1      -     51
UN08829        --> CGGTAGAGACGAAAATCAAGCTAAATCCAAAGTTGTGCATAACAAGTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD555984       <-- CGGTAGAGACGAAAATCAAGCTAA-TCCAAAGTTGTGCACAACAAGTTGT
FD568337       <-- .....ggGACGAAAATCAAGCTAAATCCAAAGTTGTGCATAACAAGTTGT
EV528836       <-- ..................AGCTAAATCCAAAGTTGTGCATAACAAGTTGT
EV565352       <-- ..................AGCTAAATCCAAAGTTGTGCATAACAAGTTGT
FD965743       <-- ..................................GTGCATAACAAGTTGT
FD552365       --> CGGTAGAGACGAAAATCAAGCTAAATCCAAAGTTGTGCACAACAAGTTGT
FD572696       --> .....ggGACGAAAATCAAGCTAAATCCAAAGTTGTGCATAACAAGTTGT
EV532719       --> ..................AGCTAAATCCAAAGTTGTGCATAACAAGTTGT
EV570666       --> ..................AGCTAAATCCAAAGTTGTGCATAACAAGTTGT
FD961402       --> ..................................GTGCATAACAAGTTGT

               51     -    101
UN08829        --> AGTAGATAGTACGAATAATCCCAGTTAACATAAAAGGGGAAGAAAACAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD555984       <-- AGTAGATAGTACGAATAATCCCAGTTAACATAAAAGGGGAAGAAAACAAA
FD568337       <-- AGTAGATAGTGCGAATAACCCCAGTTAACATAAAAGGGGAAGAAAACAAA
EV528836       <-- AGTAGATAGTACGAATAATCCCAGTTAACATAAAAGGGGAAGAAAACAAA
EV565352       <-- AGTAGATAGTACGAATAATCCCAGTTAACATAAAAGGGGAAGAAAACAAA
FD965743       <-- AGTAGATAGTACGAATAATCCCAGTTAACATAAAAGGGGAAGAAAACAAA
FD552365       --> AGTAGATAGTACGAATAATCCCAGTTAACATAAAAGGGGAAGAAAACAAA
FD572696       --> AGTAGATAGTGCGAATAATCCCAGTTAACATAAAAGGGGAAGAAAACAAA
EV532719       --> AGTAGATAGTACGAATAATCCCAGTTAACATAAAAGGGGAAGAAAACAAA
EV570666       --> AGTAGATAGTACGAATAATCCCAGTTAACATAAAAGGGGAAGAAAACAAA
FD961402       --> AGTAAATAGTACGAATAATCCCAGTTAACATAAAAGGGGAAGAAAACAAA

               101    -    151
UN08829        --> GCAATAGTGAAACTGTTCTTCTCCCTAAAAACTAGCAGCTAAAAACAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD555984       <-- GCAATAGTGAAACTGTTCTTCTCCCTAAAAGCTAGCAGCTAAAAACAATA
FD568337       <-- GCAATAGTGAAACTGTTCTTCTCCCTAAAAACTAGCAGCTAAAAACAATA
EV528836       <-- GCAATAGTGAAACTGTTCTTCTCCCTAAAAACTAGCAGCTAAAAACAATA
EV565352       <-- GCAATAGTGAAACTGTTCTTCTCCCTAAAAACTAGCAGCTAAAAACAATA
FD965743       <-- GCAATAGTGAAACTGTTCTTCTCCCTAAAAACTAGCAGCTAAAAACAATA
FD552365       --> GCAATAGTGAAACTGTTCTTCTCCCTAAAAGCTAGCAGCTAAAAACAATA
FD572696       --> GCAATAGTGAAACTGTTCTTCTCCCTAAAAACTAGCAGCTAAAAACAATA
EV532719       --> GCAATAGTGAAACTGTTCTTCTCCCTAAAAACTAGCAGCTAAAAACAATA
EV570666       --> GCAATAGTGAAACTGTTCTTCTCCCTAAAAACTAGCAGCTAAAAACAATA
FD961402       --> GCAATAGTGAAACTGTTCTTCTCCCTAAAAACTAGCAGCTAAAAACAATA

