RadishBase

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Alignment for radish unigene UN08774

               1      -     51
UN08774        --> GGAAGTGCGAAGGACCTTGCGTTTCCTTTGAAATGAAGAAAATTTTATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721299       <-- ..................................................
EV544893       <-- ..................................................
EX760325       <-- ..................................................
EV531067       <-- ..................................................
EX769088       <-- ..................................................
EV545979       <-- ..................................................
EX750834       <-- ..................................................
EW729077       <-- ..................................................
FD566355       <-- ..................................................
FD565129       <-- ..................................................
EY895127       <-- ..................................................
EV543345       <-- ..................................................
FD562448       --> GGAAGTGCGAACCACCTTGCGTTTCCTTTGAAATGAAGAAAATTTTATGG
FD941318       --> ..........AGGACCTTGCGTTTCCTTTGAAATGAAGAAAATTTTATGG
EV526638       --> ...........GGACCTTGCGTTTCCTTTGAAATGAAGAAAATTTTATGG
EV549418       --> ...........GGACCTTGCGTTTCCTTTGAAATGAAGAAAATTTTATGG
EV550749       --> ...........GGACCTTGCGTTTCCTTTGAAATGAAGAAAATTTTATGG
EW717276       --> ...........GGACCTTGCGTTTCCTTTGAAATGAAGAAAATTTTATGG
EW724332       --> ...........GGACCTTGCGTTTCCTTTGAAATGAAGAAAATTTTATGG
EX756536       --> ...........GGACCTTGCGTTTCCTTTGAAATGAAGAAAATTTTATGG
EX765291       --> ...........GGACCTTGCGTTTCCTTTGAAATGAAGAAAATTTTATGG
EY899322       --> ...........GGACCTTGCGTTTCCTTTGAAATGAAGAAAATTTTATGG
EY905367       --> ...........aGACCTTGCGTTTCCTTTGAAATGAAGAAAATTTTATGG
EW714182       --> ..................................................
EV567889       --> ..................................................
EX746425       --> ..................................................
FD569779       --> ..................................................
EV539595       --> ..................................................

               51     -    101
UN08774        --> AGTCTCACTCTTTTTGGTGTCATCTTAATCCTCCCTGTTAATGGGGTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721299       <-- ..................................................
EV544893       <-- ..................................................
EX760325       <-- ..................................................
EV531067       <-- ..................................................
EX769088       <-- ..................................................
EV545979       <-- ..................................................
EX750834       <-- ..................................................
EW729077       <-- ..................................................
FD566355       <-- ..................................................
FD565129       <-- ..................................................
EY895127       <-- ..................................................
EV543345       <-- ..................................................
FD562448       --> AGTCTCACTCTTTTTGGTGTCATCTTAATCCTCCCTGTTAATGGGGTGAT
FD941318       --> AGTCTCACTCTTTTTGGTGTCATCTTAATCCTCCCTGTTAATGGGGTGAT
EV526638       --> AGTCTCACTCTTTTTGGTGTCATCTTAATGCTCCCTGTTAATGGGGTGAT
EV549418       --> AGTCTCACTCTTTTTGGTGTCATCTTAATCCTCCCTGTTAATGGGGTGAT
EV550749       --> AGTCTCACTCTTTTTGGTGTCATCTTAATCCTCCCTGTTAATGGGGTGAT
EW717276       --> AGTCTCACTCTTTTTGGTGTCATCTTAATCCTCCCTGTTAATGGGGTGAT
EW724332       --> AGTCTCACTCTTTTTGGTGTCATCTTAATCCTCCCTGTTAATGGGGTGAT
EX756536       --> AGTCTCACTCTTTTTGGTGTCATCTTAATCCTCCCTGTTAATGGGGTGAT
EX765291       --> AGTCTCACTCTTTTTGGTGTCATCTTAATCCTCCCTGTTAATGGGGTGAT
EY899322       --> AGTCTCACTCTTTTTGGTGTCATCTTAATGCTCCCTGTTAATGGGGTGAT
EY905367       --> AGTCTCACTCTTTTTGGTGTCATCTTAATCCTCCCTGTTAATGGGGTGAT
EW714182       --> ...............GGTGTCATCTTAATCCTCCCTGTTAATGGGGTGAT
EV567889       --> ..................................................
EX746425       --> ..................................................
FD569779       --> ..................................................
EV539595       --> ..................................................

               101    -    151
UN08774        --> GGAGAGGCTCCCAGATTCTAATGGGACAAATGTGTATCAGACCGAAAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721299       <-- ..................................................  Raphanus sativus var. oleiformis
EV544893       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX760325       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV531067       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX769088       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV545979       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX750834       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW729077       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD566355       <-- ..................................................  Raphanus sativus var. oleiformis
FD565129       <-- ..................................................  Raphanus sativus var. oleiformis
EY895127       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV543345       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD562448       --> GGAAAGGCTCCCAGATTCTAATGGGACAAATGTGTATCAGACCGAAAATG  Raphanus sativus var. oleiformis
FD941318       --> GGAAAGGCTCCCAGATTCTAATGGGACAAATGTGTATCAGACCGAAAATG  Raphanus sativus var. oleiformis
EV526638       --> GGAGAGGCTCCCAGATTCTAATGGGACAAATGTGTATCAGACAGAAAATG  Raphanus raphanistrum subsp. maritimus
EV549418       --> GGAGAGGCTCCCAGATTCTAATGGGACAAATGTGTATCAGACAGAAAATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550749       --> GGAGAGGCTCCCAGATTCTAATGGGACAAATGTGTATCAGACAGAAAATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW717276       --> GGAAAGGCTCCCAGATTCTAATGGGACAAATGTGTATCAGACCGAAAATG  Raphanus sativus var. oleiformis
EW724332       --> GGAAAGGCTCCCAGATTCTAATGGGACAAATGTGTATCAGACCGAAAATG  Raphanus sativus cv Early Scarlet Globe
EX756536       --> GGAGAGGCTCCCAGATTCTAATGGGACAAATGTGTATCAGACCGAAAATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX765291       --> GGAGAGGCTCCCAGATTCTAATGGGACAAATGTGTATCAGACAGAAAATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY899322       --> GGAGAGGCTCCCAGATTCTAATGGGACAAATGTGTATCAGACAGAAAATG  Raphanus raphanistrum subsp. maritimus
EY905367       --> GGAGAGGCTCCCAGATTCTAATGGGACAAATGTATATCAGACAGAAAATG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714182       --> GGAAAGGCTCCCAGATTCTAATGGGACAAATGTGTATCAGACCGAAAATG  Raphanus sativus var. oleiformis
EV567889       --> ................................................gG  Raphanus raphanistrum subsp. landra
EX746425       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD569779       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV539595       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               151    -    201
UN08774        --> ATGTCTATTCCAAAGCAAAGCCTACAATGGTAGAACTCACTTTCGTTAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721299       <-- ..................................................
EV544893       <-- ..................................................
EX760325       <-- ..................................................
EV531067       <-- ..................................................
EX769088       <-- ..................................................
EV545979       <-- ..................................................
EX750834       <-- ..................................................
EW729077       <-- ..................................................
FD566355       <-- ..................................................
FD565129       <-- ..................................................
EY895127       <-- ..................................................
EV543345       <-- ..................................................
FD562448       --> ATGTCTATTCCAAAGCAAAGCCTACAATGGTAGAACTCACTTTCGTTAAG
FD941318       --> ATGTCTATTCCAAAGCAAAGCCTACAATGGTAGAACTCACTTTCGTTAAG
EV526638       --> ATGTCTATTCCAAAGCAAAGCCTACAATGGTAGAACTCACTTTCGTTAAG
EV549418       --> ATGTCTATTCCAAAGCAAAGCCTACAATGGTAGAACTCACTTTCGTTAAA
EV550749       --> ATGTCTATTCCAAAGCAAAGCCTACAATGGTAGAACTCACTTTCGTTAAG
EW717276       --> ATGTCTATTCCAAAGCAAAGCCTACAATGGTAGAACTCACTTTCGTTAAG
EW724332       --> ATGTCTATTCCAAAGCAAAGCCTACAATGGTAGAACTCACTTTCGTTAAG
EX756536       --> ATGTCTATTCCAAAGCAAAGCCTACAATGGTAGAACTCACTTTCGTTAAG
EX765291       --> ATGTCTATTCCAAAGCAAAGCCTACAATGGTAGAACTCACTTTCGTTAAA
EY899322       --> ATGTCTATTCCAAAGCAAAGCCTACAATGGTAGAACTCACTTTCGTTAAG
EY905367       --> ATGTCTATTCCAAAGCAAAGCCTACAATGGTAGAACTCACTTTCGTTAAG
EW714182       --> ATGTCTATTCCAAAGCAAAGCCTACAATGGTAGAACTCACTTTCGTTAAG
EV567889       --> ATGTCTATTCCAAAGCAAAGCCTACAATGGTAGAACTCACTTTCGTTAAG
EX746425       --> ..................................................
FD569779       --> ..................................................
EV539595       --> ..................................................

