Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN08430

               1      -     51
UN08430        --> ATACACGACACAATGATCACCTGCTGGTTTACTTAACTCAAAAGTCACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568490       <-- ..................................................
EV568618       <-- ..................................................
EX754165       <-- ..................................................
EW713822       <-- ..................................................
EW713914       <-- ..................................................
EV573204       --> ATACACGACACAATGATCACCTGCTGGTTTACTTAACTCAAAAGTCACAA
EV573298       --> ATACACGACACAATGATCACCTGCTGGTTTACTTAACTCAAAAGTCACAA
EW718495       --> .....CGACACAATGATCACCTGCTGGTTTACTTAACTCAAAAGTCACAA
EW718757       --> .....CGACACAATGATCACCTGCTGGTTTACTTAACTCAAAAGTCACAA
EX758554       --> .............................TACTTAACTCAAAAGTCACAA
FD546329       --> .............................TACTTAACTCAAAAGTCACAA

               51     -    101
UN08430        --> CATTTTAACATTCTTACTACAAAGCTTTTTACAAACAAAGTGAGTGAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568490       <-- ..................................................
EV568618       <-- ..................................................
EX754165       <-- ..................................................
EW713822       <-- ..................................................
EW713914       <-- ..................................................
EV573204       --> CATTTTAACATTCTTACTACAAAGCTTTTTACAAACAAAGTGAGTGAATC
EV573298       --> CATTTTAACATTCTTACTACAAAGCTTTTTACAAACAAAGTGAGTGAATC
EW718495       --> CATTTTAACATTCTTACTACAAAGCTTTTTACAAACAAAGTGAGTGAATC
EW718757       --> CATTTTAACATTCTTACTACAAAGCTTTTTACAAACAAAGTGAGTGAATC
EX758554       --> CATTT-AACATTCTTACTACAAAGCTTTTAACAAACAAAGTGAGTGAATC
FD546329       --> CGTTTTAACATTCTTACTACAAAGCCTTTTACAAACAAAGTGAGTGAATC

               101    -    151
UN08430        --> TGACAGTAACAAAACTCTTCAGGCTTGAGCACCGAGTTCGAGCAGTAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568490       <-- ...................................agTCGAGCAGTAAAG
EV568618       <-- ..................................................
EX754165       <-- ..................................................
EW713822       <-- ..................................................
EW713914       <-- ..................................................
EV573204       --> TGACAGTAACAAAACTCTTCAGGCTTGAGCACCGAGTTCGAGCAGTAAAG
EV573298       --> TGACAGTAACAAAACTCTTCAGGCTTGAGCACCGAGTTCGAGCAGTAAAG
EW718495       --> TGACAGTAACAAAACTCTTCAGGCTTGAGCACCGAGTTCGAGCAGTAAAG
EW718757       --> TGACAGTAACAAAACTCTTCAGGCTTGAGCACCGAGTTCGAGCAGTAAAG
EX758554       --> TGACAGTAACAAAACTCTTCAGGCTTGAGCACCGAGTTCGAGCAGTAAAG
FD546329       --> TGACAGTAACAAAACTCTTCAGGCTTGAGCACCGAGTTCGAGCAGTAAAG

               151    -    201
UN08430        --> TGTGATTTATCGCATCAGATCCCGGTCCCTTGAACTGAATCGGACCAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568490       <-- TGTGATTTATCGCATCAGATCCCGGTCCCTTGAACTGAATCGGACCAGGA
EV568618       <-- ..................................................
EX754165       <-- ..................................................
EW713822       <-- ..................................................
EW713914       <-- ..................................................
EV573204       --> TGTGATTTATCGCATCAGATCCCGGTCCCTTGAACTGAATCGGACCAGGA
EV573298       --> TGTGATTTATCGCATCAGATCCCGGTCCCTTGAACTGAATCGGACCAGGA
EW718495       --> TGGGATTTATCGCATCAAATCCCGGTCCCTTGAACTGAATCGGACCAGGA
EW718757       --> TGTGATTTATCGCATCAAATCCCGGTCCCTTGAACTGAATCGGACCAGGA
EX758554       --> TGTGATTTATCGCATCAGATCCCGGTCCCTTGAACTGAATCGGACCAGGA
FD546329       --> TGTGGTTTATCGCATCAGATCCCGGTCCCTTGAACTGAATCGGACCAGGA

