1      -     51
UN08831        --> GGCTCACTAAGATAAAAAAAAAAATCGCAATCGAAAATCGAAACTCATCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531545       <-- GGCTCACTAAGATAAAAAAAAAAATCGCAATCGAAAATCGAAATTCATCG  Raphanus raphanistrum subsp. maritimus
FD555944       <-- ........................ggGCAATCGAAAATCGAAACTCATCG  Raphanus raphanistrum subsp. landra
FD982491       <-- ........................ggGCAATCGAAAATCGAAACTCATCG  Raphanus raphanistrum subsp. landra
EV527245       --> GGCTCACTAAGATAAAAAAAAAAATCGCAATCGAAAATCGAAATTCATCG  Raphanus raphanistrum subsp. maritimus
EX887203       --> GGCTCACTAAGATAAAAAAAAAAATCGCAATCGAAAATCGAAATTCATCG  Raphanus sativus var. oleiformis
FD560372       --> ........................ggGCAATCGAAAATCGAAACTCATCG  Raphanus raphanistrum subsp. landra
FD986203       --> ........................ggGCAATCGAAAATCGAAACTCATCG  Raphanus raphanistrum subsp. landra

               51     -    101
UN08831        --> CCCGAGTCAGATCTA--AAATTCA----ATCTTCAATACAGATCTCAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531545       <-- CC-GAGTCAGATCTATAAAATTCATTCAATCTTCAATCCAGATCTCAAAC  Raphanus raphanistrum subsp. maritimus
FD555944       <-- CCCGAGTCAGATCTA--AAATTCA----ATCTTCAATACAGATCTCAAAC  Raphanus raphanistrum subsp. landra
FD982491       <-- CCCGAGTCAGATCTA--AAATTCA----ATCTTCAATACAGATCTCAAAC  Raphanus raphanistrum subsp. landra
EV527245       --> CC-GAGTCAGATCTATAAAATTCATTCAATCTTCAATCCAGATCTCAAAC  Raphanus raphanistrum subsp. maritimus
EX887203       --> CC-GAGTCAGATCTATAAAATTCATTCAATCTTCAATCCAGATCTCAAAC  Raphanus sativus var. oleiformis
FD560372       --> CCCGAGTCAGATCTA--AAATTCA----ATCTTCAATACAGATCTCAAAC  Raphanus raphanistrum subsp. landra
FD986203       --> CCCGAGTCAGATCTA--AAATTCA----ATCTTCAATACAGATCTCAAAC  Raphanus raphanistrum subsp. landra

               101    -    151
UN08831        --> CGTCCCAATGGCTCTCGAATGGGTTGTCTTAGGCTACGCGGCGGCCGCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531545       <-- CGTCCCAATGGCTCTCGAATGGGTTGTCTTAGGCTACGCGGCGGCCGCGG
FD555944       <-- CGTCCCAATGGCTCTCGAATGGGTTGTCTTAGGCTACGCGGCGGCCGCGG
FD982491       <-- CGTCCCAATGGCTCTCGAATGGGTTGTCTTAGGCTACGCGGCGGCCGCGG
EV527245       --> CGTCCCAATGGCTCTCGAATGGGTTGTCTTAGGCTACGCGGCGGCCGCGG
EX887203       --> CGTCCCAATGGCTCTCGAATGGGTTGTCTTAGGCTACGCGGCGGCCGCGG
FD560372       --> CGTCCCAATGGCTCTCGAATGGGTTGTCTTAGGCTACGCGGCGGCCGCGG
FD986203       --> CGTCCCAATGGCTCTCGAATGGGTTGTCTTAGGCTACGCGGCGGCCGCGG

               151    -    201
UN08831        --> AAGCGATCATGGTCATCCTCCTAACCATGCCTGGCCTCGACGCCCTCCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531545       <-- AAGCGATCATGGTCATCCTCCTAACCATGCCTGGCCTCGACGCCCTCCGC
FD555944       <-- AAGCGATCATGGTCATCCTCCTAACCATGCCTGGCCTCGACGCCCTCCGC
FD982491       <-- AAGCGATCATGGTCATCCTCCTAACCATGCCTGGCCTCGACGCCCTCCGC
EV527245       --> AAGCGATCATGGTCATCCTCCTAACCATGCCTGGCCTCGACGCCCTCCGC
EX887203       --> AAGCGATCATGGTCATCCTCCTAACCATGCCTGGCCTCGACGCCCTCCGC
FD560372       --> AAGCGATCATGGTCATCCTCCTAACCATGCCTGGCCTCGACGCCCTCCGC
FD986203       --> AAGCGATCATGGTCATCCTCCTAACCATGCCTGGCCTCGACGCCCTCCGC

