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Alignment for radish unigene UN08425

               1      -     51
UN08425        --> GGACCACAAACATAGAAAGAAAACCAAAACCAAAGATAGTTGGAATCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD545610       <-- ..................................................
FD530347       <-- ..................................................
EY936735       <-- ..................................................
FD549560       --> GGACCACAAACATAGAAAGAAAACCAAAACCAAAGATAGTTGGAATCCAA
FD534398       --> .GACCACAAACATAGAAAGAAAACCAAAACCAAAGATAGTTGGAATCCAA
EY941088       --> ..........gggAGAAAGAAAACCAAAACCAAAGATAGTTGGAATCCAA
FY446710       --> .............................tCAAAGCTAGTTCGTGTCGAA
FY445520       --> ........................ggcaaatcAAGCTAGTTCGTGTCGAA
FY445531       --> .......................................ttcgtgtcgAA
FY437532       --> ...........................................gtgtcgA
FY441170       --> ..................................................

               51     -    101
UN08425        --> GATGGAAGGCAAGGAAGAAGACGTTAGAGTTGGAGCTAACAAGTTCCCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD545610       <-- ..................................................
FD530347       <-- ..................................................
EY936735       <-- ..................................................
FD549560       --> GATGGAAGGCAAGGAAGAAGACGTTAGAGTTGGAGCTAACAAGTTCCCGG
FD534398       --> GATGGAAGGCAAGGAAGAAGACGTTAGAGTTGGAGCTAACAAGTTCCCGG
EY941088       --> GATGGAAGGCAAGGAAGAAGACGTTAGAGTTGGAGCTAACAAGTTCCCGG
FY446710       --> GATGGAAGGCAAGGAAGAAGACGTTAGAGTTGGAGCTAACAAGTTCCCGG
FY445520       --> GATGGAAGGCAAGGAAGAAGACGTTAGAGTTGGAGCTAACAAGTTCCCGG
FY445531       --> GATGGAAGGCAAGGAAGAAGACGTTAGAGTTGGAGCTAACAAGTTCCCGG
FY437532       --> GATGGAAGGCAAGGAAGAAGACGTTAGAGTTGGAGCTAACAAGTTCCCGG
FY441170       --> ...........AGGAAGAAGACGTTAGAGTTGGAGCTAACAAGTTCCCGG

               101    -    151
UN08425        --> AGAGACAACCAATAGGAACTTCGGCTCAGAGCGACAAGGACTACAACGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD545610       <-- ..................................................
FD530347       <-- ..................................................
EY936735       <-- ..................................................
FD549560       --> AGAGACAACCAATAGGAACTTCGGCTCAGAGCGACAAGGACTACAACGAA
FD534398       --> AGAGACAACCAATAGGAACTTCGGCTCAGAGCGACAAGGACTACAACGAA
EY941088       --> AGAGATAACCAATAGGAACTTCGGCTCAGAGCGACAAGGACTACAACGAA
FY446710       --> AGAGACAACCAATAGGAACTTCGGCTCAGAGCGACAAGGACTACAACGAG
FY445520       --> AGAGACAACCAATAGGAACTTCGGCTCAGAGCGACAAGGACTACAACGAG
FY445531       --> AGAGACAACCAATAGGAACTTCGGCTCAGAGCGACAAGGACTACAACGAG
FY437532       --> AGAGACAACCAATAGGAACTTCGGCTCAGAGCGACAAGGACTACAACGAG
FY441170       --> AGAGACAACCAATAGGAACTTCGGCTCAGAGCGACAAGGACTACAACGAG

