1 - 51
UN08649 --> CTCTACTTGTATTCCTCCAACTTCTTTTCATCATCCCACTAGCACTTGGG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571133 <-- ..................................................
FY446043 <-- ..................................................
EY910505 <-- ..................................................
FD967139 <-- ..................................................
FY450541 --> CTCTACTTGTATTCCTCCAACTTCTTTTCATCATCCCACTAGCACTTGGG
FY440114 --> .............CCTCCA-CTTCTTTTCATCATCCCACTAGCACTTGGG
FD970884 --> ..................................................
EY914465 --> ..................................................
EV565890 --> ..................................................
EV524848 --> ..................................................
51 - 101
UN08649 --> TTAAACCACCCAAACTGTGACCTCACCAACACTCAAGACCAAGGCTCTAC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571133 <-- ..................................................
FY446043 <-- ..................................................
EY910505 <-- ..................................................
FD967139 <-- ..................................................
FY450541 --> TTAAACCACCCAAACTGTGACCTCACCAACACTCAAGACCAAGGCTCTAC
FY440114 --> TTAAACCACCCAAACTGTGACCTCACCAACACTCAAGACCAAGGCTCTAC
FD970884 --> ..................................................
EY914465 --> ..................................................
EV565890 --> ..................................................
EV524848 --> ..................................................
101 - 151
UN08649 --> CCTAAGGATCTTCCACATAGACAGCCCTTGCTCACCCTTCAAATCATCAT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571133 <-- ..................................................
FY446043 <-- ..................................................
EY910505 <-- ..................................................
FD967139 <-- ..................................................
FY450541 --> CCTAAGGATCTTCCACATAGACAGCCCTTGCTCACCCTTCAAATCATCAT
FY440114 --> CCTAAGGATCTTCCACATAGACAGCCCTTGCTCACCCTTCAAATCATCAT
FD970884 --> ..................................................
EY914465 --> ..................................................
EV565890 --> ..................................................
EV524848 --> ..................................................
151 - 201
UN08649 --> CCCCTCTCTCATGGGAAGCGCGTGTACTCAAGACTCTGGCCCAAGACCAG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571133 <-- ..................................................
FY446043 <-- ..................................................
EY910505 <-- ..................................................
FD967139 <-- ..................................................
FY450541 --> CCCCTCTCTCATGGGAAGCGCGTGTACTCAAGACTCTGGCCCAAGACCAG
FY440114 --> CCCCTCTCTCATGGGAAGCGCGTGTACTCAAGACTCTGGCCCAAGACCAG
FD970884 --> ..................................................
EY914465 --> ..................................................
EV565890 --> ..................................................
EV524848 --> ..................................................
201 - 251
UN08649 --> GCCCGTCTCCAGTACTTGACAAGCCTCGTCGCTGGGAGATCTGTGGTTCC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571133 <-- ..................................................
FY446043 <-- ..................................................
EY910505 <-- ..................................................
FD967139 <-- ..................................................
FY450541 --> GCCCGTCTCCAGTACTTGACAAGCCTCGTCGCTGGGAGATCTGTGGTTCC
FY440114 --> GCCCGTCTCCAGTACTTGACAAGCCTCGTCGCTGGGAGATCTGTGGTTCC
FD970884 --> ..................................................
EY914465 --> ..................................................
EV565890 --> ..................................................
EV524848 --> ..................................................
251 - 301
UN08649 --> TGTCGCCTCAGGGCGTCAAATGTTGCAGAGCACAACGTACATTGTCAAGG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571133 <-- ..................................................
FY446043 <-- ..................................................
EY910505 <-- ..................................................
FD967139 <-- ..................................................
FY450541 --> TGTCGCCTCAGGGCGTCAAATGTTGCAGAGCACAACGTACATTGTCAAGG
FY440114 --> TGTCGCCTCAGGGCGTCAAATGTTGCAGAGCACAACGTACATTGTCAAGG
FD970884 --> ..................................................
EY914465 --> ..................................................
EV565890 --> ..................................................
EV524848 --> ..................................................
