1      -     51
UN08464        --> GGACATCACAAAAACATCAACAAAATTAAAAGAGGATAAAATGGCGAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW730151       <-- GGACATCACAAAAACATCAACAAAATTAAAAGAGGATAAAATGGCGAGCA  Raphanus sativus cv Early Scarlet Globe
EX900157       <-- GGACATCACAAAAACATCAACAAAATTAAAAGAGGATAAAATGGCGAGCA  Raphanus sativus cv Early Scarlet Globe
EY909278       <-- GGACATCACAAAAACATCAACAAAATTAAAAGAGGATAAAATGGCGAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY910900       <-- GGACATCACAAAAACATCAACAAAATTAAAAGAGGATAAAATGGCGAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY920895       <-- GGACATCACAAAAACATCAACAAAATTAAAAGAGGATAAGATGGCGAGCA  Raphanus raphanistrum subsp. landra
EY942890       <-- GGACATCACAAAAACATCAACAAAATTAAAAGAGGATAAAATGGCGAGCA  Raphanus sativus cv Rat-Tail Radish #3870
FD538708       <-- GGACATCACAAAAACATCAACAAAATTAAAAGAGGATAAGATGGCGAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD985215       <-- GGACATCACAAAAACATCAACAAAATTAAAAGAGGATAAGATGGCGAGCA  Raphanus raphanistrum subsp. landra
FD546506       <-- ..ggATCACAAAAACATCAACAAAATTAAAAGAGGATAAAATGGCGAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW724824       --> GGACATCACAAAAACATCAACAAAATTAAAAGAGGATAAAATGGCGAGCA  Raphanus sativus cv Early Scarlet Globe
EX896197       --> GGACATCACAAAAACATCAACAAAATTAAAAGAGGATAAAATGGCGAGCA  Raphanus sativus cv Early Scarlet Globe
EY912958       --> GGACATCACAAAAACATCAACAAAATTAAAAGAGGATAAAATGGCGAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914962       --> GGACATCACAAAAACATCAACAAAATTAAAAGAGGATAAAATGGCGAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY946880       --> GGACATCACAAAAACATCAACAAAATTAAAAGAGGATAAAATGGCGAGCA  Raphanus sativus cv Rat-Tail Radish #3870
FD542709       --> GGACATCACAAAAACATCAACAAAATTAAAAGAGGATAAGATGGCGAGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD989438       --> GGACATCACAAAAACATCAACAAAATTAAAAGAGGATAAGATGGCGAGCA  Raphanus raphanistrum subsp. landra
FD550566       --> ..ggATCACAAAAACATCAACAAAATTAAAAGAGGATAAAATGGCGAGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD940794       --> ..ggATCACAAAAACATCAACAAAATTAAAAGAGGATAAGATGGCGAGCA  Raphanus sativus var. oleiformis
FD949077       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               51     -    101
UN08464        --> AGAAGGTGGGAGTGATGGTGATGATGATAGTGGTGGTGATGGCTATTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW730151       <-- AGAAGGTGGGAGTGATGGTGATGATGATAGTGGTGGTGATGGCTATTTTA
EX900157       <-- AGAAGGTGGGAGTGATGGTGATGATGATAGTGGTGGTGATGGCTATTTTA
EY909278       <-- AGAATGTGGGAGTGATGGTGATGATGATAGTGGTGGTGATGGCTATTTTA