               201    -    251
UN08774        --> AATGCTAATGAGAGATCAGCATTGTGTCTAGATGGAAGTCCTTCCGGATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721299       <-- ..................................................  Raphanus sativus var. oleiformis
EV544893       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX760325       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV531067       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX769088       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV545979       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX750834       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW729077       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD566355       <-- ..................................................  Raphanus sativus var. oleiformis
FD565129       <-- ..................................................  Raphanus sativus var. oleiformis
EY895127       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV543345       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD562448       --> AATCCTAATGAGAGATCAGCATTGTGTCTAGATGGAAGTCCTTCCGGATA  Raphanus sativus var. oleiformis
FD941318       --> AATCCTAATGAGAGATCAGCATTGTGTCTATATGGAAGTCCTTCCGGATA  Raphanus sativus var. oleiformis
EV526638       --> AATGCTAATGAGAGATCAGCATTGTGTCTAGATGGAAGTCCTTCCGGATA  Raphanus raphanistrum subsp. maritimus
EV549418       --> AATGCTAATGAGAGATCAGCATTGTGTCTAGATGGAAGTCCTTCCGGATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550749       --> AATGCTAATGAGAGATCAGCATTGTGTCTAGATGGAAGTCCTTCCGGATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW717276       --> AATCCTAATGAGAGATCAGCATTGTGTCTAGATGGAAGTCCTTCCGGATA  Raphanus sativus var. oleiformis
EW724332       --> AATCCTAATGAGAGATCAGCATTGTGTCTAGATGGAAGTCCTTCCGGATA  Raphanus sativus cv Early Scarlet Globe
EX756536       --> AATGCTAATGAGAGATCAGCATTGTGTCTAGATGGAAGTCCTTCCGGATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX765291       --> AATGCTAATGAGAGATCAGCATTGTGTCTAGATGGAAGTCCTTCCGGATA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY899322       --> AATGCTAATGAGAGATCAGCATTGTGTCTAGATGGAAGTCCTTCCGGATA  Raphanus raphanistrum subsp. maritimus
EY905367       --> AATGCTAATGAGAGATCAGCATTGTGTCTAGATGGAGGTCCTTCCGGATA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714182       --> AATCCTAATGAGAGATCAGCATTGTGTCTAGATGGAAGTCCTTCCGGATA  Raphanus sativus var. oleiformis
EV567889       --> AATCCTAATGAGAGATCAGCATTGTGTCT-GATGGAAGTCCTTCCGGATA  Raphanus raphanistrum subsp. landra
EX746425       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD569779       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV539595       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               251    -    301
UN08774        --> TCATTTTCATCCCGGGTCCGGTTCAGGAGCAAAGAATTGGATCATTCAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721299       <-- ..................................................  Raphanus sativus var. oleiformis
EV544893       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX760325       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV531067       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX769088       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV545979       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX750834       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW729077       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD566355       <-- ..................................................  Raphanus sativus var. oleiformis
FD565129       <-- ..................................................  Raphanus sativus var. oleiformis
EY895127       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV543345       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD562448       --> TCATTTTCATCCCGGGTCCGGTTCGGGAGCAAATAATTGGATCATTCAGT  Raphanus sativus var. oleiformis
FD941318       --> TCATTTTCATCCCGGGTCCGGTTCAGGAGCAAATAATTGGATCATTCAGT  Raphanus sativus var. oleiformis
EV526638       --> TCATGTTCATCCCGGGTCCGGTTCAGGAGCAAAGAATTGGATCATTCAGT  Raphanus raphanistrum subsp. maritimus
EV549418       --> TCATTTTCATCCCGGGTCCGGTTCAGGAGCAAAGAATTGGATCATTCAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550749       --> TCATTTTCATCCCGGGTCCGGTTCAGGAGCAAAGAATTGGATCATTCAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW717276       --> TCATTTTCATCCCGGGTCCGGTTCAGGAGCAAATAATTGGATCATTCAGT  Raphanus sativus var. oleiformis
EW724332       --> TCATTTTCATCCCGGGTCCGGTTCAGGAGCAAATAATTGGATCATTCAGT  Raphanus sativus cv Early Scarlet Globe
EX756536       --> TCATTTTCATCCCGGGTCCGGTTCAGGAGCAAAGAATTGGATCATTCAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX765291       --> TCATTTTCATCCCGGGTCCGGTTCAGGAGCAAAGAATTGGATCATTCAGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY899322       --> TCATGTTCATCCCGGGTCCGGTTCAGGAGCAAAGAATTGGATCATTCAGT  Raphanus raphanistrum subsp. maritimus
EY905367       --> TCATTTTCATCCCGGGTCCGGTTCAGGAGCAAAGAATTGGATCATTTAGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714182       --> TCATTTTCATCCCGGGTCCGGTTCAGGAGCAAATAATTGGATCATTCAGT  Raphanus sativus var. oleiformis
EV567889       --> TCATTTTCATCCCGGGTCCGGTTCAGGAGCAAAGAATTGGGTCATTCAGT  Raphanus raphanistrum subsp. landra
EX746425       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD569779       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV539595       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               301    -    351
UN08774        --> TTGAGGGAGGTGGATGGTGTGGTACCATTGAAGATTGTATAAATATGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721299       <-- ..................................................
EV544893       <-- ..................................................
EX760325       <-- ..................................................
EV531067       <-- ..................................................
EX769088       <-- ..................................................
EV545979       <-- ..................................................
EX750834       <-- ..................................................
EW729077       <-- ..................................................
FD566355       <-- ..................................................
FD565129       <-- ..................................................
EY895127       <-- ..................................................
EV543345       <-- ..................................................
FD562448       --> TTGAGGGAGGTGGATGGTGTGGTACCATTGAAGATTGTATAAATATGAAA
FD941318       --> TTGAGGGAGGTGGATGGTGTGGTACCATTGAAGATTGTATAAATATGAAA
EV526638       --> TTGAGGGAGGTGGATGGTGTGGTACCATTGAAGATTGTATAAATATGAAA
EV549418       --> TTGAGGGAGGTGGATGGTGTGGTACCATTGAAGATTGTATAAATATGAAA
EV550749       --> TTGAGGGAGGTGGATGGTGTGGTACCATTGAAGATTGTATAAATATGAAA
EW717276       --> TTGAGGGAGGTGGATGGTGTGGTACCATTGAAGATTGTATAAATATGAAA
EW724332       --> TTGAGGGAGGTGGATGGTGTGGTACCATTGAAGATTGTATAAATATGAAA
EX756536       --> TTGAGGGAGGTGGATGGTGTGGTACCATTGAAGATTGTATAAATATGAAA
EX765291       --> TTGAGGGAGGTGGATGGTGTGGTACCATTGAAGATTGTATAAATATGAAA
EY899322       --> TTGAGGGAGGTGGATGGTGTGGTACCATTGAAGATTGTATAAATATGAAA
EY905367       --> TTGAGGGAGGTGGATGGTGTGGTACCATTGAAGATTGTATAAATATGAAA
EW714182       --> TTGAGGGAGGTGGATGGTGTGGTACCATTGAAGATTGTATAAATATGAAA
EV567889       --> TTGAGGGAGGTGGATGGTGTGGTACCATTGAAGATTGTATAAATATGAAA
EX746425       --> .......................................gAAATATGAAA
FD569779       --> ..................................................
EV539595       --> ..................................................

