Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN08506

               -2     -     48
UN08506        --> ...GGGATTCTGAAACTCTTATCCTTCTGCAAACAGAGCAGAACAGTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX777319       <-- ................................................gg
EV572529       <-- ..................................................
FD565959       <-- ..................................................
FD553350       <-- ..................................................
EW729684       <-- ..................................................
FD565881       <-- ..................................................
EX776985       <-- ..................................................
EY921038       <-- ..................................................
EV567627       --> ...GGGATTCTGAAACTCTTATCCTTCTGCAAACAGAGCAGAACAGTCTC
EV569616       --> ...GGGATTCTGAAACTCTTATCCTTCTGCAAACAGAGCAGAACAGTCTC
FD557185       --> ....GGATTCTGAAACTCTTATCCTTCTGCAAACAGAGCAGAACAGTCTC
FD561830       --> ....GGATTCTGAAACTCTTATCCTTCTGCAAACAGAGCAGAACAGTCTC
FD561932       --> ....GGATTCTGAAACTCTTATCCTTCTGCAAACAGAGCAGAACAGTCTC
EY925589       --> ggatcGATTCTGAAACTCTTATCCTTCTGCAAACAGAGCAGAACAGTCTC
FY434883       --> ..................................................
EX773523       --> ..................................................

               48     -     98
UN08506        --> ACGATGGCTACCACGTCATGTTATGTCTCCGTCTCATTCCTCCGTCAACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX777319       <-- ACGATGGCTACCACGTCATGTTATGTCTCCGTCTCATTCCTCCGTCAACT
EV572529       <-- ..........................CTCCGTCTCATTCCTCCGTCAACC
FD565959       <-- ..................................................
FD553350       <-- ..................................................
EW729684       <-- ..................................................
FD565881       <-- ..................................................
EX776985       <-- ..................................................
EY921038       <-- ..................................................
EV567627       --> ACGATGGCTACCACGTCATGTTATGTCTCCGTCTCATTCCTCCGTCAACC
EV569616       --> ACGATGGCTACCACGTCATGTTATGTCTCCGTCTCATTCCTCCGTCAACT
FD557185       --> ACGATGGCTACCACGTCATGTTATGTCTCCGTCTCATTCCTCCGTCAACT
FD561830       --> ACGATGGCTACCACGTCATGTTATGTCTCCGTCTCATTCCTCCGTCAACT
FD561932       --> ACGATGGCTACCACGTCATGTTATGTCTCCGTCTCATTCCTCCGTCAACT
EY925589       --> ACGATGGCTACCACGTCATGTTATGTCTCCGTCTCATTCCTCCGTCAACT
FY434883       --> ................cgTGTTATGTCTCCGTCTCATTCCTCCGTCAACT
EX773523       --> ..........................CTCCGTCTCATTCCTCCGTCAACT

               98     -    148
UN08506        --> TCCTCCTTGCACCACGGTTCAGTTCTTCGGTTTCTCACCGACCCAGCGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX777319       <-- TCCTCCTTGCACCACGGTTCAGTTCTTCGGTTTCTCACCGACCCAGCGTA
EV572529       <-- TCCTCCTTGCACCACGGTTCAGTTCTTCGGTTTCTCACCGACCCAGCGTA
FD565959       <-- ........GCACCACTGTTCAGTTCTTCGGTTTCTCACCGACCCAACGTA
FD553350       <-- ........................CTTCGGTTTCTCACCGACCCAGCGTA
EW729684       <-- .....................................CCGACCCAGCGTA
FD565881       <-- ................................................TA
EX776985       <-- ..................................................
EY921038       <-- ..................................................
EV567627       --> TCCTCCTTGCACCACGGTTCAGTTCTTCGGTTTCTCACCGACCCAGCGTA
EV569616       --> TCCTCCTTGCACCACGGTTCAGTTCTTCGGTTTCTCACCGACCCAGCGTA
FD557185       --> TCCTCCTTGCACCACGGTTCAGTTCTTCGGTTTCTCACCGACCCAGCGTA
FD561830       --> TCCTCCTTGCACCACTGTTCAGTTCTTCGGTTTCTCACCGACCCAACGTA
FD561932       --> TCCTCCTTGCACCACTGTTCAGTTCTTCGGTTTCTCACCGACCCAACGTA
EY925589       --> TCCTCCTTGCACCACGGTTCAGTTCTTCGGTTTCTCACCGACCCAGCGTA
FY434883       --> TCCTCCTTGCACCACGGTTCAGTACTTCGGTTTCTCACCGACCCAGCGTA
EX773523       --> TCCTCCTTGCACCACGGTTCAGTTCTTCGGTTTCTCACCGACCCAGCGTA

