1      -     51
UN08525        --> GAAACGGTAGACTAGTCATACTTGCAAGATTTGTCCAGTCGGAATATTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754161       <-- ..................................................
EY900359       <-- ..................................................
EY919270       --> GAAACGGTAGACTAGTCATACTTGCAAGATTTGTCCAGTCGGAATATTTT
EV532611       --> .......................................gccctgtcgaa
EY895922       --> ..................................................
EX760528       --> ..................................................

               51     -    101
UN08525        --> AGTAAACACTTACTCGAAACAAAAGCGGAGACACGAAAAAGTTCAAAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754161       <-- ..................................................
EY900359       <-- ..................................................
EY919270       --> AGTAAACACTTACTCGAAACAAAAGCTGAGACACGAGAAAGTTCAAAAAT
EV532611       --> atattttagtaacacttAACAAAAGCGGAGACACGAAAAAGTTCAAAAAT
EY895922       --> .....ttagtaacacttAACAAAAGCGGAGACACGAAAAAGTTCAAAAAT
EX760528       --> ..................................................

               101    -    151
UN08525        --> GTGTAACAA---GTTAGATCTCTGGAGTTTACATAAAATCTATGCTCGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754161       <-- ..................................................
EY900359       <-- ..................................................
EY919270       --> GTGTAACAACAAGTTAGATCTCTGGAGTTTACATAAAATCTATGATGGTC
EV532611       --> GTGTAACAA---GTTAGATCTCTGGAGTTTACATAAAATCTATGCTCGTC
EY895922       --> GTGTAACAA---GTTAGATCTCTGGAGTTTACATAAAATCTATGCTCGTC
EX760528       --> ..................................................

               151    -    201
UN08525        --> TCCTCCATTAACTAACAACAGAGTAAACTGGTAAACTTTCCAGCAGATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754161       <-- ..................................................
EY900359       <-- ..................................................
EY919270       --> TCCTCCATTAACTAACAACAGAGTAAACTGGTAAACTTTCCAGCAGATAT
EV532611       --> TCCTCCATTAACTAACAACAGAGTAAACTGGTAAACTTTCCAGCAGATAT
EY895922       --> TCCTCCATTAACTAACAACAGAGTAAACTGGTAAACTTTCCAGCAGATAT
EX760528       --> ..................................................

               201    -    251
UN08525        --> TGTATCCAGGCACCAAACTGAATCGGTAGGGTTTCTGAGCATCGAAAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754161       <-- ..................................................
EY900359       <-- ..................................................
EY919270       --> TGTATCCAGGCTCCAAACTGAATCGGTAGGGTTTCCGAGCATCGAAAATC
EV532611       --> TGTATCCAGGCACCAAACTGAATCGGTAGGGTTTCTGAGCATCGAAAATC
EY895922       --> TGTATCCAGGCACCAGACTGAATCGGTAGGGTTTCTGAGCATCGAAAATC
EX760528       --> ........................................ATCGAAAATC

               251    -    301
UN08525        --> CAGAAATTAAGCTGGCAACTGGAGCTTTTTGTTGTTCTTCCAGCTTAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754161       <-- .........................TTTTTGTT-TTTTTCCAGCTTAGGA
EY900359       <-- ..................................................
EY919270       --> CAGAAATTAAGCTGGCAACTGGAGCTTTTTGTTGTTCTTCCAGCTTAGGA
EV532611       --> CAGAAATTAAGCTGGCAACTGGAGCTTTTTGTTGTTCTTCCAGCTTAGGA
EY895922       --> CAGAAATTAAGCTGGCAACTGGAGCTTTTTGTTGTTCTTCCAGCTTAGGA
EX760528       --> CAGAAATTAAGCTGGCAACTGGAGCTTTTTGTTGTTCTTCCAGCTTAGGA

               301    -    351
UN08525        --> AATAATAATAGAAGAAGTCGGCATAGAGCAATGTCTGAACAAACCCCGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754161       <-- AATAATAATAGAAGAAGTCGGCATAGAGCAATGTCTGAACAAACCCCGCG
EY900359       <-- ......................................ACAAACCCCGCG
EY919270       --> AATAATAATAGAAGAAGTCGGCATAGAGCAATGTCTGAACAAACCCCGCG
EV532611       --> AATAATAATAGAAGAAGTCGGCATAAAGCAATGTCTGAACAAACCCCGCG
EY895922       --> AATAATAATAGAAGAAGTCGGCATAGAGCAATGTCTGAACAAACCCCGCG
EX760528       --> AATAATAATAGAAGAAGTCGGCATAGAGCAATGTCTGAACAAACCCCGCG