               351    -    401
UN08774        --> AAAACTCGTCATGGATCGTCCAAATATATGGAGAAACAGATACCTTTTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721299       <-- ..................................................  Raphanus sativus var. oleiformis
EV544893       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX760325       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV531067       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX769088       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV545979       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX750834       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW729077       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD566355       <-- ..................................................  Raphanus sativus var. oleiformis
FD565129       <-- ..................................................  Raphanus sativus var. oleiformis
EY895127       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV543345       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD562448       --> AAAACTCGTCATGGATCGTCCAAATATATGGAGAAACAGATACCTTTTAC  Raphanus sativus var. oleiformis
FD941318       --> AAAACTCGTCATGGATCGTCCAAATATATGGAGAAACAGATACCTTTTAC  Raphanus sativus var. oleiformis
EV526638       --> AAAACTCGTCATGGATCGTCCAAATATATGGAGAAACAGATACCTTTTAC  Raphanus raphanistrum subsp. maritimus
EV549418       --> AAAACTCGTCATGGGTCGTCCAAATATATGGAGAAACAGATACCTTTTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550749       --> AAAACTCGTCATGGGTCGTCCAAATATATGGAGAAACAGATACCTTTTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW717276       --> AAAACTCGTCATGGATCGTCCAAATATATGGAGAAACAGATACCTTTTAC  Raphanus sativus var. oleiformis
EW724332       --> AAAACTCGTCATGGATCGTCCAAATATATGGAGAAACAGATACCTTTTAC  Raphanus sativus cv Early Scarlet Globe
EX756536       --> AAAACTCGTCATGGGTCGTCCAAATATATGGAGAAACAGATACCTTTTAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX765291       --> AAAACTCGTCATGGGTCGTCCAAATATATGGAGAAACAGATACCTTTTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY899322       --> AAAACTCGTCATGGATCGTCCAAATATATGGAGAAACAGATACCTTTTAC  Raphanus raphanistrum subsp. maritimus
EY905367       --> AAAACTCGTCATGGGTCGTCCAAATATATGGAGAAACAGATACCTTTTAC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714182       --> AAAACTCGTCATGGATCGTCCAAATATATGGAGAAACAGATACCTTTTAC  Raphanus sativus var. oleiformis
EV567889       --> AAAACTCGTCATGGATCGTCCAAATATATGGAGAAACAGATACCTTTTAC  Raphanus raphanistrum subsp. landra
EX746425       --> AAAACTCGTCATGGATCGTCCAAATATATGGAGAAACAGATACCTTTTAC  Raphanus raphanistrum subsp. maritimus
FD569779       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV539595       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               401    -    451
UN08774        --> AGGAATTCTAAGTGACAAAGCCGCGGAAAATCCAGACTTTTATAACTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721299       <-- ..................................................  Raphanus sativus var. oleiformis
EV544893       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX760325       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV531067       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX769088       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV545979       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX750834       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW729077       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD566355       <-- ..................................................  Raphanus sativus var. oleiformis
FD565129       <-- ..................................................  Raphanus sativus var. oleiformis
EY895127       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV543345       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD562448       --> AGGAATTCTAAGTGACAAAGCCGCGCAAAATCCAGACTTTTATAACTGGA  Raphanus sativus var. oleiformis
FD941318       --> AGGAATTCTAAGTGACAAAGCCGCGCAAAATCCAGACTTTTATAACTGGA  Raphanus sativus var. oleiformis
EV526638       --> AGGAATTCTAAGTGACAAAGCCGCGGAAAATCCAGACTTTTATAACTGGA  Raphanus raphanistrum subsp. maritimus
EV549418       --> AGGAATTCTAAGTGACAAAGCCGCGGAAAATCCAGACTTTTATAACTGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550749       --> AGGAATTCTAAGTGACAAAGCCGCGGAAAATCCAGACTTTTATAACTGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW717276       --> AGGAATTCTAAGTGACAAAGCCGCGCAAAATCCAGACTTTTATAACTGGA  Raphanus sativus var. oleiformis
EW724332       --> AGGAATTCTAAGTGACAAAGCCGCGCAAAATCCAGACTTTTATAACTGGA  Raphanus sativus cv Early Scarlet Globe
EX756536       --> AGGAATTCTAAGTGACAAAGCCGCGGAAAATCCAGACTTTTATAACTGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX765291       --> AGGAATTCTAAGTGACAAAGCCGCGGAAAATCCAGACTTTTATAACTGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY899322       --> AGGAATTCTAAGTGACAAAGCCGCGGAAAATCCAGACTTTTATAACTGGA  Raphanus raphanistrum subsp. maritimus
EY905367       --> AGGAATTCTAAGTGACAAAGCCGCGGAAAATCCAGACTTTTATAACTGGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714182       --> AGGAATTCTAAGTGACAAAGCCGCGCAAAATCCAGACTTTTATAACTGGA  Raphanus sativus var. oleiformis
EV567889       --> AGGAATTCTAAGTGACAAAGCCGCGGAAAATCCAGACTTTTATAACTGGA  Raphanus raphanistrum subsp. landra
EX746425       --> AGGAATTCTAAGTGACAAAGCCGCGGAAAATCCAGACTTTTATAACTGGA  Raphanus raphanistrum subsp. maritimus
FD569779       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV539595       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               451    -    501
UN08774        --> ACAGAGTAAAAGTTAGGTCCTGTGATGGTGGATCCTTTATGGGAAGACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721299       <-- .............................................aACAA  Raphanus sativus var. oleiformis
EV544893       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX760325       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV531067       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX769088       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV545979       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX750834       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW729077       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD566355       <-- ..................................................  Raphanus sativus var. oleiformis
FD565129       <-- ..................................................  Raphanus sativus var. oleiformis
EY895127       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV543345       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD562448       --> ACAGAGTAAAAGTTAGGTCCTGTGATGGTGGATCCTTTATGGGAA-ACAA  Raphanus sativus var. oleiformis
FD941318       --> ACAGAGTAAAAGTTAGGTCCTGTGATGGTGGATCCTTTATGGGAA-ACAA  Raphanus sativus var. oleiformis
EV526638       --> ACAGAGTAAAAGTTAGGTCCTGTGATGGCGGATCCTTTATGGGAAGA-AA  Raphanus raphanistrum subsp. maritimus
EV549418       --> ACAGAGTAAAAGTTAGGTCCTGTGATGGTGGATCCTTTATGGGAAGA-AA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550749       --> ACAGAGTAAAAGTTAGGTCCTGTGATGGTGGATCCTTTATGGGAAGA-AA  Raphanus raphanistrum subsp. raphanistrum (NY)
EW717276       --> ACAGAGTAAAAGTTAGGTCCTGTGATGGTGGATCCTTTATGGGAA-ACAA  Raphanus sativus var. oleiformis
EW724332       --> ACAGAGTAAAAGTTAAGTCCTGTGATGGTGGATCCTTTATGGGAA-ACAA  Raphanus sativus cv Early Scarlet Globe
EX756536       --> ACAGAGTAAAAGTTAGGTCCTGTGATGGTGGATCCTTTATGGGAA-ACAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX765291       --> ACAGAGTAAAAGTTAGGTCCTGTGATGGTGGATCCTTTATGGGA......  Raphanus raphanistrum subsp. raphanistrum (NY)
EY899322       --> ACAGAGTAAAAGTTAGGTCCTGTGATGGCGGATCCTTTATGGGAAGA-AA  Raphanus raphanistrum subsp. maritimus
EY905367       --> ACAGAGTAAAAGTTAGGTCCTGTGATGGTGGATCCTTTATGGGAAGA-AA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714182       --> ACAGAGTAAAAGTTAGGTCCTGTGATGGTGGATCCTTTATGGGAA-ACAA  Raphanus sativus var. oleiformis
EV567889       --> CCAGAGTAAAAGTTAGGTCCTGTGATGGCGGATCCTTTATGGGAAGA-AA  Raphanus raphanistrum subsp. landra
EX746425       --> ACAGAGTAAAAGTTAGGTCCTGTGATGGCGGATCCTTTATGGGAAGA-AA  Raphanus raphanistrum subsp. maritimus
FD569779       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV539595       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               501    -    551
UN08774        --> CGAAAATATGGATGCAAAACTTCAGTTTAGAGGAAAGCAAATATGGGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721299       <-- TGAAAATATG-ATGCAAA-CTTCAGTTTAGAGGAA-GCAAATATGGGGAT  Raphanus sativus var. oleiformis
EV544893       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX760325       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EV531067       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX769088       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV545979       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX750834       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW729077       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD566355       <-- ..................................................  Raphanus sativus var. oleiformis
FD565129       <-- ..................................................  Raphanus sativus var. oleiformis
EY895127       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV543345       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD562448       --> TGAAAATATGGATGCAAAACTTCAGTTTAGAGGAAGGCAAATATGGGGAT  Raphanus sativus var. oleiformis
FD941318       --> TGAAAATATGGATGCAAAACTTCAGTTTAGAGGAAGGCAAATATGGGGAT  Raphanus sativus var. oleiformis
EV526638       --> CGAAAATATGGATGCAAAACTTCAGTTTAGAGGAAAGCAAATATGGGGAT  Raphanus raphanistrum subsp. maritimus
EV549418       --> CGAAAATATGGATGCAAAACTTCAGTTTAGAGGAAAGCAAATATGGGGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550749       --> CGAAAATATGGATGCAAAACTTCAGTTTAGAGGAAAGCAAATATGGGGAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EW717276       --> TGAAAATATGGATGCAAAACTTCAGTTTAGAGGAAGGCAAATATGGGGAT  Raphanus sativus var. oleiformis
EW724332       --> TGAAAATATGGATGCAAAACTTCAGTTTAGAGGAAGGCAAATATGGGGAT  Raphanus sativus cv Early Scarlet Globe
EX756536       --> CGAAAATATGGATGCAAAACTTCAGTTTAGAGGAAGGCAAATATGGGGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX765291       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY899322       --> CGAAAATATGGATGCAAAACTTCAGTTTAGAGGAAAGCAAATATGGGGAT  Raphanus raphanistrum subsp. maritimus
EY905367       --> CGAAAATATGGATGCAAAACTTCAGTTTAGAGGAAAGCAAATATGGGGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714182       --> TGAAAATATGGATGCAAAACTTCAGTTTAGAGGAAGGCAAATATGGGGAT  Raphanus sativus var. oleiformis
EV567889       --> CGAAAATATGGATGCAAAACTTCAGTTTAGAGGAAAGCAAATATGGGGAT  Raphanus raphanistrum subsp. landra
EX746425       --> CGAAAATATGGATGCAAAACTTCAGTTTAGAGGAAAGCAAATATGGGGAT  Raphanus raphanistrum subsp. maritimus
FD569779       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV539595       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               551    -    601
UN08774        --> GTATTATGGTAGACTTGATGGAAAACAACAGATTTCGTGAAGCAAAGCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721299       <-- GTAT-AT-GTAGACTTGATGGAAA-CAACAAATTTCGTGAAGCAAAGCAG  Raphanus sativus var. oleiformis
EV544893       <-- .tgTTATGGTAGACTTGATGGAAAACAACAGATTTCGTGAAGCAAAGCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX760325       <-- .......GGTAGACTTGATGGAAAACAACAGATTTCGTGAAGCAAAGCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EV531067       <-- ...........................ACAGATTTCGTGAAGCAAAGCAG  Raphanus raphanistrum subsp. maritimus
EX769088       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV545979       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX750834       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW729077       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD566355       <-- ..................................................  Raphanus sativus var. oleiformis
FD565129       <-- ..................................................  Raphanus sativus var. oleiformis
EY895127       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV543345       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD562448       --> GTATTATGGTAGACTTGATGGAAAACAGCAAATTTCGTGAAGCAAA....  Raphanus sativus var. oleiformis
FD941318       --> GTATTATGGTAGACTTGATGGAAAACAACAAATTTCGTGAAGCAAAGC..  Raphanus sativus var. oleiformis
EV526638       --> GTATTATGGTAGACTTGATGGAAAACAACAGATTTCGTGAAGCAAAGCAG  Raphanus raphanistrum subsp. maritimus
EV549418       --> GTGTTATGGTAGACTTGATGGAAAACAACAGATTTCGTGAAGCAAAGCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550749       --> GTGTTATGGTAGACTTGATGGAAAACAACAGATTTCGTGAAGCAAAGCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW717276       --> GTATTATGGTAGACTTGATGGAAAACAACAAATTTCGTGAAGCAAA....  Raphanus sativus var. oleiformis
EW724332       --> GTATTATGGTAGACTTGATGGAAAACAACAAATTTCGTGAAGCAAAGCAG  Raphanus sativus cv Early Scarlet Globe
EX756536       --> GTATTATGGTAGACTTGATGGAAAACAACAGATTTCGTGAAGCAA-GCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX765291       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY899322       --> GTATTATGGTAGACTTGATGGAAAACAACAGATTTCGTGAAGCAAAGCAG  Raphanus raphanistrum subsp. maritimus
EY905367       --> GTGTTATGGTAGACTTGATGGAAAACAACAGATTTCGTGAAGCAAAGCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714182       --> GTATTATGGTAGACTTGATGGAAAACAACAAATTTCGTGAAGCAAAGCAG  Raphanus sativus var. oleiformis
EV567889       --> GTATTATGGTAGACTTGATGGAAAACAACAGATTTCGTGGTGCAAAGCAG  Raphanus raphanistrum subsp. landra
EX746425       --> GTATTATGGTAGACTTGATGGAAAACAACAGATTTCGTGAAGCAAAGCAG  Raphanus raphanistrum subsp. maritimus
FD569779       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV539595       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)