301 - 351
UN08649 --> CTAAGATCGGTACTCCAGCTCAGACTCTACTCTTAGCTATGGACACGAGC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571133 <-- ..................................................
FY446043 <-- ..................................................
EY910505 <-- ..................................................
FD967139 <-- ..................................................
FY450541 --> CTAAGATCGGTACTCCAGCTCAGACTCTACTCTTAGCTATGGACACGAGC
FY440114 --> CTAAGATCGGTACTCCAGCTCAGACTCTACTCTTAGCTATGGACACGAGC
FD970884 --> ..................................................
EY914465 --> ..................................................
EV565890 --> ..................................................
EV524848 --> ..................................................
351 - 401
UN08649 --> AGCGACGTGGCTTGGTTACCTTGCTCCGGCTGCGTTGGCTGTCCTTCAAA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571133 <-- ..................................................
FY446043 <-- ..................................................
EY910505 <-- ..................................................
FD967139 <-- ..................................................
FY450541 --> AGCGACGTGGCTTGGTTACCTTGCTCCGGCTGCGTTGGCTGTCCTTCAAA
FY440114 --> AGCGACGTGGCTTGGTTACCTTGCTCCGGCTGCGTTGGCTGTCCTTCAAA
FD970884 --> ..................................................
EY914465 --> ..................................................
EV565890 --> ..................................................
EV524848 --> ..................................................
401 - 451
UN08649 --> CACCGCCTTTTCTCCGGCCAAGTCCACTACATTCAAGAACGTCAGTTGCG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571133 <-- ..................................................
FY446043 <-- ..................................................
EY910505 <-- ..................................................
FD967139 <-- ..................................................
FY450541 --> CACCGCCTTTTCTCCGGCCAAGTCCACTACATTCAAGAACGTCAGTTGCG
FY440114 --> CACCGCCTTTTCTCCGGCCAAGTCCACTACATTCAAGAACGTCAGTTGCG
FD970884 --> ..................................................
EY914465 --> ..................................................
EV565890 --> ..................................................
EV524848 --> ..................................................
451 - 501
UN08649 --> GTGCTCCTCAGTGTAAGCAGGTACCCAACCCCACGTGCGGATCACGCGCG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571133 <-- ..................................................
FY446043 <-- ..................................................
EY910505 <-- ..................................................
FD967139 <-- ..................................................
FY450541 --> GTGCTCCTCAGTGTAAGCAGGTACCCAACCCCACGTGCGG..........
FY440114 --> GTGCTCCTCAGTGTAAGCAGGTACCCAACCCCACGTGCGGATCACGCGCG
FD970884 --> .....................gACCAAACCCCACGCGCGGATCACGCGCG
EY914465 --> ..................................................
EV565890 --> ..................................................
EV524848 --> ..................................................
501 - 551
UN08649 --> TGCGCTTTCAACCTCACCTACGGAAGCTCCTCCATCGCCGCTAACCTCTC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571133 <-- ..................................................
FY446043 <-- ..................................................
EY910505 <-- ..................................................
FD967139 <-- ..................................................
FY450541 --> ..................................................
FY440114 --> TGCGCTTTCAACCTCACCTACGGAAGCTCCTCCATCGCCGCTAACCTCTC
FD970884 --> TGCGCTTTCAACCTCACCTACGGAAGCTCCTCCATCGCCGCTAACCTCTC
EY914465 --> ..................................................
EV565890 --> ..................................................
EV524848 --> ..................................................
551 - 601
UN08649 --> TCAGGACACCATCCGCCTCGCCGCCGATCCGATCAATGCCTTCACCTTCG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571133 <-- ..................................................
FY446043 <-- ..................................................
EY910505 <-- ..................................................
FD967139 <-- ..................................................
FY450541 --> ..................................................
FY440114 --> TCAGGACACCATCCGCCTCGCCGCCGATCCGATCAATGCCTTCACCTTCG
FD970884 --> TCAGGACACCATCCGCCTCGCCGCCGATCCGATCAATGCCTTCACCTTCG
EY914465 --> ..................................................
