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Alignment for radish unigene UN08526

               1      -     51
UN08526        --> GGACTCTGTTTCTCTACCACTCCCAAGTTTCTAAAGTAGTAGAAAGATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571145       <-- ..................................................
EV572117       <-- ..................................................
FD936622       <-- ..................................................
FD530445       <-- ..................................................
EV565903       --> GGACTCTGTTTCTCTACCACTCCCAAGTTTCTAAAGTAG-A-AAA-ATGA
EY897930       --> GGACTCTGTTTCTCTACCACTCCCAAGTTTCTAAAGTAGTAGAAAGATGA
FD534535       --> GGACTCTGTTTCTCTACCACTCCCAAGTTTCTAAAGTAGTAGAAAGATGA
FY436442       --> .................................................A
FY433250       --> ..................................................
FY452299       --> ..................................................
FY433292       --> ..................................................
FD940834       --> ..................................................
EV567122       --> ..................................................
EW715894       --> ..................................................

               51     -    101
UN08526        --> TGATGATGAACGGAGAAGCTACAGAAGCTGAGCTTTTCCTCAACTGTGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571145       <-- ..................................................
EV572117       <-- ..................................................
FD936622       <-- ..................................................
FD530445       <-- ..................................................
EV565903       --> TGATGATGAACGGAGAAGCTACAGAAGCTGAGCTTTTACTCAACTGTAGC
EY897930       --> TGATGATGAACGGAGAAGCTACAGAAGCTGAGCTTTTCCTCAACTGTGCC
FD534535       --> TGATGATAAACGGAGAAGCTACAGAAGCTGAGCTTTTCCTCAACTGTGCC
FY436442       --> TGATGATGAACGGAGAAGCTACAGAAGCTGAGCTTTTCCTCAACTGTGCC
FY433250       --> ..........CGGAGAAGCTACAGAAGCTGAGCTTTTCCTCAACTGTGCC
FY452299       --> ..........CGGAGAAGCTACAGAAGCTGAGCTTTTCCTCAACTGTGCC
FY433292       --> ..............................AGCTTTTCCTCAACTGTGCC
FD940834       --> ..................................................
EV567122       --> ..................................................
EW715894       --> ..................................................

               101    -    151
UN08526        --> GACATGTCTGTCTTAGAGCGCCAAAGGGCTCACCTCAACTACCACCACTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571145       <-- ..................................................
EV572117       <-- ..................................................
FD936622       <-- ..................................................
FD530445       <-- ..................................................
EV565903       --> GACATGTCTGTCCTAGAGCGCCAAAGGGCTCACCTCAACTACCACCACTA
EY897930       --> GACATGTCTGTCTTAGAGCACCAAAGGGCTCACCTCAACTACCACCACTA
FD534535       --> GACATGTCTGTCTTAGAGCACCAAAGGGCTCACCTCAACTACCACCACTA
FY436442       --> GACATGTCTGTCTTAGAGCGCCAAAGGGCTCACCTCAACTACCACCACTA
FY433250       --> GACATGTCTGTCTTAGAGCGCCAAAGGGCTCACCTCAACTACCACCACTA
FY452299       --> GACATGTCTGTCTTAGAGCGCCAAAGGGCTCACCTCAACTACCACCACTA
FY433292       --> GACATGTCTGTCTTAGAGCGCCAAAGGGCTCACCTCAACTACCACCACTA
FD940834       --> ..................................................
EV567122       --> ..................................................
EW715894       --> ..................................................

               151    -    201
UN08526        --> TCCCGGCTTCTTCTCCAATTCTTCCACGATTAACGGCGGCGATATCGACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571145       <-- ..................................................
EV572117       <-- ..................................................
FD936622       <-- ..................................................
FD530445       <-- ..................................................
EV565903       --> TCCCGGCTTCTTCTCCAATTCTTCCACGACTAACGGCGGCGATATTGACG
EY897930       --> TCCCGGCTTCTTCTCCAATTCTTCCACGATTAACGGCGGCGATATCGACG
FD534535       --> TCCCGGCTTCTTCTCCAATTCTTCCACGATTAACGGCGGCGATATCGACG
FY436442       --> TCCCGGCTTCTTCTCCAATTCTTCCACGATTAACGGCGGCGATATCGACG
FY433250       --> TCCCGGCTTCTTCTCCAATTCTTCCACGATTAACGGCGGCGATATCGACG
FY452299       --> TCCCGGCTTCTTCTCCAATTCTTCCACGATTAACGGCGGCGATATCGACG
FY433292       --> TCCCGGCTTCTTCTCCAATTCTTCCACGATTAACGGCGGCGATATCGACG
FD940834       --> ..................................................
EV567122       --> ..................................................
EW715894       --> ..................................................