               151    -    201
UN08829        --> CAACAGAAGATACTCCATAAGACAAATCGATGATACATCTTCTAATCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD555984       <-- CAACAGAAGATACTCCATAAGACAAATCGATGATACATCTTCTAATCATC
FD568337       <-- CAACAGAAGATACTCCATAAGACAAATCGATGATACATCTTCTAATCATC
EV528836       <-- CAACAGAAGATACTCCATAAGACAAATCGATGATACATCTTCTAATCATC
EV565352       <-- CAACAGAAGATACTCCATAAGACAAATCGATGATACATCTTCTAATCATC
FD965743       <-- CAACAGAAGATACTCCATAAGACAAATCGATGATACATCTTCTAATCATC
FD552365       --> CAACAGAAGATACTCCATAAGACAAATCGATGATACATCTTCTAATCATC
FD572696       --> CAACAGAAGATACTCCATAAGACAAATCGATGATACATCTTCTAATCATC
EV532719       --> CAACAGAAGATACTCCATAAGACAAATCGATGATACATCTTCTAATCATC
EV570666       --> CAACAGAAGATACTCCATAAGACAAATCGATGATACATCTTCTAATCATC
FD961402       --> CAACAGAAGATACTCCATAAGACAAATCGATGATACATCTTCTAATCATC

               201    -    251
UN08829        --> ATCTTCCTCCTCTTCACTTGCGCCTTCGTTGACTTCAGACTTGGACTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD555984       <-- ATCTTCCTCCTCTTCACTTGCGCCTTCGTTGACTTCAGACTTGGACTTGT
FD568337       <-- ATCTTCCTCCTCTTCACTTGCGCCTTCGTTGACTTCAGACTTGGACTTGT
EV528836       <-- ATCTTCCTCCTCTTCACTTGCGCCTTCGTTGACTTCAGACTTGGACTTGT
EV565352       <-- ATCTTCCTCCTCTTCACTTGCGCCTTCGTTGACTTCAGACTTGGACTTGT
FD965743       <-- ATCTTCCTCCTCTTCACTTGCGCCTTCGTTGACTTCAGACTTGGACTTGT
FD552365       --> ATCTTCCTCCTCTTCACTTGCGCCTTCGTTGACTTCAGACTTGGACTTGT
FD572696       --> ATCTTCCTCCTCTTCACTTGCGCCTTCGTTGACTTCAGACTTGGACTTGT
EV532719       --> ATCTTCCTCCTCTTCACTTGCGCCTTCGTTGACTTCAGACTTGGACTTGT
EV570666       --> ATCTTCCTCCTCTTCACTTGCGCCTTCGTTGACTTCAGACTTGGACTTGT
FD961402       --> ATCTTCCTCCTCTTCACTTGCGCCTTCGTTGACTTCAGACTTGGACTTGT

               251    -    301
UN08829        --> CAGAGTCATCATCTCCAGCTGTGCTAGTTCCATTAGCCAATTTCATGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD555984       <-- CAGAGTCATCATCTCCAGCTGTGCTAGTTCCATTAGCCAATTTCATGTTG
FD568337       <-- CAGAGTCATCATCTCCAGCTGTGCTAGTTCCATTAGCCAATTTCATGTTG
EV528836       <-- CAGAGTCATCATCTCCAGCTGTGCTAGTTCCATTAGCCAATTTCATGTTG
EV565352       <-- CAGAGTCATCATCTCCAGCTGTGCTAGTTCCATTAGCCAATTTCATGTTG
FD965743       <-- CAGAGTCATCATCTCCAGCTGTGCTAGTTCCATTAGCCAATTTCATGTTG
FD552365       --> CAGAGTCATCATCTCCAGCTGTGCTAGTTCCATTAGCCAATTTCATGTTG
FD572696       --> CAGAGTCATCATCTCCAGCTGTGCTAGTTCCATTAGCCAATTTCATGTTG
EV532719       --> CAGAGTCATCATCTCCAGCTGTGCTAGTTCCATTAGCCAATTTCATGTTG
EV570666       --> CAGAGTCATCATCTCCAGCTGTGCTAGTTCCATTAGCCAATTTCATGTTG
FD961402       --> CAGAATCATCATCTCCAGCTGTGCTAGTTCCATTAGCCAATTTCATGTTG