EV565890 --> ..................................................
EV524848 --> ..................................................
601 - 651
UN08649 --> GTTGCGTCAACAAGGTCGCCGGCGGAGGAACCATCCCTCCTCCACAAGGC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571133 <-- ..................................................
FY446043 <-- ..................................................
EY910505 <-- ..................................................
FD967139 <-- ..................................................
FY450541 --> ..................................................
FY440114 --> GTTGCGTCAACAAGGTCGCCGGCGGAGGAACCATCCCTCCTCCACAAGGC
FD970884 --> GTTGCGTCAACAAGGTCGCCGGCGGAGGAACCATCCCTCCTCCACAAGGC
EY914465 --> ..................................................
EV565890 --> ..................................................
EV524848 --> ..................................................
651 - 701
UN08649 --> TTATTGGGCCTGGGACGAGGCCCATTATCACTCATGTCGCAGGCTCAGTC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571133 <-- ..................................................
FY446043 <-- ..................................................
EY910505 <-- ..................................................
FD967139 <-- ..................................................
FY450541 --> ..................................................
FY440114 --> TTATTGGGCCTGGGACGAGGCCCATTATCACTCATGTCGCAGGCTCAGTC
FD970884 --> TTATTGGGCCTGGGACGAGGCCCATTATCACTCATGTCGCAGGCTCAGTC
EY914465 --> ..................................................
EV565890 --> ..................................................
EV524848 --> ..................................................
701 - 751
UN08649 --> ACTTTACAAGTCCACGTTCTCCTACTGTTTACCGAGTTTCAGGTCTCTCG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571133 <-- ..................................................
FY446043 <-- ..................................................
EY910505 <-- ..................................................
FD967139 <-- ..................................................
FY450541 --> ..................................................
FY440114 --> ACTTTACAAGTCCACGTTCTCCTACTGTTTACCGAGTTTCAGGTCTCTCG
FD970884 --> ACTTTACAAGTCCACGTTCTCCTACTGTTTACCGAGTTTCAGGTCTCTCG
EY914465 --> ...............................ggGAGTTTCAGGTCTCTCG
EV565890 --> ..................................................
EV524848 --> ..................................................
751 - 801
UN08649 --> CATTCTCTGGATCGCTGAGACTCGGCCCCACCTCCCAGCCCGTGCGCGTG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571133 <-- ..................................................
FY446043 <-- ..................................................
EY910505 <-- ..................................................
FD967139 <-- ..................................................
FY450541 --> ..................................................
FY440114 --> CATTCTCTGGATCGCTGAGACTCGGCCCCACCGCCCAGCCCGTGCGCGTG
FD970884 --> CATTCTCTGGATCACTGAGACTCGGCCCCACCTCCCAGCCCGTGCGCGTG
EY914465 --> CATTCTCTGGATCGCTGAGACTCGGCCCCACCTCCCAGCCCGTGCGCGTG
EV565890 --> gATTCTCTGGATCGCTGAGACTCGGCCCCACCTCCCAGCCAGTGCGCGTG
EV524848 --> ..................................................
801 - 851
UN08649 --> AAGTACACGCAGCTCCTGAGAAACCCGAGGAGGTCTTCTTTGTATTACGT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571133 <-- ..................AGAAACCCGAGGAGGTCTTCTTTGTATTACGT
FY446043 <-- ..................................................
EY910505 <-- ..................................................
FD967139 <-- ..................................................
FY450541 --> ..................................................
FY440114 --> AAGTACACGCAACTCCTGAGAAACCCGAGGAGGTCTTCTTTGTATTACGT
FD970884 --> AAGTACACGCAGCTCCTGAGAAACCCGAGGAGGTCTTCTTTGTATTACGT
EY914465 --> AAGTACACGCAGCTCCTGAGAAACCCGAGGAGGTCTTCTTTGTATTACGT
EV565890 --> AAGTACACGCAGCTCCTGAGAAACCCGAGGAGGTCTTCTTTGTATTACGT
EV524848 --> ..................................................
