1 - 51
UN08904 --> GGCTTCTTCTTCCTCACTACTCTCTGCGCCGCTCTCTCTCTCTCTCTCTC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD548038 <-- GGCTTCTTCTTCCTCACTACTCTCTGCGCCGCTCTCTCTCTCTCTCTCTC
EY893527 <-- ............gggACTACTCTCTGCGCCGCTCTCTCTCTCTCTCTCTC
EY894081 <-- ............gggACTACTCTCTGCGCCGCTCTCTCTCTCTCTCTCTC
FD975906 <-- ................ggACTCTCTGCGCCGCTCTCTCTCTCTCTCTCTC
FD552221 --> GGCTTCTTCTTCCTCACTACTCTCTGCGCCGCTCTCTCTCTCTCTCTCTC
EY897128 --> ............gggACTACTCTCTGCGCCGCTCTCTCTCTCTCTCTCTC
EY897880 --> ............gggACTACTCTCTGCGCCGCTCTCTCTCTCTCTCTCTC
FD979937 --> ................ggACTCTCTGCGCCGCTCTCTCTCTCTCTCTCTC
51 - 101
UN08904 --> GATCTTTCTCCTGTGGTTTCGTTTCTAAAAG---AGTACAGAATCAATGG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD548038 <-- GATCTTTCTCCTGTGGTTTCGTTTCTAAAAGTAGAGTACAGAATCAATGG
EY893527 <-- GATCTTTCTCCTGTGGTTTCGTTTCTAAAAG---AGTACAGAATCAATGG
EY894081 <-- GATCTTTCTCCTGTGGTTTCGTTTCTAAAAG---AGTACAGAATCAATGG
FD975906 <-- GATCTTTCTCCTGTGGTTTCGTTTCTAAAAG---AGTACAGAATCAATGG
FD552221 --> GATCTTTCTCCTGTGGTTTCGTTTCTAAAAGTAGAGTACAGAATCAATGG
EY897128 --> GATCTTTCTCCTGTGGTTTCGTTTCTAAAAG---AGTACAGAATCAATGG
EY897880 --> GATCTTTCTCCTGTGGTTTCGTTTCTAAAAG---AGTACAGAATCAATGG
FD979937 --> GATCTTTCTCCTGTGGTTTCGTTTCTAAAAG---AGTACAGAATCAATGG
101 - 151
UN08904 --> CGAGCGGTGGCTTGAGAGAACCACCGAACGAGCAAGCGGTTCTGAACATC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD548038 <-- CGAGCGGTGGCTTGAGAGAACCACCGAACGAGCAAGCGGTTCTGAACATC
EY893527 <-- CGAGCGGTGGCTTGAGAGAACCACCGAACGAGCAAGCGGTTCTGAACATC
EY894081 <-- CGAGCGGTGGCTTGAGAGAACCACCGAACGAGCAAGCGGTTCTGAACATC
FD975906 <-- CGAGCGGTGGCTTGAGAGAACCACCGAACGAGCAAGCGGTTCTGAACATC
FD552221 --> CGAGCGGTGGCTTGAGAGAACCACCGAACGAGCAAGCGGTTCTGAACATC
EY897128 --> CGAGCGGTGGCTTGAGAGAACCACCGAACGAGCAAGCGGTTCTGAACATC
EY897880 --> CGAGCGGTGGCTTGAGAGAACCACCGAACGAGCAAGCGGTTCTGAACATC
FD979937 --> CGAGCGGTGGCTTGAGAGAACCACCGAACGAGCAAGCGGTTCTGAACATC
151 - 201
UN08904 --> TACGAGTCCATGAGATCAGAGCTGAGCCAGATCTATTCCAACATTACCGA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD548038 <-- TACGAGTCCATGAGATCAGAGCTGAGCCAGATCTATTCCAACATTACCGA
EY893527 <-- TACGAGTCCATGAGATCAGAGCTGAGCCAGATCTATTCCAACATTACCGA
EY894081 <-- TACGAGTCCATGAGATCAGAGCTGAGCCAGATCTATTCCAACATTACCGA
FD975906 <-- TACGAGTCCATGAGATCAGAGCTGAGCCAGATCTATTCCAACATTACCGA
FD552221 --> TACGAGTCCATGAGATCAGAGCTGAGCCAGATCTATTCCAACATTACCGA
