Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN08421

               1      -     51
UN08421        --> GCAACTTTCATTCGGTTCTGTGTTTTCATTTCAGTTAAAAAAAACTTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989663       <-- ..................................................
EW722182       <-- ..................................................
EW722183       <-- ..................................................
FD557438       <-- ..................................................
EW729153       --> GCAACTTTCATTCGGTTCTGTGTTTTCATTTCAGTTAAAAAAAACTTGTT
FD985418       --> ..................................................
EW726981       --> ..................................................
EW727274       --> ..................................................

               51     -    101
UN08421        --> GTTTGGTTTGTTCTGTTTGCATATGATCTTCAAAATTCAAGAGCTTTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989663       <-- ...........TCTGTTTGCATATGATCTTCAAAATTCAAGAGCTTTGTT
EW722182       <-- .................gGCATATGATCTTCAAAATTCAAGAGCTTTGTT
EW722183       <-- .................gGCATATGATCTTCAAAATTCAAGAGCTTTGTT
FD557438       <-- ..................................................
EW729153       --> GTTTGGTTTGTTCTGTTTGCATATGATCTTCAAAATTCAAGAGCTTTGTT
FD985418       --> .........gcTCTGTTTGCATATGATCTTCAAAATTCAAGAGCTTTGTT
EW726981       --> .................gGCATATGATCTTCAAAATTCAAGAGCTTTGTT
EW727274       --> .................gGCATATGATCTTCAAAATTCAAGAGCTTTGTT

               101    -    151
UN08421        --> ATAAAAACATCTGATGAATGAAACTGAGATAAAAACTAATATATAGATAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989663       <-- ATAAAAACATCTGATGAATGAAACTGAGATAAAAACTAATATATAGATAG
EW722182       <-- ATAAAAACATCTGATGAATGAAACTGAGATAAAAACTAATATATAGATAG
EW722183       <-- ATAAAAACATCTGATGAATGAAACTGAGATAAAAACTAATATATAGATAG
FD557438       <-- ..................................................
EW729153       --> ATAAAAACATCTGATGAATGAAACTGAGATAAAAACTAATATATAGATAG
FD985418       --> ATAAAAACATCTGATGAATGAAACTGAGATAAAAACTAATATATAGATAG
EW726981       --> ATAAAAACATCTGATGAATGAAACTGAGATAAAAACTAATATATAGATAG
EW727274       --> ATAAAAACATCTGATGAATGAAACTGAGATAAAAACTAATATATAGATAG

               151    -    201
UN08421        --> AATGATATTTCGAACATTAGGAGTAGGGGATTGATTGACTACGAAGTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989663       <-- AATGATATTTCGAACATTAGGAGTAGGGGATTGATTGACTACGAAGTCTT
EW722182       <-- AATGATATTTCGAACATTAGGAGTAGGGGATTGATTGACTACGAAGTCTT
EW722183       <-- AATGATATTTCGAACATTAGGAGTAGGGGATTGATTGACTACGAAGTCTT
FD557438       <-- ..................................................
EW729153       --> AATGATATTTCGAACATTAGGAGTAGGGGATTGATTGACTACGAAGTCTT
FD985418       --> AATGATATTTCGAACATTAGGAGTAGGGGATTGATTGACTACCAAGTCTT
EW726981       --> AATGATATTTCGAACATTAGGAGTAGGGGATTGATTGACTACGAAGTCTT
EW727274       --> AATGATATTTCGAACATTAGGAGTAGGGGATTGATTGACTACGAAGTCTT

               201    -    251
UN08421        --> GTTTTTGCCGTATATATCTTCAAAACCATCAGCTACTCTTTTCCTTCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989663       <-- GTTTTTGCCGTATATATCTTCAAAACCATCAGCTACTCTTTTCCTTCTTT
EW722182       <-- GTTTTTGCCGTATATATCTTCAAAACCATCAGCTACTCTTTTCCTTCTTT
EW722183       <-- GTTTTTGCCGTATATATCTTCAAAACCATCAGCTACTCTTTTCCTTCTTT
FD557438       <-- ..................................................
EW729153       --> GTTTTTGCCGTATATATCTTCAAAACCATCAGCTACTCTTTTCCTTCTTT
FD985418       --> GTTTTTGCCGTATATATCTTCAAAACCATCAGCTACTCTTTTCCTTCTTT
EW726981       --> GTTTTTGCCGTATATATCTTCAAAACCATCAGCTACTCTTTTCCTTCTTT
EW727274       --> GTTTTTGCCGTATATATCTTCAAAACCATCAGCTACTCTTTTCCTTCTTT