851 - 901
UN08649 --> CAACCTCGTTGCGATCCGCGTCGCTAAGAAAGTCGTCGATATACCGCCGG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571133 <-- CAACCTCGTTGCGATCCGCGTCGCTAAGAAAGTCGTCAATATACCGCCGG
FY446043 <-- ..................................................
EY910505 <-- ..................................................
FD967139 <-- ..................................................
FY450541 --> ..................................................
FY440114 --> CAACCTTGTTGCGATCCGCGTC............................
FD970884 --> CAACCTCGTTGCGATCCGCGTCGCTAAGAAAGTCGTCGATATACCGCCGG
EY914465 --> CAACCTCGTTGCGATCCGCGTCGCTAAGAAAGTCGTCGATATACCGCCGG
EV565890 --> CAACCTCGTTGCGATCCGCGTCGCTAAGAAAGTCGTCAATATACCGCCGG
EV524848 --> ..................................................
901 - 951
UN08649 --> CAGCTATTGCTTTTAATCCCACCACCGGCGCTGGAACCATCTTTGATTCC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571133 <-- CAGCTATTGCTTTTAATCCCACCACCGGCGCTGGAACCATCTTTGATTCC
FY446043 <-- ...........TTTAATCCCACCACCGGTGCTGGAACCATCTTTGATTCC
EY910505 <-- ....................................CCATCTTTGATTCC
FD967139 <-- ..................................................
FY450541 --> ..................................................
FY440114 --> ..................................................
FD970884 --> CAGCTATTGCTTTTAATCCCATCACCGGCGCTGGAACCATCTTTGATTCC
EY914465 --> CAGCTATTGCTTTTAATCCCACCACCGGCGCTGGAACCATCTTTGATTCC
EV565890 --> CAGCTATTGCTTTTAATCCCACCACCGGCGCTGGAACCATCTTTGATTCC
EV524848 --> ..................................................
951 - 1001
UN08649 --> GGGACTGTCTACACGCGGCTGTCTAAGCCGGTTTACGAGGCGGTGAGGAA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571133 <-- GGGACTGTCTACACGCGGCTGTCTAAGCCGGTTTACGAGGCGGTGAGGAA
FY446043 <-- GGGACTGTCTACACGCGGCTGTCTAAGCCGGTTTACGAGGCGGTGAGGAA
EY910505 <-- GGGACTGTCTACACGCGGCTGTTTAAGCCGGTTTACGAGGCGGTGAGGAA
FD967139 <-- ..................................................
FY450541 --> ..................................................
FY440114 --> ..................................................
FD970884 --> GGGACTGTCTACACGCGGCTGTCTAAGCCGGTTTACGAGGCGGTGAGGAA
EY914465 --> GGGACTGTCTACACGCGGCTGTCTAAGCCGGTTTACGAGGCGGTGAGGAA
EV565890 --> GGGACTGTCTACACGCGGCTGTCTAAGCCGGTTTACGAGGCGGTGAGGAA
EV524848 --> ..................................................
1001 - 1051
UN08649 --> CGAGTTCAGGAAGCGCGTGAAGCCACGTACCGCAGTAGTGACGTCACTGG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571133 <-- CGAGTTCAGGAAGCGCGTGAAGCCACGTACCGCAGTAGTGACGTCACTGG
FY446043 <-- CGAGTTCAGGAAGCGCGTGAAGCCACGTACCGCAGTAGTGACGTCACTGG
EY910505 <-- CGAGTTCAGGAAGCGCGTGAAGCCACGTACCGCAGTAGTGACGTCACTGG
FD967139 <-- ..................................................
FY450541 --> ..................................................
FY440114 --> ..................................................
FD970884 --> CGAGTTCAGGAAGCGCGTGAAGCCACGTACCGCAGTAGTGACGTCACTGG
EY914465 --> CGAGTTCAGGAAGCGCGTGAAGCCACGTACCGCAGTAGTGACGTCACTGG
EV565890 --> CGAGTTCAGGAAGCGCGTGAAGCCACGTACCGCAGTAGTGACGTCACTGG
EV524848 --> ..................................................