               201    -    251
UN08526        --> GCTTTCTAGCGTCGGCCGGTCTGGATCTTCCGGTGATTTATGGGGAGACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571145       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV572117       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD936622       <-- ..................................................  Raphanus sativus var. oleiformis
FD530445       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV565903       --> GCTTTCTAGCGTCGGCCGGTTTGGATCTTCCGGCGGTTTATGGATATACG  Raphanus raphanistrum subsp. landra
EY897930       --> GCTTTCTAGCGTCGGCCGGTTTGGATCTTCCGGCGGTTTATGGATATACG  Raphanus raphanistrum subsp. maritimus
FD534535       --> GCTTTCTAGCGTCGGCCGGTTTGGATCTTCCGGCGGTTTATGGATATACG  Raphanus raphanistrum subsp. maritimus
FY436442       --> GCTTTCTAGCGTCGGCCGGTCTGGATCTTCCGGTGATTTATGGGGAGACG  Raphanus sativus cv GSK3-1
FY433250       --> GCTTTCTAGCGTCGGCCGGTCTGGATCTTCCGGTGATTTATGGGGAGACG  Raphanus sativus cv GSK3-1
FY452299       --> GCTTTCTAGCGTCGGCCGGTCTGGATCTTCCGGTGATTTATGGGGAGACG  Raphanus sativus cv GSK3-1
FY433292       --> GCTTTCTAGCGTCGGCCGGTCTGGATCTTCCGGTGATTTATGGGGAGACG  Raphanus sativus cv GSK3-1
FD940834       --> .....................TGGATCTTCCGGTTATTTATGGGGAGACG  Raphanus sativus var. oleiformis
EV567122       --> ..................................................  Raphanus raphanistrum subsp. landra
EW715894       --> ..................................................  Raphanus sativus var. oleiformis

               251    -    301
UN08526        --> ACGGTGCACGGTGACGCGAGAATCTCTGTTACTCCGGGAAATATTACAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571145       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV572117       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD936622       <-- ..................................................  Raphanus sativus var. oleiformis
FD530445       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV565903       --> ACGGTGCACGGTGACGCGAGAATCTCAGTTGCTCCGGGAAATATTACAAC  Raphanus raphanistrum subsp. landra
EY897930       --> ACGGTGCACGGTGACGCGAGAATCTCAGTTGCTCCGGGAAATATTACAAC  Raphanus raphanistrum subsp. maritimus
FD534535       --> ACGGTGCACGGTGACGCGAGAATCTCAGTTGCTCCGGGAAATATTACAAC  Raphanus raphanistrum subsp. maritimus
FY436442       --> ACGGTGCACGGTGACGCGAGAATCTCTGTTACTCCGGGAAATATTACAAC  Raphanus sativus cv GSK3-1
FY433250       --> ACGGTGCACGGTGACGCGAGAATCTCTGTTACTCCGGGAAATATTACAAC  Raphanus sativus cv GSK3-1
FY452299       --> ACGGTGCACGGTGACGCGAGAATCTCTGTTACTCCGGGAAATATTACAAC  Raphanus sativus cv GSK3-1
FY433292       --> ACGGTGCACGGTGACGCGAGAATCTCTGTTACTCCGGGAAATATTACAAC  Raphanus sativus cv GSK3-1
FD940834       --> ACGGTGCACGGTGACGCGAGAATCTCTGTTACTCCGGGAAATATTACAAC  Raphanus sativus var. oleiformis
EV567122       --> ..................................................  Raphanus raphanistrum subsp. landra
EW715894       --> ..................................................  Raphanus sativus var. oleiformis

               301    -    351
UN08526        --> TGAGTCTGGAAATTTCAAGAAAAGGAAGTTTGGTTGCGTCGAGACAGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571145       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV572117       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD936622       <-- ..................................................  Raphanus sativus var. oleiformis
FD530445       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV565903       --> CGAGTCTGGAAATTTCAAGAAAAGGAAGTTTGGTTGCGTCGAGACAGAGA  Raphanus raphanistrum subsp. landra
EY897930       --> CGAGTCTGGAAATTTCAAGAAAAGGAAGTTTGGTTGCGTCGAGACAGAGA  Raphanus raphanistrum subsp. maritimus
FD534535       --> CGAGTCTGGAAATTTCAAGAAAAGGAAGTTTGGTTGCGTCGAGACAGAGA  Raphanus raphanistrum subsp. maritimus
FY436442       --> TGAGTCTGGAAATTTCAAGAAAAGGAAGTTTGGTTGCGTCGAGACAGAGA  Raphanus sativus cv GSK3-1
FY433250       --> TGAGTCTGGAAATTTCAAGAAAAGGAAGTTTGGTTGCGTCGAGACAGAGA  Raphanus sativus cv GSK3-1
FY452299       --> TGAGTCTGGAAATTTCAAGAAAAGGAAGTTTGGTTGCGTCGAGACAGAGA  Raphanus sativus cv GSK3-1
FY433292       --> TGAGTCTGGAAATTTCAAGAAAAGGAAGTTTGGTTGCGTCGAGACAGAGA  Raphanus sativus cv GSK3-1
FD940834       --> CGAGTCTGGAAATTTCAAGAAAAGGAAGTTTGGTTGCGTCGATACAGAGA  Raphanus sativus var. oleiformis
EV567122       --> ..................................................  Raphanus raphanistrum subsp. landra
EW715894       --> ..................................................  Raphanus sativus var. oleiformis

