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Alignment for radish unigene UN08447

               1      -     51
UN08447        --> AGCAAATAATTCAGTGATAAATTACTTTCGAAGTAATACATAAACAAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971653       <-- AGCAAATAATTCAGTGATAAATTACTTTCGAAGTAATACATAAACAAAGG
EX771155       <-- ....................................TACTTAAACAAAGG
EV569575       <-- ....................................tgctTAAACAAAGG
EX757956       <-- ..................................................
EY905663       <-- ..................................................
EX755230       <-- ..................................................
EX759365       --> .....................................ACATAAACAAAGG
EV574088       --> .....................................gctTAAACAAAGG
EX775250       --> .....................................actTAAACAAAGG
EY918970       --> .....................................gctTAAACAAAGG
EX761413       --> .........................................AAACAAAGG
EY902043       --> ..................................................

               51     -    101
UN08447        --> CATAAGCATTAGCATCAAGCAAACCATACAAAATATAGATTACCAAAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971653       <-- CATAAGCATTAGCATCAAGCAAACCATACAAAATATAGAT-ACCAAAATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX771155       <-- CATAAGCATTAGCATCAAGCAGACCATACAAAATATAGATTACCAAAATC  Raphanus raphanistrum subsp. landra
EV569575       <-- CATAAGCATTAGCATCAAGCAAACCATACAAAATATAGATTACCAAAATC  Raphanus raphanistrum subsp. landra
EX757956       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905663       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755230       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759365       --> CATAAGCATTAGCATCAAGCAAACCATACAAAATATAGAT-ACCAAAATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV574088       --> CATAAGCATTAGCATCAAGCAAACCATACAAAATATAGATTACCAAAATC  Raphanus raphanistrum subsp. landra
EX775250       --> CATAAGCATTAGCATCAAGCAGACCATACAAAATATAGATTACCAAAATC  Raphanus raphanistrum subsp. landra
EY918970       --> CATAAGCATTAGCATCAAGCAAACCATACAAAATATAGATTACCAAAATC  Raphanus raphanistrum subsp. landra
EX761413       --> CATAAGCATTAGCATCAAGCAAACCATACAAAATATAGAT-ACCAAAATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902043       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               101    -    151
UN08447        --> CCATATAAGCACAATAATACAAAATCCACAA-GATAACATATGGCACTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971653       <-- CCATAAAAGCACAATAATACAAAATCCACAA-GATAACATATGGCACTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX771155       <-- CCATATAAGCACAATAATACAAAATCCACAA-GATAACATGTGGCACTAT  Raphanus raphanistrum subsp. landra
EV569575       <-- CCATATAAGCACAATAATACAAAATCCACAA-GATAACATATGGCACTAT  Raphanus raphanistrum subsp. landra
EX757956       <-- .........CACAATAATACAAAATCCACAAAGATAACATATGGCACTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905663       <-- ...............AATACAAAATCCACAA-GATAACATATGGCACTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755230       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759365       --> CCATAAAAGCACAATAATACAAAATCCACAA-GATAACATATGGCACTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV574088       --> CCATATAAGCACAATAATACAAAATCCACAA-GATAACATATGGCACTAT  Raphanus raphanistrum subsp. landra
EX775250       --> CCATATAAGCACAATAATACAAAATCCACAA-GATAACATGTGGCACTAT  Raphanus raphanistrum subsp. landra
EY918970       --> CCATATAAGCACAATAATACAAAATCCACAA-GATAACATATGGCACTAT  Raphanus raphanistrum subsp. landra
EX761413       --> CCATAAAAGCACAATAATACAAAATCCACAA-GATAACATATGGCACTAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902043       --> ...............AATACAAAATCCACAA-GATAACATATGGCACTAT  Raphanus raphanistrum subsp. raphanistrum (MS)