               151    -    201
UN08425        --> CCACCACCGGCTCCGCTTTTCGAGCCTGGTGAGCTTTCTTCATGGTCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD545610       <-- ..................................................
FD530347       <-- ..................................................
EY936735       <-- ..................................................
FD549560       --> CCACCACCGGCTCCGCTTTTCGAGCCTGGTGAGCTTTCTTCATGGTCCTT
FD534398       --> CCACCACCGGCTCCGCTTTTCGAGCCTGGTGAGCTTTCTTCATGGTCCTT
EY941088       --> CCACCACCGGCTCCGCTTTTCGAGCCTGGTGAGCTTTCTTCATGGTCCTT
FY446710       --> CCACCACCGGCTCCGCTTTTCGAGCCTGGTGAGCTTTCTTCATGGTCCTT
FY445520       --> CCACCACCGGCTCCGCTTTTCGAGCCTGGTGAGCTTTCTTCATGGTCCTT
FY445531       --> CCACCACCGGCTCCGCTTTTCGAGCCTGGTGAGCTTTCTTCATGGTCCTT
FY437532       --> CCACCACCGGCTCCGCTTTTCGAGCCTGGTGAGCTTTCTTCATGGTCCTT
FY441170       --> CCACCACCGGCTCCGCTTTTCGAGCCTGGTGAGCTTTCTTCATGGTCCTT

               201    -    251
UN08425        --> CTGGCGAGCCGGTATTGCTGAGTTTATAGCTACTTTCCTCTTCCTCTACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD545610       <-- ..................................................
FD530347       <-- ..................................................
EY936735       <-- ..................................................
FD549560       --> CTGGCGAGCTGGTATTGCTGAGTTTATAGCTACTTTCCTCTTCCTCTACA
FD534398       --> CTGGCGAGCTGGTATTGCTGAGTTTATAGCTACTTTCCTCTTCCTCTACA
EY941088       --> CTGGCGAGCTGGTATTGCTGAGTTTATAGCTACTTTCCTCTTCCTCTACA
FY446710       --> CTGGCGAGCCGGTATTGCTGAGTTTATAGCTACTTTCCTCTTCCTCTACA
FY445520       --> CTGGCGAGCCGGTATTGCTGAGTTTATAGCTACTTTCCTCTTCCTCTACA
FY445531       --> CTGGCGAGCCGGTATTGCTGAGTTTATAGCTACTTTCCTCTTCCTCTACA
FY437532       --> CTGGCGAGCCGGGATTGCTGAGTTTATAGCTACTTTCCTCTTCCTCTACA
FY441170       --> CTGGCGAGCCGGTATTGCTGAGTTTATAGCTACTTTCCTCTTCCTCTACA

               251    -    301
UN08425        --> TCACCGTTTTGACCGTGATGGGAGTTAAGAGGTCACCGAACATGTGTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD545610       <-- .................ATGGGAGT-AAAA-GTCACCCAACATGTGTGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD530347       <-- ........................TTAAAAGGTCACCCAACATGTGTGCT  Raphanus raphanistrum subsp. maritimus
EY936735       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD549560       --> TCATCGTTTTGACCGTCATGGGAGTTAAAAGGTCACCCAACATGTGTGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD534398       --> TCACCGTTTTGACCGTCATGGGAGTTAAAAGGTCACCCAACATGTGTGCT  Raphanus raphanistrum subsp. maritimus
EY941088       --> TCACCGTTTTGACCGTCATGGGAGTTAAAAGGTCACCCAACATGTGTGCT  Raphanus sativus cv Early Scarlet Globe
FY446710       --> TCACCGTTTTGACCGTGATGGGAGTTAAGAGGTCACCGAACATGTGTGCT  Raphanus sativus cv GSK3-1
FY445520       --> TCACCGTTTTGACCGTGATGGGAGTTAAGAGGTCACCGAACATGTGTGCT  Raphanus sativus cv GSK3-1
FY445531       --> TCACCGTTTTGACCGTGATGGGAGTTAAGAGGTCACCGAACATGTGTGCT  Raphanus sativus cv GSK3-1
FY437532       --> TCACCGTTTTGACCGTGATGGGAGTTAAGAGGTCACCGAACATGTGTGCT  Raphanus sativus cv GSK3-1
FY441170       --> TCACCGTTTTGACCGTGATGGGAGTTAAGAGGTCACCGAACATGTGTGCT  Raphanus sativus cv GSK3-1