               351    -    401
UN08526        --> CTAAGGTTTGTAATGAGAAGAAGAAGATAATGACAGCAGTTGAGGAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571145       <-- .................AAGAAGAAGATAATGACAGCAGTTGAGGAAGAA
EV572117       <-- ..................................................
FD936622       <-- ..................................................
FD530445       <-- ..................................................
EV565903       --> CTAAGGTTTGTAATGAGAAGAAGAAGATAATGACAGCAGTTGAGGAAGAA
EY897930       --> CTAAGGTTTGTAATGAGAAGAAGAAGATAATGACAGCAGTTGAGGAAGAA
FD534535       --> CTAAGGTTTGTAATGAGAAGAAGAAGATAATGACAGCAGTTGAGGAAGAA
FY436442       --> CTAAGGTTTGTAATGAGAAGAAGAAGATAATGACAGCAGTTGAGGAAGAA
FY433250       --> CTAAGGTTTGTAATGAGAAGAAGAAGATAATGACAGCAGTTGAGGAAGAA
FY452299       --> CTAAGGTTTGTAATGAGAAGAAGAAGATAATGACAGCAGTTGAGGAAGAA
FY433292       --> CTAAGGTTTGTAATGAGAAGAAGAAGATAATGACAGCAGTTGAGGAAGAA
FD940834       --> CTAAGGTTTGTAATGAGAAGAAGAAGATAATGACAGCAGTTGAGGAAGAA
EV567122       --> ..................................................
EW715894       --> ..................................................

               401    -    451
UN08526        --> GAAGAAGAAGAGAAGTCGAAAGTAACAGAGCAGAGCCATAAAAGCATCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571145       <-- GAAGAAGAAGAGAAGTCGAAATTAACAGAGCAGAGCCATAAAAGCATCAT
EV572117       <-- ...............gCGAAAGTAACAGAGCAGAGCCATAAAAGCATCAT
FD936622       <-- ..................................................
FD530445       <-- ..................................................
EV565903       --> GAAGAAGAAGAGAAGTCGAAATTAACAGAGCAGAGCCATAAAAGCATCAT
EY897930       --> GAAGAAGAAGAGAAGTCGAAAGTAACAGAGCAGAGCCATAAAAGCATCAT
FD534535       --> GAAGAAGAAGAGAAGTCGAAAGTAACAGAGCAGAGCCATAAAAGCATCAT
FY436442       --> GAAGAAGAAGAGAAGTCGAAAGTAACAGAGCAGAGCCATAAAAGCATCAT
FY433250       --> GAAGAAGAAGAGAAGTCGAAAGTAACAGAGCAGAGCCATAAAAGCATCAT
FY452299       --> GAAGAAGAAGAGAAGTCGAAAGTAACAGAGCAGAGCCATAAAAGCATCAT
FY433292       --> GAAGAAGAAGAGAAGTCGAAAGTAACAGAGCAGAGCCATAAAAGCATCAT
FD940834       --> GAAGAAGAAGAGAAGTCGAAAGTAACAGAGCAGAGCCATAAAAGCATCAT
EV567122       --> ..................................................
EW715894       --> ..................................................

               451    -    501
UN08526        --> GATGATGAAGATGAAGAATAAAGCGAAGAAAGAACAGAACAGCTGCTCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571145       <-- GATGATGAAGATGAAGAATAAAGCGAAGAAAGAACAGAACAGCTGCTCTA
EV572117       <-- GATGATGAAGATGAAGAATAAAGCGAAGAAAGAACAGAACAGCTGCTCTA
FD936622       <-- ...............................GAACAGAACAGCTGCTCTA
FD530445       <-- ..................................................
EV565903       --> GATGATGAAGATGAAGAATAAAGCGAAGAAAGAACAGAACAGCTGCTCTA
EY897930       --> GATGATGAAGATGAAGAATAAAGCGAAGAAAGAACAGAACAGCTGCTCTA
FD534535       --> GATGATGAAGATGAAGAATAAAGCGAAGAAAGAACAGAACAGCTGCTCTA
FY436442       --> GATGATGAAGATGAAGAATAAAGCGAAGAAAGAACAGAACAGCTGCTCTA
FY433250       --> GATGATGAAGATGAAGAATAAAGCGAAGAAAGAACAGAACAGCTGCTCTA
FY452299       --> GATGATGAAGATGAAGAATAAAGCGAAGAAAGAACAGAACAGCTGCTCTA
FY433292       --> GATGATGAAGATGAAGAATAAAGCGAAGAAAGAACAGAACAGCTGCTCTA
FD940834       --> GATGATGAAGATGAAGAATAAAGCGAAGAAAGAACAGAACAGCTGCTCTA
EV567122       --> ........AGATGAAGAATAAAGCGAAGAAAGAACAGAACAGCTGCTCTA
EW715894       --> ..................................................