EY897128 --> TACGAGTCCATGAGATCAGAGCTGAGCCAGATCTATTCCAACATTACCGA
EY897880 --> TACGAGTCCATGAGATCAGAGCTGAGCCAGATCTATTCCAACATTACCGA
FD979937 --> TACGAGTCCATGAGATCAGAGCTGAGCCAGATCTATTCCAACATTACCGA
201 - 251
UN08904 --> TCTCGAGATGCAAGTCAGCGAACACTCTCTCGTCATCAACGCCATCCAGC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD548038 <-- TCTCGAGATGCAAGTCAGCGAACACTCTCTCGTCATCAACGCCATCCAGC
EY893527 <-- TCTCGAGATGCAAGTCAGCGAACACTCTCTCGTCATCAACGCCATCCAGC
EY894081 <-- TCTCGAGATGCAAGTCAGCGAACACTCTCTCGTCATCAACGCCATCCAGC
FD975906 <-- TCTCGAGATGCAAGTCAGCGAACACTCTCTCGTCATCAGCGCCATCCAGC
FD552221 --> TCTCGAGATGCAAGTCAGCGAACACTCTCTCGTCATCAACGCCATCCAGC
EY897128 --> TCTCGAGATGCAAGTCAGCGAACACTCTCTCGTCATCAACGCCATCCAGC
EY897880 --> TCTCGAGATGCAAGTCAGCGAACACTCTCTCGTCATCAACGCCATCCAGC
FD979937 --> TCTCGAGATGCAAGTCAGCGAACACTCTCTCGTCATCAGCGCCATCCAGC
251 - 301
UN08904 --> CTCTGGACCAGTCTAGGAAATGCTTCCGCATGATAGGAGGCGTTCTTGTG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD548038 <-- CTCTGGACCAGTCTAGGAAATGCTTCCGCATGATAGGAGGCGTTCTTGTG
EY893527 <-- CTCTGGACCAGTCTAGGAAATGCTTCCGCATGATAGGAGGCGTTCTTGTG
EY894081 <-- CTCTGGACCAGTCTAGGAAATGCTTCCGCATGATAGGAGGCGTTCTTGTG
FD975906 <-- CTCTGGACCAGTCTAGGAAATGCTTCCGCATGATAGGAGGCGTTCTTGTG
FD552221 --> CTCTGGACCAGTCTAGGAAATGCTTCCGCATGATAGGAGGCGTTCTTGTG
EY897128 --> CTCTGGACCAGTCTAGGAAATGCTTCCGCATGATAGGAGGCGTTCTTGTG
EY897880 --> CTCTGGACCAGTCTAGGAAATGCTTCCGCATGATAGGAGGCGTTCTTGTG
FD979937 --> CTCTGGACCAGTCTAGGAAATGCTTCCGCATGATAGGAGGCGTTCTTGTG
301 - 351
UN08904 --> GAGAGAACCGTCAGAGAGGTGCTCCCAGCTGTCCAGCGCAACAAGGAAGG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD548038 <-- GAGAGAACCGTCAGAGAGGTGCTCCCAGCTGTCCAGCGCAACAAGGAAGG
EY893527 <-- GAGAGAACCGTCAGAGAGGTGCTCCCAGCTGTCCAGCGCAACAAGGAAGG
EY894081 <-- GAGAGAACCGTCAGAGAGGTGCTCCCAGCTGTCCAGCGCAACAAGGAAGG
FD975906 <-- GAGGGAACCGTCAGAGAGGTGCTCCCAGCTGTCCAGCGCAACAAGGAAGG
FD552221 --> GAGAGAACCGTCAGAGAGGTGCTCCCAGCTGTCCAGCGCAACAAGGAAGG
EY897128 --> GAGAGAACCGTCAGAGAGGTGCTCCCAGCTGTCCAGCGCAACAAGGAAGG
EY897880 --> GAGAGAACCGTCAGAGAGGTGCTCCCAGCTGTCCAGCGCAACAAGGAAGG
FD979937 --> GAGGGAACCGTCAGAGAGGTGCTCCCAGCTGTCCAGCGCAACAAGGAAGG
351 - 401
UN08904 --> GCTCGAGGAGGTTGTGAGGAAGCTTTACGAGACGTTGGAGAAGAAGAAGA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD548038 <-- GCTCGAGGAGGTTGTGAGGAAGCTTTACGAGACGTTGGAGAAGAAGAAGA
EY893527 <-- GCTCGAGGAGGTTGTGAGGAAGCTTTACGAGACGTTGGAGAAGAAGAAGA
EY894081 <-- GCTCGAGGAGGTTGTGAGGAAGCTTTACGAGACGTTGGAGAAGAAGAAGA