               251    -    301
UN08421        --> CAGCAATCATTTCTGAGTAAGACTTTGGGTAGCTGTAAAGGAAAATGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989663       <-- CAGCAATCATTTCTGAGCAAGCCTTTGGGTAGCTATAAAGGAAAATGTAC
EW722182       <-- CAGCAATCATTTCTGAGTAAGACTTTGGGTAGCTGTAAAGGAAAATGTAC
EW722183       <-- CAGCAATCATTTCTGAGTAAGACTTTGGGTAGCTGTAAAGGAAAATGTAC
FD557438       <-- ..................................................
EW729153       --> CAGCAATCATTTCTGAGTAAGACTTTGGGTAGCTGTAAAGGAAAATGTAC
FD985418       --> CAGCAATCATTTCTGAACAAGCCTTTGGGTAGCTATAAAGGAAAATGTAC
EW726981       --> CAGCAATCATTTCTGAGTAAGACTTTGGGTAGCTGTAAAGGAAAATGTAC
EW727274       --> CAGCAATCATTTCTGAGTAAGACTTTGGGTAGCTGTAAAGGAAAATGTAC

               301    -    351
UN08421        --> CACCACGCGCCAATTAAACCAACGGCAAGCGATGAAACTAAAACCGAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989663       <-- CACCACGCACCAATTAAACCAACGGCAAGCGATGAAACTAAAACCGAATG
EW722182       <-- CACCACGCGCCAATTAAACCAACGGCAAGCGATGAAACTAAAACCGAATG
EW722183       <-- CACCACGCGCCAATTAAACCAACGGCAAGCGATGAAACTAAAACCGAATG
FD557438       <-- ..................................................
EW729153       --> CACCACGCGCCAATTAAACCAACGGCAAGCGATGAAACTAAAACCGAATG
FD985418       --> CACCACGCACCAATTAAACCAACGGCAAGCGATGAAACTAAAACCGAATG
EW726981       --> CACCACGCGCCAATTAAACCAACGGCAAGCGATGAAACTAAAACCGAATG
EW727274       --> CACCACGCGCCAATTAAACCAACGGCAAGCGATGAAACTAAAACCGAATG

               351    -    401
UN08421        --> TAGTATTGCCCAGCTACAAGCCACTATTGACAAACCCGTCACCACTATCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989663       <-- TAGTATTGCCCAGCTACAAGCCACTATTGACAAACCCGTCACCACTATCG
EW722182       <-- TAGTATTGCCCAGCTACAAGCCACTATTGACAAACCCGTCACCACTATCG
EW722183       <-- TAGTATTGCCCAGCTACAAGCCACTATTGACAAACCCGTCACCACTATCG
FD557438       <-- ...............ACAAGCCACTATTGACAAACCCGTCACCACTATCG
EW729153       --> TAGTATTGCCCAGCTACAAGCCACTATTGACAAACCCGTCACCACTATCG
FD985418       --> TAGTATTGCCCAGCTACAAGCCACTATTGACAAACCCGTCACCACTATCG
EW726981       --> TAGTATTGCCCAGCTACAAGCCACTATTGACAAACCCGTCACCACTATCG
EW727274       --> TAGTATTGCCCAGCTACAAGCCACTATTGACAAACCCGTCACCACTATCG

               401    -    451
UN08421        --> TCCATGGTTGACACCAGGAGGGCTTTGTATCCCATACAGAGTCGTATTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989663       <-- TCCATGGTTGACACCAGGAGGGCTTTGTATCCCATACAGAGTCGTATTCG
EW722182       <-- TCCATGGTTGACACCAGGAGGGCTTTGTATCCCATACAGAGTCGTATTCG
EW722183       <-- TCCATGGTTGACACCAGGAGGGCTTTGTATCCCATACAGAGTCGTATTCG
FD557438       <-- TCCATGGTTGACACCAGGAGGGCTTTGTATTCCATACGGAGTCGTATTCG
EW729153       --> TCCATGGTTGACACCAGGAGGGCTTTGTATCCCATACAGAGTCGTATTCG
FD985418       --> TCCATGGTTGACACCAGGAGGGCTTTGTATCCCATACAGAGTCGTATTCC
EW726981       --> TCCATGGTTGACACCAGGAGGGCTTTGTATCCCATACAGAGTCGTATTCG
EW727274       --> TCCATGGTTGACACCAGGAGGGCTTTGTATCCCATACAGAGTCGTATTCG

               451    -    501
UN08421        --> AGAGAGAGATGATCCAAGTAACCTTCCATGTCGCCATTTTCATCGACGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989663       <-- AGAGGGAGATGATCCAAGTAACCTTCCATGTCGCCATTTTCATCGACGAA
EW722182       <-- AGAGAGAGATGATCCAAGTAACCTTCCATGTCGCCATTTTCATCGACGAA
EW722183       <-- AGAGAGAGATGATCCAAGTAACCTTCCATGTCGCCATTTTCATCGACGAA
FD557438       <-- AGAGAGAGATGATTCAAGTAACCTTCCATGTCGTCATTTTCATCGACGAA
EW729153       --> AGAGAGAGATGATCCAAGTAACCTTCCATGTCGCCATTTTCATCGACGAA
FD985418       --> AGAGGGAGATGATCCAAGTAACCTTCCATGTCGCCATTTTCATCGACGAA
EW726981       --> AGAGAGAGATGATCCAAGTAACCTTCCATGTCGCCATTTTCATCGACGAA
EW727274       --> AGAGAGAGATGATCCAAGTAACCTTCCATGTCGCCATTTTCATCGACGAA