               151    -    201
UN08447        --> ATCCTTTTCACTGATCTCCACGATACTATCAGTCTCTAGGTTTTATTATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971653       <-- ATCCTTTTCACTGATCTCCACGATACTATCAGTCTCTAGGTTTTATTATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX771155       <-- ATCCTTTTCACTAATCTCCACGATACTATCAGTCTCTAGGTTTTATTATA  Raphanus raphanistrum subsp. landra
EV569575       <-- ATCCTTTTCACTAATCTCCACGATACTATCAGTCTCTAGGTTT-ATTATA  Raphanus raphanistrum subsp. landra
EX757956       <-- ATCCTTTTCACTGATCTCCACGATACTATCAGTCTCTAGGTTTTATTATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905663       <-- ATCCTTTTCACTGATCTCCACGATACTATCAGTCTCTAGGTTTTATTATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755230       <-- ......TTCACTGATCTCCACGATACTATCAGTCTCTAGGTTTTATTATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759365       --> ATCCTTTTCACTGATCTCCACGATACTATCAGTCTCTAGGTTTTATTATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV574088       --> ATCCTTTTCACTAATCTCCACGATACTATCAGTCTCTAGGTTT-ATTATA  Raphanus raphanistrum subsp. landra
EX775250       --> ATCCTTTTCACTAATCTCCACGATACTATCAGTCTCTAGGTTTTATTATA  Raphanus raphanistrum subsp. landra
EY918970       --> ATCCTTTTCACTAATCTCCACGATACTATCAGTCTCTAGGTTTTATTATA  Raphanus raphanistrum subsp. landra
EX761413       --> ATCCTTTTCACTGATCTCCACGATACTATCAGTCTCTAGGTTTTATTATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902043       --> ATCCTTTTCACTGATCTCCACGATACTATCAGTCTCTAGGTTTTATTATA  Raphanus raphanistrum subsp. raphanistrum (MS)

               201    -    251
UN08447        --> CTCGGAATCTGGAGAAAAATGATACATAAAACATACTCTTAACACAGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971653       <-- CTCGGAATCTGGAGAAAAATGATACATAAAACATACTCTTAACACAGATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX771155       <-- CTCGGAATCTGGAGAAAAATGATACATAGAACATACTCTTAACACAGATT  Raphanus raphanistrum subsp. landra
EV569575       <-- CTCGGAATCTGGAGAAAAATGATACATAGAACATACTCTTAACACAGATT  Raphanus raphanistrum subsp. landra
EX757956       <-- CTCGGAATCTGGAGAAAAATGATACATAAAACATACTCTTAACACAGATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905663       <-- CTCGGAATCTGGAGAAAAATGATACATAAAACATACTCTTAACACAGATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755230       <-- CTCGGAATCTGGAGAAAAATGATACATAAAACATACTCTTAACACAGATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759365       --> CTCGGAATCTGGAGAAAAATGATACATAAAACATACTCTTAACACAGATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV574088       --> CTCGGAATCTGGAGAAAAATGATACATAGAACATACTCTTAACACAGATT  Raphanus raphanistrum subsp. landra
EX775250       --> CTCGGAATCTGGAGAAAAATGATACATAGAACATACTCTTAACACAGATT  Raphanus raphanistrum subsp. landra
EY918970       --> CTCGGAATCTGGAGAAAAATGATACATAGAACATACTCTTAACACAGATT  Raphanus raphanistrum subsp. landra
EX761413       --> CTCGGAATCTGGAGAAAAATGATACATAAAACATACTCTTAACACAGATT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902043       --> CTCGGAATCTGGAGAAAAATGATACATAAAACATACTCTTAACACAGATT  Raphanus raphanistrum subsp. raphanistrum (MS)

               251    -    301
UN08447        --> TCATTCAAACCGAAGGAGCATCGCGTAGGGCCTTGCTGAACTCGTCCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971653       <-- TCATTCAAACCGAAGGAGCATCGCGTAGGGCCTTGCTGAACTCGTCCCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX771155       <-- TCATTCAAACCGAAGGAGCATCGCGTAGGGCATTGCTGAACTCGTCCCTT  Raphanus raphanistrum subsp. landra
EV569575       <-- TCATTCAAACCGAAGGAGCATCGCGTAGGGCATTGCTGAACTCGTCCCTT  Raphanus raphanistrum subsp. landra
EX757956       <-- TCATTCAAACCGAAGGAGCATCGCGTAGGGCCTTGCTGAACTCGTCCCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905663       <-- TCATTCAAACCGAAGGAGCATCGCGTAGGGCCTTGCTGAACTCGTCCCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755230       <-- TCATTCAAACCGAAGGAGCATCGCGTAGGGCCTTGCTGAACTCGTCCCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759365       --> TCATTCAAACCGAAGGAGCATCGCGTAGGGCCTTGCTGAACTCGTCCCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV574088       --> TCATTCAAACCGAAGGAGCATCGCGTAGGGCATTGCTGAACTCGTCCCTT  Raphanus raphanistrum subsp. landra
EX775250       --> TCATTCAAACCGAAGGAGCATCGCGTAGGGCATTGCTGAACTCGTCCCTT  Raphanus raphanistrum subsp. landra
EY918970       --> TCATTCAAACCGAAGGAGCATCGCGTAGGGCATTGCTGAACTCGTCCCTT  Raphanus raphanistrum subsp. landra
EX761413       --> TCATTCAAACCGAAGGAGCATCGCGTAGGGCCTTGCTGAACTCGTCCCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902043       --> TCATTCAAACCGAAGGAGCATCGCGTAGGGCCTTGCTGAACTCGTCCCTT  Raphanus raphanistrum subsp. raphanistrum (MS)