               201    -    251
UN08430        --> CTAATGTATCTATTCTTCAAAGCCCATTCTTCACGCTGCGATGCAAATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568490       <-- CTAATGTATCTATTCTTCAAAGCCCATTCTTCACGCTGCGATGCAAATTT
EV568618       <-- ..................................................
EX754165       <-- ..................................................
EW713822       <-- ..................................................
EW713914       <-- ..................................................
EV573204       --> CTAATGTATCTATTCTTCAAAGCCCATTCTTCACGCTGCGATGCAAATTT
EV573298       --> CTAATGTATCTATTCTTCAAAGCCCATTCTTCACGCTGCGATGCAAATTT
EW718495       --> CTAATGTATCTATTCTTCAAAGCCCATTCTTCACGCTGCGATGCAAATTT
EW718757       --> CTAATGTATCTATTCTTCAAAGCCCATTCTTCACGCTGCGATGCAAATTT
EX758554       --> CTAATGTATCTATTCTTCAAAGCCCATTCTTCACGCTGCGATGCAAATTT
FD546329       --> CTAATGTATCTATTCTTCAAAGCCCATTCTTCACGCTGCGATGCAAATTT

               251    -    301
UN08430        --> CTTAAACGGTGCACCTTCAAGTTCAACCATAGCTTTCTTGATAACAGGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568490       <-- CTTAAACGGTGCACCTTCAAGTTCAACCATAGCTTTCTTGATAACAGGCT
EV568618       <-- .................CAAGTTCAACCATAGCTTTCTTGATAACAGGCT
EX754165       <-- ..................................................
EW713822       <-- ..................................................
EW713914       <-- ..................................................
EV573204       --> CTTAAACGGTGCACCTTCAAGTTCAACCATAGCTTTCTTGATAACAGGCT
EV573298       --> CTTAAACGGTGCACCTTCAAGTTCAACCATAGCTTTCTTGATAACAGGCT
EW718495       --> CTTAAACGGGGCACCTTCAAGTTCAACCATAGCTTTCTTGATAACAGGCT
EW718757       --> CTTAAACGGGGCACCTTCAAGTTCAACCATAGCTTTCTTGATAACAGGCT
EX758554       --> CTTAAACGGTGCACCTTCAAGTTCAACCATAGCTTTCTTGATAACAGGCT
FD546329       --> CTTAAACGGTGCACCTTCAAGTTCAACCATAGCTTTCTTGATAACAGGCT

               301    -    351
UN08430        --> TGAATTTACCATGTCTTCTCTCAACATCCATCAATGAAGTTAGCGGTGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568490       <-- TGAATTTACCATGTCTTCTCTCAACATCCATCAATGAAGTTAGCGGTGTA
EV568618       <-- TGAATTTACCATGTCTTCTCTCAACATCCATCAATGAAGTTAGCGGTGTA
EX754165       <-- ..............CTTCTCTCAACATCCATCAATGATGTCAGCGGTGTA
EW713822       <-- .................................ATGAAGT-AGCGGTGTA
EW713914       <-- ........................................TAGCGGTGTA
EV573204       --> TGAATTTACCATGTCTTCTCTCAACATCCATCAATGAAGTTAGCGGTGTA
EV573298       --> TGAATTTACCATGTCTTCTCTCAACATCCATCAATGAAGTTAGCGGTGTA
EW718495       --> TGAATTTACCATGTCTTCTCTCAACATCCATCAATGAAGTTAGCGGTGTA
EW718757       --> TGAATTTACCATGTCTTCTCTCAACATCCATCAATGAAGTTAGCGGTGTA
EX758554       --> TGAATTTACCATGTCTTCTCTCAACATCCATCAATGATGTCAGCGGTGTA
FD546329       --> TGAATTTACCATGTCTTCTCTCAACATCCATCAATGAAGTTAGCGGTGTA