               501    -    551
UN08526        --> ACGATTCATCAAAAGTGACGAAAGACTCGCAGAGAACGGATTATATTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571145       <-- ACGATTCATCAAAAGTGACGAAAGACTCGCAGAGAACGGATTATATTCAT
EV572117       <-- ACGATTCATCAAAAGTGACGAAAGACTCGCAGAGAACGGATTATATTCAT
FD936622       <-- ACGATTCATCAAAAGTGACGAAAGACTCGCAGAGAACGGATTATATTCAT
FD530445       <-- ...........................CGCAGAGAACGGATTATATTCAT
EV565903       --> ACGATTCATCAAAAGTGACGAAAGACTCGCAGAGAACGGATTATATTCAT
EY897930       --> ACGATTCATCAAAAGTGACGAAAGACTCGCAGAGAACGGATTATATTCAT
FD534535       --> ACGATTCATCAAAAGTGACGAAAGACTCGCAGAGAACGGATTATATTCAT
FY436442       --> ACGATTCATCAAAAGTGACGAAAGACTCGCAGAGAACGGATTATATTCAT
FY433250       --> ACGATTCATCAAAAGTGACGAAAGACTCGCAGAGAACGGATTATATTCAT
FY452299       --> ACGATTCATCAAAAGTGACGAAAGACTCGCAGAGAACGGATTATATTCAT
FY433292       --> ACGATTCATCAAAAGTGACGAAAGACTCGCAGAGAACGGATTATATTCAT
FD940834       --> ACGATTCATCAAAAGTGACGAAAGACTCGCAGAGAACGGATTATATTCAT
EV567122       --> ACGATTCATCAAAAGTGACGAAAGACTCGCAGAGAACGGATTATATTCAT
EW715894       --> ..................................................

               551    -    601
UN08526        --> GTTCGTGCACGGAGAGGCCAAGCCACCGATAGCCACAGCATTGCAGAACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571145       <-- GTTCGTGCACGGAGAGGCCAAGCCACCGATAGCCACAGCATTGCAGAACG
EV572117       <-- GTTCGTGCACGGAGAGGCCAAGCCACCGATAGCCACAGCATTGCAGAACG
FD936622       <-- GTTCGTGCACGGAGAGGCCAAGCCACCGATAGCCACAGCATTGCAGAACG
FD530445       <-- GTTCGTGCACGGAGAGGCCAAGCCACCGATAGCCACAGCATTGCAGAACG
EV565903       --> GTTCGTGCACGGAGAGGCCAAGCCACCGATAGCCACAGCATTGCAGAACG
EY897930       --> GTTCGTGCACGGAGAGGCCAAGCCGCCGATAGCCACAGCATTGCAGAACG
FD534535       --> GTTCGTGCACGGAGAGGCCAAGCCACCGATAGCCACAGCATTGCAGAACG
FY436442       --> GTTCGTGCACGGAGAGGCCAAGCCACCGATAGCCACAGCATTGCAGAACG
FY433250       --> GTTCGTGCACGGAGAGGCCAAGCCACCGATAGCCACAGCATTGCAGAACG
FY452299       --> GTTCGTGCACGGAGAGGCCAAGCCACCGATAGCCACAGCATTGCAGAACG
FY433292       --> GTTCGTGCACGGAGAGGCCAAGCCACCGATAGCCACAGCATTGCAGAACG
FD940834       --> GTTCGTGCACGGAGAGGCCAAGCCACCGATAGCCACAGCATTGCAGAACG
EV567122       --> GTTCGTGCACGGAGAGGCCAAGCCACCGATAGCCACAGCATTGCAGAACG
EW715894       --> ..................................................

               601    -    651
UN08526        --> AGCTAGAAGAGAAAAGATCAGTGAGAGAATGAAGTTTCTACAAGATTTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571145       <-- AGCTAGAAGAGAAAAGATCAGTGAGAGAATGAAGTTTCTACAAGATTTAG
EV572117       <-- AGCTAGAAGAGAAAAGATCAGTGAGAGAATGAAGTTTCTACAAGATTTAG
FD936622       <-- AGCTAGAAGAGAAAAGATCAGTGAGAGAATGAAGTTTCTACAAGATTTAG
FD530445       <-- AGCTAGAAGAGAAAAGATCAGTGAGAGAATGAAGTTTCTACAAGATTTAG
EV565903       --> AGCTAGAAGAGAAAAGATCAGTGAGAGAATGAAGTTTCTACAAGATTTAG
EY897930       --> AGCTAGAAGAGAAAAGATCAGTGAGAGAATGAAGTTTCTACAAGATTTAG
FD534535       --> AGCTAGAAGAGAAAAGATCAGTGAGAGAATGAAGTTTCTACAAGATTTAG
FY436442       --> AGCTAGAAGAGAAAAGATCAGTGAGAGAATGAAGTTTCTACAAGATTTAG
FY433250       --> AGCTAGAAGAGAAAAGATCAGTGAGAGAATGAAGTTTCTACAAGATTTAG
FY452299       --> AGCTAGAAGAGAAAAGATCAGTGAGAGAATGAAGTTTCTACAAGATTTAG
FY433292       --> AGCTAGAAGAGAAAAGATCAGTGAGAGAATGAAGTTTCTACAAGATTTAG
FD940834       --> AGCTAGAAGAGAAAAGATCAGTGAGAGAATGAAGTTTCTACAAGATTTAG
EV567122       --> AGCTAGAAGAGAAAAGATCAGTGAGAGAATGAAGTTTCTACAAGATTTAG
EW715894       --> ..................................................