               301    -    351
UN08447        --> CCCTTTCCTTGAGGATTCCTCTTCCATTCCATGATTTCTTTGAACGTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971653       <-- CCCTTTCCTTGAGGATTCCTCTTCCATTCCATGATTTCTTTGAACATCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX771155       <-- CCCTTTCCTTGAGGATTTCTCTTCCATTCCATGATTTCTTTGAACGTCTT  Raphanus raphanistrum subsp. landra
EV569575       <-- CCCTTTCCTTGAGGATTTCTCTTCCATTCCATGATTTCTTTGAACGTCTT  Raphanus raphanistrum subsp. landra
EX757956       <-- CCCTTTCCTTGAGGATTCCTCTTCCATTCCATGATTTCTTTGAACGTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905663       <-- CCCTTTCCTTGAGGATTCCTCTTCCATTCCATGATTTCTTTGAACGTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755230       <-- CCCTTTCCTTGAGGATTCCTCTTCCATTCCATGATTTCTTTGAACGTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759365       --> CCCTTTCCTTGAGGATTCCTCTTCCATTCCATGATTTCTTTGAACGTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EV574088       --> CCCTTTCCTTGAGGATTTCTCTTCCATTCCATGATTTCTTTGAACGTCTT  Raphanus raphanistrum subsp. landra
EX775250       --> CCCTTTCCTTGAGGATTTCTCTTCCATTCCATGATTTCTTTGAACGTCTT  Raphanus raphanistrum subsp. landra
EY918970       --> CCCTTTCCTTGAGGATTTCTCTTCCATTCCATGATTTCTTTGAACGTCTT  Raphanus raphanistrum subsp. landra
EX761413       --> CCCTTTCCTTGAGGATTCCTCTTCCATTCCATGATTTCTTTGAACGTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902043       --> CCCTTTCCTTGAGGATTCCTCTTCCATTCCATGATTTCTTTGAACGTCTT  Raphanus raphanistrum subsp. raphanistrum (MS)

               351    -    401
UN08447        --> TATGAATTCCTTCATGTGTAGTCGTTTCCATTCCTCAAAATCCCATTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971653       <-- TATGAATTCCTTCATGTGTAGTCGTTTCCATTCCTCAAAATCCCATTCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX771155       <-- TATGAATTCCTTCATGTGTAGGCGTCTCCATTCCTCAAAATCCCATTCTC  Raphanus raphanistrum subsp. landra
EV569575       <-- TATGAATTCCTTCATGTGTAGGCGTCTCCATTCCTCAAAATCCCATTCTC  Raphanus raphanistrum subsp. landra
EX757956       <-- TATGAATTCCTTCATGTGTAGTCGTTTCCATTCCTCAAAATCCCATTCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905663       <-- TATGAATTCCTTCATGTGTAGTCGTTTCCATTCCTCAAAATCCCATTCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755230       <-- TATGAATTCCTTCATGTGTAGTCGTTTCCATTCCTCAAAATCCCATTCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759365       --> TATGAATTCCTTCATGTGTAGTCGTTTCCATTCCTCAAAATCCCATTCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV574088       --> TATGAATTCCTTCATGTGTAGGCGTCTCCATTCCTCAAAATCCCATTCTC  Raphanus raphanistrum subsp. landra
EX775250       --> TATGAATTCCTTCATGTGTAGGCGTCTCCATTCCTCAAAATCCCATTCTC  Raphanus raphanistrum subsp. landra
EY918970       --> TATGAATTCCTTCATGTGTAGGCGTCTCCATTCCTCAAAATCCCATTCTC  Raphanus raphanistrum subsp. landra
EX761413       --> TATGAATTCCTTCATGTGTAGTCGTTTCCATTCCTCAAAATCCCATTCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902043       --> TATGAATTCCTTCATGTGTAGTCGTTTCCATTCCTCAAAATCCCATTCTC  Raphanus raphanistrum subsp. raphanistrum (MS)