               351    -    401
UN08430        --> CCACCAACGGTCCATTTCTCAACAGGAGCAGCCAAATTCCCAACCGATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568490       <-- CCACCAACGGTCCATTTCTCAACAGGAGCAGCCAAATTCCCAACCGATGA
EV568618       <-- CCACCAACGGTCCATTTCTCAACAGGAGCAGCCAAATTCCCAACCGATGA
EX754165       <-- CCACCAACGGTCCATTTCTCAACTGGAGCAGCCAAATTCCCAACCGATGA
EW713822       <-- CCACCAACGGTCCATTTCTCAACAGGAGCAGCCAAATTCCCAACCGATGA
EW713914       <-- CCACCAACGGTCCATTTCTCAACAGGAGCAGCCAAATTCCCAACCGATGA
EV573204       --> CCACCAACGGTCCATTTCTCAACAGGAGCAGCCAAATTCCCAACCGATGA
EV573298       --> CCACCAACGGTCCATTTCTCAACAGGAGCAGCCAAATTCCCAACCGATGA
EW718495       --> CCACCAACGGTCCATTTCTCAACAGGAGCAGCCAAATTCCCAACCGATGA
EW718757       --> CCACCAACGGTCCATTTCTCAACAGGAGCAGCCAAATTCCCAACCGATGA
EX758554       --> CCACCAACGGTCCATTTCTCAACTGGAGCAGCCAAATTCCCAACCGATGA
FD546329       --> CCACCAACGGTCCATTTCTCAACAGGAGCAGCCAAATTCCCAACCGATGA

               401    -    451
UN08430        --> GATTAAACCGGTCTTTCCACTCTGGAGAAGTGATCCAGCACCGCAACCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568490       <-- GATTAAACCGGTCTTTCCACTCTGGAGAAGTGATCCAGCACCGCAACCCA
EV568618       <-- GATTAAACCGGTCTTTCCACTCTGGAGAAGTGATCCAGCACCGCAACCCA
EX754165       <-- GATTAAACCGGTCTTTCCACTCTGGAGAAGTGATCCAGCACCGTAACCCA
EW713822       <-- GAT-AAACCGGTCTTTCCACTCTGGAGAAGTGATCCAGCACCGCAACCCA
EW713914       <-- GATTAAACCGGTCTTTCCACTCTGGAGAAGTGATCCAGCACCGCAACCCA
EV573204       --> GATTAAACCGGTCTTTCCACTCTGGAGAAGTGATCCAGCACCGCAACCCA
EV573298       --> GATTAAACCGGTCTTTCCACTCTGGAGAAGTGATCCAGCACCGCAACCCA
EW718495       --> AATTAAACCGGTCTTTCCACTCTGGAAAAGTGATCCAGCACCGCAACCCA
EW718757       --> AATTAAACCGGTCTTTCCACTCTGGAAAAGTGATCCAGCACCGCAACCCA
EX758554       --> GATTAAACCGGTCTTTCCACTCTGGAGAAGTGATCCAGCACCGTAACCCA
FD546329       --> GATTAAACCGGTCTTTCCACTCTGGAGAAGTGATCCAGCACCGCAACCCA

               451    -    501
UN08430        --> ATGCGTAGCAGTAAGTTGCATCGAAATTTGTAGGCAATCCACAT-CTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568490       <-- ATGCGTAGCAGTAAGTTGCATCGAAATTTGTAGGCAATCCACAT-CTTCC
EV568618       <-- ATGCGTAGCAGTAAGTTGCATCGAAATTTGTAGGCAATCCACAT-CTTCC
EX754165       <-- ATGCGTAACAATAAGTTGCATCGAAATTTGTAGGCAATCCACAT-CTTCC
EW713822       <-- ATGCGTAGCAGTAAGTTGCATCGAAATTTGTAGGCAATCCACATTCTCCC
EW713914       <-- ATGCGTAGCAGTAAGTTGCATCGAAATTTGTAGGCAATCCACAT-CTTCC
EV573204       --> ATGCGTAGCAGTAAGTTGCATCGAAATTTGTAGGCAATCCACAT-CTTCC
EV573298       --> ATGCGTAGCAGTAAGTTGCATCGAAATTTGTAGGCAATCCACAT-CTTCC
EW718495       --> ATGCGTAGCAGTAAGTTGCATCGAAATTTGTAGGCAATCCACAT-CTTCC
EW718757       --> ATGCGTAGCAGTAAGTTGCATCGAAATTTGTAGGCAATCCACAT-CTTCC
EX758554       --> ATGCGTAACAATAAGTTGCATCGAAATTTGTAGGCAATCCACAT-CTTCC
FD546329       --> ATGCGTAGCAGTAAGTTGCATCGAAATTTGTAGGCAATCCACAT-CTTCC

