1      -     51
UN08779        --> AGGGGACACACAAATATCACAAAGCAAGTGCTTGAAAAACACCAAGAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD530712       <-- ...GGACACACAAATATCACAAAGCAAGTGCTTGAAAAACACCAAGAGCA
FD959433       <-- ...GGACACACAAATATCACAAAGCAAGTGCTTGAAAAACACCAAGAGCA
FD983375       <-- ...GGACACACAAATATCACAAAGCAAGTGCTTGAAAAACACCAAGAGCA
FD984189       <-- ...GGACACACAAATATCACAAAGCAAGTGCTTGAAAAACACCAAGAGCA
FD530214       <-- ..................................................
FD961325       <-- ..................................................
FD963005       --> AGGGGACACACAAATATCACAAAGCAAGTGCTTGAAAAACACCAAGAGCA
EX749131       --> ...GGACACACAAATATCACAAAGCAAGTGCTTGAAAAACACCAAGAGCA
FD534909       --> ...GGACACACAAATATCACAAAGCAAGTGCTTGAAAAACACCAAGAGCA
FD963705       --> ...GGACACACAAATATCACAAAGCAAGTGCTTGAAAAACACCAAGAGCA
FD965639       --> ...GGACGCACAAATATCACAAAGCAAGTGCTTGAAAAACACCAAGAGCA
FD987301       --> ...GGACACACAAATATCACAAAGCAAGTGCTTGAAAAACACCAAGAGCA
FD988273       --> ...GGACACACAAATATCACAAAGCAAGTGCTTGAAAAACACCAAGAGCA
EV568213       --> ....GACACACAAATATCACAAAGCAAGTGCTTGAAAAACACCAAGAGCA

               51     -    101
UN08779        --> ACAATGTCGAAAATGTCAAAGGTTTCTTCTTTCTGTTTACTCCTCCTCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD530712       <-- ACAATGTCGAAAATGTCAAAGGTTTCTTCTTTCTGTTTACTCCTCCTCGT  Raphanus raphanistrum subsp. maritimus
FD959433       <-- ACAATGTCGAAAATGTCAAAGGTTTCTTCTTTCTGTTTACTCCTCCTCGT  Raphanus raphanistrum subsp. maritimus
FD983375       <-- ACAATGTCGAAAATCTCAAAGGTTTCTTCTTTCTGTTTACTCCTCCTCGT  Raphanus raphanistrum subsp. landra
FD984189       <-- ACAATGTCGAAAATCTCAAAGGTTTCTTCTTTCTGTTTACTCCTCCTCGT  Raphanus raphanistrum subsp. landra
FD530214       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD961325       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD963005       --> ACAATGTCGAAAATGTCAAAGGTTTCTTCTTTCTGTTTACTCCTCCTCGT  Raphanus raphanistrum subsp. maritimus
EX749131       --> ACAATGTCGAAAATGTCAAAGGTTTCTTCTTTCTGTTTACTCCTCCTCGT  Raphanus raphanistrum subsp. maritimus
FD534909       --> ACAATGTCGAAAATGTCAAAGGTTTCTTCTTTCTGTTTACTCCTCCTCGT  Raphanus raphanistrum subsp. maritimus
FD963705       --> ACAATGTCGAAAATGTCAAAGGTTTCTTCTTTCTGTTTACTCCTCCTCGT  Raphanus raphanistrum subsp. maritimus
FD965639       --> ACAATGTCGAAAATGTCAAAGGTTTCTTCTTTCTGTTTACTCCTCCTCGT  Raphanus raphanistrum subsp. maritimus
FD987301       --> ACAATGTCGAAAATCTCAAAGGTTTCTTCTTTCTGTTTACTCCTCCTCGT  Raphanus raphanistrum subsp. landra
FD988273       --> ACAATGTCGAAAATCTCAAAGGTTTCTTCTTTCTGTTTACTCCTCCTCGT  Raphanus raphanistrum subsp. landra
EV568213       --> ACAATGTCGAAAATCTCAAAGGTTTCTTCTTTCTGTTTACTCCTCCTCGT  Raphanus raphanistrum subsp. landra