               401    -    451
UN08447        --> CTCCGATATCAGGATCATCTTTATTGATCCATATATATGTTTTGACAGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971653       <-- CTCCAATATCAGGATCATCTTTATTGATCCATATATATGTTTTGACAGTC
EX771155       <-- CTCCGATATCAGGATCATCTTTATTGATCCATATATATGTTTTGACAGTC
EV569575       <-- CTCCGATATCAGGATCATCTTTATTGATCCATATATATGTTTTGACAGTC
EX757956       <-- CCCCGATATCAGGGTCATCTTTATTGGTCCATATATATGTTTTGACAGTC
EY905663       <-- CTCCAATATCAGGATCATCTTTATTGATCCATATATATGTTTTGACAGTC
EX755230       <-- CTCCAATATCAGGATCATCTTTATTGATCCATATATATGTTTTGACAGTC
EX759365       --> CTCCAATATCAGGATCATCTTTATTGATCCATATATATGTTTTGACAGTC
EV574088       --> CTCCGATATCAGGATCATCTTTATTGATCCATATATATGTTTTGACAGTC
EX775250       --> CTCCGATATCAGGATCATCTTTATTGATCCATATATATGTTTTGACAGTC
EY918970       --> CTCCGATATCAGGATCATCTTTATTGATCCATATATATGTTTTGACAGTC
EX761413       --> CCCCGATATCAGGATCATCTTTATTGATCCATATATATGTTTTGACAGTC
EY902043       --> CTCCAATATCAGGATCATCTTTATTGATCCATATATATGTTTTGACAGTC

               451    -    501
UN08447        --> ATCTTCTCAGAGTTGTCCTCTCGTACGACACCAACTGTCACTCTCTCATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971653       <-- ATCTTCTCAGAGTTGTCCTCTCGTACGACACCAACTGTCACTCTCTCATA
EX771155       <-- ATCTTCTCAGAGTTGTCCTCTCGTACGACACCAACTGTCACTCTCTCATA
EV569575       <-- ATCTTCTCAGAGTTGTCCTCTCGTACGACACCAACTGTCACTCTCTCATA
EX757956       <-- ATCTTCTCAGAGTTGTCCTCTCGTACGACACCAACTGTCACTCTCTCATA
EY905663       <-- ATCTTCTCAGAGTTGTCCTCTCGTACGACACCAACTGTCACTCTCTCATA
EX755230       <-- ATCTTCTCAGAGTTGTCCTCTCGTACGACACCAACTGTCACTCTCTCATA
EX759365       --> ATCTTCTCAGAGTTGTCCTCTCGTACGACACCAACTGTCACTCTCTCATA
EV574088       --> ATCTTCTCAGAGTTGTCCTCTCGTACGACACCAACTGTCACTCTCTCATA
EX775250       --> ATCTTCTCAGAGTTGTCCTCTCGTACGACACCAACTGTCACTCTCTCATA
EY918970       --> ATCTTCTCAGAGTTGTCCTCTCGTACGACACCAACTGTCACTCTCTCATA
EX761413       --> ATCTTCTCAGAGTTGTCCTCTCGTACGACACCAACTGTCACTCTCTCATA
EY902043       --> ATCTTCTCAGAGTTGTCCTCTCGTACGACACCAACTGTCACTCTCTCATA