               301    -    351
UN08829        --> TATTTTTGCATAGTCTTGGTATATTCACTCTTTTTAGTCTCTGCCTTGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD555984       <-- TATTTTTGCATAGTCTTGGTATATTCACTCTTTTTAGTCTCTGCCTTGGC
FD568337       <-- TATTTTTGCATAGTCTTGGTATATTCACTCTTTTTAGTCTCTGCCTTGGC
EV528836       <-- TATTTTCGCATAGTCTTGGTATATTCACTCTTTTTAGTCTCTGCCTTGGC
EV565352       <-- TATTTTTGCATAGTCTTGGTATATTCACTCTTTTTAGTCTCTGCCTTGGC
FD965743       <-- TATTTTTGCATAGTCTTGGTATATTCACTCTTTTTAGTCTCTGCCTTGGC
FD552365       --> TATTTTTGCATAGTCTTGGTATATTCACTCTTTTTAGTCTCTGCCTTGGC
FD572696       --> TATTTTTGCATAGTCTTGGTATATTCACTCTTTTTAGTCTCTGCCTTGGC
EV532719       --> TATTTTCGCATAGTCTTGGTATATTCACTCTTTTTAGTCTCTGCCTTGGC
EV570666       --> TATTTTTGCATAGTCTTGGTATATTCACTCTTTTTAGTCTCTGCCTTGGC
FD961402       --> TATTTTTGCATAGTCTTGGTATATTCACTCTTTTTAGTCTCTGCCTTGGC

               351    -    401
UN08829        --> TACGAAAGGAGCTTTGTCTTCATCAGTCATGGATTTCCATTTAGCTCCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD555984       <-- TACGAAAGGAGCTTTGTCTTCATCAGTCATGGATTTCCATTTAGCTCCAG
FD568337       <-- TACGAAAGGAGCTTTGTCTTCATCAGTCATGGATTTCCATTTAGCTCCAG
EV528836       <-- TACGAAAGGAGCTTTGTCTTCATCAGTCATGGATTTCCATTTAGCTCCAG
EV565352       <-- TACGAAAGGAGCTTTGGCTTCATCAGTCATGGATTTCCATTTAGCTCCAG
FD965743       <-- TACGAAAGGAGCTTTGTCTTCATCAGTCATGGATTTCCATTTAGCTCCAG
FD552365       --> TACGAAAGGAGCTTTGTCTTCATCAGTCATGGATTTCCATTTAGCTCCAG
FD572696       --> TACGAAAGGAGCTTTGTCTTCATCAGTCATGGATTTCCATTTAGCTCCAG
EV532719       --> TACGAAAGGAGCTTTGTCTTCATCAGTCATGGATTTCCATTTAGCTCCAG
EV570666       --> TACGAAAGGAGCTTTGGCTTCATCAGTCATGGATTTCCATTTAGCTCCAG
FD961402       --> TACGAAAGGAGCTTTGTCTTCATCAGTCATGGATTTCCATTTAGCTCCAG

               401    -    451
UN08829        --> CAGCTTTACCAACAGCTCCGACGGATTTGTTGTCAGGGTTAGCTAGATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD555984       <-- CAGCTTTACCAACAGCTCCGACGGATTTGTTGTCAGGGTTAGCTAGATTG
FD568337       <-- CAGCTTTACCAACAGCTCCGACGGATTTGTTGTCAGGGTTAGCTAGATTG
EV528836       <-- CAGCTTTACCAACAGCTCCGACGGATTTGTTGTCAGGGTTAGCTAGATTG
EV565352       <-- CAGCTTTACCAACAGCTCCGACGGATTTGTTGTCAGGGTTAGCTAGATTG
FD965743       <-- CAGCTTTACCAACAGCTCCGACGGATTTGTTGTCAGGGTTAGCTAGATTG
FD552365       --> CAGCTTTACCAACAGCTCCGACGGATTTGTTGTCAGGGTTAGCTAGATTG
FD572696       --> CAGCTTTACCAACAGCTCCGACGGATTTGTTGTCAGGGTTAGCTAGATTG
EV532719       --> CAGCTTTACCAACAGCTCCGACGGATTTGTTGTCAGGGTTAGCTAGATTG
EV570666       --> CAGCTTTACCAACAGCTCCGACGGATTTGTTGTCAGGGTTAGCTAGATTG
FD961402       --> CAGCTTTACCAACAGCTCCGACGGATTTGTTGTCAGGGTTAGCTAGATTG