EY910900       <-- AGAAGGTGGGAGTGATGGTGATGATGATAGTGGTGGTGATGGCTATTTTA
EY920895       <-- AGAAGGTGGGAGTGATGGTGATGATGATAGTGGTGGTGATGGCTATTTTA
EY942890       <-- AGAAGGTGGGAGTGATGGTGATGATGATAGTGGTGGTGATGGCTATTTTA
FD538708       <-- AGAAGGTGGGAGTGATGGTGATGATGATAGTGGTGGTTATGGCTATTTTA
FD985215       <-- AGAAGGTGGGAGTGATGGTGATGATGACAGTGGTGGTGATGGCTATTTTA
FD546506       <-- AGAAGGTGGGAGTGATGGTGATGATGATAGTGGTGGTGATGGCTATTTTA
EW724824       --> AGAAGGTGGGAGTGATGGTGATGATGATAGTGGTGGTGATGGCTATTTTA
EX896197       --> AGAAGGTGGGAGTGATGGTGATGATGATAGTGGTGGTGATGGCTATTTTA
EY912958       --> AGAATGTGGGAGTGATGGTGATGATGATAGTGGTGGTGATGGCTATTTTA
EY914962       --> AGAAGGTGGGAGTGATGGTGATGATGATAGTGGTGGTGATGGCTATTTTA
EY946880       --> AGAAGGTGGGAGTGATGGTGATGATGATAGTGGTGGTGATGGCTATTTTA
FD542709       --> AGAAGGTGGGAGTGATGGTGATGATGATAGTGGTGGTTATGGCTATTTTA
FD989438       --> AGAAGGTGGGAGTGATGGTGATGATGACAGTGGTGGTGATGGCTATTTTA
FD550566       --> AGAAGGTGGGAGTGATGGTGATGATGATAGTGGTGGTGATGGCTATTTTA
FD940794       --> AGAAGGTGGGAGTGATGGTGATGATGATAGTGGTGGTGATGGCTATTTTA
FD949077       --> ..................................................

               101    -    151
UN08464        --> GCGGAGAGGTCAGTGGCGATTGATATCTGTGGCATGACCCAGTCAGAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW730151       <-- GCGGAGAGGTCAGTGGCGATTGATATCTGTGGCATGACCCAGTCAGAGTT
EX900157       <-- GCGGAGAGGTCAGTGGCGATTGATATCTGTGGCATGACCCAGTCAGAGTT
EY909278       <-- GCGGAGAGGTCAGTGGCGATTGATATCTGTGGCATGACCCAGTCAGAGTT
EY910900       <-- GCGGAGAGGTCAGTGGCGATTGATATCTGTGACATGACCCAGTCAGAGTT
EY920895       <-- GCGGAGAGGTCAGTGGCGATTGATATCTGTGGCATGACCCAGTCAGAGTT
EY942890       <-- GCGGAGAGGTCAGTGGCGATTGATATCTGTGGCATGACCCAGTCAGAGTT
FD538708       <-- GCGGAGAGGTCAGTGGCGATTGATATCTGTGGCATGACCCAGTCAGAGTT
FD985215       <-- GCGGAGAGGTCAGTGGCGATTGATATCTGTGGCATGACCCAGTCAGAGTT
FD546506       <-- GCGGAGAGGTCAGTGGCGATTGATATCTGTGGCATGACCCAGTCAGAGTT
EW724824       --> GCGGAGAGGTCAGTGGCGATTGATATCTGTGGCATGACCCAATCAGAGTT
EX896197       --> GCGGAGAGGTCAGTGGCGATTGATATCTGTGGCATGACCCAGTCAGAGTT
EY912958       --> GCGGAGAGGTCAGTGGCGATTGATATCTGTGGCATGACCCAGTCAGAGTT
EY914962       --> GCGGAGAGGTCAGTGGCGATTGATATCTGTGACATGACCCAGTCAGAGTT
EY946880       --> GCGGAGAGGTCAGTGGCGATTGATATCTGTGGCATGACCCAGTCAGAGTT
FD542709       --> GCGGAGAGGTCAGTGGCGATTGATATCTGTGGCATGACCCAGTCAGAGTT
FD989438       --> GCGGAGAGGTCAGTGGCGATTGATATCTGTGGCATGACCCAGTCAGAGTT
FD550566       --> GCGGAGAGGTCAGTGGCGATTGATATCTGTGGCATGACCCAGTCAGAGTT
FD940794       --> GCGGAGAGGTCAGTGGCGATTGATATCTGTGGCATGACCCAGTCAGAGTT
FD949077       --> ..................................................