               148    -    198
UN08506        --> AACTGGGTGGGTTAACGGTAACCCGGAACAATCTGGCGCAGGATTTTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX777319       <-- AACTGGGTGGGTTAACGGTAACCCGGAACAATCTGGCGCAGGATTTTCTC  Raphanus raphanistrum subsp. landra
EV572529       <-- AACTGGGTGGGTTAACGATAACCCGGAACAATCTGGCGCAGGATTTTCTC  Raphanus raphanistrum subsp. landra
FD565959       <-- AACTGGGTGGGTTAACGGTAGCCCGGAACAATCTGGCGCAGGATTTTCTC  Raphanus sativus var. oleiformis
FD553350       <-- AACTGGGTGGGTTAACGGTAACCCGGAACAATCTGGCGCAGGATTTTCTC  Raphanus raphanistrum subsp. landra
EW729684       <-- AACTGGGTGGGTTAACGGTAGCCCGGAACAATCTGGCGCAGGATTTTCTC  Raphanus sativus cv Early Scarlet Globe
FD565881       <-- AACTGGGTGGGTTAACGGTAGCCCGGAACAATCTGGCGCAGGATTTTCTC  Raphanus sativus var. oleiformis
EX776985       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY921038       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV567627       --> AACTGGGTGGGTTAACGATAACCCGGAACAATCTGGCGCAGGATTTTCTC  Raphanus raphanistrum subsp. landra
EV569616       --> AACTGGGTGGGTTAACGGTAACCCGGAACAATCTGGCGCAGGATTTTCTC  Raphanus raphanistrum subsp. landra
FD557185       --> AACTGGGTGGGTTAACGGTAACCCGGAACAATCTGGCGCAGGATTTTCTC  Raphanus raphanistrum subsp. landra
FD561830       --> AACTGGGTGGGTTAACGGTAGCCCGGAACAATCTGGCGCAGGATTTTCTC  Raphanus sativus var. oleiformis
FD561932       --> AACTGGGTGGGTTAACGGTAGCCCGGAACAATCTGGCGCAGGATTTTCTC  Raphanus sativus var. oleiformis
EY925589       --> AACTGGGTGGGTTAACGGTAACCCGGAACAATCTGGCGCAGGATTTTCTC  Raphanus raphanistrum subsp. landra
FY434883       --> AACTGGGTGGGTTAACGGTAGCCCGGAACAATCTGGCGCAGGATTTTCTC  Raphanus sativus cv GSK3-1
EX773523       --> AACTGGGTGGGTTAACGGTAACCCGGAACAATCTGGCGCAGGATTTTCTC  Raphanus raphanistrum subsp. landra

               198    -    248
UN08506        --> GGGGACTGGGGGGCTCGAGACCCTTACCCGGAGGAGATAGCTAGCCAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX777319       <-- GGGGACTGGGGGGCTCGAGACCCTTACCCGGAGGAGATAGCTAGCCAGTT  Raphanus raphanistrum subsp. landra
EV572529       <-- GGGGACTGGGGGGCTCGAGACCCTTACCCGGAGGAGATAGCTAGGCAGTT  Raphanus raphanistrum subsp. landra
FD565959       <-- GGGGACTGGGGAGCTCGAGACCCTTACCCGGAGGAGATAGCTAGCCAGTT  Raphanus sativus var. oleiformis
FD553350       <-- GGGGACTGGGGGGCTCGAGACCCTTACCCGGAGGAGATAGCTAGCCAGTT  Raphanus raphanistrum subsp. landra
EW729684       <-- GGGGACTGGGGAGCTCGAGACCCTTACCCGGAGGAGATAGCTAGCCAGTT  Raphanus sativus cv Early Scarlet Globe
FD565881       <-- GGGGACTGGGGAGCTCGAGACCCTTACCCGGAGGAGATAGCTAGCCAGTT  Raphanus sativus var. oleiformis
EX776985       <-- ..................................................  Raphanus raphanistrum subsp. landra
EY921038       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV567627       --> GGGGACTGGGGGGCTCGAGACCCTTACCCGGAGGAGATAGCTAGGCAGTT  Raphanus raphanistrum subsp. landra
EV569616       --> GGGGACTGGGGGGCTCGAGACCCTTACCCGGAGGAGATAGCTAGCCAGTT  Raphanus raphanistrum subsp. landra
FD557185       --> GGGGACTGGGGGGCTCGAGACCCTTACCCGGAGGAGATAGCTAGCCAGTT  Raphanus raphanistrum subsp. landra
FD561830       --> GGGGACTGGGGAGCTCGAGACCCTTACCCGGAGGAGATAGCTAGCCAGTT  Raphanus sativus var. oleiformis
FD561932       --> GGGGACTGGGGAGCTCGAGACCCTTACCCGGAGGAGATAGCTAGCCAGTT  Raphanus sativus var. oleiformis
EY925589       --> GGGGACTGGGGGGCTCGAGACCCTTACCCGGAGGAGATAGCTAGCCAGTT  Raphanus raphanistrum subsp. landra
FY434883       --> GGGGACTGGGGGGCTCGAGACCCTTACCCGGAGGAGATAGCTAGCCAGTT  Raphanus sativus cv GSK3-1
EX773523       --> GGGGACTGGGGGGCTCGAGACCCTTACCCGGAGGAGATAGCTAGCCAGTT  Raphanus raphanistrum subsp. landra

