativus cv Early Scarlet Globe
FD533020       --> ACT...............................................  Raphanus raphanistrum subsp. maritimus
FD543055       --> ACTAAAAAATGCGACGAAAAATAAGAAAGAGATGAAAAATATAATTTCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD964974       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD970088       --> ACTAAAAAATGCGACGAAAAATAAGAAAGAGATGAAAAATATAATTTCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX890035       --> ACTAAAAAATGCGACGAAAAATAAGAAATAGATGAAAAATATAATTTCAA  Raphanus sativus var. oleiformis
EY900813       --> ACTAAAAAATGGGACGAAAAATAAGAAAGAGATGAAAAATATAATTTCAA  Raphanus raphanistrum subsp. maritimus
FD558097       --> ACTAAAAAATGGGACG..................................  Raphanus raphanistrum subsp. landra

               501    -    551
UN08384        --> ACGCGGTGTTTCTTATTTCTGAAGGAAATAACGATATTGCATACTTCGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529327       <-- ..................................................
FD554063       <-- ..................................................
EV541840       <-- ACGCGGTGTTTCTTATTTCTGAGGGAAACAACGATATTGCATACTTCGTG
EY904674       <-- ..................................................
FD538966       <-- ..................................................
FD966534       <-- ..................................................
EX763899       --> ACGCGGTGTTTCTTATTTCTGAAGGAAATAACGATATTGCATACTTCGTG
EV566412       --> ACGCGGTGTTTCTTATTTCTGAAGGAAATAACGATATTGCATACTTCGTG
EW724856       --> ACGCGGTGTTTCTTATTTCTGAAGGAAATAACGATATTGCATACTTCGTG
EW735086       --> ACGCGGTGTTTCTTATTTCTGAAGGAAATAACGATATTGCATACTTCGTG
EX762146       --> ACGCGGTGTTTCTTATTTCTGAAGGAAATAACGATATTGCATACTTCGTG
EX763380       --> ACGCGGTGTTTCTTATTTCTGAAGGAAATAACGATATTGCATACTTCGTG
EX770913       --> ACGCGGTGTTTCTTATTTCTGAAGGAAATAACGATATTGCATACTTCGTG
EX895621       --> ACGCGGTGTTTCTTATTTCTGAAGGAAATAACGATATTGCATACTTCGTG
EY938562       --> ACGCGGTGTTTCTTATTTCTGAAGGAAATAACGATATTGCATACTTCGTG
FD533020       --> ..................................................
FD543055       --> ACGCGGTGTTTCTTATTTCTGAAGGAAACAACGATATTGCATACTTCGTG
FD964974       --> ..................................................
FD970088       --> ACGCGGTGTTTCTTATTTCTGAAGGAAACAACGATATTGCATACTTCGTG
EX890035       --> ACGCGGTGTTTCTTATTTCTGAAGGAAATAACGATATTGCATACTTCGTG
EY900813       --> ACGCGGTGTTTCTTATTTCTGAAGGAAATAACGATATTGCATACTTCGTG
FD558097       --> ..................................................

               551    -    601
UN08384        --> ACTCCCGCTCGTCTACGATTACAATCCAAAGATACATACACAAGTAACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529327       <-- ..................................................
FD554063       <-- ..................................................
EV541840       <-- ACTCCCGCTCGTCTACGATTACAATCCAAAGATACATACACAAGTAACAT
EY904674       <-- ..................................................
FD538966       <-- ..................................................
FD966534       <-- ..................................................
EX763899       --> ACTCCCGCTCGTCTACGATTACAATCCAAAGATACATACACAAGTAACAT
EV566412       --> ACTCCCGCTCGTCTACGATTACAATCCAAAGATACATACACAAGTAACAT
EW724856       --> ACTCCCGCTCGTCTACGATTACAATCCAAAGATACATACACAAGTAACAT
EW735086       --> ACTCCCGCTCGTCTACGATTACAATCCAAAGATACATACACAAGTAACAT
EX762146       --> ACTCCCGCTCGTCTACGATTACAATCCAAAGATACATACACAAGTAACAT
EX763380       --> ACTCCCGCTCGTCTACGATTACAATCCAAAGATACATACACAAGTAACAT
EX770913       --> ACTCCCGCTCGTCTACGATTACAATCCAAAGATACATACACAAGTAACAT
EX895621       --> ACTCCCGCTCGTCTACGATTACAATCCAAAGATACATACACAAGTAACAT
EY938562       --> ACTCCCGCTCGTCTACGATTACAATCCAAAGATACATACACAAGTAACAT
FD533020       --> ..................................................
FD543055       --> ACTCCCGCTCGTCTACGATTACAATCCAAAGATACATACACAAGTAACAT
FD964974       --> ..................................................
FD970088       --> ACTCCCGCTCGTCTACGATTACAATCCAAAGATACATACACAAGTAACAT
EX890035       --> ACTCCCGCTCGTCTACGATTACAATCCAAAGATACATACACAAGTAACAT
EY900813       --> ACTCCCGCTCGTCTACGATTACAATCCAAAGATACATACACAGGTAACAT
FD558097       --> ..................................................