               151    -    201
UN08464        --> GAATGAGTGCAAACCAGCGGTGAGCAAGGAGAATCCGACGAACCCGTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW730151       <-- GAATGAGTGCAAACCAGCGGTGAGCAAGGAGAATCCGACGAACCCGTCAA  Raphanus sativus cv Early Scarlet Globe
EX900157       <-- GAATGAGTGCAAACCAGCGGTGAGCAAGGAGAATCCGACGAACCCGTCAA  Raphanus sativus cv Early Scarlet Globe
EY909278       <-- GAATGAGTGCAAACCAGCGGTGAGCAAGGAGAATCCGACGAACCCGTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY910900       <-- GAATGAGTGCAAACCAGCGGTGAGCAAGGAGAATCCGACGAACCCGTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY920895       <-- GAATGAGTGCAAACCAGCGGTGAGCAAGGGGAATCCGACGAACCCATCAA  Raphanus raphanistrum subsp. landra
EY942890       <-- GAATGAGTGCAAACCAGCGGTGAGCAAGGAGAATCCGACGAACCCGTCAA  Raphanus sativus cv Rat-Tail Radish #3870
FD538708       <-- GAATGAGTGCAAACCAGCGGTGAGCAAGGAGAATCCGACGAACCCATCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD985215       <-- GAATGAGTGCAAACCAGCGGTGAGCAAGGAGAATCCGACGAACCCATCAA  Raphanus raphanistrum subsp. landra
FD546506       <-- GAATGAGTGCAAACCAGCGGTGAGCAAGGAGAATCCGACGAACCCGTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW724824       --> GAATGAGTGCAAACCAGCGGTGAGCAAGGAGAATCCGACCAACCCGTCAA  Raphanus sativus cv Early Scarlet Globe
EX896197       --> GAATGAGTGCAAACCAGCGGTGAGCAAGGAGAATCCGACGAACCCGTCAA  Raphanus sativus cv Early Scarlet Globe
EY912958       --> GAATGAGTGCAAACCAGCGGTGAGCAAGGAGAATCCGACGAACCCGTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914962       --> GAATGAGTGCAAACCAGCGGTGAGCAAGGAGAATCCGACGAACCCGTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY946880       --> GAATGAGTGCAAACCAGCGGTGAGCAAGGAGAATCCGACGAACCCGTCAA  Raphanus sativus cv Rat-Tail Radish #3870
FD542709       --> GAATGAGTGCAAACCAGCGGTGAGCAAGGAGAATCCGACGAACCCATCAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD989438       --> GAATGAGTGCAAACCAGCGGTGAGCAAGGAGAATCCGACGAACCCATCAA  Raphanus raphanistrum subsp. landra
FD550566       --> GAATGAGTGCAAACCAGCGGTGAGCAAGGAGAATCCGACGAACCCGTCAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD940794       --> GAATGAGTGCAAACCAGCGGTGAGCAAGGAGAATCCGACGAACCCATCAA  Raphanus sativus var. oleiformis
FD949077       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               201    -    251
UN08464        --> CGCTCTGCTGCGACTATCTAAAACACGCTGACTACAGCTGTCTTTGCGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW730151       <-- CGCTCTGCTGCGACTATTTAAAACACGCTGACTACAGCTGTCTTTGCGGC  Raphanus sativus cv Early Scarlet Globe
EX900157       <-- CGCTCTGCTGCGACTATCTAAAACACGCTGACTACAGCTGTCTTTGCGGC  Raphanus sativus cv Early Scarlet Globe