               501    -    551
UN08447        --> TTCATTACCCTCAACAGTATCTAAATGCCCAAGTTCTTCATCCGTTAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971653       <-- TTCATTACCCTCAACAGTATCTAAATGCCCAAGTTCTTCATCCGTTAATC
EX771155       <-- TTCATTACCCTCAACAGTATCTAAATGCCCAAGTTCTTCATCCGTTAATC
EV569575       <-- TTCATTACCCTCAACAGTATCTAAATGCCCAAGTTCTTCATCCGTTAATC
EX757956       <-- TTCATTACCCTCAACAGTATCTAAATGCCCAAGTTCTTCATCCGTTAATC
EY905663       <-- TTCATTACCCTCAACAGTATCTAAATGCCCAAGTTCTTCATCCGTTAATC
EX755230       <-- TTCATTACCCTCAACAGTATCTAAATGCCCAAGTTCTTCATCCGTTAATC
EX759365       --> TTCATTACCCTCAACAGTATCTAAATGCCCAAGTTCTTCATCCGTTAATC
EV574088       --> TTCATTACCCTCAACAGTATCTAAATGCCCAAGTTCTTCATCCGTTAATC
EX775250       --> TTCATTACCCTCAACAGTATCTAAATGCCCAAGTTCTTCATCCGTTAATC
EY918970       --> TTCATTACCCTCAACAGTATCTAAATGCCCAAGTTCTTCATCCGTTAATC
EX761413       --> TTCATTACCCTCAACAGTATCTAAATGCCCAAGTTCTTCATCCGTTAATC
EY902043       --> TTCATTACCCTCAACAGTATCTAAATGCCCAAGTTCTTCATCCGTTAATC

               551    -    601
UN08447        --> CCATTAGTAACTTTCCATGAACTTCTCCATCTTCAGACGGTATAACACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971653       <-- CCATTAGTAACTTTCCATGAACTTCTCCATCTTCAAACGGTATAACACAT
EX771155       <-- CCATTAGTAACTTTCCATGAACTTCTCCATCTTCAGACGGTGTAACACAT
EV569575       <-- CCATTAGTAACTTTCCATGAACTTCTCCATCTTCAGACGGTATAACACAT
EX757956       <-- CCATTAGTAACTTTCCATGAGCTTCTCCATCTTCAGACGGT.........
EY905663       <-- CCATTAGTAACTTTCCATGAACTTCTCCATCTTCAAACGGTATAACACAT
EX755230       <-- CCATTAGTAACTTTCCATGAACTTCTCCATCTTCAAACGGTATAACACAT
EX759365       --> CCATTAGTAACTTTCCATGAACTTCTCCATCTTCAAACGGTATAACACAT
EV574088       --> CCATTAGTAACTTTCCATGAACTTCTCCATCTTCAGACGGTATAACACAT
EX775250       --> CCATTAGTAACTTTCCATGAACTTCTCCATCTTCAGACGGTGTAACACAT
EY918970       --> CCATTAGTAACTTTCCATGAACTTCTCCATCTTCAGACGGTATAACACAT
EX761413       --> CCATTAGTAACTTTCCATGAACTTCTCCATCTTCAGACGGTATAACACAT
EY902043       --> CCATTAGTAACTTTCCATGAACTTCTCCATCTTCAAACGGTATAACACAT

               601    -    651
UN08447        --> GGATACAAACGTCCTTTAAGCCTAAACCTCTTAAAGCCAGGGAGTGTTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971653       <-- GGATACAAACGTCCTTTAAGCCTAAACCTCTTAAAGCCAGGGAGTGTTAC
EX771155       <-- GGATACAAACGTCCTTTAAGCCTAAACCTCTTAAAGCCAGGGAGCGTTAC
EV569575       <-- GGATACAAACGTCCTTTAAGCCTAAACCTCTTAAAGCCAGGGAGTGTTAC
EX757956       <-- ..................................................
EY905663       <-- GGATACAAACGTCCTTTAAGCCTAAACCTCTTAAAGCCAGGGAGTGTTAC
EX755230       <-- GGATACAAACGTCCTTTAAGCCTAAACCTCTTAAAGCCAGGGAGTGTTAC
EX759365       --> GGATACAAACGTCCTTTAAGCCTAAACCTCTTAAAGCCAGGGAGTGTTAC
EV574088       --> GGATACAAACGTCCTTTAAGCCTAAACCTCTTAAAGCCAGGGAGTGTTAC
EX775250       --> GGATACAAACGTCCTTTAAGCCTAAACCTCTTAAAGCCAGGGAGCGTTAC
EY918970       --> GGATACAAACGTCCTTTAAGCCTAAACCTCTTAAAGCCAGGGAGTGTTAC
EX761413       --> GGATACAAACGTCCTTTAAGCCTAAACCTCTTAAAGCCAGGGAGTGTTAC
EY902043       --> GGATACAAACGTCCTTTAAGCCTAAACCTCTTAAAGCCAGGGAGTGTTAC