               601    -    651
UN08384        --> GGTTTTTTGGACAAAAACATTCCTACAAGATTTATACGATCTTGGAGCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529327       <-- ..................................................
FD554063       <-- ..................................................
EV541840       <-- GGTTTTTTGGACAAAAACATTCCTACAAGATTTATACGATCTTGGAGCGA
EY904674       <-- ..........ACAAAAACATTCCTACAAGATTTATACGATCTTGGAGCGA
FD538966       <-- ..................................................
FD966534       <-- ..................................................
EX763899       --> GGTTTTTTGGACAAAAACATTCCTACAAGATTTATACGATCTTGGAGCGA
EV566412       --> GGTTTTTTGGACAAAAACATTCCTACAAGATTTATACGATCTTGGAGCGA
EW724856       --> GGTTTTTTGGACAAAAACATTCCTACAAGATTTATACGATCTTGGAGCGA
EW735086       --> GGTTTTTTGGACAAAA-CATTCCTACA-GATTTATACGATCTTGGAGCGA
EX762146       --> GGTTTTTTGGACAAAAACATTCCTACAAGATTTATACGATCTTGGAGCGA
EX763380       --> GGTTTTTTGGACAAAAACATTCCTACAAGATTTATACGATCTTGGAGCGA
EX770913       --> GGTTTTTTGGACAAAAACATTCCTACAAGATTTATACGATCTTGGAGCGA
EX895621       --> GGTTTTTTGGACAAAA-CATTCCTACAAGATTTATACGATCTTGGAGCGA
EY938562       --> GGTTTTTTGGACAAAAACATTCCTACAAGATTTATACGATCTTGGAGCGA
FD533020       --> ..................................................
FD543055       --> GGTTTTTTGGACAAAAACATTCCTACAAGATTTATACGATCTTGGAGCGA
FD964974       --> ..................................................
FD970088       --> GGTTTTTTGGACAAAAACATTCCTACAAGATTTATACGATCTTGGAGCGA
EX890035       --> GGTTTTTTGGACAAAAACATTCCTACAAGATTTATACGATCTTGGAGCGA
EY900813       --> GGTTTTTTGGACAAAAACATTCCTACAAGATTTATACGATCTTGGAGCGA
FD558097       --> ..................................................

               651    -    701
UN08384        --> GAAAATTCGCGGTGATGGGAGCGATTCCGGTAG-ATGCTTGCCTTTCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529327       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD554063       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV541840       <-- GAAAATTCGCGGTGATGGGAGCGATTCCGGTAGGATGCTTGCCTTTCCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904674       <-- GAAAATTCGCGGTGATGGGAGCGATTCCGGTAGGATGCTTGCCTTTCCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538966       <-- .........CGGTGACGGGAGCGATTCCGGTAGGATGCTTGTCTTTCCAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966534       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763899       --> GAAAATTCGCGGTGATGGGAGCGATT........................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566412       --> GAAAATTCGCGGCGATGGGAGCGATTCCGGTAGGATGCTTGTCTTTCCAT  Raphanus raphanistrum subsp. landra
EW724856       --> GAAAATTCGCGGTGATGGGAGCGATTCCCGTAG-ATGCTTGCCTTTCCAT  Raphanus sativus cv Early Scarlet Globe
EW735086       --> GAAAAT-CGCGGTGATGGGAGCGATCCCG-TAG-ATGCTT..........  Raphanus sativus cv Rat-Tail Radish #3870
EX762146       --> GAAAATTCGCGGTGATGGGAGCGATTCCCGTAG-ATGCTTGCCTTTCCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX763380       --> GAAAATTCGCGGTGATGGGAGCGATTCCCGTAG-ATGCTTGCCTTTCCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX770913       --> GAAAATTCGCGGTGATGGGAG.............................  Raphanus raphanistrum subsp. landra
EX895621       --> GAAAATTCGCGGTGATGGGAGCGATTCCCGTAG-ATGCTTGCCTTTCCAT  Raphanus sativus cv Early Scarlet Globe
EY938562       --> GAAAATTCGCGGTGATGGGAGCGATTCCCGTAG-ATGCTTGCCTTTCCAT  Raphanus sativus cv Early Scarlet Globe
FD533020       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD543055       --> GA................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD964974       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD970088       --> GAAAATTCGCGGTGATGGGAGCGATTCCcgt...................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX890035       --> GAAAATTCGCGGTGATTGGAGCGATTCCc.....................  Raphanus sativus var. oleiformis
EY900813       --> GAAAATTCGCGGTGATGGGAGCGATTCCGTAGG-ATGCTTGCCTTTCCAT  Raphanus raphanistrum subsp. maritimus
FD558097       --> ..................................................  Raphanus raphanistrum subsp. landra