               501    -    551
UN08421        --> TCTCGAATCATTCTGCTCTCTTCGATTTCCTCCCAGACCTCTAACTTTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989663       <-- TCTCGAATCATTCTGCTCTCTTCGATTTCCTCCCAAACCTCCAACTTTCG  Raphanus raphanistrum subsp. landra
EW722182       <-- TCTCGAATCATTCTGCTCTCTTCGATTTCCTCCCAGACCTCTAACTTTCG  Raphanus sativus cv Early Scarlet Globe
EW722183       <-- TCTCGAATCATTCTGCTCTCTTCGATTTCCTCCCAGACCTCTAACTTTCG  Raphanus sativus cv Early Scarlet Globe
FD557438       <-- TCTCGAATCATTCTGCTCTCTTCGATTTCCTCCCAAACCTCCAACTTTCG  Raphanus raphanistrum subsp. landra
EW729153       --> TCTCGAATCATTCTGCTCTCTTCGATTTCCTCCCAGACCTCTAACTTTCG  Raphanus sativus cv Early Scarlet Globe
FD985418       --> TCTCGAATCATTCTGCTCTCTTCGATTTCCTCCCAAACCTCCAACTTTCG  Raphanus raphanistrum subsp. landra
EW726981       --> TCTCGAATCATTCTGCTCTCTTCGATTTCCTCCCAGACCTCTAACTTTCG  Raphanus sativus cv Early Scarlet Globe
EW727274       --> TCTCGAATCATTCTGCTCTCTTCGATTTCCTCCCAGACCTCTAACTTTCG  Raphanus sativus cv Early Scarlet Globe

               551    -    601
UN08421        --> TGCAAATCCTTGGCTGCTTGAGATTGAATGATCCGGTATTCGTTTGGGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989663       <-- TGCAAATCCTTGGCTGCTTGAGATTGAATGATCCGGTATTCGTTTGGGTA
EW722182       <-- TGCAAATCCTTGGCTGCTTGAGATTGAATGATCCGGTATTCGTTTGGGTA
EW722183       <-- TGCAAATCCTTGGCTGCTTGAGATTGAATGATCCGGTATTCGTTTGGGTA
FD557438       <-- TGCAAATCCTTGTCTGCTTGAGATTGAATGATCCGGTATTCGTTTGGGTA
EW729153       --> TGCAAATCCTTGGCTGCTTTAGATTGAATGATCCGGTATTCGTTTGGGTA
FD985418       --> TGCAAATCCTTGGCTGCTTGAGATTGAATGATCCGGTATTCGTTTGGGTA
EW726981       --> TGCAAATCCTTGGCTGCTTGAGATTGAATGATCCGGTATTCGTTTGGGTA
EW727274       --> TGCAAATCCTTGGCTGCTTGAGATTGAATGATCCGGTATTCGTTTGGGTA

               601    -    651
UN08421        --> CTGAT-A-TCGTAAATCGGGTTTGAGTCTGAATCCGAAACGGCGACAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989663       <-- CTGAT-AATCGTAAATCGGGTTTGAGTCTGAATCCGAAACGGCGACAGAG
EW722182       <-- CTGA----TCGTAAATCGGGTTTGAGTCTGAATCCGAAACGGCGACAGAG
EW722183       <-- CTGA----TCGTAAATCGGGTTTGAGTCTGAATCCGAAACGGCGACAGAG
FD557438       <-- CTGATTA-TCGTAAATCGGGTTTGAGTCTGAATCCGAAACGGCGACAGAG
EW729153       --> CTGATTA-TCGTAAATCGGGTTTGAGTCTGAATCCGAAACGGCGACAGAG
FD985418       --> CTGAT-AATCGTAAATCGGGTTTGAGTCTGAATCCGAAACGGCGA.....
EW726981       --> CTGAT----CGTAAATCGGGTTTGAGTCTGAATCCGAAACGGCGACAGAG
EW727274       --> CTGAT----CGTAAATCGGGTTTGAGTCTGAATCCGAAACGGCGACAGAG

               651    -    701
UN08421        --> GAAGGGTGGAGATGGAGAGACTTCCCATTTGAAAGAAGATAAAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD989663       <-- GAAGGGTGGAGATGGAGAGACTTCCCATTTGAAAGAAGATAAAAAA
EW722182       <-- GAAGGGTGGAGATGGAGAGACTTCCCATTTGAAAGAAGAT......
EW722183       <-- GAAGGGTGGAGATGGAGAGACTTCCCATTTGAAAGAAGAT......
FD557438       <-- GAAGGGTGGAGATcc...............................
EW729153       --> GAAGGGTGGAGATGGAGAGACCTCCCA...................
FD985418       --> ..............................................
EW726981       --> GAAGGGTGGAGATGGAGAGACTTCCCATTTGAAAGAAGAT......
EW727274       --> GAAGGGTGGAGATGGAGAGACTTCCCATTTGAAAGAAGAT......