               501    -    551
UN08430        --> CTCATACCCAAAGAAGTGCGATTTGCCCATGAACTCGCGTTTATATGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568490       <-- CTCATACCCAAAGAAGTGCGATTTGCCCATGAACTCGCGTTTATATGAAC
EV568618       <-- CTCATACCCAAAGAAGTGCGATTTGCCCATGAACTCGCGTTTATATGAAC
EX754165       <-- CTCATACCCAAAGAAGTGTGATTTCCCCATGAACTCTCGTTTATAAGAAC
EW713822       <-- CTCATACCCAAAGAAGTGCGATTTGCCCATGAACTCGCGTTTATATGAAC
EW713914       <-- CTCATACCCAAAGAAGTGCGATTTGCCCATGAACTCGCGTTTATATGAAC
EV573204       --> CTCATACCCAAAGAAGTGCGATTTGCCCATGAACTCGCGTTTATATGAAC
EV573298       --> CTCATACCCAAAGAAGTGCGATTTGCCCATGAACTCGCGTTTATATGAAC
EW718495       --> CTCATACCCAAAGAAGTGCGATTTGCCCATGAACTCGCGTTTATATGAAC
EW718757       --> CTCATACCCAAAGAAGTGCGATTTGCCCATGAACTCGCGTTTATATGAAC
EX758554       --> CTCATACCCAAAGAAGTGTGATTTCCCCATGAACTCTCGTTTATAAGAAC
FD546329       --> CTCATACCCAAAGAAGTGCGATTTGCCCATGAACTCGCGTTTATATGAAC

               551    -    601
UN08430        --> CATCCTTCTTCTTTTTCTCTAGCTCGGTTTCAACCATTTGAATCAGCATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568490       <-- CATCCTTCTTCTTTTTCTCTAGCTCGGTTTCAACCATTTGAATCAGCATT
EV568618       <-- CATCCTTCTTCTTTTTCTCTAGCTCGGTTTCAACCATTTGAATCAGCATT
EX754165       <-- CATCCTTCT-CTTTTTCTCTAGCTCGGTTTCAACCATTTGAATCAGCATT
EW713822       <-- CATCTTTCTTCTTTTTCTCTAGCTCGGTTTCAACCATTTGAATCAGCATT
EW713914       <-- CATCCTTCTTCTTTTTCTCTAGCTCGGTTTCAACCATTTGAATCAGCATT
EV573204       --> CATCCTTCTTCTTTTTCTCTAGCTCGGTTTCAACCATTTGAATCAGCATT
EV573298       --> CATCCTTCTTCTTTTTCTCTAGCTCGGTTTCAACCATTTGAATCAGCATT
EW718495       --> CATCCTTCTTCTTTTTCTCTAGCTCGGTTTCAACCATTTGAATCAGCATT
EW718757       --> CATCCTTCTTCTTTTTCTCTAGCTCGGTTTCAACCATTTGAATCAGCATT
EX758554       --> CATCCTTCT-CTTTTTCTCTAGCTCGGTTTCAACCATTTGAATCAGCATT
FD546329       --> CATCCTTCTTCTTTTTCTCTAGCTCGGTTTCAACCATTTGAATCAGCATT