               701    -    751
UN08384        --> CGCTTCATATTTGGTGGAGTATTTGCATGGTGTAACTTCATGATGAATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529327       <-- ..................................................
FD554063       <-- ..................................................
EV541840       <-- CGCTTCATATTTGGTGGAGTATTTGCATGGTGTAACTTCATGATGAATAA
EY904674       <-- CGCTTCATATTTGGTGGAGTATTTGCATGGTGTAACTTCATGATGAATAA
FD538966       <-- CGCTTCATATTTGGTGGAGTATTTGCATGGTGTAACTTCATGATGAATAA
FD966534       <-- .................................AACTTCATGATGAATAA
EX763899       --> ..................................................
EV566412       --> CGCTTCATATTTGGTGGAGTATTTGCATGGTGTAACTTCATGATGAATAA
EW724856       --> CGCTTCATATTTGGTGGAGTATTTGCATGGTGTA-CTTCATGATGA-T-A
EW735086       --> ..................................................
EX762146       --> CGCTTCATATTTGGTGGAGTATTTGCATGGTGTA-CTTCATGATGAA-AA
EX763380       --> CGCTTCATATTTGGTGGAGTATT-GCATGGTGTA-CTTCATGATGA-T-A
EX770913       --> ..................................................
EX895621       --> CGCTTCATATTTGGTGGAGTATTTGCATGG....................
EY938562       --> CGCTTCATATTTGGTGGAGTATTTGCATGGTGTAACTTCATGATGAATAA
FD533020       --> ..................................................
FD543055       --> ..................................................
FD964974       --> ..................................................
FD970088       --> ..................................................
EX890035       --> ..................................................
EY900813       --> CGCTTCATATTTGGTGGAGTATTTGCATGGTGTAACTTCA..........
FD558097       --> ..................................................

               751    -    801
UN08384        --> AATTTCGGAAGACTTCAACACAAAATTGCGGAAAGCTCTTATTGGTTACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529327       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD554063       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV541840       <-- AATTTCGGAAGACTTCAACACAAAATTGCGGAAAGCTCTTATTGGTTACG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904674       <-- AATTTCGGAAGACTTCAACACAAAATTGCGGAAAGCTCTTATTGGTTACG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD538966       <-- AATTTCGGAAGACTTCAACACAAAATTGCGGAAAGCTCTTATTGGTTACG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD966534       <-- AATTTCGGAAGACTTCAACACAAAATTGCGGAAAGCTCTTATTGGTTACG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX763899       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566412       --> AATTTCGGAAGACTTCAACACAAAATTGCGGAAAGCTCTTATTGGTTACG  Raphanus raphanistrum subsp. landra
EW724856       --> AATTTCGGA-GACTTCA-CACAAA-TTGCG-AAAGCTCTTATTGGTacga  Raphanus sativus cv Early Scarlet Globe
EW735086       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EX762146       --> AATTTCGGA-GACTTCA-CACAAA-TTGCG-AAAGCTC............  Raphanus raphanistrum subsp. raphanistrum (NY)
EX763380       --> AATTTCGGA-GACTTCAGCACAAA-TTGCGGAAgctc.............  Raphanus raphanistrum subsp. raphanistrum (NY)
EX770913       --> ..................................................  Raphanus raphanistrum subsp. landra
EX895621       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EY938562       --> A-TTTCGGA-GACTTCAACACAAA-TTGCG-AAAGCTCTTATTGGTTACG  Raphanus sativus cv Early Scarlet Globe
FD533020       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD543055       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD964974       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD970088       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX890035       --> ..................................................  Raphanus sativus var. oleiformis
EY900813       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD558097       --> ..................................................  Raphanus raphanistrum subsp. landra