EY909278       <-- CGTTCTGCTGCGACTATTTAAAACACGCTGACTACAGCTGTCTTTGCGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY910900       <-- CGCTCTGCTGCGACTATCTAAAACACGCTGACTACAGCTGTCTTTGCGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY920895       <-- CGCTTTGCTGCG......................................  Raphanus raphanistrum subsp. landra
EY942890       <-- C.................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD538708       <-- CGCTTTGCTGCGACTATCTGAAACACGCTGACTACAGCTGTCTTTGCGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD985215       <-- CGCTTTGCTGCGACTATCTGAAACACGCTGACTACAGCTGTCTTTGCGGC  Raphanus raphanistrum subsp. landra
FD546506       <-- CGTTCTGCTGCGACTATTTAAAACACGCTGACTACAGCTGTCTTTGCGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW724824       --> CGCTCTGCTGCGACTATCTAAAACACGCTGACTACAGCTGTCTTTGCGGC  Raphanus sativus cv Early Scarlet Globe
EX896197       --> CGCTCTGCTGCGACTATCTAAAACACGCTGACTACAGCTGTCTTTGCGGC  Raphanus sativus cv Early Scarlet Globe
EY912958       --> CGCTCTGCTGCGACTATCTAAAACACGCTGACTACAGCTGTCTTTGCGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914962       --> CGCTCTGCTGCGACTATCTAAAACACGCTGACTACAGCTGTCTTTGCGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY946880       --> CGCTCTGCTGCGACTATCTAAAACACGCTGACTACAGCTGTCTTTGCGGC  Raphanus sativus cv Rat-Tail Radish #3870
FD542709       --> CGCTTTGCTGCGACTATCTGAAACACGCTGACTACAGCTGTCTTTGCGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD989438       --> CGCTTTGCTGCGACTATCTGAAACACGCTGACTACAGCTGTCTTTGCGGC  Raphanus raphanistrum subsp. landra
FD550566       --> CGCTCTGCTGCGACTATCTAAAACACGCTGACTACAGCTGTCTTTGCGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD940794       --> CGCTTTGCTGCGACTATCTGAAACACGCTGACTACAGCTGTCTTTGCGGC  Raphanus sativus var. oleiformis
FD949077       --> ...........................ggGACTACAGCTGTCTTTGCGGC  Raphanus sativus cv Early Scarlet Globe

               251    -    301
UN08464        --> TACAAGAACTCTCCATTGCTCGGTTATTACGGTATTGATCCGGCGCTCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW730151       <-- TACAAGAACTCTCCATTGCTCGGTTATTACGGTATTGATCCGGCGCTCGC
EX900157       <-- TACAAGAACTCTCCATTGCTCGGTTATTACGGTATTGATCCGGCGCTCGC
EY909278       <-- TACAAGAACTCTCCATTGCTCGGTTATTACGGTATTGATCCGGCGCTCGC
EY910900       <-- TACAAGAACTCTCCATTGCTCGGTTATTACGGTATTGATCCGGCGCTCGC
EY920895       <-- ..................................................
EY942890       <-- ..................................................
FD538708       <-- TACAAGAACTCTCCATTGCTCGGTTATTACGGTATTGATCCGGCGCTCGC
FD985215       <-- TACAAGAACTCTCCATTGCTCGGTTATTACGGTATTGATCCGGCGCTCGC
FD546506       <-- TACAAGAACTCTCCATTGCTCGGTTATTACGGTATTGATCCGGCGCTCGC
EW724824       --> ..................................................