               301    -    351
UN08425        --> TCTGTCGGCATTCAAGGTATCGCTTGGGCTTTTGGTGGTATGATCTTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD545610       <-- -CTGTCGGCATCCAAGGTATCGCTTGG-C-TTTGGTGGTATGATCTTTGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD530347       <-- TCTGTCGGCATCCAAGGTATCGCTTGGGCTTTTGGTGGTATGATCTTTGC  Raphanus raphanistrum subsp. maritimus
EY936735       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD549560       --> TCTGTCGGCATCCAAGGTATCGCTTGGGCTTTTGGTGGTATGATCTTTGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD534398       --> TCTGTCGGCATCCAAGGTATCGCTTGGGCTTTTGGTGGTATGATCTTTGC  Raphanus raphanistrum subsp. maritimus
EY941088       --> TCTGTCGGCATCCAAGGTATCGCTTGGGCTTTTGGTGGTATGATCTTTGC  Raphanus sativus cv Early Scarlet Globe
FY446710       --> TCTGTCGGAATTCAAGGTATCGCTTGGGCTTTCGGTGGCATGATCTTTGC  Raphanus sativus cv GSK3-1
FY445520       --> TCTGTCGGAATTCAAGGTATCGCTTGGGCTTTCGGTGGTATGATCTTTGC  Raphanus sativus cv GSK3-1
FY445531       --> TCTGTCGGAATTCAAGGTATCGCTTGGGCTTTCGGTGGTATGATCTTTGC  Raphanus sativus cv GSK3-1
FY437532       --> TCTGTCGGAATTCAAGGTATCGCTTGGGCTTTCGGTGGTATGATCTTTGC  Raphanus sativus cv GSK3-1
FY441170       --> TCTGTCGGAATTCAAGGTATCGCTTGGGCTTTCGGTGGTATGATCTTTGC  Raphanus sativus cv GSK3-1

               351    -    401
UN08425        --> CCTTGTCTACTGCACCGCCGGTATCTCCGGTGGGCACATCAACCCAGCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD545610       <-- CCTTGTCTACTGCACCGCCGGTATCTCCGGTGGACACATCAACCCAGCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD530347       <-- CCTTGTCTACTGCACCGCCGGTATCTCCGGTGGACACATCAACCCAGCAG  Raphanus raphanistrum subsp. maritimus
EY936735       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD549560       --> CCTTGTCTACTGCACCGCCGGTATCTCCGGTGGACACATCAACCCAGCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD534398       --> CCTTGTCTACTGCACCGCCGGTATCTCCGGTGGACACATCAACCCAGCAG  Raphanus raphanistrum subsp. maritimus
EY941088       --> CCTTGTCTACTGCACCGCCGGTATCTCCGGTGGAC-CATCAACCCAGCAG  Raphanus sativus cv Early Scarlet Globe
FY446710       --> CCTTGGCTACTGCACCGCCGGTATCTCCGGTGGGCACATCAACCCAGCGG  Raphanus sativus cv GSK3-1
FY445520       --> CCTTGTCTACTGCACCGCCGGTATCTCCGGTGGGCACATCAACCCAGCGG  Raphanus sativus cv GSK3-1
FY445531       --> CCTTGTCTACTGCACCGCCGGTATCTCCGGTGGGCACATCAACCCAGCGG  Raphanus sativus cv GSK3-1
FY437532       --> CCTTGTCTACTGCACCGCCGGTATCTCCGGTGGGCACATCAACCCAGCGG  Raphanus sativus cv GSK3-1
FY441170       --> CCTTGTCTACTGCACCGCCGGTATCTCCGGTGGGCACATCAACCCAGCGG  Raphanus sativus cv GSK3-1