               801    -    851
UN08384        --> AAGTAGAAGAATGTTTTAAAGGTGCAAAGTTTGTTTACGTCGACATGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529327       <-- ..................................................
FD554063       <-- ..................................................
EV541840       <-- AAGTAGAAGAATGTTTTAAAGGTGCAAAGTTTGTTTACGTCGACATGTAC
EY904674       <-- AAGTAGAAGAATGTTTTAAAGGTGCAAAGTTTGTTTACGTCGACATGTAC
FD538966       <-- AAGTAGAAGAATGTTTTAAAGGTGCAAAGTTTGTTTACGTCGACATGTAC
FD966534       <-- AAGTAGAAGAATGTTTTAAAGGTGCAAAGTTTGTTTACGTCGACATGTAC
EX763899       --> ..................................................
EV566412       --> AAGTAGAAGA-TGTTTT.................................
EW724856       --> g.................................................
EW735086       --> ..................................................
EX762146       --> ..................................................
EX763380       --> ..................................................
EX770913       --> ..................................................
EX895621       --> ..................................................
EY938562       --> A-GTAGAtatgttta...................................
FD533020       --> ..................................................
FD543055       --> ..................................................
FD964974       --> ..................................................
FD970088       --> ..................................................
EX890035       --> ..................................................
EY900813       --> ..................................................
FD558097       --> ..................................................

               851    -    901
UN08384        --> GGCTCTATTATGAATCTTATCAACCATCCTAAGGCCTTTGGGTTTGCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529327       <-- ..................................................
FD554063       <-- ..................................................
EV541840       <-- GGCTCTATTATGAATCTTATCAACCATCCTAAGGCCTTTGGGTTTGCAGA
EY904674       <-- GGCTCTATTATGAATCTTATCAACCATCCTAAGGCCTATGGGTTTGCAGA
FD538966       <-- GGCTTTATTATGAATCTTATCAACCATCCTAAGGCCTTTGGGTTTGCAGA
FD966534       <-- GGCTCTATTATGAATCTTATCAACCATCCTAAGGCCTTTGGGTTTGCAGA
EX763899       --> ..................................................
EV566412       --> ..................................................
EW724856       --> ..................................................
EW735086       --> ..................................................
EX762146       --> ..................................................
EX763380       --> ..................................................
EX770913       --> ..................................................
EX895621       --> ..................................................
EY938562       --> ..................................................
FD533020       --> ..................................................
FD543055       --> ..................................................
FD964974       --> ..................................................
FD970088       --> ..................................................
EX890035       --> ..................................................
EY900813       --> ..................................................
FD558097       --> ..................................................

               901    -    951
UN08384        --> AGCGAAAAGATCGTGTTGTTGTATGGTGACATCGATAATACCATGCCGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529327       <-- ..................................................
FD554063       <-- ..................................................
EV541840       <-- AGCGAAAAGATCGTGTTGTTGTATGGTGACATCGATAATACCATGCCGAA
EY904674       <-- AGCGAAAAGATCGTGTTGTTGTATGGTGACATCGATAATACCATGCCGAA
FD538966       <-- AGCGAAAAGATCGTGTTGTTGTATGGTGACATCGATAATACCATGCCGAA
FD966534       <-- GGCGAAAAGATCGTGTTGTTGTATGGTGACATCGATAATACCATGCCGAA
EX763899       --> ..................................................
EV566412       --> ..................................................
EW724856       --> ..................................................
EW735086       --> ..................................................
EX762146       --> ..................................................
EX763380       --> ..................................................
EX770913       --> ..................................................
EX895621       --> ..................................................
EY938562       --> ..................................................
FD533020       --> ..................................................
FD543055       --> ..................................................
FD964974       --> ..................................................
FD970088       --> ..................................................
EX890035       --> ..................................................
EY900813       --> ..................................................
FD558097       --> ..................................................