               451    -    501
UN08829        --> AACTCCTTGCGGAATCCCTCCAGGAAGACGAAGAAAGCACTAGGAGGCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD555984       <-- AACTCCTTGCGGAATCCCTCCAGGAAGACGAAGAAAGCACTAGGAGGCCT  Raphanus raphanistrum subsp. landra
FD568337       <-- AACTCCTTACGGAATCCCTCCAGGAAGACGAAGAAAGCACTAGGAGGCCT  Raphanus sativus cv Early Scarlet Globe
EV528836       <-- AACTCCTTGCGGAAACCCTCCAGGAAGACGAAGAAAGCACTAGGAGGCCT  Raphanus raphanistrum subsp. maritimus
EV565352       <-- AACTCCTTGCGGAATCCCTCCAGGAAGACGAAGAAAGCACTAGGAGGCCT  Raphanus raphanistrum subsp. landra
FD965743       <-- AACTCCTTGCGGAAACCCTCCAGGAAGACGAAGAAAGCACTAGGAGGCCT  Raphanus raphanistrum subsp. maritimus
FD552365       --> AACTCCTTGCGGAATCCCTCCAGGAAGACGAAGAAAGCACTAGGAGGCCT  Raphanus raphanistrum subsp. landra
FD572696       --> AACTCCTTACGGAATCCCTCCAGGAAGACGAAGAAAGCACTAGGAGGCCT  Raphanus sativus cv Early Scarlet Globe
EV532719       --> AACTCCTTGCGGAAACCCTCCAGGAAGACGAAGAAAGCACTAGGAGGCCT  Raphanus raphanistrum subsp. maritimus
EV570666       --> AACTCCTTGCGGAATCCCTCCAGGAAGACGAAGAAAGCACTAGGAGGCCT  Raphanus raphanistrum subsp. landra
FD961402       --> AACTCCTTGCGGAAACCCTCCAGGA.........................  Raphanus raphanistrum subsp. maritimus

               501    -    551
UN08829        --> CTTAGGCTTGTTAGGATCCTTGGCGGCTTTCTTTCCAGCTTTCTTACCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD555984       <-- CTTAGGCTTGTTAGGATCCTTGGCGGCTTTCTTTCCAGCTTTCTTACCTC
FD568337       <-- CTTAGGCTTGTTAGGATCCTTGGCGGATTTCTTTCCAGCTTTCTTACCTC
EV528836       <-- CTTAGGCTTGTTAGGATCCTTGGCGGCTTTCTTTCCTGCTTTCTTACCTC
EV565352       <-- CTTAGGCTTGTTAGGATCCTTGGCGGCTTTCTTTCCAGCTTTCTTACCTC
FD965743       <-- CTTAGGCTTGTTAGGATCCTTGGCGGCTTTCTTTCCTGCTTTCTTACCTC
FD552365       --> CTTAGGCTTGTTAGGATCCTTGGCGGCTTTCTTTCCAGCTTTCTTACCTC
FD572696       --> CTTAGGCTTGTTAGGATCCTTGGCGGATTTCTTTCCAGCTTTCTTACCTC
EV532719       --> CTTAGGCTTGTTAGGATCCTTGGCGGCTTTCTTTCCTGCTTTCTTACCTC
EV570666       --> CTTAGGCTTGTTAGGATCCTTGGCGGCTTTCTTTCCAGCTTTCTTACCTC
FD961402       --> ..................................................