               401    -    451
UN08425        --> TCACTTTTGGTCTGTTCTTAGCCCGGAAGTTGTCGCTCACCAGAGCTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD545610       <-- TCACTTTTGGTCTGTTCTTAGCCCGGAAGTTGTTGCTCACCAGAGCTTTG
FD530347       <-- TCACTTTTGGTCTGTTCTTAGCCCGGAAGTTGTCGCTCACCAGAGCTTTG
EY936735       <-- ..................................................
FD549560       --> TCACTTTTGGTCTGTTCTTAGCCCGGAAGTTGTTGCTCACCAGAGCTTTG
FD534398       --> TCACTTTTGGTCTGTTCTTAGCCCGGAAGTTGTCGCTCACCAGAGCTTTG
EY941088       --> TCACTTTTGGTCTGTTCTTAGCCCGGAAGTTGTCGCTCACCAGAGCTTTG
FY446710       --> TCACTTTTGGTCTGTTCTTAGCCCGGAAGTTGTCGCTCACCAGAGCTTTG
FY445520       --> TCACTTTTGGTCTGTTCTTAGCCCGGAAGTTGTCGCTCACCAGAGCTTTG
FY445531       --> TCACTTTTGGTCTGTTCTTAGCCCGGAAGTTGTCGCTCACCAGAGCTTTG
FY437532       --> TCACTTTTGGTCTGTTCTTAGCCCGGAAGTTGTCGCTCACCAGAGCTTTG
FY441170       --> TCACTTTTGGTCTGTTCTTAGCCCGGAAGTTGTCGCTCACCAGAGCTTTG

               451    -    501
UN08425        --> TACTACATAGTGATGCAGTGCTTGGGAGCCATATGTGGAGCTGGTGTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD545610       <-- TACTACATAGTGATGCAATGCTTGGGAGCCATATGTGGAGCTGGTGTGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD530347       <-- TACTACATAGTGATGCAATGCTTGGGAGCCATATGTGGAGCTGGTGTGGT  Raphanus raphanistrum subsp. maritimus
EY936735       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD549560       --> TACTACATAGTGATGCAATGCTTGGGAGCCATATGTGGAGCTGGTGTGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD534398       --> TACTACATAGTGATGCAATGCTTGGGAGCCATATGTGGAGCTGGTGTGGT  Raphanus raphanistrum subsp. maritimus
EY941088       --> TACTACATAGTGATGCAATGCTTGGGAGCCATATGTGGAGCTGGTGTGGT  Raphanus sativus cv Early Scarlet Globe
FY446710       --> TACTACATAGTGATGCAGTGCTTGGGAGCCATATGTGGAGCTGGTGTGGT  Raphanus sativus cv GSK3-1
FY445520       --> TACTACATAGTGATGCAGTGCTTGGGAGCCATATGTGGAGCTGGTGTGGT  Raphanus sativus cv GSK3-1
FY445531       --> TACTACATAGTGATGCAGTGCTTGGGAGCCATATGTGGAGCTGGTGTGGT  Raphanus sativus cv GSK3-1
FY437532       --> TACTACATAGTGATGCAGTGCTTAGGAGCCATCTGTGGAGCTGGTGTGGT  Raphanus sativus cv GSK3-1
FY441170       --> TACTACATAGTGATGCAGTGCTTGGGAGCCATATGTGGAGCTGGTGTGGT  Raphanus sativus cv GSK3-1