               601    -    651
UN08430        --> TTCTCTGTCTCTATTTTAGCCACCTGGACATTTCCATGTGGATCTCTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568490       <-- TTCACTGTCTCTATTTTAGCCACCTGGACATTTCCATGTGGATCTCTCTC  Raphanus raphanistrum subsp. landra
EV568618       <-- TTCACTGTCTCTATTTTAGCCACCTGGACATTTCCATGTGGATCTCTCTC  Raphanus raphanistrum subsp. landra
EX754165       <-- TTCTCAGTCTCTATTTTAGCCACCTGGACATTTCCATGTGGATCTCTCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW713822       <-- TTCTCTGTCTCTATTTTAGCCACCTGGACATTTCCATGTGGATCTCTCTC  Raphanus sativus var. oleiformis
EW713914       <-- TTCTCTGTCTCTATTTTAGCCACCTGGACATTTCCATGTGGATCTCTCTC  Raphanus sativus var. oleiformis
EV573204       --> TTCACTGTCTCTATTTTAGCCACCTGGACATTTCCATGTGGATCTCTCTC  Raphanus raphanistrum subsp. landra
EV573298       --> TTCACTGTCTCTATTTTAGCCACCTGGA......................  Raphanus raphanistrum subsp. landra
EW718495       --> TTCTCTGTCTCTATTTTAGCCACCTGGACATTTCCATGTGGATCTCTCTC  Raphanus sativus var. oleiformis
EW718757       --> TTCTCTGTCTCTATTTTAGCCACCTGGACATTTCCATGTGGATCTCTCTC  Raphanus sativus var. oleiformis
EX758554       --> TTCTCAGTCTCTATTTTAGCCACCTGGACATTTCCATGTGGATCTCTCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD546329       --> TTCTCTGTCTCTATTTT.................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               651    -    701
UN08430        --> AAGCATCAGTTGTTCCTGAATTGTTTGAGGAAGAAACTCAAAAAGCTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568490       <-- AAGCATCAGTTGTTCCTGAATTGTTTGAGGAAGAAACTCAAAAAGCTTTA
EV568618       <-- AAGCATCAGTTGTTCCTGAATTGTTTGAGGAAGAAACTCAAAAAGCTTTA
EX754165       <-- AAGCATCAGTTGTTCCTGAATTGTTTGAGGAAGAAACTCAAAAAGCTTTA
EW713822       <-- AAGCATCAGTTGTTCCTGAATTGTTTGAGGAAGAAACTCAAAAAGCTTTA
EW713914       <-- AAGCATCAGTTGTTCCTGAATTGTTTGAGGAAGAAACTCAAAAAGCTTTA
EV573204       --> AAGCATCAGTTGTTCCTGAATTGTTTGAGGAAGAAACTCAAAAAGCTTTA
EV573298       --> ..................................................
EW718495       --> AAGCATCAGTTGTTCCTGAATTGTTTGAG.....................
EW718757       --> AAGCATCAGTTGTTCCTGAATTGTTTGAG.....................
EX758554       --> AAGCATCAGTTGTTCCTGAATTGTTTGAGGAAGAAACTCAAAAAGCTTTA
FD546329       --> ..................................................

               701    -    751
UN08430        --> GAGTCTCCTCTTTTAGATTCTTCTTCCATTGTCCTTCTTCGTCAACGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568490       <-- GAGTCTCCTCTTTTAGATTCTTCTTCCATTGTCCTTCTTCGTCAACGTTT
EV568618       <-- GAGTCTCCTCTTTTAGATTCTTCTTCCATTGTCCTTCTTCGTCAACGTTT
EX754165       <-- GAGTCTCCTCTTTTAGATTCTTCTTCCATTGTCCTTCTTCATCGACGTTT
EW713822       <-- GAGTCTCCTCTTTTAGATTCTTCTTCCATTGTCCTTCTTCGTCAACGTTT
EW713914       <-- GAGTCTCCTCTTTTAGATTCTTCTTCCATTGTCCTTCTTCGTCAACGTTT
EV573204       --> GAGTCTCCTCTTTTAGATTCTTCTTCCATTGTCCTTCTTCGTCAACGTTT
EV573298       --> ..................................................
EW718495       --> ..................................................
EW718757       --> ..................................................
EX758554       --> GAGTCTCCTCTTTTAGATTCTTCTTCCATTGTCCTTCTTCATCGACGTTT
FD546329       --> ..................................................