               551    -    601
UN08829        --> TCGTCTTCAATCTGTCATCAGTGCCCTTCGCTTGAGCTTTGGTTTCACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD555984       <-- TCGTCTTCAATCTGTCATCAGTGCCCTTCGCTTGAGCTTTGGTTTCACCA
FD568337       <-- TCGTCTTCAATCTGTCATCAGTGCCCTTCc....................
EV528836       <-- TCGTCTTCAATCTGTCATCAGTGCCCTTCGCTTGAGCTTTGGTTTCACCA
EV565352       <-- TCGTCTTCAATCTGTCATCAGTGCCCTTCGCTTGAGCTTTGGTTTCACCA
FD965743       <-- TCGTCTTCAATCTGTCATCAGTGCCCTTCGCTTGAGCTTTGGTTTCACCA
FD552365       --> TCGTCTTCAATCTGTCATCAGTGCCCTTCGCTTGAGCTTTGGTTTCACCA
FD572696       --> TCGTCTTCAATCTGTCATCAGTGCCCTTCc....................
EV532719       --> TCGTCTTCAATCTGTCATCAGTGCCCTTCGCTTGAGCTTTGGTTTCACCA
EV570666       --> TCGTCTTCAATCTGTCATCAGTGCCCTTCGCTTGAGCTTTGGTTTCACCA
FD961402       --> ..................................................

               601    -    651
UN08829        --> CCTTTCATCTCCGAGAGATCTGTGAACGTTAGGGTTTTTTTTTATTTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD555984       <-- CCTTTCATCTCCGAGAGATCTGTGAACGTTAGGGTTTTTTTTTATTTTGA  Raphanus raphanistrum subsp. landra
FD568337       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV528836       <-- CCCTTCATCTCCGAGAGATCTGTGAACGTTAGGGTTTT---TTATTTTGA  Raphanus raphanistrum subsp. maritimus
EV565352       <-- CCTTTCATCTCCGAGAGATCTGTGAACGTTAGGGTTTTTTTTTATTTTGG  Raphanus raphanistrum subsp. landra
FD965743       <-- CCTTTCATCTCCGAGAGATCTGTGAACGTTAGGGTTTT---TTATTTTGA  Raphanus raphanistrum subsp. maritimus
FD552365       --> CCTTTCATCTCCGAGAGATCTGTGAACGTTAGGGTTTTTTTTTATTTTGA  Raphanus raphanistrum subsp. landra
FD572696       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EV532719       --> CCCTTCATCTCCGAGAGATCTGTGAACGTTAGGGTTTTTT---ATTTTGA  Raphanus raphanistrum subsp. maritimus
EV570666       --> CCTTTCATCTCCGAGAGATCTGTGAACGTTAGGGTTTTTTTTTATTTTGG  Raphanus raphanistrum subsp. landra
FD961402       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               651    -    701
UN08829        --> CCAGAGAGACGACGATTCAGATTTTTTTTT-CTCTTTCTCCGCTTTTTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD555984       <-- CCAGAGAGACGACGATTCcc..............................
FD568337       <-- ..................................................
EV528836       <-- CCAGAGAGACGACGATTCAGATTTTTTTTT-CTCTTTCTCCGCTTTTTAC
EV565352       <-- CCAGAGAGACGACGATTCcc..............................
FD965743       <-- CCAGAGAGACGACGATTCAGATTTTTTTTTTCTCTTTCTCCGCTTTTTAC
FD552365       --> CCAGAGAGA.........................................
FD572696       --> ..................................................
EV532719       --> CCAGAGAGACGACGATTCAGATTTTTTTTT-CTCTTTCTCCGCTTTTTAC
EV570666       --> CCAGAGAGACGACGATTCcc..............................
FD961402       --> ..................................................

               701    -    751
UN08829        --> CCTTTCCTTTTGATGTCC
                   ~~~~~~~~~~~~~~~~~~
FD555984       <-- ..................
FD568337       <-- ..................
EV528836       <-- CCTTTCC...........
EV565352       <-- ..................
FD965743       <-- CCTTTGTTTTTGATGTCC
FD552365       --> ..................
FD572696       --> ..................
EV532719       --> CCTTTCC...........
EV570666       --> ..................
FD961402       --> ..................