               601    -    651
UN08774        --> GTTCTGCTTTCTGGATGTTCTTCTGGAGGCCTTGCAGCGATACTTCACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721299       <-- GTTCTGCTTTCTGGATGTTCTTCTGGAGGCCT-GCAGCGATACTTCACTG
EV544893       <-- GTTCTGCTTTCTGGATGTTCTTCTGGAGGCCTTGCAGCGATACTTCACTG
EX760325       <-- GTTCTGCTTTCTGGATGTTCTTCTGGAGGCCTTGCAGCGATACTTCACTG
EV531067       <-- GTTCTGCTTTCTGGATGTTCTTCTGGAGGCCTTGCAGCGATACTTCACTG
EX769088       <-- ....TGCTTTCTGGATGTTCTTCTGGAGGCCTTGCAGCGATACTTCACTG
EV545979       <-- ......................CTGGAGGCCTTGCAGCGATACTTCACTG
EX750834       <-- ..................................................
EW729077       <-- ..................................................
FD566355       <-- ..................................................
FD565129       <-- ..................................................
EY895127       <-- ..................................................
EV543345       <-- ..................................................
FD562448       --> ..................................................
FD941318       --> ..................................................
EV526638       --> GTTCTGCTTTCTGGATGTTCTTCTGGAGGCCTTGCAGCGATACTTCACTG
EV549418       --> GTTCTGCTTTCTGGATGTTCTTCTGGAGGCCTTGCAGCGATACTTCACTG
EV550749       --> GTTCTGCTTTCTGGATGTTCTTCTGGAGGCCTTGCAGCGATACTTCACTG
EW717276       --> ..................................................
EW724332       --> GTTCTGCTTTCTGGATGTTCTTCTGGAGGCCTTGCAGCGATACTTCACTG
EX756536       --> GTTCTGCTTTCTGGATGTTCTTCTGGAGGCCTTGCAGCGATACTTCACTG
EX765291       --> ..................................................
EY899322       --> GTTCTGCTTTCTGGATGTTCTTCTGGAGGCCTTGCAGCGATACTTCACTG
EY905367       --> GTTCTGCTTTCTGGATG.................................
EW714182       --> GTTCTGCTTTCTGGATGTTCTTCTGGAGGCCTTGCAGCGATACTTCACTG
EV567889       --> GTTCTGCTTTCTGGATGTTCTTCTGGAGGCCTTGCAGCGATACTTCACTG
EX746425       --> GTTCTGCTTTCTGGATGTTCTTCTGGAGGCCTTGCAGCGATACTTCACTG
FD569779       --> ..................................................
EV539595       --> ..................................................

               651    -    701
UN08774        --> TGACCAGTTAAAATGGCATTTCCCTAAGGCCAGACTAAAATGTCTGAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721299       <-- TGACAAGTTAAAATGGCATTTCCCTAAGGCCAGACTAAAATGTCTGAGTG
EV544893       <-- TGACCAGTTAAAATGGCATTTCCCTAAGGCCAGACTAAAATGTCTGAGTG
EX760325       <-- TGACCAGTTAAAATGGCATTTCCCTAAGGCCAGACTAAAATGTCTGAGTG
EV531067       <-- TGACCAGTTAAAATGGCATTTCCCTAAGGCCAGACTAAAATGTCTGAGTG
EX769088       <-- TGACCAGTTAAAATGGCATTTCCCTAAGGCCAGACTAAAATGTCTGAGTG
EV545979       <-- TGACCAGTTAAAATGGCATTTCCCTAAGGCCAGACTAAAATGTCTGAGTG
EX750834       <-- ..................................................
EW729077       <-- ..................................................
FD566355       <-- ..................................................
FD565129       <-- ..................................................
EY895127       <-- ..................................................
EV543345       <-- ..................................................
FD562448       --> ..................................................
FD941318       --> ..................................................
EV526638       --> TGACCAGTTAAAATGGCATTTCCCTAAGGCCAGACTAAAATGTCTGAGTG
EV549418       --> TGACCAGTTAAAATGGCATTTCCCTAAAGCCAGACTAAAATGTCTGAGTG
EV550749       --> TGACCAGTTAAAATGGCATTTCCCTAACGCCAGACTAAAATGTCTGAGTG
EW717276       --> ..................................................
EW724332       --> TGACAAGTTAAAATGGCATTTCC...........................
EX756536       --> TGACCAGTTAAAATGGCATTTCCCTAAAGCCAGACTAAAATGTCTGAGTG
EX765291       --> ..................................................
EY899322       --> TGACCAGTTAAAATGGCATTTCCCTAAG-CCAGACTAAAATGTCTGAGTG
EY905367       --> ..................................................
EW714182       --> TGACAAGTTAAAATGGCATTTCCCTAAG-CCAGACTAAAATGTCTGAGTG
EV567889       --> TGACCAGTTAAAATGGCATTTCCCTAAGGCCAGACTAAAATGTCTGAGTG
EX746425       --> TGACCAGTTAAAATGGCATTTCCCTAAGGCCAGACTAAAATGTCTGAGTG
FD569779       --> ..................................................
EV539595       --> ..................................................