               651    -    701
UN08526        --> TTCCTGGATGCGACAAGATCACAGGCAAAGCAGGGATGCTTGATGAGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571145       <-- TTCCTGGATGCGACAAGATCACAGGCAAAGCAGGGATGCTTGATGAGATC
EV572117       <-- TTCCTGGATGCGACAAGATCACAGGCAAGGCAGGGATGCTTGATGAGATC
FD936622       <-- TTCCTGGATGCGACAAGATCACAGGCAAAGCAGGGATGCTTGATGAGATC
FD530445       <-- TTCCTGGATGCGACAAGATCACAGGCAAAGCAGGGATGCTTGATGAGATC
EV565903       --> TTCCTGGATGCGACAAGATCACAGGCAAAGCAGGGATGCTTGATGAGATC
EY897930       --> TTCCTGGATGCGACAAGATCACAGGCAAAGC-GGGATGCTTGATGAGATC
FD534535       --> TTCCTGGATGCGACAAGATCA.............................
FY436442       --> TTCCTGGATGCGACAAGATCACAGGCAAAGCAGGGATGCTTGATGAGATC
FY433250       --> TTCCTGGATGCGACAAGATCACAGGCAAAGCAGGGATGCTTGATGAGATC
FY452299       --> TTCCTGGATGCGACAAGATCACAGGCAAAGCAGGGATGCTTGATGAGATC
FY433292       --> TTCCTGGATGCGACAAGATCACAGGCAAAGCAGGGATGCTTGATGAGATC
FD940834       --> TTCCTGGATGCGACAAGATCACAGGCAAAGCAGGGATGCTTGATGAGATC
EV567122       --> TTCCTGGATGCGACAAGATCACAGGCAAGGCAGGGATGCTTGATGAGATC
EW715894       --> ..................................................

               701    -    751
UN08526        --> ATTAACTATGTTCAGTCTCTTCAGCGACAAGTCGAGTTCCTATCGATGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571145       <-- ATTAACTATGTTCAGTCTCTTCAGCGACAAGTCGAGTTCCTATCGATGAA  Raphanus raphanistrum subsp. landra
EV572117       <-- ATTAACTATGTTCAGTCTCTTCAGCGACAAGTCGAGTTCCTATCGATGAA  Raphanus raphanistrum subsp. landra
FD936622       <-- ATTAACTATGTTCAGTCTCTTCAGCGACAAGTCGAGTTCCTATCGATGAA  Raphanus sativus var. oleiformis
FD530445       <-- ATTAACTATGTTCAGTCTCTTCAGCGACAAGTCGAGTTCCTATCGATGAA  Raphanus raphanistrum subsp. maritimus
EV565903       --> ATTAACTATGTTCAGTCTCTTCAGCGACAAGTCGAGTTCCTATCGATGAA  Raphanus raphanistrum subsp. landra
EY897930       --> ATTAACTATGTTCAGTCTCTTCAGCGACAAGTCGAGTTCCTATCGATGAA  Raphanus raphanistrum subsp. maritimus
FD534535       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY436442       --> ATTAACTATGTTCAGTCTCTTCAGCGACAAGTCGAGTTCTTATCGATGAA  Raphanus sativus cv GSK3-1
FY433250       --> ATTAACTATGTTCAGTCTCTTCAGCGACAAGTCGAGTTCTTATCGATGAA  Raphanus sativus cv GSK3-1
FY452299       --> ATTAACTATGTTCAGTCTCTTCAGCGACAAGTCGAGTTCTTATCGATGAA  Raphanus sativus cv GSK3-1
FY433292       --> ATTAACTATGTTCAGTCTCTTCAGCGACAAGTCGAGTTCTTATCGATGAA  Raphanus sativus cv GSK3-1
FD940834       --> ATTAACTATGTTCAGTCTCTTCAGCGACAAGTCGAGTTCCTATCGATGAA  Raphanus sativus var. oleiformis
EV567122       --> ATTAACTATGTTCAGTCTCTTCAGCGACAAGTCGAGTTCCTATCGATGAA  Raphanus raphanistrum subsp. landra
EW715894       --> ..................................................  Raphanus sativus var. oleiformis