               951    -   1001
UN08384        --> ACCCAGATGAGTACGTATTCTATGACTTCGCTCACCCCACCATGAGAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529327       <-- ..................................................
FD554063       <-- ..................................................
EV541840       <-- ACCCAGATGAGTACGTATTCTATGACTTCGCTCACCCCACCATGAGAGCC
EY904674       <-- ACCCAGATGAGTACGTATTCTATGACTTCGCTCACCCCACCATGAGAGCC
FD538966       <-- ACCCAGATGAGTACGTATTCTATGACTTCGCTCACCCCACCATGAGAGCC
FD966534       <-- ACCCAGATGAGTACGTATTCTATGACTTCGCTCACCCCACCATGAGAGCC
EX763899       --> ..................................................
EV566412       --> ..................................................
EW724856       --> ..................................................
EW735086       --> ..................................................
EX762146       --> ..................................................
EX763380       --> ..................................................
EX770913       --> ..................................................
EX895621       --> ..................................................
EY938562       --> ..................................................
FD533020       --> ..................................................
FD543055       --> ..................................................
FD964974       --> ..................................................
FD970088       --> ..................................................
EX890035       --> ..................................................
EY900813       --> ..................................................
FD558097       --> ..................................................

               1001   -   1051
UN08384        --> TATGAAGTAATATCTAAACCTCTTATCTATCAGATGAGGAAAGGCCTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529327       <-- ..................................................
FD554063       <-- ..................................................
EV541840       <-- TATGAAGTAATATCTAAACCTCTTATCTATCAGATGAGGAAAGGCCTTGC
EY904674       <-- TATGAAGTAATATCTAAACCTCTTATCTATCAGATGAGGAAAGGCCTTGC
FD538966       <-- CATGAAGTAATATCTAAACCTCTTATCTATCAGATGAGGAAAGGCCTTGC
FD966534       <-- TATGAAGTAATATCTAAACCTCTTATCTATCAGATGAGGAAAGGCCTTGC
EX763899       --> ..................................................
EV566412       --> ..................................................
EW724856       --> ..................................................
EW735086       --> ..................................................
EX762146       --> ..................................................
EX763380       --> ..................................................
EX770913       --> ..................................................
EX895621       --> ..................................................
EY938562       --> ..................................................
FD533020       --> ..................................................
FD543055       --> ..................................................
FD964974       --> ..................................................
FD970088       --> ..................................................
EX890035       --> ..................................................
EY900813       --> ..................................................
FD558097       --> ..................................................

               1051   -   1101
UN08384        --> ATGATTTAGTTTCTTGTTTCTTACCATGTTTAATTTTAATATTCATGTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529327       <-- ..................................................
FD554063       <-- ..................................................
EV541840       <-- ATGATTTAGTTTCTTGTTTCTTACCATGTTTAATTTTAATATTCATGTTA
EY904674       <-- ATGATTTAGTTTCTTGTTTCTTACCATGTTTAATTTTAATATTCATGTTA
FD538966       <-- ATGATTTAGTTTCTTGTTTCTTACCATGTTTAATTTTAATATTCATGTTA
FD966534       <-- ATGATTTAGTTTCTTGTTTCTTACCATGTTTAATTTTAATATTCATGTTA
EX763899       --> ..................................................
EV566412       --> ..................................................
EW724856       --> ..................................................
EW735086       --> ..................................................
EX762146       --> ..................................................
EX763380       --> ..................................................
EX770913       --> ..................................................
EX895621       --> ..................................................
EY938562       --> ..................................................
FD533020       --> ..................................................
FD543055       --> ..................................................
FD964974       --> ..................................................
FD970088       --> ..................................................
EX890035       --> ..................................................
EY900813       --> ..................................................
FD558097       --> ..................................................

               1101   -   1151
UN08384        --> CAGGCGACAATATCATACATGACGATATATATTCTTAGTGTAAAGAATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529327       <-- ..................................................
FD554063       <-- ..................................................
EV541840       <-- CAGGCGACAATATCATACATGACGATATATATTCTTAGTGTAAAGAATGT
EY904674       <-- CAGGCGACAATATCATACATGACGATATATATTCTTAGTGTAAAGAATGT
FD538966       <-- CAGGCGACAATATCATACATGACGATATATATTCTTAGTGTAAAGAATGT
FD966534       <-- CAGGCGACAATATCATACATGACGATATATATTCTTAGTGTAAAGAATGT
EX763899       --> ..................................................
EV566412       --> ..................................................
EW724856       --> ..................................................
EW735086       --> ..................................................
EX762146       --> ..................................................
EX763380       --> ..................................................
EX770913       --> ..................................................
EX895621       --> ..................................................
EY938562       --> ..................................................
FD533020       --> ..................................................
FD543055       --> ..................................................
FD964974       --> ..................................................
FD970088       --> ..................................................
EX890035       --> ..................................................
EY900813       --> ..................................................
FD558097       --> ..................................................