               248    -    298
UN08506        --> CGGTGATAAAGTGTTGGGACCCCAAAGCACTGAGCACAAGATTCTGATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX777319       <-- CGGTGATAAAGTGTTGGGACCCCAAAGCACTGAGCACAAGATTCTGATTC
EV572529       <-- CGGTGATAAAGTGTTGGGACCCCAAAGCACTGAGCACAAGATTCTGATTC
FD565959       <-- CGGTGATAAAGTGTTGGGACCCCAAAGCACTGAGCACAAGATTCTGATTC
FD553350       <-- CGGTGATAAAGTGTTGGGACCCCAAAGCACTGAGCACAAGATTTTGATTC
EW729684       <-- CGGTGATAAAGTGTTGGGACCCCAAAGTACTGAGCACAAGATTCTGATTC
FD565881       <-- CGGTGATAAAGTGTTGGGACCCCAAAGCACTGAGCACAAGATTCTGATTC
EX776985       <-- .............................................GATTC
EY921038       <-- .............................................GATTC
EV567627       --> CGGTGATAAAGTGTTGGGACCCCAAAGCACTGAGCACAAGATTCTGATTC
EV569616       --> CGGTGATAAAGTGTTGGGACCCCAAAGCACTGAGCACAAGATTCTGATTC
FD557185       --> CGGTGATAAAGTGTTGGGACCCCAAAGCACTGAGCACAAGATTCTGATTC
FD561830       --> CGGTGATAAAGTGTTGGGACCCCAAAGCACTGAGCACAAGATTCTGATTC
FD561932       --> CGGTGATAAAGTGTTGGGACCCCAAAGCACTGAGCACAAGATTCTGATTC
EY925589       --> CGGTGATAAAGTGTTGGGACCCCAAAGCACTAAGCACAAGATTCTGATTC
FY434883       --> CGGTGATAAAGTGTTGGGACCCCAAAGCACTGAGCACAAGATTCTGATTC
EX773523       --> CGGTGATAAAGTGTTGGGACCCCAAAGCACTGAGCACAAGATTCTGATTC