               751    -    801
UN08526        --> GCTAGCAACTGTTAGTCCAAGGCTGGATTTCAACATCGATGACATTTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571145       <-- GCTAGCAACTGTTAGTCCAAGGCTGGATTTCAACATCGATGACATTTTTG
EV572117       <-- GCTAGCAACTGTTAGTCCAAGGCTGGATTTCAACATCGATGACATTTTTG
FD936622       <-- GCTAGCAACTGTTAGTCCAAGGCTGGATTTCAACATCGATGACATTTTTG
FD530445       <-- GCTAGCAACTGTTAGTCCAAGGCTGGATTTCAACATCGATGACATTTTTG
EV565903       --> GCTAGCAACTGTTAGTCCAAGGCTGGATTTCAACATCGATGACATTTTTG
EY897930       --> GCTAGCAACTGTTAGTCCAAG-CTGGATTTCA-CATCGATGACATTTTTG
FD534535       --> ..................................................
FY436442       --> GCTAGCAACTGTTAGTCCAAGGCTGGATTTCAACATCGATGACATTTTTG
FY433250       --> GCTAGCAACTGTTAGTCCAAGGCTGGATTTCAACATCGATGACATTTTTG
FY452299       --> GCTAGCAACTGTTAGTCCAAGGCTGGATTTCAACATCGATGACATTTTTG
FY433292       --> GCTAGCAACTGTTAGTCCAAGGCTGGATTTCAACATCGATGACATTTTTG
FD940834       --> GCTAGCAACTGTTAGTCCAAGGCTGGATTTCAACATCGATGACATTTTTG
EV567122       --> GCTAGCAACTGTTAGTCCAAGGCTGGATTTCAACATCGATGACATTTTTG
EW715894       --> .................................................G

               801    -    851
UN08526        --> CCAAAGAGGTT-GTCTCAGCTCCAATGACGAACTTACCAAACACTGTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571145       <-- CCAAAGAGGTT-GTTTCAGCTCCAATGACGAACTTACCAAACACTGTGAT
EV572117       <-- CCAAAGAGGTT-GTCTCAGCTCCAATGACGAACTTACCAAACACTGTGAT
FD936622       <-- CCAAAGAGGTT-GTTTCAGCTCCAATGACGAACTTACCAAACACTGTGAT
FD530445       <-- CCAAAGAGGTT-GTCTCAGCTCCAATGACGAACTTACCAAACACTGTGAT
EV565903       --> CCAA..............................................
EY897930       --> C.................................................
FD534535       --> ..................................................
FY436442       --> CCAAAGAGGTT-GTCTCAGCTCCAATGACGAACTTACCAAACACTGTGAT
FY433250       --> CCAAAGAGGTT-GTCTCAGCTCCAATGACGAACTTAC-AAACACTGTGAT
FY452299       --> CCAAAGAGGTT-GTCTCAGCTCCAATGACGAACTTACCAAACACTGTGAT
FY433292       --> CCAAAGAGGTT-GTCTCAGCTCCAATGACGAACTTACCAAACACTGTGAT
FD940834       --> CCAAAGAGGTT-GTCTCAGCTCCAATGACGAACTTACCAAACACTGTGAT
EV567122       --> CCAAAGAGGTTTGTCTCAGCTCCAATGACGAACTTACCAAACACTGTGAT
EW715894       --> CCAAAGAGGTT-GTCTCAGCTCCAATGACGAACTTACCAAACACTGTGAT

               851    -    901
UN08526        --> GCCACCTCACATGATGGTGAATTCCGGTTATCCTCATGATATGGTTGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571145       <-- GCCACCTCACATGATGGTGAATTCCGGTTATCCTCATGATATGGTTGATT  Raphanus raphanistrum subsp. landra
EV572117       <-- GCCACCTCACATGATGGTGAATTCCGGTTATCCTCATGATATGGTTGATT  Raphanus raphanistrum subsp. landra
FD936622       <-- GCCACCTCACATGATAGTGAATTCCGGTTATCCTCATGATATGGTTGATT  Raphanus sativus var. oleiformis
FD530445       <-- GCCACCTCACATGATGGTGAATTCCGGTTATCCTCATGATATGGTTGATT  Raphanus raphanistrum subsp. maritimus
EV565903       --> ..................................................  Raphanus raphanistrum subsp. landra
EY897930       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD534535       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY436442       --> GCCACCTCATATGATGGTGAATTCCGGTTATCCTCATG............  Raphanus sativus cv GSK3-1
FY433250       --> GCCACCTCATATGATGGTGAATTCCGGTTATCCTCATG............  Raphanus sativus cv GSK3-1
FY452299       --> GCCACCTCATATGATGGTGAATTCCGGTTATCCTCATGATATGGT.....  Raphanus sativus cv GSK3-1
FY433292       --> GCCACCTCATATGATGGTGAATTCCGGTTATCCTCATGATATGGTTGATT  Raphanus sativus cv GSK3-1
FD940834       --> GCCACCTCACATGATAGTGAATTCCGGTTATCCTCATGATATGGTTGATT  Raphanus sativus var. oleiformis
EV567122       --> GCCACCTCACATGATGGTGAATTCCGGTTATCCTCATGATATGGTTGATT  Raphanus raphanistrum subsp. landra
EW715894       --> GCCACCTCACATTACGGTGAATTCCGGTTATCCTCATGATATGGTTGATT  Raphanus sativus var. oleiformis