               501    -    551
UN08425        --> TAAAGGGTTCCAGCCTAAGCAGTACCAGGCTCTAGGAGGAGGAGCCAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD545610       <-- TAAAGGGTTCCAGTCTAAGCAGTACCAGGCTCTAGGAGGAGGAGCCAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD530347       <-- TAAAGGGTTCCAGCCTAAGCAGTACCAGGCTCTAGGAGGAGGAGCCAACA  Raphanus raphanistrum subsp. maritimus
EY936735       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD549560       --> TAAAGGGTTCCAGTCTAAGCAGTACCAGGCTCTAGGAGGAGGAGCCAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD534398       --> TAAAGGGTTCCAGCCTAAGCAGTACCAGGCTCTAGGAGGAGGAGCCAACA  Raphanus raphanistrum subsp. maritimus
EY941088       --> TAAAGGGTTCCAGCCTAAGCAGTACCAGGCTCTAGGAGGAGGAGCCAACA  Raphanus sativus cv Early Scarlet Globe
FY446710       --> TAAAGGGTTCCAGCCTAAGCAATACCAGGCTCTAGGAGGAGGAGCCAACA  Raphanus sativus cv GSK3-1
FY445520       --> TAAAGGGTTCCAGCCTAAGCAATACCAGGCTCTAGGAGGAGGAGCCAACA  Raphanus sativus cv GSK3-1
FY445531       --> TAAAGGGTTCCAGCCTAAGCAATACCAGGCTCTAGGAGGAGGAGCCAACA  Raphanus sativus cv GSK3-1
FY437532       --> TAAAGGGTTCCAGCCTAAGCAATACCAGGCTCTAGGAGGAGGAGCCAACA  Raphanus sativus cv GSK3-1
FY441170       --> TAAAGGGTTCCAGCCTAAGCAATACCAGGCTCTAGGAGGAGGAGCCAACA  Raphanus sativus cv GSK3-1

               551    -    601
UN08425        --> CTGTGGCTCCTGGATACACCAAAGGAAGTGGCCTTGGAGCTGAGATCATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD545610       <-- CTGTGGCTCCTGGATACACCAAAGGAAGTGGCCTTGGAGCTGAGATCATT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD530347       <-- CTGTGGCTCCTGGATACACCAAAGGAAGTGGCCTTGGAGCTGAGATCATT  Raphanus raphanistrum subsp. maritimus
EY936735       <-- .......TCCTGGATACACCAAAGGAAGTGGCCTTGGAGCTGAGATCATT  Raphanus sativus cv Early Scarlet Globe
FD549560       --> CTGTGGCTCCTGGATACACCAAAAGAAGTGGCCTTGGAGCTGAGATCATT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD534398       --> CTGTGGCTCCTGGATACACCAAAGGAAGTGGCCTTGGAGCTGAGATCATT  Raphanus raphanistrum subsp. maritimus
EY941088       --> CTGCGGCTCCTGGATACACCAAAGGAAGTGGCCTTGGAGCTGAGATCATT  Raphanus sativus cv Early Scarlet Globe
FY446710       --> CTGTGGCTCCTGGATACACCAAAGGAAGTGGTCTTGGAGCTGAGATCATT  Raphanus sativus cv GSK3-1
FY445520       --> CTGTGGCTCCTGGATACACCAAAGGAAGTGGTCTTGGAGCTGAGATCATT  Raphanus sativus cv GSK3-1
FY445531       --> CTGTGGCTCCTGGATACACCAAAGGAAGTGGTCTTGGAGCTGAGATCATT  Raphanus sativus cv GSK3-1
FY437532       --> CTGTGGCTCCTGGATACACCAAAGGAAGTGGTCTTGGAGCTGAGATCATT  Raphanus sativus cv GSK3-1
FY441170       --> CTGTGGCTCCTGGATACACCAAAGGAAGTGGTCTTGGAGCTGAGATCATT  Raphanus sativus cv GSK3-1