               701    -    751
UN08774        --> ATGCTGGCCTTTTCCTTGATGCCCCCGATGTCTCTGGAGATCGACCTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721299       <-- ATGCTGGCCTTTTCCTTGATGCCCCCGATGTCTCTGGAGATCGACCTCTT
EV544893       <-- ATGCTGGCCTTTTCCTTGATGCCCCCGATGTCTCTGGAGATCGACCTCTT
EX760325       <-- ATGCTGGCCTTTTCCTTGATGCCCCCGATGTCTCTGGAGATCGACCTCTT
EV531067       <-- ATGCTGGCCTTTTCCTTGATGCCCCCGATGTCTCTGGAGATCGACCTCTT
EX769088       <-- ATGCTGGCCTTTTCCTTGATGCCCCCGATGTCTCTGGAGATCGACCTCTT
EV545979       <-- ATGCTGGCCTTTTCCTTGATGCCCCCGATGTCTCTGGAGATCGACCTCTT
EX750834       <-- .............CCTTGATGCCCCCGATGTCTCTGGAGATCGACCTCTT
EW729077       <-- ..............................................TCTT
FD566355       <-- ..................................................
FD565129       <-- ..................................................
EY895127       <-- ..................................................
EV543345       <-- ..................................................
FD562448       --> ..................................................
FD941318       --> ..................................................
EV526638       --> ATGCTGGCCTTTTCCTTGATGCCCCCGATGTCTCTGGAGATCGACCTCTT
EV549418       --> ATGCTGGCCTTTTCCTTGATGCCCCCGATGTCTCTGGAGATCGACCTCTT
EV550749       --> ATGCTGGCCTTTTCCTTGATGCCCCCGATGTCTCTGGAGATCGACCTCTT
EW717276       --> ..................................................
EW724332       --> ..................................................
EX756536       --> ATGCTGG...........................................
EX765291       --> ..................................................
EY899322       --> ATGCTGGCCTTTTCCTTGATGCCCC-GATGTCTCTGGAGATCGACCTCTT
EY905367       --> ..................................................
EW714182       --> ATGCTGGCCTTTTCCTTGATGCCCCCGATGTCTCTGGAGATCGACCTCTT
EV567889       --> ATGCTGGCCTTTTCCTTGATGCCCCCGATGTCTCTGGAGATCGACCTCTT
EX746425       --> ATGCTGGCCTTTTCCTTGATGCCCCCGATGTCTCTGGAGATCGACCTCTT
FD569779       --> ..................................................
EV539595       --> ..................................................

               751    -    801
UN08774        --> AGAAATTTATACAGAGATTTAATAGTATTACAGAGTATTACAACACAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721299       <-- AGAAATTTATACAGAGATTTAATAGTATTACAGAGTATTACAACACAGCT
EV544893       <-- AGAAATTTATACAGAGATTTAATAGTATTACAGAGTATTACAACACAGCT
EX760325       <-- AGAAATTTATACAGAGATTTAATAGTATTACAGAGTATTACAACACAGCT
EV531067       <-- AGAAATTTATACAGAGATTTAATAGTATTACAGAGTATTACAACACAGCT
EX769088       <-- AGAAATTTATACAGAGATTTAATAGTATTACAGAGTATTACAACACAGCT
EV545979       <-- AGAAATTTATACAGAGATTTAATAGTATTACAGAGTATTACAACACAGCT
EX750834       <-- AGAAATTTATACAGAGATTTAATAGTATTACAGAGTATTACAACACAGCT
EW729077       <-- AGAAATTTATACAGAGATTTAATAGTATTACAGAGTATTACAACACAGCT
FD566355       <-- ..................................................
FD565129       <-- ..................................................
EY895127       <-- ..................................................
EV543345       <-- ..................................................
FD562448       --> ..................................................
FD941318       --> ..................................................
EV526638       --> AGAAATT...........................................
EV549418       --> AGAA-TTTATACAGAGATTTAATAGTATTACAGAGTATTACAACACAGCT
EV550749       --> AGAAATTTATACAGAGATTTAATAGTATTACAGAGTATTACAACACAGCT
EW717276       --> ..................................................
EW724332       --> ..................................................
EX756536       --> ..................................................
EX765291       --> ..................................................
EY899322       --> AGAA-TTTATACAGAGATT-AATAGTATTACAGAGTATTACGACACAGCT
EY905367       --> ..................................................
EW714182       --> AGAAATTTATACAGAGATTTAATAGTATTACAGAGTATTACAACACAGCT
EV567889       --> AGAAATTTATACAGAGATTTAATAGTATTACAGAGTATTACAACACA...
EX746425       --> AGAAATTTATACAGAGATTTAATAGTATTACAGAGTATTACAACACAGCT
FD569779       --> .................................gGTATTACAACACAGCT
EV539595       --> ..................................................

               801    -    851
UN08774        --> CTCTAACGAATGTTTAAGACGTCTTAATCCAACTTCGTGTTTTTTCGGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721299       <-- CTCTAACGAATGTTTAAGACGTCTTAATCCAACTTCGTGTTTTTTCGGGT
EV544893       <-- CTCTAACGAATGTTTAAGACGTCTTAATCCAACTTCGTGTCTTTTCGGGC
EX760325       <-- CTCTAACGAATGTTTAAGACGTCTTAATCCAACTTCGTGTTTTTTCGGGC
EV531067       <-- CTCCAACGAATGTTTAAGACGTCTTAATCCAACTTCGTGTTTTTTCGGGC
EX769088       <-- CTCTAACGAATGTTTAAGACGTCTTAATCCAACTTCGTGTCTTTTCGGGC
EV545979       <-- CTCTAACGAATGTTTAAGACGTCTTAATCCAACTTCGTGTTTTTTCGGGC
EX750834       <-- CTCCAACGAATGTTTAAGACGTCTTAATCCAACTTCGTGTTTTTTCGGGC
EW729077       <-- CTCTAACGAATGTTTAAGACGTCTTAATCCAACTTCGTGTTTTTTCGGGC
FD566355       <-- .TCTAACGAATGTTTAAGACGTCTTAATCCAACTTCGTGTTTTTTCGGGC
FD565129       <-- .......................................TTTTTTCGGGC
EY895127       <-- ..................................................
EV543345       <-- ..................................................
FD562448       --> ..................................................
FD941318       --> ..................................................
EV526638       --> ..................................................
EV549418       --> CTCTAACGAATGT.....................................
EV550749       --> CTCTAACGAATGTTTAAGACGTCTTAATCCAACTTCGTGTT.........
EW717276       --> ..................................................
EW724332       --> ..................................................
EX756536       --> ..................................................
EX765291       --> ..................................................
EY899322       --> CTC-AACGA-TGTTTAAGAC..............................
EY905367       --> ..................................................
EW714182       --> CTCTAACGAATGTTTAAGACGTCTTAATCCAACT................
EV567889       --> ..................................................
EX746425       --> CTCCAACGAATGTTTAAGACGTCTTAATCCAACTTCGTGTTTTTTCGGGC
FD569779       --> CTCTAACGAATGTTTAAGACGTCTTAATCCAACTTCGTGTTTTTTCGGGC
EV539595       --> ..................................................

               851    -    901
UN08774        --> AAAACCTAATAAACCAAGTCAACACTTCATTGTTTATTCTAAATGCTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721299       <-- AAAACCTAATAAACCAAGTCAACACTTCATTGTTTATTCTAAATGCTGCA
EV544893       <-- AAAACCTAATAAACCAAGTCAACACTTCATTGTTTATTCTAAATGCTGCA
EX760325       <-- AAAACCTAATAAACCAAGTCAACACTTCATTGTTTATTCTAAATGCTGCA
EV531067       <-- AAAACCTTATAAACCAAGTCAACACTTCATTGTTTATTCTAAATGCTGCA
EX769088       <-- AAAACCTAATAAACCAAGTCAACACTTCATTGTTTATTCTAAATGCTGCA
EV545979       <-- AAAACCTAATAAACCAAGTCAACACTTCATTGTTTATTCTAAATGCTGCA
EX750834       <-- AAAACCTTATAAACCAAGTCAACACTTCATTGTTTATTCTAAATGCTGCA
EW729077       <-- AAAACCTAATAAACCAAGTCAACACTTCATTGTTTATTTTAAATGCTGCA
FD566355       <-- AAAACCTAATAAACCAAGTCAACACTTCATTGTTTATTTTAAATGCTGCA
FD565129       <-- AAAACCTAATAAACCAAGTCAACACTTCATTGTTTATTTTAAATGCTGCA
EY895127       <-- ................AGTCAACACTTCATTGTTTATTCTAAATGCTGCA
EV543345       <-- ..................................................
FD562448       --> ..................................................
FD941318       --> ..................................................
EV526638       --> ..................................................
EV549418       --> ..................................................
EV550749       --> ..................................................
EW717276       --> ..................................................
EW724332       --> ..................................................
EX756536       --> ..................................................
EX765291       --> ..................................................
EY899322       --> ..................................................
EY905367       --> ..................................................
EW714182       --> ..................................................
EV567889       --> ..................................................
EX746425       --> AAAACCTTATAAACCAAGTCAACACTTCATTGTTTATTCTAAATGCTGCA
FD569779       --> AAAACCTAATAAACCAAGTCAACACTTCATTGTTTATTCTAAATGCTGCA
EV539595       --> ..................................................