               351    -    401
UN08525        --> ATCCATGTTATCCAGTGAACAAAGTGAGGCTCAGTGAAGTAACGGTAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754161       <-- ATCCATGTTATCCAGTGAACAAAGTGAGGCTCAGTGAAGTAACGGTAGAT
EY900359       <-- ATCCATGTTATCCAGTGAACAAAGTGAGGCTCAGTGAAGTAACGGTAGAT
EY919270       --> ATCCATGTTATCCAGTGAACAAAGTGAGGCTCAGTGAAGTAACGGTAGAT
EV532611       --> ATCCATGTTATCCAGTGAACAAAGTGAGGCTCAGTGAAGTAACGGTAGAT
EY895922       --> ATCCATGTTATCCAGTGAACAAAGTGAGGCTCAGTGAAGTAACGGTAGAT
EX760528       --> ATCCATGTTATCCAGTGAACAAAGTGAGGCTCAGTGAAGTAACGGTAGAT

               401    -    451
UN08525        --> CCAGTTTAGGATGTACAATCCCCTGTACCCCCCAAGGAGGAATATGTATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754161       <-- CCAGTTTAGGATGTACAATCCCCTGTACCCCCCAAGGAGGAATATGTATT
EY900359       <-- CCAGTTTAGGATGTACAATCCCCTGTACCCCCCAAGGAGGAATATGTATT
EY919270       --> CCAGTTTAGGATGTACAATCCCCTGTACCCCCCAAGGAGGAATATGTATT
EV532611       --> CCAGTTTAGGATGTACAATCCCCTGTACCCCCCAAGGAGGAATATGTATT
EY895922       --> CCAGTTTAGGATGTACAATCCCCTGTACCCCCCAAGGAGGAATATGTATT
EX760528       --> CCAGTTTAGGATGTACAATCCCCTGTACCCCCCAAGGAGGAATATGTATT

               451    -    501
UN08525        --> GCCCGGTCAAGTTGTCGATATTTCTAGTCCTTTGAAGCAAGACAAGCTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754161       <-- GCCCGGTCAAGTTATCGATATTTCTAGTCCTTTGAAGCAAGACAAGCTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY900359       <-- GCCCGGTCAAGTTGTCGATATTTCTAGTCCTTTGAAGCAAGACAAGCTGA  Raphanus raphanistrum subsp. maritimus
EY919270       --> GGCCGGTCAAGTTATCGATATTTCTAGTCCTTTGAAGCAAGACAAGCTGA  Raphanus raphanistrum subsp. landra
EV532611       --> GCCCGGTCAAGTTGTCGATATTTCTAGTCCTTTGAAGCAAGACAAGCTGA  Raphanus raphanistrum subsp. maritimus
EY895922       --> GCCCGGTCAAGTTGTCGATATTTCTAGTCCTTTGAAGCAAGACAAGCTGA  Raphanus raphanistrum subsp. maritimus
EX760528       --> GCCCGGTCAAGTTATCGATATTTCTAGTCCTTTGAAGCAAGACAAGCTGA  Raphanus raphanistrum subsp. raphanistrum (MS)

               501    -    551
UN08525        --> GGTAATATAGCAACAGCCTCCAAGTACAACGAAAACGTCCACAGTACCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754161       <-- GGTAATATAGCAACAGCCTCCAAGTACAACGAAAACGTCCACAGTACCTC
EY900359       <-- GGTAATATAGCAACAGCCTCCAAGTACAACGAAAACGTCCACAGTACCTC
EY919270       --> GGTAATATAGCAACAGCCTCCAAGTACAACGAAAACGTCCACAGTACCTC
EV532611       --> GGTAATATAGCAACAGCCTCCAAGTACAACGAAAACGTCCACAGTACCTC
EY895922       --> GGTAATATAGCAACAGCCTCCAAGTACAACGAAAACGTCCACAGTACCTC
EX760528       --> AGTAATAT..........................................

               551    -    601
UN08525        --> AAGAAAGGTGAACTTCTCGTGAATGAGAAGAGCTAAGAGAAGGCAGGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754161       <-- AAGAAAGGTGAACTTTTCGTGAATGAGAAGAGCCAAGAGAAGGCAGGGAA
EY900359       <-- AAGAAAGGTGAACTTCTCGTGAATGAGAAGAGCTAAGAGAAGGCAGGGAA
EY919270       --> AAGAAAGGTGAACTTTTCGTGAATGAGAA.....................
EV532611       --> AAGAAAGGTGAACTTCTCGTGAATGAGAAGAGCTAAGAGAA.........
EY895922       --> AAGAAAGGTGAACTTCTCGTGAATGAGAAGAGCTAAGAGAAGGCAGGGAA
EX760528       --> ..................................................