               601    -    651
UN08425        --> GGCACATTTGTTCTTGTTTACACAGTCTTCTCAGCAACTGACGCCAAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD545610       <-- GGCACATTTGTTCTTGTTTACACAGTCTTCTCAGCAACTGACGCCAAGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD530347       <-- GGCACATTTGTTCTTGTTTACACAGTCTTCTCAGCAACTGACGCCAAGAG  Raphanus raphanistrum subsp. maritimus
EY936735       <-- GGCACATTTGTTCTTGTTTACACAGTCTTCTCAGCAACTGACGCCAAGAG  Raphanus sativus cv Early Scarlet Globe
FD549560       --> GGCACATTTGTTCTTGTTTACACAGTCTTCTCAGCAACTGACGCCAAGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD534398       --> GGCACATTTGTTCTTGTTTACACAGTCTTCTCAGCAACTGACGCCAAGAG  Raphanus raphanistrum subsp. maritimus
EY941088       --> GGCACATTTGTTCTTGTTTACACAGTCTTCTCAGCAACTGACGCCAAGAG  Raphanus sativus cv Early Scarlet Globe
FY446710       --> GGCACATTTGTTCTTGTTTACACAGTCTTCTCAGCAACTGACGCAAAGAG  Raphanus sativus cv GSK3-1
FY445520       --> GGCACATTTGTTCTTGTTTACACAGTCTTCTCAGCAACTGACGCAAAGAG  Raphanus sativus cv GSK3-1
FY445531       --> GGCACATTTGTTCTTGTTTACACAGTCTTCTCAGCAACTGACGCAAAGAG  Raphanus sativus cv GSK3-1
FY437532       --> GGCACATTTGTTCTTGTTTACACAGTCTTCTCAGCAACTGACGCAAAGAG  Raphanus sativus cv GSK3-1
FY441170       --> GGCACATTTGTTCTTGTTTACACAGTCTTCTCAGCAACTGACGCAAAGAG  Raphanus sativus cv GSK3-1

               651    -    701
UN08425        --> AAACGCACGTGACTCTCATGTTCCCATTCTTGCACCACTCCCAATAGGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD545610       <-- AAACGCACGTGACTCTCATGTTCCCATTCTTGCACCACTCCCAATAGGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD530347       <-- AAACGCACGTGACTCTCATGTTCCCATTCTTGCACCACTCCCAATAGGGT  Raphanus raphanistrum subsp. maritimus
EY936735       <-- AAACGCACGTGACTCTCATGTTCCCATTCTTGCACCACTCCCAATAGGGT  Raphanus sativus cv Early Scarlet Globe
FD549560       --> AAACGCACGTGACTCTCATGTTCCCATTCTTGCAC-ACTCCCAATAGG-T  Raphanus raphanistrum subsp. raphanistrum (NY)
FD534398       --> AAACGCACGTGACTCTCATGTTCCCATTCTTGCACCACTC..........  Raphanus raphanistrum subsp. maritimus
EY941088       --> AAACGCACGTGACTCTCATGTTCCCATTCTTGCACCACTCCCAATAGGGT  Raphanus sativus cv Early Scarlet Globe
FY446710       --> AAACGCACGTGACTCTCATG..............................  Raphanus sativus cv GSK3-1
FY445520       --> AAACGCACGTGACTCTCATGTTCCCATTCTCGCACCACTCCCAATAGGGT  Raphanus sativus cv GSK3-1
FY445531       --> AAACGCACGTGACTCTCATGTTCCCATTCTCGCACCACTCCCAATAGGGT  Raphanus sativus cv GSK3-1
FY437532       --> AAACGCACGTGACTCTCATGTTCCCATTCTCGCACCACTCCCAATAGGGT  Raphanus sativus cv GSK3-1
FY441170       --> AAACGCACGTGACTCTCATGTTCCCATTCTCGCACCACTCCCAATAGGGT  Raphanus sativus cv GSK3-1

               701    -    751
UN08425        --> TTGCGGTTTTCTTGGTTCACTTAGCAACCATCCCAATCACTGGCACAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD545610       <-- TTGCGGTTTTCTTGGTTCACTTAGCAACCATCCCAATCACTGGCACAGGA
FD530347       <-- TTGCGGTTTTCTTGGTTCACTTAGCAACCATCCCAATCACTGGCACAGGA
EY936735       <-- TTGCGGTTTTCTTGGTTCACTTAGCAACCATCCCAATCACTGGCACAGGA
FD549560       --> TTGCGGT...........................................
FD534398       --> ..................................................
EY941088       --> TTGCGGTTTTCTTGGTTCACTTAGCAACCATCCCAATCACTGGCACAG-A
FY446710       --> ..................................................
FY445520       --> TTGCGGTTTTCTTGGTTCACTTAGCAACCATCCCAATCACTGGCACAGGA
FY445531       --> TTGCGGTTTTCTTGGTTCACTTAGCAACCATCCCAATCACTGGCACAGGA
FY437532       --> TTGCGGTTTTCTTGGTTCACTTAGCAACCATCCCAATCACTGGCACAGGA
FY441170       --> TTGCGGTTTTCTTGGTTCACTTAGCAACCATCCCAATCACTGGCACAGGA