               101    -    151
UN08779        --> CGTCTTCTTCGTCCTCAGTTCTCAACCTGCACTCTCACTCCGTGTCCCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD530712       <-- CGTCTTCTTCGTCCTCAGTTCTCAACCTGCACTCTCACTCCGTGTCCCAA
FD959433       <-- CGTCTTCTTCGTCCTCAGTTCTCAACCTGCACTCTCACTCCGTGTCCCAA
FD983375       <-- CGTCTTCTTCGTCCTCAGTTCTCAACCTGCACTCTCACTCCGTGTCCCAA
FD984189       <-- CGTCTTCTTCGTCCTCAGTTCTCAACCTGCACTCTCACTCCGTGTCCCAA
FD530214       <-- ....TTCTTCGTCCTCAGTTCTCAACCTGCACTCTCACTCCGTGTCCCAA
FD961325       <-- ....TTCTTCGTCCTCAGTTCTCAACCTGCACTCTCACTCCGTGTCCCAA
FD963005       --> CGTCTTCTTCGTCCTCAGTTCTCAACCTGCACTCTCACTCCGTGTCCCAA
EX749131       --> CGTCTTCTTCGTCCTCAGTTCTCAACCTGCACTCTCACTCCGTGTCCCAA
FD534909       --> CGTCTTCTTCGTCCTCAGTTCTCAACCTGCACTCTCACTCCGTGTCCCAA
FD963705       --> CGTCTTCTTCGTCCTCAGTTCTCAACCTGCACTCTCACTCCGTGTCCCAA
FD965639       --> CGTCTTCTTCGTCCTCAGTTCTCAACCTGCACTCTCACTCCGTGTCCCAA
FD987301       --> CGTCTTCTTCGTCCTCAGTTCTCAACCTGCACTCTCACTCCGTGTCCCAA
FD988273       --> CGTCTTCTTCGTCCTCAGTTCTCAACCTGCACTCTCACTCCGTGTCCCAA
EV568213       --> CGTCTTCTTCGTCCTCAGTTCTCAACCTGCACTCTCACTCCGTGTCCCAA

               151    -    201
UN08779        --> AACCACAATCAGAAACAGCATCACCTCAAACCATGATCGATGATGATTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD530712       <-- AACCACAATCAGAAACAGCATCACCTCAAACCATGATCGATGATGATTCG
FD959433       <-- AACCACAATCAGAAACAGCATCACCTCAAACCATGATCGATGATGATTCG
FD983375       <-- AACCACAATCAGAAACAGCATCACCTCAAACCATGATCGATGATGATTCG
FD984189       <-- AACCACAATCAGAAACAGCATCACCTCAAACCATGATCGATGATGATTCG
FD530214       <-- AACCACAATCAGAAACAGCATCACCTCAAACCATGATCGATGATGATTCG
FD961325       <-- AACCACAATCAGAAACAGCATCACCTCAAACCATGATCGATGATGATTCG
FD963005       --> AACCACAATCAGAAACAGCATCACCTCAAACCATGATCGATGATGATTCG
EX749131       --> AACCACAATCAGAAACAGCATCACCTCAAACCATGATCGATGATGATTCG
FD534909       --> AACCACAATCAGAAACAGCATCACCTCAAACCATGATCGATGATGATTCG
FD963705       --> AACCACAATCAGAAACAGCATCACCTCAAACCATGATCGATGATGATTCG
FD965639       --> AACCACAATCAGAAACAGCATCACCTCAAACCATGATCGATGATGATTCG
FD987301       --> AACCACAATCAGAAACAGCATCACCTCAAACCATGATCGATGATGATTCG
FD988273       --> AACCACAATCAGAAACAGCATCACCTCAAACCATGATCGATGATGATTCG
EV568213       --> AACCACAATCAGAAACAGCATCACCTCAAACCATGATCGATGATGATTCG

               201    -    251
UN08779        --> TCTCCAATTATGGGAATGATCGACCATGCAAAATCCATGATTGCTGGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD530712       <-- TCTCCAATTATGGGAATGATCGACCATGCAAAATCCATGATTGCTGGATT
FD959433       <-- TCTCCAATTATGGGAATGATCGACCACGCAAAATCCATGATTGCTGGATT
FD983375       <-- TCTCCAATTATGGGAATGATCGACCATGCAAAATCCATGATTGCTGGATT
FD984189       <-- TCTCCAATTATGGGAATGATCGACCATGCAAAATCCATGATTGCTGGATT
FD530214       <-- TCTCCAATTATGGGAATGATCGACCATGCAAAATCCATGATTGCTGGATT
FD961325       <-- TCTCCGATTATGGGAATGATCGACCATGCAAAATCCATGATTGCTGGATT
FD963005       --> TCTCCAATTATGGGAATGATCGACCACGCAAAATCCATGATTGCTGGATT
EX749131       --> TCTCCAATTATGGGAATGATCGACCATGCAAAATCCATGATTGCTGGATT
FD534909       --> TCTCCAATTATGGGAATGATCGACCATGCAAAATCCATGATTGCTGGATT
FD963705       --> TCTCCAATTATGGGAATGATCGACCATGCAAAATCCATGATTGCTGGATT
FD965639       --> TCTCCGATTATGGGAATGATCGACCATGCAAAATCCATGATTGCTGGATT
FD987301       --> TCTCCAATTATGGGAATGATCGACCATGCAAAATCCATGATTGCTGGATT
FD988273       --> TCTCCAATTATGGGAATGATCGACCATGCAAAATCCATGATTGCTGGATT
EV568213       --> TCTCCAATTATGGGAATGATCGACCATGCAAAATCCATGATTGCTGGATT