               298    -    348
UN08506        --> CTAATGCCTCTGTTCTCTCCCTCTCCCAGCTCCAATGCTCCCCTGTTTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX777319       <-- CTAATGCCTCTGTTCTCTCCCTCTCCCAGCTCCAATGCTCCCCTGTTTCG
EV572529       <-- CTAATGCCTCTGTTCTCTCCCTCTCCCAGCTCCAATGCTCCCCTGTTTCG
FD565959       <-- CTAATGCCTCTGTTCTCTCCCTCTCCCAGCTCCAATGCTCCCCTGTTTCG
FD553350       <-- CTAATGCCTCTGTTCTCTCCCTCTCCCAGCCCCAATGCTCCCCTGTTTCG
EW729684       <-- CTAGTGCCTCTGTTCTCTCCCTCTCCCAGCTCCAATGCTCCCCTGTGTCG
FD565881       <-- CTAATGCCTCTGTTCTCTCCCTCTCCCAGCTCCAATGCTCCCCTGTTTCG
EX776985       <-- CTAATGCCTCTGTTCTCTCCCTCTCCCAGCTCCAATGCTCCCCTGTTTCG
EY921038       <-- CTAATGCCTCTGTTCTCTCCCTCTCCCAGCTCCAATGCTCCCCTGTTTCG
EV567627       --> CTAATGCCTCTGTTCTCTCCCTCTCCCAGCTCCAATGCTCCCCTGTTTCG
EV569616       --> CTAATGCCTCTGTTCTCTCCCTCTCCCAGCTCCAATGCTCCCCTGTTTCG
FD557185       --> CTAATGCCTCTGTTCTCTCCCTCTCCCAGCCCCAATGCTCCCCTGTTTCG
FD561830       --> CTAATGCCTCTGTTCTCTCCCTCTCCCAGCTCCAATGCTCCCCTGTTTCG
FD561932       --> CTAATGCCTCTGTTCTCTCCCTCTCCCAGCTCCAATGCTCCCCTGTTTCG
EY925589       --> CTAATGCCTCTGTTCTCTCCCTCTCCCAGCTCCAATGCTCCCCTGTTTCG
FY434883       --> CTAATGCCTCTGTTCTCTCCCTCTCCCAGCTCGAATGCTCCCCTGTTTCG
EX773523       --> CTAATGCCTCTGTTCTCTCCCTCTCCCAGCTCCAATGCTCCCCTGTTTCG

               348    -    398
UN08506        --> CCTTCTCAGGCTCCGTTATCCCCCGATGATGCAACAAAGCTCCTCCATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX777319       <-- CCTTCTCAGGCTCCGTTATCCCCCGATGATGCAACAAAGCTCCTCCATAA
EV572529       <-- CCTTCTCAGGCTCCGTTATCCCCCGATGATGCAACAAAGCTCCTCCATAA
FD565959       <-- CCTTCTCAGGCTCCGTTATCCCCCGATGATGCAACAAAGCTCCTCCATAA
FD553350       <-- CCTTTTCAGGCTCCGTTATCCCCCGATGATGCAACAAAGCTCCTCCATAA
EW729684       <-- CCTTCTCAGGCTCCGTTATCCCCCGATGATGCAACAAAGCTCCTCCGTAA
FD565881       <-- CCTTCTCAGGCTCCGTTATCCCCCGATGATGCAACAAAGCTCCTCCATAA
EX776985       <-- CCTTCTCAGGCTCCGTTATCCCCCGATGATGCAACAAAGCTCCTCCATAA
EY921038       <-- CCTTCTCAGGCTCCGTTATCCCCCGATGATGCAACAAAGCTCCTCCATAA
EV567627       --> CCTTCTCAGGCTCCGTTATCCCCCGATGATGCAACAAAGCTCCTCCATAA
EV569616       --> CCTTCTCAGGCTCCGTTATCCCCCGATGATGCAACAAAGCTCCTCCATAA
FD557185       --> CCTTCTCAGGCTCCGTTATCCCCCGATGATGCAACAAAGCTCCTCCATAA
FD561830       --> CCTTCTCAGGCTCCGTTATCCCCCGATGATGCAACAAAGCTCCTCCATAA
FD561932       --> CCTTCTCAGGCTCCGTTATCCCCCGATGATGCAACAAAGCTCCTCCATAA
EY925589       --> CCTTCTCAGGCTCCGTTATCCCCCGATGATGCAACAAAGCTCCTCCATAA
FY434883       --> CCTTCGCAGGCTCCGTTATCCCCCGATGATGCAACAAAGCTCCTCCATAA
EX773523       --> CCTTCTCAGGCTCCGTTATCCCCCGATGATGCAACAAAGCTCCTCCATAA