               201    -    251
UN08831        --> AAAGGGCTGATCGCCGTCACGCGCAACCTCCTGAAACCGTTTCTCTCCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531545       <-- AAAGGACTGATCGCCGTCACGCGCAACCTCCTGAAACCGTTTCTCTCCAT  Raphanus raphanistrum subsp. maritimus
FD555944       <-- AAAGGGCTGATCGCCGTCACGCGCAACCTCCTGAAACCGTTTCTCTCCAT  Raphanus raphanistrum subsp. landra
FD982491       <-- AAAGGGCTGATCGCCGTCACGCGCAACCTCCTGAAACCGTTTCTCTCCAT  Raphanus raphanistrum subsp. landra
EV527245       --> AAAGGACTGATCGCCGTCACGCGCAACCTCCTGAAACCGTTTCTCTCCAT  Raphanus raphanistrum subsp. maritimus
EX887203       --> AAAGGACTGATCGCCGTCACGCGCAACCTCCTGAAACCGTTTCTCTCCAT  Raphanus sativus var. oleiformis
FD560372       --> AAAGGGCTGATCGCCGTCACGCGCAACCTCCTGAAACCGTTTCTCTCCAT  Raphanus raphanistrum subsp. landra
FD986203       --> AAAGGGCTGATCGCCGTCACGCGCAACCTCCTGAAACCGTTTCTCTCCAT  Raphanus raphanistrum subsp. landra

               251    -    301
UN08831        --> CATACCTTTCTGCCTCTTCCTCCTCATGGACATCTACTGGAAGTACGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531545       <-- CATACCTTTCTGCCTCTTCCTCCTCATGGACATCTACTGGAAGTACGAGA
FD555944       <-- CATACCTTTCTGCCTCTTCCTCCTCATGGACATCTACTGGAAGTACGAGA
FD982491       <-- CATACCTTTCTGCCTCTTCCTCCTCATGGACATCTACTGGAAGTACGAGA
EV527245       --> CATACCTTTCTGCCTCTTCCTCCTCATGGACATCTACTGGAAGTACGAGA
EX887203       --> CATACCTTTCTGCCTCTTCCTCCTCATGGACATCTACTGGAAGTACGAGA
FD560372       --> CATACCTTTCTGCCTCTTCCTCCTCATGGACATCTACTGGAAGTACGAGA
FD986203       --> CATACCTTTCTGCCTCTTCCTCCTCATGGACATCTACTGGAAGTACGAGA

               301    -    351
UN08831        --> CCCGGCCTTCCTGCGACGGCGACTCCTGCACCCCTTCCGAGCACCTCCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531545       <-- CCCGGCCTTCCTGCGACGGCGACTCCTGCACCCCTTCCGAGCACCTCCGT
FD555944       <-- CCCGGCCTTCCTGCGACGGCGACTCCTGCACCCCTTCCGAGCACCTCCGT
FD982491       <-- CCCGGCCTTCCTGCGACGGCGACTCCTGCACCCCTTCCGAGCACCTCCGT
EV527245       --> CCCGGCCTTCCTGCGACGGCGACTCCTGCACCCCTTCCGAGCACCTCCGT
EX887203       --> CCCGGCCTTCCTGCGACGGCGACTCCTGCACCCCTTCCGAGCACCTCCGT
FD560372       --> CCCGGCCTTCCTGCGACGGCGACTCCTGCACCCCTTCCGAGCACCTCCGT
FD986203       --> CCCGGCCTTCCTGCGACGGCGACTCCTGCACCCCTTCCGAGCACCTCCGT

               351    -    401
UN08831        --> CACCAGAAGTCGATCATGAAGTCGCAGCGCAACGCGCTCCTGATCGCGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531545       <-- CACCAGAAGTCGATCATGAAGTCTCAGCGCAACGCCCTCCTGATCGCGTC  Raphanus raphanistrum subsp. maritimus
FD555944       <-- CACCAGAAGTCGATCATGAAGTCGCAGCGCAACGCGCTCCTGATCGCGTC  Raphanus raphanistrum subsp. landra
FD982491       <-- CACCAGAAGTCGATCATGAAGTCGCAGCGCAACGCGCTCCTGATCGCGTC  Raphanus raphanistrum subsp. landra
EV527245       --> CACCAGAAGTCGATCATGAAGTCTCAGCGCAACGCCCTCCTGATCGCGTC  Raphanus raphanistrum subsp. maritimus
EX887203       --> CACCAGAAGTCGATCATGAAGTCTCAGCGCAACGCCCTCCTGATCGCGTC  Raphanus sativus var. oleiformis
FD560372       --> CACCAGAAGTCGATCATGAAGTCGCAGCGCAACGCGCTCCTGATCGCGTC  Raphanus raphanistrum subsp. landra
FD986203       --> CACCAGAAGTCGATCATGAAGTCGCAGCGCAACGCGCTCCTGATCGCGTC  Raphanus raphanistrum subsp. landra