               601    -    651
UN08525        --> GCACAAGGAACCAATGGCGAAAGGTATCTTGCTCTCTGTCGTAAGTCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754161       <-- GGACAAGGAACCAATGGCGAAAGGTATCTTGCTCTCTGTCGTAAGTCCTT
EY900359       <-- GCACAAGGAACCAATGGCGAAAGGTATCTTGCTCTCTGTCGTAAGTCCTT
EY919270       --> ..................................................
EV532611       --> ..................................................
EY895922       --> GCACAAGGAACCAATGGCGAAAGGTATCTTGCTCTCTGTCGTAAGTCCTT
EX760528       --> ..................................................

               651    -    701
UN08525        --> TGGACAGCCTTATGATACCTCATGTACCAAACAATGGAGAAGGAGCTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754161       <-- TGGACGGCCTTGTGATACCTCATGTACCAAACAATGGAGAAGGAGCTTCC
EY900359       <-- TGGACAGCCTTATGATACCTCATGTACCAAACAATGGAGAAGGAGCTTCC
EY919270       --> ..................................................
EV532611       --> ..................................................
EY895922       --> TGGACAGCCTTATGATACCTCATGTACCAAACAATGGAGAAGGAGCTTCC
EX760528       --> ..................................................

               701    -    751
UN08525        --> TAAGAAGACCAACTTCATGAAGGTGTTGTAGACGGAGACAAAGCTCGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754161       <-- TAAGAAGACCAACTTCATGAAGGTGTTGTAGACGGAGACAAGGCTCGTGA
EY900359       <-- TAAGAAGACCAACTTCATGAAGGTGTTGTAGACGGAGACAAAGCTCGTGA
EY919270       --> ..................................................
EV532611       --> ..................................................
EY895922       --> TAAGAAGACCAACTTCATGAAGGTGTTGTAGACGGAGACAAAGCTCGTGA
EX760528       --> ..................................................

               751    -    801
UN08525        --> ATATATCCAAATAACGCGTCGCGAATACAATGGCGTAGAGCTCTTGAGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754161       <-- AAATATCCAAATAACGCGTCGCAAATACAATGGCGTAGAGCTCTTGAGTC
EY900359       <-- ATATATCCAAATAACGCGTCGCGAATACAATGGCGTAGAGCTCTTGAGTC
EY919270       --> ..................................................
EV532611       --> ..................................................
EY895922       --> ATATATCCAAATAACGCGTCGCGAATACAATGGCGTAG............
EX760528       --> ..................................................

               801    -    851
UN08525        --> TTCAATGACACACCAGCGCAGGATTTGATGGTGTGGATCTTGAGGAGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754161       <-- TTCAATGACACACCAGCGCAGGATTTGATGGTGTGGATCTTGAGGAGCAA
EY900359       <-- TTCAATGACACACCAGCGCAGGATTTGATGGTGTGGATCTTGAGGAGCAA
EY919270       --> ..................................................
EV532611       --> ..................................................
EY895922       --> ..................................................
EX760528       --> ..................................................

               851    -    901
UN08525        --> GACGAGGACACTGGCCAGGTGAGTCATATCACCTGCTAATCTGAAAATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754161       <-- GACGAGGACACTGGCCAGGTGAGTCATATCACCTGCTAATCTGAAAATGT
EY900359       <-- GACGAGGACACTGGCCAGGTGAGTCATATCACCTGCTAATCTGAAAATGT
EY919270       --> ..................................................
EV532611       --> ..................................................
EY895922       --> ..................................................
EX760528       --> ..................................................

               901    -    951
UN08525        --> TCATCTTTCTTCTTCTTCTTAGATTGATCTGTGCTGAATCTAATCCTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754161       <-- TCATCTTTCTTCTTCTTCTTAGATCGATCTGTGCTGAATCTAATCCTCTC
EY900359       <-- TCATCTT-CTTCTTCT---TCGATTGATCGGTGCTGAATCTAATCCTCTC
EY919270       --> ..................................................
EV532611       --> ..................................................
EY895922       --> ..................................................
EX760528       --> ..................................................

               951    -   1001
UN08525        --> CTTCGTCTTCCTTCTTCTAGGGTTCAGTGAAGCTCCCTCTCCTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX754161       <-- CTTCGTCTTCCTTCTTCTAGGGTTCAGTGAAGCTCCCTCTCCTGC
EY900359       <-- CTTCGTCTTCCTTCTTCTAGGGTTC....................
EY919270       --> .............................................
EV532611       --> .............................................
EY895922       --> .............................................
EX760528       --> .............................................