               398    -    448
UN08506        --> GGTCTTGGGGTGGAGTATAATGGAGGATGAAGCGGGTGGTCTGAAAATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX777319       <-- GGTCTTGGGGTGGAGTATAATGGAGGATGAAGCGGGTGGTCTGAAAATAA
EV572529       <-- GGTCTTGGGGTGGAGTATAATGGAGGATGAAGCGGGTGGTCTGAAAATAA
FD565959       <-- GGTCTTGGGGTGGAGTATAATGGAGGATGAAGCGGGTGGTCTGAAAATAA
FD553350       <-- GGTCTTGGGGTGGAGTATAATGGAGGATGAAGCGGGTGGTTTGAAAATAA
EW729684       <-- GGTCTTGGGGTGGAGTATAATGGAGGATGAAGCGGGTGGTCTGAAAATAA
FD565881       <-- GGTCTTGGGGTGGAGTATAATGGAGGATGAAGCGGGTGGTCTGAAAATAA
EX776985       <-- GGTCTTGGGGTGGAGTATAATGGAGGATGAAGCGGGTGGTCTGAAAATAA
EY921038       <-- GGTCTTGGGGTGGAGTATAATGGAGGATGAAGCGGGTGGTCTGAAAATAA
EV567627       --> GGTCTTGGGGTGGAGTATAATGGAGGATGAAGCGGGTGGTCTGAAAATAA
EV569616       --> GGTCTTGGGGTGGAGTATAATGGAGGATGAAGCGGGTGGTCTGAAAATAA
FD557185       --> GGTCTTGGGGTGGAGTATAATGGAGGATGAAGCGGGTGGTCTGAAAATAA
FD561830       --> GGTCTTGGGGTGGAGTATAATGGAGGATGAAGCGGGTGGTCTGAAAATAA
FD561932       --> GGTCTTGGGGTGGAGTATAATGGAGGATGAAGCGGGTGGTCTGAAAATAA
EY925589       --> GGTCTTGGGGTGGAGTATAATGGAGGATGAAGCGGGTGGTCTGAAAATAA
FY434883       --> GGTCTTGGGGTGGAGTATAATGGAGGATGAAGCGGGTGGTCTGAAAATAA
EX773523       --> GGTCTTGGGGTGGAGTATAATGGAGGATGAAGCGGGTGGTCTGAAAATAA

               448    -    498
UN08506        --> GGTGCATGTGGAAGGTGAGGGATTTTGGGTGCGGCGTTGAACTCATTAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX777319       <-- GGTGCATGTGGAAGGTGAGGGATTTTGGGTGCGGCGTTGAACTCATTAAC
EV572529       <-- GGTGCATGTGGAAGGTGAGGGATTTTGGGTGCGGCGTTGAACTCATTAAC
FD565959       <-- GGTGCATGTGGAAGGTGAGGGATTTTGGGTGCGGCGTTGAACTCATTAAC
FD553350       <-- GGTGCATGTGGAAGGTGAGGGATTTTGGGTGCGGCGTTGAACTCATTAAC
EW729684       <-- GGTGCATGTGGAAGGTGAGGGATTTTGGGTGCGGCGTTGAACTCATTAAC
FD565881       <-- GGTGCATGTGGAAGGTGAGGGATTTTGGGTGCGGCGTTGAACTCATTAAC
EX776985       <-- GGTGCATGTGGAAGGTGAGGGATTTTGGGTGCGGCGTTGAACTCATTAAC
EY921038       <-- GGTGCATGTGGAAGGTGAGGGATTTTGGGTGCGGCGTTGAACTCATTAAC
EV567627       --> GGTGCATGTGGAAGGTGAGGGATTTTGGGTGCGGCGTTGAACTCATTAAC
EV569616       --> GGTGCATGCGGAAGGTGAGGGATTTTGGGTGCGGCGTTGAACTCATTAAC
FD557185       --> GGTGCATGTGGAAGGTGAGGGATTTTGGGTGCGGCGTTGAACTCATTAAC
FD561830       --> GGTGCATGTGGAAGGTGAGGGATTTTGGGTGCGGCGTTGAACTCATTAAC
FD561932       --> GGTGCATGTGGAAGGTGAGGGATTTTGGGTGCGGCGTTGAACTCATTAAC
EY925589       --> GGTGCATGTGGAAGGTGAGGGATTTTGGGTGCGGCGTTGAACTCATTAAC
FY434883       --> GGTGCATGTGGAAGGTGAGGGATTTTGGGTGCGGCGTTGAACTCATTAAC
EX773523       --> GGTGCATGTGGAAGGTGAGGGATTTTGGGTGCGGCGTTGAACTCATTAAC