               751    -    801
UN08425        --> ATCAACCCAGCAAGAAGTCTTGGAGCTGCAATCATATACAACAAAGACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD545610       <-- ATCAACCCAGCAAGAAGTCTTGGAGCTGCAATCATCTACAACAAAGACCA
FD530347       <-- ATCAACCCAGCAAGAAGTCTTGGAGCTGCAATCATCTACAACAAAGACCA
EY936735       <-- ATCAACCCAGCAAGAAGTCTTGGAGCTGCAATCATTTACAACAAAGACCA
FD549560       --> ..................................................
FD534398       --> ..................................................
EY941088       --> ATCAACCCAGCAAGAAGTCTTGGAGC........................
FY446710       --> ..................................................
FY445520       --> ATCAACCCAGCAAGAAGTCTTGGAGCTGCAATCATATACAACAAAGACCA
FY445531       --> ATCAACCCAGCAAGAAGTCTTGGAGCTGCAATCATATACAACAAAGACCA
FY437532       --> ATCAACCCAGCAAGAAGTCTTGGAGCTGCAATCATATACAACAAAGACCA
FY441170       --> ATCAACCCAGCAAGAAGTCTTGGAGCTGCAATCATATACAACAAAGACCA

               801    -    851
UN08425        --> TTCCTGGGACGACCACTGGGTGTTTTGGGTTGGACCATTCATTGGTGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD545610       <-- TTCCTGGGACGACCACTGGGCGTTTTGGGTTGGACCATTCATTGGTGCTG
FD530347       <-- TTCCTGGGACGACCACTGGGTGTTTTGGGTTGGACCATTCATTGGTGCTG
EY936735       <-- TTCCTGGGACGACCACTGGGTGTTTTGGGTTGGACCATTCATTGGTGCTG
FD549560       --> ..................................................
FD534398       --> ..................................................
EY941088       --> ..................................................
FY446710       --> ..................................................
FY445520       --> TTCCTGGGACGACCACTGGGTGTTTTGGGTTGGACCATTCATTGGTGCTG
FY445531       --> TTCCTGGGACGACCACTGGGTGTTTTGGGTTGGACCATTCATTGGTGCTG
FY437532       --> TTCCTGGGACGACCACTGGGTGTTTTGGGTTGGACCATTCATTGGTGCTG
FY441170       --> TTCCTGGGACGACCACTGGGTGTTTTGGGTTGGACCATTCATTGGTGCTG

               851    -    901
UN08425        --> CACTTGCTGCTCTTTACCATGTGATTGTCATCAGAGCCATCCCC-TTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD545610       <-- CACTTGCTGCTCTTTACCATGTGATTGTCATCAGAGCCATCCCC-TTCAA
FD530347       <-- CACTTGCTGCTCTTTACCATGTGATTGTCATCAGAGCCACCTCC-TTCAA
EY936735       <-- CACTTGCTGCTCTTTACCATGTGATTGTCATCAGAGCCATCCCC-TTCAA
FD549560       --> ..................................................
FD534398       --> ..................................................
EY941088       --> ..................................................
FY446710       --> ..................................................
FY445520       --> CACTTGCTGCTCTTTACCATGTGATTGTCATCAGAGCCATCCCCCTTCAA
FY445531       --> CACTTGCTGCTCTTTACCATGTGATTGTCATC..................
FY437532       --> CACTTGCTGCTCTTTACCATGTGATTGTCATCAGAGCCATCCC.......
FY441170       --> CACTTGCTGCTCTTTACCATGTGATTGTCATC..................