               901    -    951
UN08526        --> CCGGTTATGTTCATTTCAATCCAATGCAACAAGTGGTTGCTAGTTCTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571145       <-- TCGGTTATGTTCATTTCAATCCAATGCAACAAGTGGTTGCTAGT--TGAT
EV572117       <-- CCGGTTATGTTCATTTCAATCCAATGCAACAAGTGGTTGCTAGTTCTGAT
FD936622       <-- CCGGTTATGTTCATTTCAATCCAATGCAGCAAGTGGTTGCTAGTTCTGAT
FD530445       <-- CCGGTTATGTTCATTTCAATCCAATGCAACAAGTGGTTGCTAGTTCTGAT
EV565903       --> ..................................................
EY897930       --> ..................................................
FD534535       --> ..................................................
FY436442       --> ..................................................
FY433250       --> ..................................................
FY452299       --> ..................................................
FY433292       --> CCGGTTATGTTCATTTCAATCCCATGCAACAAGTGGTTACTAGTTCTG..
FD940834       --> CCG-TTATGTTCATTTCAATCCAATGCAGCAAGTGGTTGCTAGTTCTGAT
EV567122       --> CCGGTTATGTTCATTTCAATCCAATGCAACAAGTGGTTGCTAGTTCTGAT
EW715894       --> CCGGTTATGTTCATTTCAATCCAATGCAACAAGTGGTTGCTAGTTCTGAT

               951    -   1001
UN08526        --> CCACTGTCATGTTTCAACAATGGTCAATCAGCTGCTACTGTGTGGGACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571145       <-- CCACTGTCATGTTTCAACAATGGTCAATCAGCTGCTACTGTGTGGGACTC
EV572117       <-- CCACTGTCATGTTTCAACAATGGTCAATCAGCTGCTACTGTGTGGGACTT
FD936622       <-- CCACTGTCATGTTTCAACAATGGTCAATCAGCTGCTACTGTGTGGGACTC
FD530445       <-- CCACTGTCATGTTTCAACAATGGTCAATCAGCTGCTACTGTGTGGGACTC
EV565903       --> ..................................................
EY897930       --> ..................................................
FD534535       --> ..................................................
FY436442       --> ..................................................
FY433250       --> ..................................................
FY452299       --> ..................................................
FY433292       --> ..................................................
FD940834       --> CCACTGTCATGTTTCA-CAATGGT..........................
EV567122       --> CCACTGTCATGTTTCAACAATGGTCAATCAGCTGCTACTGTGTGGGACTC
EW715894       --> CCACTGTCATGTTTCAACAATGGTCAATCAGCTGCTACTGTGTGGGACTC

               1001   -   1051
UN08526        --> TGATGTGCAGAATCTTTATAGCAGTCTAGGTGTTTGATTTAAAAGCGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571145       <-- TGATGTGCAGAATCTTTATAGCAGTCTAGGTGTTTGATTTAAAAGCGTTC
EV572117       <-- TGATGTGCAGAATCTTTATAGCAGTCTAGGTGTTTGATTTAAAAGCGTTC
FD936622       <-- TGATGTGCAGAATCTTTATAGCAGTCTAGGTGTTTGATTTAAAAGCGTTC
FD530445       <-- TGATGTGCAGAATCTTTATAGCAGTCTAGGTGTTTGATTTAAAAGCGTTC
EV565903       --> ..................................................
EY897930       --> ..................................................
FD534535       --> ..................................................
FY436442       --> ..................................................
FY433250       --> ..................................................
FY452299       --> ..................................................
FY433292       --> ..................................................
FD940834       --> ..................................................
EV567122       --> TGATGTGCAGAATCTTTATAGCAGTCTAGGTGTTTGATTTAAAAGCGTTC
EW715894       --> TGGTGTGCAGAATCTTTATAGCAGTCTAGGTGTTTGATTTAAAAGCGTTC

               1051   -   1101
UN08526        --> CTTAGTTCTAGACCATTGTCAGGTTCTCTGGATACATGCAGCTTATTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571145       <-- CTTAGTTCTAGACCATTGTCAGGTTCTCTGGATACATGCAGCTTATTTTT
EV572117       <-- CTTAGTTCTAGACCATTGTCAGGTTCTCTGGATACACGCAGCTTATTTTT
FD936622       <-- CTTAGTTCTAGACCATTGTCAGGTTCTCTGGATACATGCAGCTTATTTTT
FD530445       <-- CTTAGTTCTAGACCATTGTCAGGTTCTCTGGATACATGCAGCTTATTTTT
EV565903       --> ..................................................
EY897930       --> ..................................................
FD534535       --> ..................................................
FY436442       --> ..................................................
FY433250       --> ..................................................
FY452299       --> ..................................................
FY433292       --> ..................................................
FD940834       --> ..................................................
EV567122       --> CTTAGTTCTAGACCATTGTCAGGTTCTCTGGATACACGCAGCTTATTTTT
EW715894       --> CTTAGTTCTAGACCATTGTCAGGTTCTCTGGATACATGCAGCTTATTTTT