               498    -    548
UN08506        --> AGGATCCATAAGGTTGCTGAAGCTTCTGGTCATTACCCTTCTCTCCATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX777319       <-- AGGATCCATAAGGTTGCTGAAGCTTCTGGTCATTACCCTTCTCTCCATTT
EV572529       <-- AGGATCCATAAGGTTGCTGAAGCTTCTGGTCATTACCCTTCTCTCCATTT
FD565959       <-- AGGATCCATAAGGTTGCTGAAGCTTCTGGTCATTACCCTTCTCTCCATTT
FD553350       <-- AGGATCCATAAGGTTGCTGAAGCTTTTGGTCATTACCCTTCTCTCCATTT
EW729684       <-- AGGATCCATAAGGTTGCTGAAGCTTCTGGTCATTACCCTTCTCTCCATTT
FD565881       <-- AGGATCCATAAGGTTGCTGAAGCTTCTGGTCATTACCCTTCTCTCCATTT
EX776985       <-- AGGATCCATAAGGTTGCTGAAGCTTTTGGTCATTACCCTTCTCTCCATTT
EY921038       <-- AGGATCCATAAGGTTGCTGAAGCTTCTGGTCATTACCCTTCTCTCCATTT
EV567627       --> AGGATCCATAAGGTTGCTGAAGCTTCTGGTCATTACCCTTCTCTCCATTT
EV569616       --> AGGATCCATAAGGTTGCTGAAGCTTCTGGTCATTACCCTTCTCTCCATTT
FD557185       --> AGGATCCATAAAGTTGCTGA..............................
FD561830       --> AGGATCCATAAGGTTGCTGAAGCTTCTGGTCATTACCCTTCTCTCCATTT
FD561932       --> AGGATCCATAAGGTTGCTGAAGCTTCTGGTCATTACCCTTCTCTCCATTT
EY925589       --> AGGATCCA..........................................
FY434883       --> AGGATCCATAAGGTTGCTGAAGCTTCTGGCCATTACCCTTCTCTCCATTT
EX773523       --> AGGATCCATAAGGTTGCTGAAGCTTCTGGTCATTACCCTTCTCTCCATTT

               548    -    598
UN08506        --> GGAAAGTCCTACCCAAGTTAGAGCTGAACTATCTACCTCTTCTATTGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX777319       <-- GGAAAGTCCTACCCAAGTTAGAGCTGAACTATCTATCTCTTCTATTGGTG  Raphanus raphanistrum subsp. landra
EV572529       <-- GGAAAGTCCTACCCAAGTTAGAGCTGAACTATCTACCTCTTCTATTGGTG  Raphanus raphanistrum subsp. landra
FD565959       <-- GGAAAGTCCTACCCAAGTTAGAGCTGAACTATCTACCTCTTCCATTGGTG  Raphanus sativus var. oleiformis
FD553350       <-- GGAAAGTCCTACCCAAGTTAGAGCTGAACTATTTACCTTTTTTATTGGTG  Raphanus raphanistrum subsp. landra
EW729684       <-- GGAAAGTCCTACCCAAGTTAGAGCTGAACTATCTACCTCTTCCATTGGTG  Raphanus sativus cv Early Scarlet Globe
FD565881       <-- GGAAAGTCCTACCCAAGTTAGAGCTGAACTATCTACCTCTTCCATTGGTG  Raphanus sativus var. oleiformis
EX776985       <-- GGAAAGTCCTACCCAAGTTAGAGCTGAACTATCTACCTCTTCTATTGGTG  Raphanus raphanistrum subsp. landra
EY921038       <-- GGAAAGTCCTACCCAAGTTAGAGCTGAACTATCTACCTCTTCTATTGGTG  Raphanus raphanistrum subsp. landra
EV567627       --> GGAAAGTCCTACCCAAGTTAGAGCTGAACTATCTACCTCTTCTATTGGTG  Raphanus raphanistrum subsp. landra
EV569616       --> GGAAAGTCCTACCCAAGTTAGAGCTGAACTATCTACCTCTTCTATTGGTG  Raphanus raphanistrum subsp. landra
FD557185       --> ..................................................  Raphanus raphanistrum subsp. landra
FD561830       --> GGAAAGTCCTACCCAAGTTAGAGCTGAACTATCTACC.............  Raphanus sativus var. oleiformis
FD561932       --> GGAAAGTCCTACCCAAGTTAGAGCTGAACTATCTACCTCTTCCATTGGTG  Raphanus sativus var. oleiformis
EY925589       --> ..................................................  Raphanus raphanistrum subsp. landra
FY434883       --> GGAAAGTCCTACCCAAGTTAGAGCTGAACTATCTACCTCTTCCATTGGTG  Raphanus sativus cv GSK3-1
EX773523       --> GGAAAGTCCTACCCAAGTTAGAGCTGAACTATCTATCTCTTCTATTGGTG  Raphanus raphanistrum subsp. landra