               901    -    951
UN08774        --> TACGATCCGTGGCAGATCCAAGAGAGTTTAACTCCTAAATCTGCAGATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721299       <-- TACGATCCGTGGCAGATCCAAGAGAGTTTAACTCCTAAATCTGCAGATCC
EV544893       <-- TACGATCCGTGGCAGATCCAAGAGAGTTTAACTCCTAAATCTGCAGGTCC
EX760325       <-- TACGATCCGTGGCAGATCCAAGAGAGTTTAACTCCTAAATCTGCAGATCC
EV531067       <-- TACGATCCGTGGCAGATCCAAGAGAGTTTAACTCCTAAATCTGCAGATCC
EX769088       <-- TACGATCCGTGGCAGATCCAAGAGAGTTTAACTCCTAAATCTGCAGGTCC
EV545979       <-- TACGATCCGTGGCAGATCCAAGAGAGTTTAACTCCTAAATCTGCAGATCC
EX750834       <-- TACGATCCGTGGCAGATCCAAGAGAGTTTAACTCGTAAATCTGCGGATCC
EW729077       <-- TACGATCCGTGGCAGATTCAAGAGAGTTTAACTCCTAAATCTGCAGATCC
FD566355       <-- TACGATCCGTGGCAGATCCAAGAGAGTTTAACTCCTAAATCTGCAGATCC
FD565129       <-- TACGATCCGTGGCAGATCCAAGAGAGTTTAACTCCTAAATTTGCAGATCC
EY895127       <-- TACGATCCGTGGCAGATCCAAGAGAGTTTAACTCCTAAATCTGCAGATCC
EV543345       <-- ..................................................
FD562448       --> ..................................................
FD941318       --> ..................................................
EV526638       --> ..................................................
EV549418       --> ..................................................
EV550749       --> ..................................................
EW717276       --> ..................................................
EW724332       --> ..................................................
EX756536       --> ..................................................
EX765291       --> ..................................................
EY899322       --> ..................................................
EY905367       --> ..................................................
EW714182       --> ..................................................
EV567889       --> ..................................................
EX746425       --> TACGATCCGTGGCAGATCCAAGAGAGTTTAACTCGTAAATCTGCGGATCC
FD569779       --> TACGATCCGTGGCAGATCCAAGAGAGTTTAACTCCTAAATCTGCAGATCC
EV539595       --> ..................................................

               951    -   1001
UN08774        --> AAATGGAAGTTGGTCTGACTGTAGACTTAACATCGCAAAGTGCAATGCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721299       <-- AAATGGAAGTTGGTCTGACTGTAGACTTAACATCGCAAAGTGCAATGCAT
EV544893       <-- AAATGGAAGTTGGTCTGACTGTAGACTTAACATCGCAAAGTGCAATGCAT
EX760325       <-- AAATGGAAGTTGGTCTGACTGTAGACTTAACATCGCAAAGTGCAATGCAT
EV531067       <-- AAATGGAAGTAGGTCTGACTGTAGACTTAACATCGCAAAGTGCAATGCAT
EX769088       <-- AAATGGAAGTTGGTCTGACTGTAGACTTAACATCGCAAAGTGCAATGCAT
EV545979       <-- AAATGGAAGTTGGTCTGACTGTAGACTTAACATCGCAAAGTGCAATGCAT
EX750834       <-- AAATGGAAGTTGGTCTGACTGTAGACTTAACATCGCAAAGTGCAATGCAT
EW729077       <-- AAATGGAAGTTGGTCTGACTGTAGACTTAACATCGCAAAGTGCAATGCAT
FD566355       <-- AAATGGAAGTTGGTCTGACTGTAGACTTAACATCGCAAAGTGCAATGCAT
FD565129       <-- AAATGGAAGTTGGTTTGACTGTAGACTTAACATCGCAAAGTGCAATGCAT
EY895127       <-- AAATGGAAGTTGGTCTGACTGTAGACTTAACATCGCAAAGTGCAATGCAT
EV543345       <-- ..................................................
FD562448       --> ..................................................
FD941318       --> ..................................................
EV526638       --> ..................................................
EV549418       --> ..................................................
EV550749       --> ..................................................
EW717276       --> ..................................................
EW724332       --> ..................................................
EX756536       --> ..................................................
EX765291       --> ..................................................
EY899322       --> ..................................................
EY905367       --> ..................................................
EW714182       --> ..................................................
EV567889       --> ..................................................
EX746425       --> AAATGGAAGTTGGTCTGACTGTAGACTTAACATCGCAAAGTGCAATGCAT
FD569779       --> AAATGGAAGTTGGTCTGACTGTAGACTTAACATCGCAAAGTGCAATGCAT
EV539595       --> ..................................................

               1001   -   1051
UN08774        --> CTCAGATCAAGTTCTTGCAAGGTTTCAGGACTCGTATGGTGAATTTGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721299       <-- CTCAGATCAAGTTCTTGCAAGGTTTCAGGACTCGTATGGTGAATTTGATC  Raphanus sativus var. oleiformis
EV544893       <-- CTCAGATCAAGTTCTTGCAAGGTTTCAGAACTCGTATGGTGAATTTGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX760325       <-- CTCAGATCAAGTTCTTGCAAGGTTTCAGGACTCGTATGGTGAATTTGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EV531067       <-- CTCAGATCAAGTTCTTGCAAGGTTTCAGGACTCGTATGGTGAATTTGATC  Raphanus raphanistrum subsp. maritimus
EX769088       <-- CTCAGATCAAGTTCTTGCAAGGTTTCAGAACTCGTATGGTGAATTTGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV545979       <-- CTCAGATCAAGTTCTTGCAAGGTTTCAGAACTCGTATGGTGAATTTGATC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX750834       <-- CTCAGATCAAGTTCTTGCAAGGTTTCAGGACTCGTATG-TGAATTTGATC  Raphanus raphanistrum subsp. maritimus
EW729077       <-- CTCAGATCAAGTTCTTGCAAGGTTTCAGGACTCGTATGGTGAATTTGATC  Raphanus sativus cv Early Scarlet Globe
FD566355       <-- CTCAGATCAAGTTCTTGCAAGGTTTCAGGACTCGTATGGTGAATTTGATC  Raphanus sativus var. oleiformis
FD565129       <-- TTCAGATCAAGTTCTTGCAAGGTTTCAGGACTCGTATGGTGAATTTGATC  Raphanus sativus var. oleiformis
EY895127       <-- CTCAGATCAAGTTCTTGCAAGGTTTCAGGACTCGTATGGTGAATTTGATC  Raphanus raphanistrum subsp. maritimus
EV543345       <-- ...gGATCAAGTTCTTGCAAGGTTTCAGAACTCGTATGGTGAATTTGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD562448       --> ..................................................  Raphanus sativus var. oleiformis
FD941318       --> ..................................................  Raphanus sativus var. oleiformis
EV526638       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EV549418       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550749       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW717276       --> ..................................................  Raphanus sativus var. oleiformis
EW724332       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX756536       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX765291       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY899322       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY905367       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW714182       --> ..................................................  Raphanus sativus var. oleiformis
EV567889       --> ..................................................  Raphanus raphanistrum subsp. landra
EX746425       --> CTCAGATCAAGTTCTTGCAAGGTTTCAG-ACTCGTATG-TGAATTTGATC  Raphanus raphanistrum subsp. maritimus
FD569779       --> CTCAGATCAAGTTCTTGCAAGGTTTCAGGACTCGTATGGTGAATTTGATC  Raphanus sativus cv Early Scarlet Globe
EV539595       --> ...gGATCAAGTTCTTGCAAGGTTTCAGAACTCGTATGGTGAATTTGATC  Raphanus raphanistrum subsp. raphanistrum (MS)