1051 - 1101
UN08649 --> GAGGTTTCGACACGTGTTACTCAGGGAAAATCACGGTGCCGACAATAACA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571133 <-- GAGGTTTCGACACGTGTTACTCAGGGAAAATCACGGTGCCGACAATAACA
FY446043 <-- GAGGTTTCGACACGTGTTACTCAGGGAAAATCACGGTGCCGACAATAACA
EY910505 <-- GAGGTTTCGACACGTGTTACTCAGGGAAAATCACGGTGCCGACAATAACA
FD967139 <-- ..................................................
FY450541 --> ..................................................
FY440114 --> ..................................................
FD970884 --> GAGGTTTCGACACGTGTTACTCAGGGAAAATCACGGTGCCGACAATAACA
EY914465 --> GAGGTTTCGACACGTGTTACTCAGGGAAAATCACGGTGCCGACAATAACA
EV565890 --> GAGGTTTCGACACGTGTTACTCAGGGAAAATCACGGTGCCGACAATAACA
EV524848 --> ..................................................
1101 - 1151
UN08649 --> TTCATGTTCAAGGGAGTGAACATGACGATGCCAGCGGATAACCTGATGTT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571133 <-- TTCATGTTCAAGGGAGTGAACATGACGATGCCAGCGGATAACCTGATGTT
FY446043 <-- TTCATGTTCAAGGGAGTGAACATGACGATTCCAGCGGATAACCTGATGTT
EY910505 <-- TTCATGTTCAAGGGAGTGAACATGACGATGCCAGCGGATAACCTGATGTT
FD967139 <-- ..................................................
FY450541 --> ..................................................
FY440114 --> ..................................................
FD970884 --> TTCATGTTCAAGGGAG..................................
EY914465 --> TTCATGTTCAAGGGAGTGAACATGACGATGCCAGCGGATAACCTGATGTT
EV565890 --> TTCATGTTCAAGGGAGTGAACATGACGATGCCAGCGGATAACCTGATGTT
EV524848 --> ..................................................
1151 - 1201
UN08649 --> ACACAGCAGCGCCGGGAGCCTGTCGTGTCTCGCCATTGCGTCGTCGCCGG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571133 <-- ACACAGCAGCGCCGGGAGCCTGTCGTGTCTCGCCATTGCGTCGTCGCCGG
FY446043 <-- ACACAGCAGCGCCGGGAGCCTGTCGTGTCTCGCCATTGCGTCGTCGCCGG
EY910505 <-- ACACAGCAGCGCCGGGAGCCTGTCGTGTCTCGCCATTGCGTCATCGCCGG
FD967139 <-- ...........................................TCGCCGG
FY450541 --> ..................................................
FY440114 --> ..................................................
FD970884 --> ..................................................
EY914465 --> ACACAGCAGCGCCGGGAGCCTGTCGTGTCTCGCCATTGCGTCATCGCCGG
EV565890 --> ACACAGCAGCGCCGGGAGCCTGTCGTGTCTCGCCATTGCGTCGTCGCCGG
EV524848 --> ..................................................