EX896197       --> TACAAGAACTCTCCATTGCTCGGTTATTACGGTATTGATCCGGCGCTCGC
EY912958       --> TACAAGAACTCTCCATTGCTCGGTTATTACGGTATTGATCCGGCGCTCGC
EY914962       --> TACAAGAACTCTCCATTGCTCGGTTATTACGGTATTGATCCGGCGCTCGC
EY946880       --> TACAAGAACTCTCCATTGCTCGGTTATTACGGTATTGATCCGGCGCTCGC
FD542709       --> TACAAGAACTCTCCATTGCTCGGTTATTACGGTATTGATCCGGCGCTCGC
FD989438       --> TACAAGAACTCTCCATTGCTCGGTTATTACGGTATTGATCCGGCGCTCGC
FD550566       --> TACAAGAACTCTCCATTGCTCGGTTATTACGGTATTGATCCGGCGCTCGC
FD940794       --> TACAAGAACTCTCCATTGCTCGGTTATTACGGTATTGATCCGGCGCTCGC
FD949077       --> TACAAGAACTCTCCATTGCTCGGTTATTACGGTATTGATCCGGCGCTCGC

               301    -    351
UN08464        --> TGCTGGACTCCCAAGCAAATGTAACATGCCCAACGCTCCAACTTGTTAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW730151       <-- TGCTGGACTCCCAAGCAAATGTAACATGCCCAACGCTCCAACTTGTTAAG
EX900157       <-- TGCTGGACTCCCAAGCAAATGTAACATGCCCAACGCTCCAACTTGTTAAG
EY909278       <-- TGCTGGACTCCCAAGCAAATGTAACATGCCCAACGCTCCAACTTGTTAAG
EY910900       <-- TGCTGGACTCCCAAGCAAATGTAACATGCCCAACGCTCCAACTTGTTAAG
EY920895       <-- ..................................................
EY942890       <-- ..................................................
FD538708       <-- TGCTGGACTCCCAAGCAAATGTAACATGCCCAACGCTCCAACTTGTTAAG
FD985215       <-- TGCTGGACTCCCAAGCAAATGTAACATGCCCAACGCTCCAACTTGTTAAG
FD546506       <-- TGCTGGACTCCCAAGCAAATGTAACATGCCCAACGCTCCAACTTGTTAAG
EW724824       --> ..................................................
EX896197       --> TGCTGGACTCCCAAGCAAATGTAACATGCCCAACGCTCCAACTTGTTAAG
EY912958       --> TGCTGGACTCCCAAGCAAATGTAACATGCCCAACGCTCCAACTTGTTAAG
EY914962       --> TGCTGGACTCCCAAGCAAATGTAACATGCCCAACGCTCCAACTTGTTAAG
EY946880       --> TACTGGACTCCCAAGCAAATGTAACATGCCCAACGCTCCAACTTGTTAAG
FD542709       --> TGCTGGACTCCCAAGCAAATGTAACATGCCCAACGCTCCAACTTGTTAAG
FD989438       --> TGCTGGACTCCCAAGCAAATGTAACATGCCCAACGCTCCAACTTGTTAAG
FD550566       --> TGCTGGACTCCCAAGCAAATGTAACATGCCCAACGCTCCAACTTGTTAAG
FD940794       --> TGCTGGACTCCCAAGCAAATGTAACATGCCCAACGCTCCAACTTGTTAAG
FD949077       --> TGCTGGACTCCCAAGCAAATGTAACATGCCCAACGCTCCAACTTGTTAAG

               351    -    401
UN08464        --> CTTTATGTGTGTGCTTTTGTCTTTGTCTAACAATCATGTGTTAATGTATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW730151       <-- CTTTATGTGTGTGCTTTTGTCTTTGTCTAACAATTATGTGTTAATGTATT  Raphanus sativus cv Early Scarlet Globe
EX900157       <-- CTTTATGTGTGTGCTTTTGTCTTT..........................  Raphanus sativus cv Early Scarlet Globe
EY909278       <-- CTTTATGTGTGTGCTTTTGTCTTTGTCTAACAATCATGTGTTAATGTATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY910900       <-- CTTTATGTGTGTGCTTTTGTCTTTGTCTAACAATCATGTGTTAATGTATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY920895       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY942890       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD538708       <-- CTTTATGTGTGTGCTTTTGTCTTTGTCTAACAATCATGTGTTAATGTATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD985215       <-- CTCTATGTGTGTGCTTT------TGTCTAACAATCATGTGTTAATGTTTT  Raphanus raphanistrum subsp. landra