FD975906 <-- GCTCGAGGAGGTTGTGAGGAAGCTTTACGAGACGTTGGAGAAGAAGAAGA
FD552221 --> GCTCGAGGAGGTTGTGAGGAAGCTTTACGAGACGTTGGAGAAGAAGAAGA
EY897128 --> GCTCGAGGAGGTTGTGAGGAAGCTTTACGAGACGTTGGAGAAGAAGAAGA
EY897880 --> GCTCGAGGAGGTTGTGAGGAAGCTTTACGAGACGTTGGAGAAGAAGAAGA
FD979937 --> GCTCGAGGAGGTTGTGAGGAAGCTTTACGAGACGTTGGAGAAGAAGAAGA
401 - 451
UN08904 --> AAGATATGAGTGAGTTTGAAGCCAAGTATCAGATCAGGCTAAGGAAGCAG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD548038 <-- AAGATATGAGTGAGTTTGAAGCCAAGTATCAGATCAGGCTAAGGAAGCAG
EY893527 <-- AAGATATGAGTGAGTTTGAAGCCAAGTATCAGATCAGGCTAAGGAAGCAG
EY894081 <-- AAGATATGAGTGAGTTTGAAGCCAAGTATCAGATCAGGCTAAGGAAGCAG
FD975906 <-- AAGATATGAGTGAGTTTGAAGCCAAGTATCAGATCAGGCTAAGGAAGCAG
FD552221 --> AAGATATGAGTGAGTTTGAAGCCAAGTATCAGATCAGGCTAAGGAAGCAG
EY897128 --> AAGATATGAGTGAGTTTGAAGCCAAGTATCAGATCAGGCTAAGGAAGCAG
EY897880 --> AAGATATGAGTGAGTTTGAAGCCAAGTATCAGATCAGGCTAAGGAAGCAG
FD979937 --> AAGATATGAGTGAGTTTGAAGCCAAGTATCAGATCAGGCTAAGGAAGCAG
451 - 501
UN08904 --> GACGATTCCAAGGAAGAAGGTAATAACAAAAAGGAAGGTAATGCTCAAGG
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD548038 <-- GACGATTCCAAGGAAGAAGGTAATAACAAAAAGGAAGGTAATGCTCAAGG
EY893527 <-- GACGATTCCAAGGAAGAAGGTAATAACAAAAAGGAAGGTAATGCTCAAGG
EY894081 <-- GACGATTCCAAGGAAGAAGGTAATAACAAAAAGGAAGGTAATGCTCAAGG
FD975906 <-- GACGATTCCAAGGAAGAAGGTAATAACAAAAAGGAAGGTAATGCTCAAGG
FD552221 --> GACGATTCCAAGGAAGAAGGTAATAACAAAAAGGAAGGTAATGCTCAAGG
EY897128 --> GACGATTCCAAGGAAGAAGGTAATAACAAAAAGGAAGGTAATGCTCAAGG
EY897880 --> GACGATTCCAAGGAAGAAGGTAATAACAAAAAGGAAGGTAATGCTCAAGG
FD979937 --> GACGATTCCAAGGAAGAAGGGAATAACAAAAAGGAAGGGAATGCTCAAGG
501 - 551
UN08904 --> TGTTCTTGTCGGCGCTGCTGCTGCTGCTGCCGCTGCCACTTCCAGCCAGT
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD548038 <-- TGTTCTTGTCGGCGCTGCTGCTGCTGCTGCCGCTGCCACTTCCAGCCAGT
EY893527 <-- TGTTCTTGTCGGCGCTGCTGCTGCTGCTGCCGCTGCCACTTCCAGCCAGT
EY894081 <-- TGTTCTTGTCGGCGCTGCTGCTGCTGCTGCCGCTGCCACTTCCAGCCAGT
FD975906 <-- TGTTCTTGTCGGCGCTGCTGCTGCTGCTGCCGCTGCCACTTCCAGCCAGT
FD552221 --> TGTTCTTGTCGGCGCTGCTGCTGCTGCTGCCGCTGCCACTTCCAGCCAGT
EY897128 --> TGTTCTTGTCGGCGCTGCTGCTGCTGCTGCCGCTGCCACTTCCAGCCAGT
EY897880 --> TGTTCTTGTCGGCGCTGCTGCTGCTGCTGCCGCTGCCACTTCCAGCCAGT
FD979937 --> TGTTCTTGTCGGCGCTGCTGCTGCTGCTGCCGCTGCCACTTCCAGCCAGT
551 - 601
UN08904 --> AAAACTTTCTTCCTTCTTTTTATGTGTCTACTTTAATGGTGTTTTGCTAA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD548038 <-- AAAACTTTCTTCCTTCTTTTTATGTGTCTACTTTAATGGTGTTTTGCTAA