               401    -    451
UN08831        --> GGCGCTGGTTTTCTACTGGATTCTCTACTCCGTCACGAATCTCGTCGTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531545       <-- GGCGCTGGTTTTCTACTGGATTCTCTACTCCGTCACGAATCTCGTCGTGA
FD555944       <-- GGCGCTGGTTTTCTACTGGATTCTCTACTCCGTCACGAATCTCGTCGTGA
FD982491       <-- GGCGCTGGTTTTCTACTGGATTCTCTACTCCGTCACGAATCTCGTCGTGA
EV527245       --> GGCGCTGGTTTTCTACTGGATTCTCTACTCCGTCACGAATCTCGTCGTGA
EX887203       --> GGCGCTGGTTTTCTACTGGATTCTCTACTCCGTCACGAATCTCGTCGTGA
FD560372       --> GGCGCTGGTTTTCTACTGGATTCTCTACTCCGTCACGAATCTCGTCGTGA
FD986203       --> GGCGCTGGTTTTCTACTGGATTCTCTACTCCGTCACGAATCTCGTCGTGA

               451    -    501
UN08831        --> GGATCGAGCAGCTTAACCAGAGGGTTGAGAGGCTTAGGAAGAGGGAGTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531545       <-- GGATCGAGCAGCTTAACCAGAGGGTTGAGAGGCTTAGGAAGAGGGAGTAA
FD555944       <-- GGATCGAGCAGCTTAACCAGAGGGTTGAGAGGCTTAGGAAGAGGGAGTAA
FD982491       <-- GGATCGAGCAGCTTAACCAGAGGGTTGAGAGGCTTAGGAAGAGGGAGTAA
EV527245       --> GGATCGAGCAGCTTAACCAGAGGGTTGAGAGGCTTAGGAAGAGGGAGTAA
EX887203       --> GGATCGAGCAGCTTAACCAGAGGGTTGAGAGGCTTAGGAAGAGGGAGTAA
FD560372       --> GGATCGAGCAGCTTAACCAGAGGGTTGAGAGGCTTAGGAAGAGGGAGTAA
FD986203       --> GGATCGAGCAGCTTAACCAGAGGGTTGAGAGGCTTAGGAAGAGGGAGTAA

               501    -    551
UN08831        --> AGCTTTTTGGTTCGTTTCTTTCTGCGTTTT-TTCGTTTTTTAATGTATGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531545       <-- AGCTTTTTGGTTCGTTTCTTTCTGCGTTTTCTTCGTTTTTTAATGTATGC  Raphanus raphanistrum subsp. maritimus
FD555944       <-- AGCTTTTTGGTTCGTTTCTTTCTGCGTTTT-TTCGTTTTTTAATGTATGC  Raphanus raphanistrum subsp. landra
FD982491       <-- AGCTTTTTGGTTCGTTTCTTTCTGCGTTTT-TTCGTTTTTTAATGTATGC  Raphanus raphanistrum subsp. landra
EV527245       --> AGCTTTTTGGTTCGTTTCTTTCTGCGTTTTCTTCGTTTTTTAATGTATGC  Raphanus raphanistrum subsp. maritimus
EX887203       --> AGCTTTTTGGTTCGTTTCTTTCTGCGTTTTCTTCGTTTTTTAATGTATGC  Raphanus sativus var. oleiformis
FD560372       --> AGCTTTTTGGTTCGTTTCTTTCTGCGTTTT-TTCGTTTTTTAATGTATGC  Raphanus raphanistrum subsp. landra
FD986203       --> AGCTTTTTGGTTCGTTTCTTTCTGCGTTTT-TTCGTTTTTTAATGTATGC  Raphanus raphanistrum subsp. landra

               551    -    601
UN08831        --> TTTTATCTTGTGGAGAGGTTGTAAGGATCTATGCTCTGTTATCTTTGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531545       <-- TTTTATCTTGTGGAGAGGTTGTAAGAATCTATGCTCTGTTATCTTTGATT
FD555944       <-- TTTTATCTTGTGGAGAGGTTGTAAGGATCTATGCTCTGTTATCTTTGATT
FD982491       <-- TTTTATCTTGTGGAGAGGTTGTAAGGATCTATGCTCTGTTATCTTTGATT
EV527245       --> TTTTATCTTGTGGAGAGGTTGTAAGAATCTATGCTCTGTTATCTTTGATT
EX887203       --> TTTTATCTTGTGGAGAGGTTGTAAGGATCTATGCTCTGTTATCTTTGATT
FD560372       --> TTTTATCTTGTGGAGAGGTTGTAAGGATCTATGCTCTGTTATCTTTGATT
FD986203       --> TTTTATCTTGTGGAGAGGTTGTAAGGATCTATGCTCTGTTATCTTTGATT

               601    -    651
UN08831        --> AGTATGATGAATCTGTTTACAGTTTGATAATCAAAAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV531545       <-- AGTATGATGAATCTGTTTACAGTTTGAT...........
FD555944       <-- AGTATGATGAATCTGTTTACAGTTTGATAATC.......
FD982491       <-- AGTATGATGAATCTGTTTACAGTTTGATAATC.......
EV527245       --> AGTATGATGAATCTGTTTACAGTTTGAT...........
EX887203       --> AGTATGATGAATCTGTTTACAGTTTGATA..........
FD560372       --> AGTATGATGAATCTGTTTACAGTTTGATAATCAAAAAAA
FD986203       --> AGTATGATGAATCTGTTTACAGTTTGATAATC.......