               651    -    701
UN08447        --> AGAGATGATTTCAGGAGTACGATCAAGCATGACCTTGGCGACCTCAGGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971653       <-- AGAGATGATTTCAGGAGTACGATCAAGCATGACCTTGGCGACCTCAGGCT
EX771155       <-- AGAGATGATTTCAGGAGTACGATCAAGCATGACCTTGGCGACCTCAGGCT
EV569575       <-- AGAGATGATTTCAGGAGTACGATCAAGCATGACCTTGGCGACCTCAGGCT
EX757956       <-- ..................................................
EY905663       <-- AGAGATGATTTCAGGAGTACGATCAAGCATGACCTTGGCGACCTCAGACT
EX755230       <-- AGAGATGATTTCAGGAGTACGATCAAGCATGACCTTGGCGACCTCAGGCT
EX759365       --> AGAGATGATTTCAGGAGTACGATCAAGCATGACCTTGGCGACCTCAGGCT
EV574088       --> AGAGATGATTTCAGGAGTACGATCAAGCATGACCTTGGCGACCTCAGGCT
EX775250       --> AGAGATGATTTCAGGAGTACGATCAAGCATGACCTTGGCGACCTCAGGCT
EY918970       --> AGAGATGATTTCAGGAGTACGATCAAGCATGACCTTGGCGACCTCAGGCT
EX761413       --> AGAGATGATTTCAGGAGTACGATCAAGCATGACCTTGGCGACCTCAGGCT
EY902043       --> AGAGATGATTTCAGGAGTACGATCAAGCATGACCTTGGCGACCTCAGACT

               701    -    751
UN08447        --> CCTGAAAGCTACCATAGACGAAAACATTGTGAAGCTGCGCACCCGAGCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971653       <-- CCTGAAAGCTACCATAGACGAAAACATTGTGAAGCTGCGCACCCGAGCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX771155       <-- CTTGAAAGCTACCATAGACGAAAACATTGTGAAGCTGTGCACCCGAGCCA  Raphanus raphanistrum subsp. landra
EV569575       <-- CTTGAAAGCTACCATAGACGAAAACATTcc....................  Raphanus raphanistrum subsp. landra
EX757956       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY905663       <-- CCTGAAAGCTACCATAGACc..............................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX755230       <-- CCTGAAAGCTACCATAGACGAAAACATTGTGAAGTTGCGCACCCGAGCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX759365       --> CCTGAAAGCTACCATAGACGAAAACATTGTGAAGTTGCGCACCCGAGCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EV574088       --> CTTGAAAGCTACCATA..................................  Raphanus raphanistrum subsp. landra
EX775250       --> CTTGAAAGCTACCATAGACGAAAACATTGTGAAGCTGTGCACCCGAGCCA  Raphanus raphanistrum subsp. landra
EY918970       --> CTTGAAAGC.........................................  Raphanus raphanistrum subsp. landra
EX761413       --> CCTGAAAGCTACCATAGACGAAAACATTGTGAAGCTGCGCACCAGATCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902043       --> CCTGAAAGCTACCATAGACc..............................  Raphanus raphanistrum subsp. raphanistrum (MS)

               751    -    801
UN08447        --> CTCATTTTTATTTTCTCTTCAGTTTTTTTTTTTTCTGCTTTATTTGCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD971653       <-- CTCATTTTTATTTTCTCTTCAGTTTTTTTTTTT-CTGCTTTATTTcc...
EX771155       <-- CTCATTTTTATTTTCTCTTCAGTTTTTTTTTTgctttatttcc.......
EV569575       <-- ..................................................
EX757956       <-- ..................................................
EY905663       <-- ..................................................
EX755230       <-- CTCATTTTTATTTTCTCTTCAGTTTTTTTTTTTTCTGCTTTATTTGCTTG
EX759365       --> CTCATTTTTATTTTCTCTTCAGT...........................
EV574088       --> ..................................................
EX775250       --> CTCATTTTTATTTTCTCTTCAGTTTTTTTTTgctttatttcc........
EY918970       --> ..................................................
EX761413       --> CTCATTTTTATTTTCTCTTCAGTTTT........................
EY902043       --> ..................................................

               801    -    851
UN08447        --> TCC
                   ~~~
FD971653       <-- ...
EX771155       <-- ...
EV569575       <-- ...
EX757956       <-- ...
EY905663       <-- ...
EX755230       <-- TCC
EX759365       --> ...
EV574088       --> ...
EX775250       --> ...
EY918970       --> ...
EX761413       --> ...
EY902043       --> ...