               1151   -   1201
UN08384        --> ATGATCCAATGATGTATAATTGTATTGTGCTTTCTTTTATAATGTCACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529327       <-- ..................................................
FD554063       <-- ..................................................
EV541840       <-- ATGATCCAATGATGTATAATTGTATTGTGCTTTCTTTTATAATGTCACAG
EY904674       <-- ATGATCCAATGATGTATAATTGTATTGTGCTTTCTTTTATAATGTCACAG
FD538966       <-- ATGATCCAATGATGTATAATTGTATTGTGCTTTCTTTTATAATGTCACAG
FD966534       <-- ATGATCCAATGATGTATAATTGTATTGTGCTTTCTTTTATAATGTCACAG
EX763899       --> ..................................................
EV566412       --> ..................................................
EW724856       --> ..................................................
EW735086       --> ..................................................
EX762146       --> ..................................................
EX763380       --> ..................................................
EX770913       --> ..................................................
EX895621       --> ..................................................
EY938562       --> ..................................................
FD533020       --> ..................................................
FD543055       --> ..................................................
FD964974       --> ..................................................
FD970088       --> ..................................................
EX890035       --> ..................................................
EY900813       --> ..................................................
FD558097       --> ..................................................

               1201   -   1251
UN08384        --> ACAAACGCGTTTGTCAATAAATTCATGTATATTAACGGAAATAACACAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529327       <-- ..................................................
FD554063       <-- ..................................................
EV541840       <-- ACAAACGCGTTTGTCAATAAATTCATGTATATTAACGGAAATAACACAAA
EY904674       <-- ACAAACGCGTTTGTCAATAAATTCATGTATATTAACGG............
FD538966       <-- ACAAACGCGTTTGTC...................................
FD966534       <-- ACAAACGCGTTTGTCAATAAATTCATGTATATTAACGGAAATAACACAAA
EX763899       --> ..................................................
EV566412       --> ..................................................
EW724856       --> ..................................................
EW735086       --> ..................................................
EX762146       --> ..................................................
EX763380       --> ..................................................
EX770913       --> ..................................................
EX895621       --> ..................................................
EY938562       --> ..................................................
FD533020       --> ..................................................
FD543055       --> ..................................................
FD964974       --> ..................................................
FD970088       --> ..................................................
EX890035       --> ..................................................
EY900813       --> ..................................................
FD558097       --> ..................................................

               1251   -   1301
UN08384        --> AGAGGGCTTATAAAAGAAATTGTAGAACCTGTCTACTGACCACACAAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529327       <-- ..................................................
FD554063       <-- ..................................................
EV541840       <-- AGAGGGCTTATAAAAGAAATTGTAGAACCTGTCTACTGACCACACAAAAG
EY904674       <-- ..................................................
FD538966       <-- ..................................................
FD966534       <-- AGAGGGCTTAT.......................................
EX763899       --> ..................................................
EV566412       --> ..................................................
EW724856       --> ..................................................
EW735086       --> ..................................................
EX762146       --> ..................................................
EX763380       --> ..................................................
EX770913       --> ..................................................
EX895621       --> ..................................................
EY938562       --> ..................................................
FD533020       --> ..................................................
FD543055       --> ..................................................
FD964974       --> ..................................................
FD970088       --> ..................................................
EX890035       --> ..................................................
EY900813       --> ..................................................
FD558097       --> ..................................................

               1301   -   1351
UN08384        --> ATGATTCCTTAATAACACGAGAATCATCTGAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD529327       <-- ..................................
FD554063       <-- ..................................
EV541840       <-- ATGATTCCTTAATAACACGAGAATCATCTGAAAC
EY904674       <-- ..................................
FD538966       <-- ..................................
FD966534       <-- ..................................
EX763899       --> ..................................
EV566412       --> ..................................
EW724856       --> ..................................
EW735086       --> ..................................
EX762146       --> ..................................
EX763380       --> ..................................
EX770913       --> ..................................
EX895621       --> ..................................
EY938562       --> ..................................
FD533020       --> ..................................
FD543055       --> ..................................
FD964974       --> ..................................
FD970088       --> ..................................
EX890035       --> ..................................
EY900813       --> ..................................
FD558097       --> ..................................