               1101   -   1151
UN08526        --> TTCAAGTGGGAAGATCAAACTCATATTATTTTCATCAGAAAAGAGAGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571145       <-- TTCAAGTGGGAAGATCAAACTCATATTATTTTCATCAGAAAAGAGAGCAA
EV572117       <-- TTCAAGTGGGAATATCAAACTCATATTATTTTCATCAGAAAAGAGAGCAA
FD936622       <-- TTCAAGTGGGAAGATCAAACTCATATTATTTTCATCAGAAAAGAGAGCAA
FD530445       <-- TTCAAGTGGGAAGATCAAACTCATATTATTTTCATCAGAAAAGAGAGCAA
EV565903       --> ..................................................
EY897930       --> ..................................................
FD534535       --> ..................................................
FY436442       --> ..................................................
FY433250       --> ..................................................
FY452299       --> ..................................................
FY433292       --> ..................................................
FD940834       --> ..................................................
EV567122       --> TTCAAGTGGGAATATCAAACTCATATTATTTTCATCAGAAAAGAGAGCAA
EW715894       --> TTCAAGTGGGAAGATCAAACTCATATTATTTTCATCAGAAAAGAGAGCAA

               1151   -   1201
UN08526        --> AGTTAGCAGTTATTTACTAATTTCAGTAAATTAACTTAAGATTTTCAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571145       <-- AGTTAGCAGTTATTTACTAATTTCAGTAAATTAACTTAAGATTTTCAGCC
EV572117       <-- AGTTAGCAGTTATTTACTAATTTCAGTAAATTAACTTAAGATTTTCAGCC
FD936622       <-- AGTTAGCAGTTATTTACTAATTTCAGTAAATTAACTTAAGATTTTCAGCC
FD530445       <-- AGTTAGCAGTTATTTACTAATTTCAGTAAATTAACTTAAGATTTTCAGCC
EV565903       --> ..................................................
EY897930       --> ..................................................
FD534535       --> ..................................................
FY436442       --> ..................................................
FY433250       --> ..................................................
FY452299       --> ..................................................
FY433292       --> ..................................................
FD940834       --> ..................................................
EV567122       --> AGTTAGCAGTTATTTACTAATTTCAGTAA-TTAACTTAAGATTTTCAGCC
EW715894       --> AGTTAGCAGTTATTTACTAATCTCAGTAAATTAACTTAAGATTTTCAGCC

               1201   -   1251
UN08526        --> CATCATTGTAGTATCAGAGACAAGAGTGTGTATACAGTATTGTGTGTATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571145       <-- CATCATTGTAGTATCAGAGACAAGAGTGTGTATACAGTATTGTGTGTATA
EV572117       <-- CATCATTGTAGTATCAGAGACAAGAGTGTGTATACAGTATTGTGTGTATA
FD936622       <-- CATCATTGTAGTATCAGAGACAAGAGTGTGTATACAGTATTGTGTGTATA
FD530445       <-- CATCATTGTAGTATCAGAGACAAGAGTGTGTATACAGTATTGTGTGTATA
EV565903       --> ..................................................
EY897930       --> ..................................................
FD534535       --> ..................................................
FY436442       --> ..................................................
FY433250       --> ..................................................
FY452299       --> ..................................................
FY433292       --> ..................................................
FD940834       --> ..................................................
EV567122       --> CATCATTGTAGTATCAGAGACA-GAGTGTGTATACAGTATTGTGTGTATA
EW715894       --> CATCATTGTAGTATCAGAGACAAGAGTGTGTATACAGTATTGTGTGTATA

               1251   -   1301
UN08526        --> GATGCCAAACAATAATATCTATTTTTCTTATCATGATTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571145       <-- GATGCCAAACAATA...........................
EV572117       <-- GATGCCAAACAATAATATCTATTTTTCTTATCATG......
FD936622       <-- GATGCCAAACAATA...........................
FD530445       <-- GATGCCAAACAATAATATCTATTTTTCTTATC.........
EV565903       --> .........................................
EY897930       --> .........................................
FD534535       --> .........................................
FY436442       --> .........................................
FY433250       --> .........................................
FY452299       --> .........................................
FY433292       --> .........................................
FD940834       --> .........................................
EV567122       --> GATGCCAAACA-T-ATATCTATTTTTCT-ATCATG......
EW715894       --> GATGCCAAACAATAATATCTATTTTTCTTATCATAATTTTT