               598    -    648
UN08506        --> GG-CTGAGTATGAACGATTTCATAATGGCGGCAAAGATAGATGACATCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX777319       <-- GG-CTGAGTATGAACGATTTCATAATGGCGGCAAAGATAGATGACATCAA
EV572529       <-- GG-CTGAGTATGAACGATTTCATAATGGCGGCAAAGATAGATGACATCAA
FD565959       <-- GG-CTGAGTATGAACGATTTCATAATGGCGGCAAAGATAGATGACATCAA
FD553350       <-- GG-CTGAGTATGAACGATTTCATAATGGCGGCAAAGATAGATGACATCAA
EW729684       <-- GG-CTGAGTATGAACGATTTCATAATGGCGGCAAAGATAGATGACATCAA
FD565881       <-- GG-CTGAGTATGAACGATTTCATAATGGCGGCAAAGATAGATGACATCAA
EX776985       <-- GG-CTGAGTATGAACGATTTCATAATGGCGGCAAAGATAGATGACATCAA
EY921038       <-- GG-CTGAGTATGAACGATTTCATAATGGCGGCAAAGATAGATGACATCAA
EV567627       --> GG-CTGAGTATGAACGATTTCATAATGGCGGCAAAGATAGATGACATCAA
EV569616       --> GG-CTGAGTATGAACGATTTCATAATGGCGGCAAAGATAGATGACATCAA
FD557185       --> ..................................................
FD561830       --> ..................................................
FD561932       --> GG-CTGAGTATGAACGATTTCATAATGGCGGCAAAGATAGATGACATCAA
EY925589       --> ..................................................
FY434883       --> GG-CTGAGTATGAACGATTTCATAATGGCGGCAAAGATAGATGACATCAA
EX773523       --> GGGCTGAGTATGAACGATTTCATAATGGCGGCAAAGATAGATGACATCAA

               648    -    698
UN08506        --> GACTTCTGATCTTTCCCCTAGGAAAAGAGCTTGGGCGTAACAAACTTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX777319       <-- GACTTCTGATCTTTCCCCTAGGAAAAGAGCTTGGGCGTAACAAACTTGTT
EV572529       <-- GACTTCTGATCTTTCCCCTAGGAAAAGAGCTTGGGCGTAACAAACTTGTT
FD565959       <-- GACTTCTGATCTTTCCCCTAGGAAAAGAGCTTGGGGGTAACAAACTTGTT
FD553350       <-- GACTTCTGATCTTTCCCCTAGGAAAAGAGCTTGGGCGTAACAAACTTGTT
EW729684       <-- GACTTCTGATCTTTCCCCTAGGAAAAGAGCTTGGGCGTAACAAACTTGTT
FD565881       <-- GACTTCTGATCTTTCCCCTAGGAAAAGAGCTTGGGCGTAACAAACTTGTT
EX776985       <-- GACTTCTGATCTTTCCCCTAGGAAAAGAGCTTGGGGGTAACAAACTTGTT
EY921038       <-- GACTTCTGATCTTTCCCCTAGGAAAAGAGCTTGGGCGTAACAAACTTGTT
EV567627       --> GACTTCTGATCTTTCCCCTAGGAAAAGAGCTTGGGCGTAACAAACTTGTT
EV569616       --> GACTTCTGATCTTTCCCCTAG-AAAAGAGCTTGGGCGTAACATACTTGTT
FD557185       --> ..................................................
FD561830       --> ..................................................
FD561932       --> GACTTCTGATCTTTCCCCTAG-AAAAGAGCTTGGGCGTAACAAACTTGTT
EY925589       --> ..................................................
FY434883       --> GACTTCTGATCTTTCCCCTAGGAAAAGAGCTTGGGCGTAACAAACTTGTT
EX773523       --> GACTTCTGATCTTTCCCCTAGGAAA-GAGCTTGGGCGTAACAAACTTGTT