               751    -    801
UN08430        --> CCTTGGGCTAAGATTTCGTTCAGTT-CTGAAATAAGCTCTTGGACCTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568490       <-- CCTTGGGCTAAGATTTCGTTCAGTT-CTGAAATAAGCTCTTGGACCTCAG
EV568618       <-- CCTTGGGCTAAGATTTCGTTCAGTT-CTGAAATAAGCTCTTGGACCTCAG
EX754165       <-- CCTTGAGCTAAGATTTCGTTCAGTT-CCGAAATAAGCTCTTGGACCTCAG
EW713822       <-- CCTTGGGCTAAGATTTCGTTCAGTTTCTGAAATAAGCTCTTGGACCTCAG
EW713914       <-- CCTTGGGCTAAGATTTCGTTCAGTT-CTGAAATAAGCTCTTGGACCTCAG
EV573204       --> CCTTGGGCTAAGATTTCGTTCAGTT-CTGAAATAAGCTCTTGGACCTCAG
EV573298       --> ..................................................
EW718495       --> ..................................................
EW718757       --> ..................................................
EX758554       --> CCTTGAGCTAAGATTTCGTTCAGTT-CCGAAATAAGCTCTTGGACC....
FD546329       --> ..................................................

               801    -    851
UN08430        --> GG-ATGAAATCGATTAGACCTTCAGG-CACAAGAATGACACCATAGTTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568490       <-- GG-ATGAAATCGATTAGACCTTCAGG-CACAAGAATGACACCATAGTTAT
EV568618       <-- GG-ATGAAATCGATTAGACCTTCAGG-CACAAGAATGACACCATAGTTAT
EX754165       <-- GG-ATGAAATCAATTAGACCTTCAGG-AACAAGAATGACACCATAGTTAT
EW713822       <-- GGGATGAAATCGATTAGACCTTCAGGGCACAAGAATGACACCATAGTTAT
EW713914       <-- GG-ATGAAATCGATTAGACCTTCAGG-CACAAGAATGACACCATAGTTAT
EV573204       --> GG-ATGAAATCGATTAGACCTTCAG--CACAAGAATGACACCATAGTTAT
EV573298       --> ..................................................
EW718495       --> ..................................................
EW718757       --> ..................................................
EX758554       --> ..................................................
FD546329       --> ..................................................

               851    -    901
UN08430        --> AACCATTTTCAGCGCGTTTACAGATCACATCAACAATGTAATCCGTAACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568490       <-- AACCATTTTCAGCGCGTTTACAGATCACATCAACAATGTAATCCGTAACG
EV568618       <-- AACCATTTTCAGCGCGTTTACAGATCACATCAACAATGTAATCCGTAACG
EX754165       <-- AACCATTTTCAGCGCGTTTACGGATCACATCAACAATGTAATCCGTAACG
EW713822       <-- AACCATTTTCAGCGCGTTTACAGATCACATCAACAATGTAATCCGTAACG
EW713914       <-- AACCATTTTCAGCGCGTTTACAGATCACATCAACAATGTAATCCGTAACG
EV573204       --> AACCATTTTCAGCGCGTTTACAGATCACATCAACAATGTAATCCGTAACG
EV573298       --> ..................................................
EW718495       --> ..................................................
EW718757       --> ..................................................
EX758554       --> ..................................................
FD546329       --> ..................................................

               901    -    951
UN08430        --> TTTTTCAACGTTAGTTTCTTCTCCGAAACCTCTTCTCCAATAATGGTAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568490       <-- TTTTTCAACGTTAGTTTCTTCTCCGAAACCTCTTCTCCAATAATGGTAAT
EV568618       <-- TTTTTCAACGTTAGTTTCTTCTCCGAAACCTCTTCTCCAATAATGGTAAT
EX754165       <-- TTTTTCAACGTTAGTTTCTTCTCGGAAACCTCTTCTCCAATAATGGTAAT
EW713822       <-- TTTTTCAACGTTAGTTTCTTCTCCGAAACCTCTTCTCCAATAATGGTAAT
EW713914       <-- TTTTTCAACGTTAGTTTCTTCTCCGAAACCTCTTCTCCAATAATGGTAAT
EV573204       --> TTTTTCAACGTTAGTTTCTTCTCCGAAACCTCTTCTCCAATA........
EV573298       --> ..................................................
EW718495       --> ..................................................
EW718757       --> ..................................................
EX758554       --> ..................................................
FD546329       --> ..................................................