1201 - 1251
UN08649 --> AAAACGTGGACTCTGTCGTCAACGTGATCGCGAGCATGCAGCAGCAGAAC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571133 <-- AAAACGTGGACTCTGTCGTCAACGTGATCGCGAGCATGCAGCAGCAGAAC Raphanus raphanistrum subsp. landra
FY446043 <-- AAAACGTGGACTCTGTCGTCAACGTGATCGCGAGCATGCAGCAGCAGAAC Raphanus sativus cv GSK3-1
EY910505 <-- AAAACGTGAACTCTGTCGTCAACGTGATCGCGAGCATGCAGCAGCAGAAC Raphanus raphanistrum subsp. raphanistrum (NY)
FD967139 <-- AAAACGTGAACTCTGTCGTCAACGTGATAGCGAGCATGCAGCAGCAGAAC Raphanus raphanistrum subsp. raphanistrum (MS)
FY450541 --> .................................................. Raphanus sativus cv GSK3-1
FY440114 --> .................................................. Raphanus sativus cv GSK3-1
FD970884 --> .................................................. Raphanus raphanistrum subsp. raphanistrum (MS)
EY914465 --> AAAACGTGAACTCTGTCGTCAACGTGATCGCGAGCATGCAGCAGCAGAAC Raphanus raphanistrum subsp. raphanistrum (NY)
EV565890 --> AAAACGTGGACTCTGTCGTCAACGTGATCGCGAGCATGCAGCAGCAGAAC Raphanus raphanistrum subsp. landra
EV524848 --> .................................................. Raphanus raphanistrum subsp. maritimus
1251 - 1301
UN08649 --> CATCGTGTCCTGATCGACGTTCCCAATGGACGCTTAGGGTTGGCACGTGA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571133 <-- CATCGTGTCCTGATCGACGTTCCCAATGGACGCTTAGGGTTGGCACGTGA
FY446043 <-- CATCGTGTCCTGATCGACGTTCCCAATGGACGCTTAGGGTTGGCACGTGA
EY910505 <-- CATCGTGTCCTGATCGACGTTCCCAATGGACGCTTAGGGTTGGCACGTGA
FD967139 <-- CATCGTGTCCTGATCGACGTTCCCAATGGACGCTTAGGGTTGGCACGTGA
FY450541 --> ..................................................
FY440114 --> ..................................................
FD970884 --> ..................................................
EY914465 --> CATCGTGTCCTGATCGACGTTCCCAATGGACGCTTAGGGTTGGCACGTGA
EV565890 --> CATCGTGTCCTGATCGACGTTCCCAATGGACGCTTAGGGTTGGCACGTGA
EV524848 --> ..gCGTGTCCTGATCGACGTTCCCAATGGACGCTTAGGGTTGGCACGTGA
1301 - 1351
UN08649 --> ACGATGCTCTTAA-GAAAGATGAATGAGACAATAATTAATTAAGAGCGTA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571133 <-- ACGATGCTCTTAA-GAAAGATGAATGAGACAATAATTAATTAAGAGCGTA
FY446043 <-- ACGATGCTCTTAA-GAAAGATGAATGAGACAATAATTAATTAAGAGCGTA
EY910505 <-- ACGATGCTCTTAATTAAAAATGAATGAGACAATAACTAATTAAGAGCGTA
FD967139 <-- ACGATGCTTTTAA-GAAAGATGAATGAGACAATAATTAATTAAGAGCGTA
FY450541 --> ..................................................
FY440114 --> ..................................................
FD970884 --> ..................................................
EY914465 --> ACGATGCTCTTAATTAAAAATGAATGAGACAATAACTAATTAAGAGCGTA
EV565890 --> ACGATGCTCTTAA-GAAAGATGAATGAGACAATAATTAATTAAGAGCGTA
EV524848 --> ACGATGCTCTTAA-GAAAGATGAATGAGACAATAATTAATTAAGAGCGTA
1351 - 1401
UN08649 --> CTAGTAGTGTTTTGAGCAGAGACTTGTTTGTTTGTGTGTTTTTGTGTGTT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571133 <-- CTAGTAGTGTTTTGAGCAGAGACTTGTTTGTTTGTGTGTTTTTGTGTGTT
FY446043 <-- CTAGTAGTGTTTTGAGCAGAGACTTGTTTGTTTGTGTGTTTTTGTGTGCT
EY910505 <-- CTAGTAGTGTTTTGAGCAGAGACTTGTTTGTTTGTGTGTTTTTGTGTGTT
FD967139 <-- CTAGTAGTGTTTTGAGCAGAGACTTGTTTGTTTGTGTGTTTTTGTGGGTG
FY450541 --> ..................................................
FY440114 --> ..................................................
FD970884 --> ..................................................