               251    -    301
UN08779        --> CTTCAGCCACAAGTTTCCATTAATGGGCTGGCCATTCCCCAAGTACCCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD530712       <-- CTTCAGCCACAAGTTTCCATTAATGGGCTGGCCATTCCCCAAGTACCCAC  Raphanus raphanistrum subsp. maritimus
FD959433       <-- CTTCAGCCACAAGTTTCCATTAATGGGCTGGCCATTCCCCAAGTACCCAC  Raphanus raphanistrum subsp. maritimus
FD983375       <-- CTTCAGCCACAAGTTTCCATTAATGGGCTGGCCTTTCCCCAAGTACCCAC  Raphanus raphanistrum subsp. landra
FD984189       <-- CTTCAGCCACAAGTTTCCATTAATGGGCTGGCCTTTCCCCAAGTATCCAC  Raphanus raphanistrum subsp. landra
FD530214       <-- CTTCAGCCACAAGTTTCCATTAATGGGCTGGCCATTCCCCAAGTACCCCC  Raphanus raphanistrum subsp. maritimus
FD961325       <-- CTTCAGCCACAAGTTTCCATTAATGGGCTGGCCATTCCCCAAGTACCCCC  Raphanus raphanistrum subsp. maritimus
FD963005       --> CTTCAGCCACAAGTTTCCATTAATGGGCTGGCCATTCCCCAAGTACCCAC  Raphanus raphanistrum subsp. maritimus
EX749131       --> CTTCAGCCACAAGTTTCCATTAATGGGCTGGCCATTCCCCAAGTACCCAC  Raphanus raphanistrum subsp. maritimus
FD534909       --> CTTCAGCCACAAGTTTCCATTAATGGGCTGGCCATTCCCCAAGTACCCAC  Raphanus raphanistrum subsp. maritimus
FD963705       --> CTTCAGCCACAAGTTTCCATTAATGGGCTGGCCATTCCCCAAGTACCCAC  Raphanus raphanistrum subsp. maritimus
FD965639       --> CTTCAGCCACAAGTTTCCATTAATGGGCTGGCCATTCCCCAAGTACCCAC  Raphanus raphanistrum subsp. maritimus
FD987301       --> CTTCAGCCACAAGTTTCCATTAATGGGCTGGCCTTTCCCCAAGTACCCAC  Raphanus raphanistrum subsp. landra
FD988273       --> CTTCAGCCACAAGTTTCCATTAATGGGCTGGCCTTTCCCCAAGTATCCAC  Raphanus raphanistrum subsp. landra
EV568213       --> CTTCAGCCACAAGTTTCCATTAATGGGCTGGCCt................  Raphanus raphanistrum subsp. landra