FD546506       <-- CTTTATGTGTGTGCTTTTGTCTTTGTCTAACAATCATGTGTTAATGTATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW724824       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX896197       --> CTTTATGTGTGTGCTTTTGTCTTTGTCTAACAATTATGTGTTAATGTATT  Raphanus sativus cv Early Scarlet Globe
EY912958       --> CTTTATGTGTGTGCTTTTGTCTTTGTCTAACAATCATGTGTTAATGTATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914962       --> CTTTATGTGTGTGCTTTTGTCTTTGTCTAACAATCATGTGTTAATGTATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY946880       --> CTTTATGTGTGTGCTTTTGTCTTTGTCTAACAATTATGTGTTAATGTATT  Raphanus sativus cv Rat-Tail Radish #3870
FD542709       --> CTTTATGTGTGTGCTTTTGTCTTTGTCTAACAATCATGTGTTAATGTATT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD989438       --> CTCTATGTGTGTGCTTTTGTCT------AACAATCATGTGTTAATGTTTT  Raphanus raphanistrum subsp. landra
FD550566       --> CTTTATGTGTGTGCTTTTGTCTTTGTCTAACAATCATGTGTTAATGTATT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD940794       --> CTCTATGTGTGTGCTTTTGTCT------AACAATCATGTGTTAATGTTTT  Raphanus sativus var. oleiformis
FD949077       --> CTTTATGTGTGTGCTTTTGTCTTTGTCTAACAATTATGTGTTAATGTATT  Raphanus sativus cv Early Scarlet Globe

               401    -    451
UN08464        --> TCCATAAAAGTTCTCACCAATGGCGTTTATTGGTGTAAAACCCAAAGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW730151       <-- TCCATAAAAGTTCTCACCAATGGCGTTTATTGATGTAAAACCCAAAGGAA
EX900157       <-- ..................................................
EY909278       <-- TCCATAAAAGTTCTCACC................................
EY910900       <-- TCCATAAAAGTTCTCACCAATGGCGTTTATTGGTGTAAAACCC.......
EY920895       <-- ..................................................
EY942890       <-- ..................................................
FD538708       <-- TCCATAAAAGTTCTCACCAATGGCGTTTATTGGTGTAAAACCC.......
FD985215       <-- TCCATAAAAGTTCTCACCAATGGCGTTTATTGGTGTAAAACCC.......
FD546506       <-- TCCATAAAAGTTCTCACCAATGGCGTTTATTGGTGTAAAACCC.......
EW724824       --> ..................................................
EX896197       --> TCCATAAAAGTTCTCACC................................
EY912958       --> TCCATAAAAGTTCTCACC................................
EY914962       --> TCCATAAAAGTTCTCACCAATGGCGTTTATTGGTGTAAAACCC.......
EY946880       --> TCCATAAAAGTTCTCACCAATGGCGTTTATTGATGTAAAACCCAAAGGAA
FD542709       --> TCCATAAAAGTTCTCACCAATGGCGTTTATTGGTGTAAAACCC.......
FD989438       --> TCCATAAAAGTTCTCACCAATGGCGTTTATTGGTGTAAAACCC.......
FD550566       --> TCCATAAAAGTTCTCACCAATGGCGTTTATTGGTGTAAAACCC.......
FD940794       --> TCCATAAAAGTTCTCACCAATGGCGTTTATTGGTGTAAAACCC.......
FD949077       --> TCCAT.............................................

               451    -    501
UN08464        --> TGCTT
                   ~~~~~
EW730151       <-- TGCTT
EX900157       <-- .....
EY909278       <-- .....
EY910900       <-- .....
EY920895       <-- .....
EY942890       <-- .....
FD538708       <-- .....
FD985215       <-- .....
FD546506       <-- .....
EW724824       --> .....
EX896197       --> .....
EY912958       --> .....
EY914962       --> .....
EY946880       --> TGCTT
FD542709       --> .....
FD989438       --> .....
FD550566       --> .....
FD940794       --> .....
FD949077       --> .....