               901    -    951
UN08425        --> GTCCAGAAGCTAGGATAAAACAAGACATCAATTCCTCTCGTTTCTCGTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD545610       <-- GTCCAGAAGCTAGGATAAAACAAGACATCAATTCCTCTCGTTTCTCGTCT
FD530347       <-- GTCCAGAAGCTAGGATAAAACAAGACATCAATTCCTCTCGTTTCTCGTCT
EY936735       <-- GTCCAGAAGCTAGGATAAAACAAGACATCAATTCCTCTCGTTTCTCGTCT
FD549560       --> ..................................................
FD534398       --> ..................................................
EY941088       --> ..................................................
FY446710       --> ..................................................
FY445520       --> GTCCAGAAGCTA......................................
FY445531       --> ..................................................
FY437532       --> ..................................................
FY441170       --> ..................................................

               951    -   1001
UN08425        --> TGCATCCTTACTTGCTTCTTTTGTTGTGTATGTGCTATCTTCTTTGCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD545610       <-- TGCATCCTTACTTGCTTCTTTTGTTGTGTATGTGCTATCTTCTTTGCTTG
FD530347       <-- TGCATCCTTACTTGCTTCTTTTGTTGTGTATGTGCTATCTTCTTTGCTTA
EY936735       <-- TGCATCCTTACTTGCTTCTTTTGTTGTGTATGTGCTATCTTCTTTGCTTG
FD549560       --> ..................................................
FD534398       --> ..................................................
EY941088       --> ..................................................
FY446710       --> ..................................................
FY445520       --> ..................................................
FY445531       --> ..................................................
FY437532       --> ..................................................
FY441170       --> ..................................................

               1001   -   1051
UN08425        --> ATGCAATCGTTGTAACTTGCAAGTAAACAAGGAAGATTTTCTCAAATGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD545610       <-- ATGCAATCGTTGTAACTTGCAAGTAAACAAGGAAGATTTTCTCAAATGTT
FD530347       <-- ATGCAATCGTTGTAACTTGCAAGTAAACAAGGAAGATTTTCTCAAATGTT
EY936735       <-- ATGCAATCGTTGTAACTTGCAAGTAAACAAGGAAGATTTTCTCAAATGTT
FD549560       --> ..................................................
FD534398       --> ..................................................
EY941088       --> ..................................................
FY446710       --> ..................................................
FY445520       --> ..................................................
FY445531       --> ..................................................
FY437532       --> ..................................................
FY441170       --> ..................................................

               1051   -   1101
UN08425        --> AAACATAAAATCCTTCATGTATAAATAACAACCACAAACGGGTATTTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD545610       <-- AAACATAAAATCCTTCATGTATAAATAACAACCACAAACGGGTATTTGAT
FD530347       <-- AAACATAAAATCCTTCATGTATAAATAACAACCACAAACGGGTATTTGAT
EY936735       <-- AAACATAAAATCCTTCATGTATAAATAACAACCACAAACGGGTATTTGAT
FD549560       --> ..................................................
FD534398       --> ..................................................
EY941088       --> ..................................................
FY446710       --> ..................................................
FY445520       --> ..................................................
FY445531       --> ..................................................
FY437532       --> ..................................................
FY441170       --> ..................................................

               1101   -   1151
UN08425        --> TGAAAGCTATGCAACGTTTTATTTTCCTTTACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD545610       <-- TGAAAGCTATGCAACGTTTTATTTTC.......
FD530347       <-- Tc...............................
EY936735       <-- TGAAAGCTATGCAACGTTTTATTTTCCTTTACC
FD549560       --> .................................
FD534398       --> .................................
EY941088       --> .................................
FY446710       --> .................................
FY445520       --> .................................
FY445531       --> .................................
FY437532       --> .................................
FY441170       --> .................................