               951    -   1001
UN08430        --> GTTTGGATGGGTTTGCAAAGCGCATTCAAGTGTAATATGAGAAGCAGCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568490       <-- GTTTGGATGGGTTTGCAAAGCGCATTCAAGTGTAATATGAGAAGCAGCAC
EV568618       <-- GTTTGGATGGGTTTGCAAAGCGCATTCAAGTGTAATATGAGAAGCAGCAC
EX754165       <-- GTTTGGATGGGTTTGCAAAGCGCATCCAAGTGTAATATGAGAAGCAGCAC
EW713822       <-- GTTTGGATGGGTTTGCAAAGCGCATTCAAGTGTAATATGAGAAGCAGCAC
EW713914       <-- GTTTGGATGGGTTTGCAAAGCGCATTCAAGTGTAATATGAGAAGCAGCAC
EV573204       --> ..................................................
EV573298       --> ..................................................
EW718495       --> ..................................................
EW718757       --> ..................................................
EX758554       --> ..................................................
FD546329       --> ..................................................

               1001   -   1051
UN08430        --> GGCCCATAAGACGCACAAAGTGGTAGTATTTTCCCGTGGAACGTGCATCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568490       <-- GGCCC.............................................
EV568618       <-- GGCCC.............................................
EX754165       <-- GGCCCATAAGACGCACAAAGTGGTAGTATTTTCC................
EW713822       <-- GGCCCATAAGACGCACAAAGTGGTAGTATTTTCCCGTGGAACGTG.....
EW713914       <-- GGCCCATAAGACGCACAAAGTGGTAGTATTTTCCCGTGGAACGTGCATCG
EV573204       --> ..................................................
EV573298       --> ..................................................
EW718495       --> ..................................................
EW718757       --> ..................................................
EX758554       --> ..................................................
FD546329       --> ..................................................

               1051   -   1101
UN08430        --> ATCATAACATTTCCAATCATTTCTGAGTATATCTTGCAAGCAGTGTCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568490       <-- ..................................................
EV568618       <-- ..................................................
EX754165       <-- ..................................................
EW713822       <-- ..................................................
EW713914       <-- ATCATAACATTTCCAATCATTTCTGAGTATATCTTGCAAGCAGTGTCAAA
EV573204       --> ..................................................
EV573298       --> ..................................................
EW718495       --> ..................................................
EW718757       --> ..................................................
EX758554       --> ..................................................
FD546329       --> ..................................................

               1101   -   1151
UN08430        --> CCCGAAACTGGTGGGGACTTCTTTGCTCTTTAAATCACCATCGATTGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568490       <-- ..................................................
EV568618       <-- ..................................................
EX754165       <-- ..................................................
EW713822       <-- ..................................................
EW713914       <-- CCCGAAACTGGTGGGGACTTCTTTGCTCTTTAAATCACCATCGATTGTTT
EV573204       --> ..................................................
EV573298       --> ..................................................
EW718495       --> ..................................................
EW718757       --> ..................................................
EX758554       --> ..................................................
FD546329       --> ..................................................

               1151   -   1201
UN08430        --> TCGGACAGCCAATAACCTTAGTTTTCATGTTTTTACCTCTCCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV568490       <-- ............................................
EV568618       <-- ............................................
EX754165       <-- ............................................
EW713822       <-- ............................................
EW713914       <-- TCGGACAGCCAATAACCTTAGTTTTCATGTTTTTACCTCTCCCC
EV573204       --> ............................................
EV573298       --> ............................................
EW718495       --> ............................................
EW718757       --> ............................................
EX758554       --> ............................................
FD546329       --> ............................................