               1051   -   1101
UN08774        --> AGTAGTTTTACAAAGCCAAGTAAGAACGGAGTATTTATTAACTCGTGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721299       <-- AGTAGTTTTACGAAGCCAAGTAAGAACGGAGTATTTATTAACTCGTGCTT
EV544893       <-- AGTAGTTTTACAAAGCCAAGTAAGAACGGAGTATTTATTAACTCGTGCTT
EX760325       <-- AGTGGTTTTACAAAGCCAAGTAAGAACGGAGTATTTATTAACCCGTGCTT
EV531067       <-- AGTGGTTTTACAAAGCCAAGTAAGAACGGAGTATTTATTAACTCGTGCTT
EX769088       <-- AGTAGTTTTACAAAGCCAAGTAAGAACGGAGTATTTATTAACTCGTGCTT
EV545979       <-- AGTAGTTTTACAAAGCCAAGTAAGAACGGAGTATTTATTAACTCGTGCTT
EX750834       <-- AGTTGTTTTACAAAGCCAAGTAAGAACGGAGTATTTATTAACTCGTGCTT
EW729077       <-- AGTAGTTTTACAAAGCCAAGTAAGAACGGAGTATTTATTAACTCGTGCTT
FD566355       <-- AGTAGTTTTACAAAGCCAAGTAAGAACGGAGTATTTATTAACTCGTGCTT
FD565129       <-- AGTAGTTTTACAAAGCCAAGTAAGAACGGAGTATTTATTAACTCGTGCTT
EY895127       <-- AGTGGTTTTACAAAGCCAAGTAAGAACGGAGTATTTATTAACTCGTGCTT
EV543345       <-- AGTAGTTTTACAAAGCCAAGTAAGAACGGAGTATTTATTAACTCGTGCTT
FD562448       --> ..................................................
FD941318       --> ..................................................
EV526638       --> ..................................................
EV549418       --> ..................................................
EV550749       --> ..................................................
EW717276       --> ..................................................
EW724332       --> ..................................................
EX756536       --> ..................................................
EX765291       --> ..................................................
EY899322       --> ..................................................
EY905367       --> ..................................................
EW714182       --> ..................................................
EV567889       --> ..................................................
EX746425       --> AGTTGTTTTACAAAGCCAAGTAAG..........................
FD569779       --> AGTAGTTTTACAAAGCCAAGTAAGAACGGAGTATTTATTAACTCGTGCTT
EV539595       --> AGTAGTTTTACAAAGCCAAGTAAGAACGGAGTATTTATTAACTCGTGCTT

               1101   -   1151
UN08774        --> TACTCATTGCCAAACAGAGAATCATGACACTTGGTATTCCAAAAACTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721299       <-- TACTCATTGCCAAACAGAGAATCATGACACTTGGTATTCCAAAAACTCTC
EV544893       <-- TACTCATTGCCAAACAGAGAATCATGACACTTGGTATTCCAAAAACTCTC
EX760325       <-- TACTCATTGCCAAACAGAGAATCATGACACATGGTATTCCAAAAACTCTC
EV531067       <-- TACTCATTGCCAAACAGAGAATCATGACACTTGGTATTCCAAAAACTCTC
EX769088       <-- TACTCATTGCCAAACAGAGAATCATGACACTTGGTATTCCAAAAACTCTC
EV545979       <-- TACTCATTGCCAAACAGAGAATCATGACACTTGGTATTCCAAAAACTCTC
EX750834       <-- TACTCATTGCCGAACAGAGAATCATGACACTTGGTATTCCAAAAACTCTC
EW729077       <-- TACTCATTGCCAAACAGAGAATCATGACGCTTGGTATTCCAAAAACTCTC
FD566355       <-- TACTCATTGCCAAACAGAGAATCATGACACTTGGTATTCCAAAAACTCTC
FD565129       <-- TACTCATTGCCAAACAGAGAATCATGACACTTGGTATTCCAAAAACTTTC
EY895127       <-- TACTCATTGCCAAACAGAGAATCATGACACTTGGTATTCCAAAAACTCTC
EV543345       <-- TACTCATTGCCAAACAGAGAATCATGACACTTGGTATTCCAAAAACTCTC
FD562448       --> ..................................................
FD941318       --> ..................................................
EV526638       --> ..................................................
EV549418       --> ..................................................
EV550749       --> ..................................................
EW717276       --> ..................................................
EW724332       --> ..................................................
EX756536       --> ..................................................
EX765291       --> ..................................................
EY899322       --> ..................................................
EY905367       --> ..................................................
EW714182       --> ..................................................
EV567889       --> ..................................................
EX746425       --> ..................................................
FD569779       --> TACTCATTGCCAAACAGAGAATCATGACACTTGGTATTCCAAAAACTCTC
EV539595       --> TACTCATTGCCAAACAGAGAATCATGACACTTGGTATTCCAAAAACTCTC

               1151   -   1201
UN08774        --> CTGCTATTAAGAACAAGAGGATTGCAGTAGCTGTGGGAGATTGGTTTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721299       <-- CTGCTATTAAGAACAAGAGGATTGCAGTAGCTGTGGGAGATTGGTTTTTC
EV544893       <-- CTGCTATTAAGAACAAGAGGATTGCAGTAGCTGTGGGAGATTGGTTTTTC
EX760325       <-- CTGCTATTAAGAACAAGAGGATTGCAGTAGCTGTGGGAGATTGGTTTTTC
EV531067       <-- CTGCTATTAAGAACAAGAGGATTGCAGTAGCTGTGGGAGATTGGTTTTTC
EX769088       <-- CTGCTATTAAGAACAAGAGGATTGCAGTAGCTGTGGGAGATTGGTTTTTC
EV545979       <-- CTGCTATTAAGAACAAGAGGATTGCAGTAGCTGTGGGAGATTGGTTTTTC
EX750834       <-- CTGCTATTAAGAACAAGAGGATTGCAGTAGCTGTGGGAGATTGGTTTTTC
EW729077       <-- CTGCTATTAAGAACAAGAGGATTGCAGTAGCTGTGGGAGATTGGTTTTTC
FD566355       <-- CTGCTATTAAGAACAAGAGGATTTCAGTAGCTGTGGGAGATTGGTTTTTC
FD565129       <-- CTGCTATTAAGAACAAGAGGATTGCAGTAGCTGTGGGAGATTGGTTTTTC
EY895127       <-- CTGCTATTAAGAACAAGAGGATTGCAGTAGCTGTGGGAGATTGGTTTTTC
EV543345       <-- CTGCTATTAAGAACAAGAGGATTGCAGTAGCTGTGGGAGATTGGTTTTTC
FD562448       --> ..................................................
FD941318       --> ..................................................
EV526638       --> ..................................................
EV549418       --> ..................................................
EV550749       --> ..................................................
EW717276       --> ..................................................
EW724332       --> ..................................................
EX756536       --> ..................................................
EX765291       --> ..................................................
EY899322       --> ..................................................
EY905367       --> ..................................................
EW714182       --> ..................................................
EV567889       --> ..................................................
EX746425       --> ..................................................
FD569779       --> CTGCTATTAAGAACAAGAGGATTGCAGTAGCTGTGGGAGATTGGTTTTTC
EV539595       --> CTGCTATTAAGAACAAGAGGATTGCAGTAGCTGTGGGAGATTGGTTTTTC

               1201   -   1251
UN08774        --> GAAAGAAGAGGAGCGAAACTCATAGACTGTGCTTATCCCTGTGACAAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721299       <-- GAAAGAAGAGGAGCGAAACTCATAGACTGTGCTTATCCCTGTGACAAGAC
EV544893       <-- GAAAGAAGAGGAGCGAAACTCATAGACTGTG-TTATCCCTGTGACAAGAC
EX760325       <-- GAAAGAAGAGGAGCGAAACTCATAGACTGTGATTATCCCTGTGACAAGAC
EV531067       <-- GAAAGAAGAGGAGCGAAACTCATAGACTGTGCTTATCCCTGTGACAAGAC
EX769088       <-- GAAAGAAGAGGAGCGAAACTCATAGACTGTG-TTATCCCTGTGACAAGAC
EV545979       <-- GAAAGAAGAGGAGCGAAACTCATAGACTGTGCTTATCCCTGTGACAAGAC
EX750834       <-- GAAAGAAGAGGAGCGAAACTCATAGACTGTGCTTATCCCTGTGACAAGAC
EW729077       <-- GAAAGAAGAGGAGCGAAACTCATAGACTGTGCTTATCCCTGTGACAAGAC
FD566355       <-- GAAAGAAGAGGAGCGAAACTCATAGACTGTGCTTATCCCTGTGACAAGAC
FD565129       <-- GAAAGAAGAGGAGGGAAACTCATAGACTGTGCTTATCCCTGTGACAAGAC
EY895127       <-- GAAAGAAGAGGAGCGAAACTCATAGACTGTGCTTATCCCTGTGACAAGAC
EV543345       <-- GAAAGAAGAGGAGCGAAACTCATAGACTGTGCTTATCCCTGTGACAAGAC
FD562448       --> ..................................................
FD941318       --> ..................................................
EV526638       --> ..................................................
EV549418       --> ..................................................
EV550749       --> ..................................................
EW717276       --> ..................................................
EW724332       --> ..................................................
EX756536       --> ..................................................
EX765291       --> ..................................................
EY899322       --> ..................................................
EY905367       --> ..................................................
EW714182       --> ..................................................
EV567889       --> ..................................................
EX746425       --> ..................................................
FD569779       --> GAAAGAAGAGGAGCGAAACTCATAGACTGTGCTTATCCCTGTGACAAGAC
EV539595       --> GAAAGAAGAGGAGCGAAACTCATAGACTGTGCTTATCCCTGTGACAAGAC