EY893527 <-- AAAACTTTCTTCCTTCTTTTTATGTGTCTACTTTAATGGTGTTTTGCTAA
EY894081 <-- AAAACTTTCTTCCTTCTTTTTATGTGTCTACTTTAATGGTGTTTTGCTAA
FD975906 <-- AAAACTTTCTTCCTTCTTTTTATATGTCTACTTTAATGGTGTTTTGCTAA
FD552221 --> AAAACTTTCTTCCTTCTTTTTATGTGTCTACTTTAATGGTGTTTTGCTAA
EY897128 --> AAAACTTTCTTCCTTCTTTTTATGTGTCTACTTTAATGGTGTTTTGCTAA
EY897880 --> AAAACTTTCTTCCTTCTTTTTATGTGTCTACTTTAATGGTGTTTTGCTAA
FD979937 --> AAAACTTTCTTCCTTCTTTTTATATGTCTACTTTAATGGTGTTTTGCTAA
601 - 651
UN08904 --> GTTTATCTGGAATGTTTTGCATGTTACAAAACTTAGTAGACTGGAGGCTC
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD548038 <-- GTTTATCTGGAATGTTTTGCATGTTACAAAACTTAGTAGACTGGAGACTC Raphanus raphanistrum subsp. raphanistrum (NY)
EY893527 <-- GTTTATCTGGAATGTTTTGCATGTTACAAAACTTAGTAGACTGGAGGCTC Raphanus raphanistrum subsp. maritimus
EY894081 <-- GTTTATCTGGAATGTTTTGCATGTTACAAAACTTAGTAGACTGGAGGCTC Raphanus raphanistrum subsp. maritimus
FD975906 <-- GTTTATCTGGAATGTTTTGCATGTTATAAAACTTAGTAGACTGGAGACTC Raphanus raphanistrum subsp. raphanistrum (NY)
FD552221 --> GTTTATCTGGAATGTTTTGCATGTTACAAAACTTAGTAGACTGGAGACTC Raphanus raphanistrum subsp. raphanistrum (NY)
EY897128 --> GTTTATCTGGAATGTTTTGCATGTTACAAAACTTAGTAGACTGGAGGCTC Raphanus raphanistrum subsp. maritimus
EY897880 --> GTTTATCTGGAATGTTTTGCATGTTACAAAACTTAGTAGACTGGAGGCTC Raphanus raphanistrum subsp. maritimus
FD979937 --> GTTTATCTGGAATGTTTTGCATGTTATAAAACTTAGTAGACTGGAGACTC Raphanus raphanistrum subsp. raphanistrum (NY)
651 - 701
UN08904 --> ACCAATTTATAGATCAGTTTTGTGTTATGCTTTCTTATAAGTTATCATCA
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD548038 <-- ACCAATTTATAGATCAGTTTTGTGTT........................
EY893527 <-- ACCAATTTATAGATCAGTTTTGTGTTATGCTTTCTTATAAGTTATCATCA
EY894081 <-- ACCAATTTATAGATCAGTTTTGTGTTATGCTTTCTTATAAGTTATCATCA
FD975906 <-- ACCAATTTATAGATCAGTTTTGTGTTATGCTTTCTTATAAGTTgc.....
FD552221 --> ACCAATTTATAGATCAGTTTTGTGTTAaaaaaaa................
EY897128 --> ACCAATTTATAGATCAGTTTTGTGTTATGCTTTCTTATAAGTTATCATCA
EY897880 --> ACCAATTTATAGATCAGTTTTGTGTTATGCTTTCTTATAAGTTATCATCA
FD979937 --> ACCAATTTATAGATCAGTTTTGTGTTATGCTTTCTTATAAGTTgc.....
701 - 751
UN08904 --> TCTTTCTT
~~~~~~~~
FD548038 <-- ........
EY893527 <-- TCTTTCTT
EY894081 <-- TCTTTCTT
FD975906 <-- ........
FD552221 --> ........
EY897128 --> TC......
EY897880 --> TCTTTCTT
FD979937 --> ........
| 