EY914465 --> CTAGTAGTGTTTTGAGCAGAGACTTGTTTGTTTGTGTGTTTTTGTGTGTT
EV565890 --> CTAGTAGTGTTTTGAGCAGAGACTTGTTTGTTTGTGTGTTTTTGTGTGTT
EV524848 --> CTAGTAGTGTTT-GAGCAGAGACTTGTTTGTTTGTGTGTTTTTGTGTGTT
1401 - 1451
UN08649 --> TTCGTTTTTGTCTTTCCTCTTTCTGTCTGCTTCACCACCTTCATGTGTTT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571133 <-- TTCGTTTTTGTCTTTCCTCTTTCTGTCTGCTTCACCACCTTCATGTGTTT
FY446043 <-- TTCGTTTTTGTCTTTCCTCTTTCTGTCTGCTTCACCACCTTCATGTGTTT
EY910505 <-- TTCGTTTTTGTCTTTCCTCTTTCTGTCTGCTTCACCACCTTCATGTGTTT
FD967139 <-- TTCGTTTTTGTCTTTCCTCTTTCTGTCTGCTTCACCCCCTCCATGTGTTT
FY450541 --> ..................................................
FY440114 --> ..................................................
FD970884 --> ..................................................
EY914465 --> TTCGTTTT-GTCTTTCCTCTTTCTGTCTGCT-CACCACCTTCATGTGTTT
EV565890 --> TTCGTTTTTGTCTTTCCTCTTTCTGTCTGCTTCACCACCTTCATGTGTTT
EV524848 --> TTCGTTTTTGTCTTTCCTCTTTCTGTCTACTTCACCACCTTCATGTGTTT
1451 - 1501
UN08649 --> GTTAGAGGGCTGTGGTGTGTAGCACTTGTCTTATCAAGTCATTTGTATGT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571133 <-- GTTAGAGGACTGTGGTGTGTAGCACTTGTCTTATCAAGTCATTTGTATGT
FY446043 <-- GTTAGAGGGCGGTGGTGTGTAGCACTTGTCTTATCAAGTCATTTGTATGT
EY910505 <-- GTTAGAGGGCGGTGGTGTGTAGCACTTGTCTTATCAAGTCATTTGTATGT
FD967139 <-- GTTAGAGGGCCGTGGTGTGTAGCACTTGTCTTATCAAGTCATTTGTATGT
FY450541 --> ..................................................
FY440114 --> ..................................................
FD970884 --> ..................................................
EY914465 --> GTaga.............................................
EV565890 --> GTTAGAGGACTGTGGTGTGTAGCACTTGTCTTATCAAGTCATTTGTATGT
EV524848 --> GTTAGAGGGCCGTGGTGTGTAGCACTTGTCTTATCAAGTCATTTGTATGT
1501 - 1551
UN08649 --> GGTTTTAACCTTTGTTAAATTCTCTGGAGACTCGGGTCAAAATTAATAGA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV571133 <-- GGTTTTAACCTTTGTTAAATTCTCTGGAGACTCGGGTCAAAATTAATAGA
FY446043 <-- GGTTTTAA..........................................
EY910505 <-- GGTTTTAACCTTTGTTAAATTCTCTGGAGACTCGGGTCAAAATTAATAGA
FD967139 <-- GGTTTTAACCTTTGTTAAATTCTCTGGAGACTCGGGTCAAAATTAATA..
FY450541 --> ..................................................
FY440114 --> ..................................................
FD970884 --> ..................................................
EY914465 --> ..................................................
EV565890 --> GGTTTTAACCTTTGTTAAATTCTCTGGAGACTCGGGTCAAAATTAATAGA
EV524848 --> GGTTTTAACCTTTGTTAAATTCTCTGGAGACTCGGGTC............
1551 - 1601
UN08649 --> ATAAACTATTACCTAT
~~~~~~~~~~~~~~~~
EV571133 <-- ATAAACTATTACCTAT
FY446043 <-- ................
EY910505 <-- ATAAACTATTACCc..
FD967139 <-- ................
FY450541 --> ................
FY440114 --> ................
FD970884 --> ................
EY914465 --> ................
EV565890 --> ATAAACTATTACCTAT
EV524848 --> ................
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