               698    -    748
UN08506        --> CTTTTTTTTTT-AATTATCTCATATTTGTGACATTTTTGTATGATAACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX777319       <-- CTTTTTTTTTT-AATTATCTCATATTTGTGACATTTTTGTATGATAACAT
EV572529       <-- CTTTTTTTTTT-AATTATCTCATATTTGTGACATTTTTGTATGATAACAT
FD565959       <-- CTTTTTTTTTT-ACTTATCTCATATTTGTGACATTTTTGTATGATAACAT
FD553350       <-- CTTTTTTTTTT-AATTATTTCATATTTGTGACATTTTTGTATGATAACAT
EW729684       <-- CTTTTTTTTTT-ATTTATCTCATATTTGTGACATTTTTGTATGATAACAT
FD565881       <-- CTTTTTTTTTT-ACTTATCTCATATTTGTGACATTTTTGTATGATAACAT
EX776985       <-- CTTTTTTTTTTTAATTATCTCATATTTGTGACATTTTTGTATGATAACAT
EY921038       <-- CTTTTTTTTTTTAATTATCTCATATTTGTGACATTTTTGTATGATAACAT
EV567627       --> CTTTTTTTTTT-AATTATCTCATATTTGTGACATTTTTGTATGATAACAT
EV569616       --> CTTTTTTTTTT-AATTATCTCATATTTGTGACATTTTTGTATGATAACAT
FD557185       --> ..................................................
FD561830       --> ..................................................
FD561932       --> CTTTTTTT..........................................
EY925589       --> ..................................................
FY434883       --> CTTTTTTTTTTTACTTATCTCATATTTGTGACATTTTTGTATGATAACAT
EX773523       --> CTTTTTTTTT--AATTATCTCATATTTGTGACATTTTTGTATGATAACAT

               748    -    798
UN08506        --> ATAATACACGTGATGTATTCGTTGGTCTTTATGTTAAGTTATATAGAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX777319       <-- ATAATACACGTGATGTATTCGTTGGTC.......................
EV572529       <-- ATAATACACGTGATGTATTCGTTGGTCTTTATGTTAAGTTATATAGAAAC
FD565959       <-- ATAATACACGTGATGTATTCGTTGGTCTTTATGTTAAGTTATATAGAAAC
FD553350       <-- ATAATACACGTGATGTATTCGTTGGTCTTTATGTTAAGTTATATAGAg..
EW729684       <-- ATAATACACGTGATGTCTTCGTTGGcc.......................
FD565881       <-- ATAATACACGTGATGTATTCGTTGGTCTTTATGTTAAGTTATATAGAAAC
EX776985       <-- ATAATACACGTGATGTATTCGTTGGTCTTTATGTTAAGTTATATAGAAAC
EY921038       <-- ATAATACACGTGATGTATTCGTTGGTCTTTATGTTAAGTTATATAGAAAC
EV567627       --> ATAATACACGTGATGTATTCGTTGGTCTTTATGTTAAGTTATATAGAAAC
EV569616       --> ATAATACACGTGATGTATTCGTTGGTCTTTATGTTAAGTTATATAGAAAC
FD557185       --> ..................................................
FD561830       --> ..................................................
FD561932       --> ..................................................
EY925589       --> ..................................................
FY434883       --> ATAATACACGTGATGTATTCGTTGGTCTTTATGTTAAGTTATATAGAAAC
EX773523       --> ATA-TACACGTGATGTATTCGTTGG.........................

               798    -    848
UN08506        --> TATGTATTATTCATAATCATATTGG-AAACGATCATGTAATTCATAAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX777319       <-- ..................................................
EV572529       <-- TATGTATTATTCATAATCATATTGG-AAACGATCATGTAATTCATAAGAC
FD565959       <-- TATGTATTATTCATAATCATATTGG-AAAgcatttttagcac........
FD553350       <-- ..................................................
EW729684       <-- ..................................................
FD565881       <-- TATGTATTATTCATAATCATATTGG-AAAgcatttttagcac........
EX776985       <-- TATGTATTATTCATg...................................
EY921038       <-- TATGTATTATTCATAATCATATTGG-AAACGATCATGTAATTCATAAGAC
EV567627       --> TATGTATTATTCATAATCATATTGG-AAACGATCATGTAATTCA......
EV569616       --> TATGTATTATTCATAATCATATTGGGAAACG...................
FD557185       --> ..................................................
FD561830       --> ..................................................
FD561932       --> ..................................................
EY925589       --> ..................................................
FY434883       --> TATGTATTATTCATAATCATATTGG-AAAgcatttttagcac........
EX773523       --> ..................................................

               848    -    898
UN08506        --> ATACATTAATAACTGATATTTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~
EX777319       <-- ........................
EV572529       <-- ........................
FD565959       <-- ........................
FD553350       <-- ........................
EW729684       <-- ........................
FD565881       <-- ........................
EX776985       <-- ........................
EY921038       <-- ATACATTAATAACTGATATTTGTT
EV567627       --> ........................
EV569616       --> ........................
FD557185       --> ........................
FD561830       --> ........................
FD561932       --> ........................
EY925589       --> ........................
FY434883       --> ........................
EX773523       --> ........................