               301    -    351
UN08779        --> CTTTCACAATGGTCAACCCTAACATCCCAACAAACCCATCTGGAGCTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD530712       <-- CTTTCACAATGGTCAACCCTAACATCCCAACAAACCCATCTGGAGCTCAA
FD959433       <-- CTTTCACAATGGTCAACCCTAACATCCCAACAAACCCATCTGGAGCTCAA
FD983375       <-- CTTTCACAATGGTCAACCCTAACATCCCAACAAACCCATCTGGAGCTCAA
FD984189       <-- CTTTCACAATGGTCAACCCTAACATCCCAACAAACCCATCTGGAGCTCAA
FD530214       <-- CTTTCACAATGGTCAACCCTAACATCCCAACAAACCCATCTGGAGCTCAA
FD961325       <-- CTTTCACAATGGTCAACCCTAACATCCCAACAAACCCATTTGGAGCTCAA
FD963005       --> CTTTCACAATGGTCAACCCTAACATCCCAACAAACCCATCTGGAGCTCAA
EX749131       --> CTTTCACAATGGTCAACCCTAACATCCCAACAAACCCATCTGGAGCTCAA
FD534909       --> CTTTCACAATGGTCAACCCTAACATCCCAACAAACCCATCTGGAGCTCAA
FD963705       --> CTTTCACAATGGTCAACCCTAACATCCCAACAAGCCCATCTGGAGCTCAA
FD965639       --> CTTTCACAATGGTCAACCCTAACATCCCAACAAACCCATCTGGAGCTCAA
FD987301       --> CTTTCACAATGGTCAACCCTAACATCCCAACAAACCCATCTGGAGCTCAA
FD988273       --> CTTTCACAATGGTCAACCCTAACATCCCAACAAACCCATCTGGAGCTCAA
EV568213       --> ..................................................

               351    -    401
UN08779        --> GAGGAATCAGAGAAACTACCTTCTTCCCCAAGTAATCTTAACAAAGATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD530712       <-- GAGGAATCAGAGAAACTACCTTCTTCCCCAAGTAATCTTAACAAAGATGG
FD959433       <-- GAGGAATCAGAGAAACTACCTTCTTCCCCAAGTAATCTTAACAAAGATGG
FD983375       <-- GAGGAATCAGAGAAACTACCTTCTTCCCCAAGTAATCTTAACAAAGATGG
FD984189       <-- GAGGAATCAGAGAAGCTACCTTCTTCCCCAAGTAATCTTAACAAAGATGG
FD530214       <-- GGGGAATCAGAGAAACTACCTTTTTCCCCAAGTAATTTTAACAAAGATGG
FD961325       <-- GAGGAATCAGAGAAACTACCTTCTTCCCCAAGTAATTTTAACAAAGATGG
FD963005       --> GAGGAATCAGAGAAACTACCTTCTTCCCCAAGTAATCTTAACAAAGATGG
EX749131       --> GAGGAATCAGAGAAACTACCTTCTTCCCCAAGTAATCTTAACAAAGATGG
FD534909       --> GAGGAATCAGAGAAACTACCTTCTTCCCCAAGTAATCTTAACAAAGATGG
FD963705       --> GAGGAATCAGAGAAACTACCTTCTTCCCCAAGTAATCTTAACAAAGATGG
FD965639       --> GAGGAATCAGAGAAACTACCTTCTTCCCCAAGTAATCTTAACAAAGATGG
FD987301       --> GAGGAATCAGAGAAACTACCTTCTTCCCCAAGTAATCTTAACAAAGATGG
FD988273       --> GAGGAATCAGAGAAGCTACCTTCTTCCCCAAGTAATCTTAACAAAGATGG
EV568213       --> ..................................................

               401    -    451
UN08779        --> AGGAAACGCATGAAGACTGAAGTTTTCACTTGTGCTCAAAAACACTTATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD530712       <-- AGGAAACGCATGAAGACTGAAGTTTTCACTTGTGCTCAAAAACACTTATA  Raphanus raphanistrum subsp. maritimus
FD959433       <-- AGGAAACGCATGAAGACTGAAGTTTTCACTTGTGCTCAAAAACACTTATA  Raphanus raphanistrum subsp. maritimus
FD983375       <-- AGGAAACGCATGAAGACTGAAGTTT-CACTCGTGCTCAAAAACACTTATA  Raphanus raphanistrum subsp. landra
FD984189       <-- AGGAAACGCATGAAGAATGAAGTTT-CACTCGTGCTCAAAAACACTTATA  Raphanus raphanistrum subsp. landra
FD530214       <-- AGGAAACGCATGAAGACTGAAGTTTTCACTTGTGTTCAAAAACACTTATA  Raphanus raphanistrum subsp. maritimus
FD961325       <-- AGGAAACGCATGAAGACTGAAGTTTTCACTTGTGCTCAAAAACACTTATA  Raphanus raphanistrum subsp. maritimus
FD963005       --> AGGAAACGCATGAAGACTGAAGTTTTCACTTGTGCTCAAAAACACTTATA  Raphanus raphanistrum subsp. maritimus
EX749131       --> AGGAAACGCATGAAGACTGAAGTTTTCACTTGTGCTCAAAAACACTTATA  Raphanus raphanistrum subsp. maritimus
FD534909       --> AGGAAACGCATGAAGACTGAAGTTTTCACTTGTGCTCAAAAACACTTATA  Raphanus raphanistrum subsp. maritimus
FD963705       --> AGGAAACGCATGAAGACTGAAGTTTTCACTTGTGCTCAAAAACACTTATA  Raphanus raphanistrum subsp. maritimus
FD965639       --> AGGAAACGCATGAAGACTGAAGTTTTCACTTGTGCTCAAAAACACTTATA  Raphanus raphanistrum subsp. maritimus
FD987301       --> AGGAAACGCATGAAGACTGAAGTTT-CACTCGTGCTCAAAAACACTTATA  Raphanus raphanistrum subsp. landra
FD988273       --> AGGAAACGCATGAAGAATGAAGTTT-CACTCGTGCTCAAAAACACTTATA  Raphanus raphanistrum subsp. landra
EV568213       --> ..................................................  Raphanus raphanistrum subsp. landra