               1251   -   1301
UN08774        --> TTGCCGTAATGAAGTTTCCAAATGATAATTTGTTTCTATATATAT--TTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721299       <-- TTGCCGTAATGAAGTTTCCAAATGATAATTTGTTTCTATATATAT--TTT
EV544893       <-- TTGCCGTAATGAAGTTTCCAAATGATAATTTGTTTCTATATATAT--TTT
EX760325       <-- TTGCCGTAATGAAGTTTCCAAATGATAACTTGTTTCTATATATAT--TTT
EV531067       <-- TTGCCGTAATGAAGTTTCCAAATGATAATTTGTTTCTATATATATATTTT
EX769088       <-- TTGCCGTAATGAAGTTTCCAAATGATAATTTGTTTCTATATATAT--TTT
EV545979       <-- TTGCCGTAATGAAGTTTCCAAATGATAATTTGTTTCTATATATAT--TTT
EX750834       <-- TTGCCGTAATGAAGTTTCCAAATGATAATTTGTTTCTATATATAT--TTT
EW729077       <-- TTGCCGTAATGAAGTTTCCAAATGATAATTTGTTTCTATATATAT--TTT
FD566355       <-- TTGCCGTAATGAAGTTCCCAAATGATAATTTGTTTCTATATATAT--TTT
FD565129       <-- TTGCCGTAATGAAGTTTCCAAATGATAATTTGTTTTTATATATAT--TTT
EY895127       <-- TTGCCGTAATGAAGTTTCCAAATGATAATTTGTTTCTATATATAT--TTT
EV543345       <-- TTGCCGTAATGAAGTTTCCAAATGATAATTTGTTTCTATATATAT--TTT
FD562448       --> ..................................................
FD941318       --> ..................................................
EV526638       --> ..................................................
EV549418       --> ..................................................
EV550749       --> ..................................................
EW717276       --> ..................................................
EW724332       --> ..................................................
EX756536       --> ..................................................
EX765291       --> ..................................................
EY899322       --> ..................................................
EY905367       --> ..................................................
EW714182       --> ..................................................
EV567889       --> ..................................................
EX746425       --> ..................................................
FD569779       --> TTGCCGTAATGAAGTTTCCAAATGATAATTTGTTTCTATATATAT--TTT
EV539595       --> TTGCCGTAATGAAGTTTCCAAATGATAATTTGTTTCTATATATAT--TTT

               1301   -   1351
UN08774        --> GGCATTCAAATCCTTTTTGTCATTTTTATTTGCAACAAATAACCAAAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721299       <-- GGCATTCAAATCCTTTTTGTCATTCTTATTTGCAACAAATAACCAAAA..
EV544893       <-- GGCATTCAAATCCTTTTTGTCATTTTTATTTGCAACAAATAACCAAAATA
EX760325       <-- GGCATTCAAATCCTTTTTGTCATTCTTATTTGCAACAAATAACCAAAATA
EV531067       <-- GGCATTCAAATTCTTTTTGTCATTTTTATTTGCAACAAATAACCAAAATA
EX769088       <-- GGCATTCAAATCCTTTTTGTCATTTTTATTTGCAACAAATAACCAAAATA
EV545979       <-- GGCATTCAAATCCTTTTTGTCATTTTTATTTGCAACAAATAACCAAAATA
EX750834       <-- GGCATTCAAATCCTTTTTGTCATTTTTATTTGCAACAAATAACCAAAATA
EW729077       <-- GGCATTCAAATCCTTTTTGTCATTTTTATTTGCAACAAATAACCAAAATA
FD566355       <-- GGCATTCAAATCCTTTTTGTCATTCTTATTTGCAACAAATAACCAAAA..
FD565129       <-- GGCATTCAAATCCTTTTTGTCATTTTTATTTGCAACAAATAACCAAAATA
EY895127       <-- GGCATTCAAATCCTTTTTGTCATTTTTATTTGCAACAAATAACCAAAATA
EV543345       <-- GGCATTCAAATCCTTTTTGTCATTTTTATTTGCAACAAATAACCAAAATA
FD562448       --> ..................................................
FD941318       --> ..................................................
EV526638       --> ..................................................
EV549418       --> ..................................................
EV550749       --> ..................................................
EW717276       --> ..................................................
EW724332       --> ..................................................
EX756536       --> ..................................................
EX765291       --> ..................................................
EY899322       --> ..................................................
EY905367       --> ..................................................
EW714182       --> ..................................................
EV567889       --> ..................................................
EX746425       --> ..................................................
FD569779       --> GGCATTCAAATCCTTTTTGTCATTCTTATTTGCAACAAATAACCAAAATA
EV539595       --> GGCATTCAAATCCTTTTTGTCATTTTTATTTGCAACAAATAACCAAAATA

               1351   -   1401
UN08774        --> AAGGACAATTGCCTAGAACAGTTTAGCTAACTAAATTGGTAGTGTAAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721299       <-- ..................................................
EV544893       <-- AAGGACAATTGCCT....................................
EX760325       <-- AAGGAAAATTGCCT....................................
EV531067       <-- AAGGACAATTGCCT....................................
EX769088       <-- AAGGACAATTGCCT....................................
EV545979       <-- AAGGACAATTGCCTAGAACAGTTTAGCTAACTAAATCGGTAGTGTAAAAT
EX750834       <-- AAGGACAATTGCCTAGAACAGTTTAGCTAACTAAATTGGTAGTGTAAAAT
EW729077       <-- AAGGACAATTGCCc....................................
FD566355       <-- ..................................................
FD565129       <-- AAGGACAATTGCCT....................................
EY895127       <-- AAGGACAATTGCCTAGAACAGTTTAGCTAACTAAATTGGTAGTGTAAAAT
EV543345       <-- AAGGACAATTGCCTAGAACAGTTTAGCTAACTAAATTGGTAGTGTAAAAT
FD562448       --> ..................................................
FD941318       --> ..................................................
EV526638       --> ..................................................
EV549418       --> ..................................................
EV550749       --> ..................................................
EW717276       --> ..................................................
EW724332       --> ..................................................
EX756536       --> ..................................................
EX765291       --> ..................................................
EY899322       --> ..................................................
EY905367       --> ..................................................
EW714182       --> ..................................................
EV567889       --> ..................................................
EX746425       --> ..................................................
FD569779       --> AAGGACAATTGCCTAGAACAGTTTAGCTAACTAAATTGGTAGTGTAAAAT
EV539595       --> AAGGACAATTGCCTAGAACAGTTTAGCTAACTAAATTGGTAGTGTAAAAT

               1401   -   1451
UN08774        --> TAGTATGAACTACTGCTATTTATTGGCGATAAATACAAAAATGTTGTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721299       <-- ..................................................
EV544893       <-- ..................................................
EX760325       <-- ..................................................
EV531067       <-- ..................................................
EX769088       <-- ..................................................
EV545979       <-- TAGTATGAACTACTGCTATTTATTGGCGATAAATACAAAAATGTTGc...
EX750834       <-- TAGTATGAACTACTGCTATTTATTGGCGATAAATACAAAAATGTTGTGAA
EW729077       <-- ..................................................
FD566355       <-- ..................................................
FD565129       <-- ..................................................
EY895127       <-- TAGTATGAACTACTGCTATTTATTGGCGATAAATACAAAAATGTTGTG..
EV543345       <-- TAGTATGAACTACTGCTATTTATTGGCGATAAATACAAAAATGTTGTG..
FD562448       --> ..................................................
FD941318       --> ..................................................
EV526638       --> ..................................................
EV549418       --> ..................................................
EV550749       --> ..................................................
EW717276       --> ..................................................
EW724332       --> ..................................................
EX756536       --> ..................................................
EX765291       --> ..................................................
EY899322       --> ..................................................
EY905367       --> ..................................................
EW714182       --> ..................................................
EV567889       --> ..................................................
EX746425       --> ..................................................
FD569779       --> TAGTATGAACTACTGCTATTTATTGGCGATAAATACAAAA-TGTTGTGA.
EV539595       --> TAGTATGAACTACTGCTATTTATTGGCGATAAATACAAAAATGTTGTG..

               1451   -   1501
UN08774        --> ACAGTGAGTAAAACTTATATTATTCATTAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW721299       <-- ...............................
EV544893       <-- ...............................
EX760325       <-- ...............................
EV531067       <-- ...............................
EX769088       <-- ...............................
EV545979       <-- ...............................
EX750834       <-- ACAGTGAGTAAAACTTATATTATTCATTAGC
EW729077       <-- ...............................
FD566355       <-- ...............................
FD565129       <-- ...............................
EY895127       <-- ...............................
EV543345       <-- ...............................
FD562448       --> ...............................
FD941318       --> ...............................
EV526638       --> ...............................
EV549418       --> ...............................
EV550749       --> ...............................
EW717276       --> ...............................
EW724332       --> ...............................
EX756536       --> ...............................
EX765291       --> ...............................
EY899322       --> ...............................
EY905367       --> ...............................
EW714182       --> ...............................
EV567889       --> ...............................
EX746425       --> ...............................
FD569779       --> ...............................
EV539595       --> ...............................