               451    -    501
UN08779        --> TGGTTTTATATTTCATCATAAAAAATAAAAATTGTATCTTTAATTGAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD530712       <-- TGGTTTTATATTTCATCATAAAAAATAAAAATTGTATCTTTAATTGAATG
FD959433       <-- TGGTTTTATATTTCATCATAAAAAATAAAAATTGTATCTTTAATTGAATG
FD983375       <-- TGGTTTTATATTTCATCATAAAAAATAAAAATTGTATCTTTAATTGAATG
FD984189       <-- TGGTTTTATATTTCATCATAAAAAATAAAAATTGTATCTTTAATTGAATG
FD530214       <-- TGGTTTTATATTTCATCATAAAAAATAAAAATTGTATCTTTAATTGAATG
FD961325       <-- TGGTTTTATATTTCATCATAAAAAATAAAAATTGTATCTTTAATTGAATG
FD963005       --> TGGTTTTATATTTCATCATAAAAAATAAAAATTGTATCTTTAATTGAATG
EX749131       --> TGGTTTTATATTTCATCATAAAAAATAAAAATTGTATCTTTAATTGAATG
FD534909       --> TGGTTTTATATTTCATCATAAAAAATAAAAATTGTATCTTTAATTGAATG
FD963705       --> TGGTTTTATATTTCATCATAAAAAATAAAAATTGTATCTTTAATTGAATG
FD965639       --> TGGTTTTATATTTCATCATAAAAAATAAAAATTGTATCTTTAATTGAATG
FD987301       --> TGGTTTTATATTTCATCATAAAAAATAAAAATTGTATCTTTAATTGAATG
FD988273       --> TGGTTTTATATTTCATCATAAAAAATAAAAATTGTATCTTTAATTGAATG
EV568213       --> ..................................................

               501    -    551
UN08779        --> GTAAAGAGAAAGAAGATGTTATCTATCTATCTATCAATCAGCTCAAAACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD530712       <-- GTAAAGAGAAAGAAGATGTTATCTATCc......................
FD959433       <-- GTAAAGAGAAAGAAGATGTTATCTATCcg.....................
FD983375       <-- GTAAAGAGATAGAAGATGTTATCT..........................
FD984189       <-- GTAAAGAGAAAGAAGATGTTATCTATCTATCTATCAATCAGCTCAAAACG
FD530214       <-- GTAAAGAGAAAG......................................
FD961325       <-- GTAAAGAGAAAGAAGATGTT..............................
FD963005       --> GTAAAGAGAAAGAAGATGTTATCTATCcg.....................
EX749131       --> GTAAAGAGAAAGAAGATGTTATCTATCT......................
FD534909       --> GTAAAGAGAAAGAAGATGTTATCTATCc......................
FD963705       --> GTAAAGAGAAAGActattatgataca........................
FD965639       --> GTAAAGAGAAAGAAGATGTT..............................
FD987301       --> GTAAAGAGATAGAAGATGTTATCT..........................
FD988273       --> GTAAAGAGAAAGAAGATGTTATCTATCTATCTATCAA.............
EV568213       --> ..................................................

               551    -    601
UN08779        --> ATTTTAGCC
                   ~~~~~~~~~
FD530712       <-- .........
FD959433       <-- .........
FD983375       <-- .........
FD984189       <-- ATTTTAGCC
FD530214       <-- .........
FD961325       <-- .........
FD963005       --> .........
EX749131       --> .........
FD534909       --> .........
FD963705       --> .........
FD965639       --> .........
FD987301       --> .........
FD988273       --> .........
EV568213       --> .........