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Alignment for radish unigene UN08940

               1      -     51
UN08940        --> GGATCCATGCCACTTCTCTTTCTCTTGTCTTGGCAAAGTTTTGGGATCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736533       <-- ......................................TTTTGGGATCTT  Raphanus sativus cv Rat-Tail Radish #3870
EY926679       <-- ..........................................GGGATCTT  Raphanus sativus var. oleiformis
EY927747       <-- ..................................................  Raphanus sativus var. oleiformis
EV542845       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904242       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY912697       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY943463       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD582613       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD554106       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD975479       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV539985       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903221       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX769289       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX909692       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY907224       --> GGATCCATGCCACTTCTCTTTCTCTTGTCTTGGTAAAGTTTTGGGATCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY930952       --> GGATCCATGCCACTTCTCTTTCTCTTGTCTTGGCAAAGTTTTGGGATCTT  Raphanus sativus var. oleiformis
EV535254       --> ..................TTTCTCTTGTCTTGGTAAAGTTTTGGGATCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW731474       --> ..................TTTCTCTTGTCTTGGCAAAGTTTTGGGATCTT  Raphanus sativus cv Rat-Tail Radish #3870
EY908570       --> ..................TTTCTCTTGTCTTGGTAAAGTTTTGGGATCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY917135       --> ..................TTTCTCTTGTCTTGGCAAAATTTTGGGATCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY930492       --> ..................TTTCTCTTGTCTTGGCAAAGTTTTGGGATCTT  Raphanus sativus var. oleiformis
EY931898       --> ..................TTTCTCTTGTCTTGGCAAAGTTTTGGGATCTT  Raphanus sativus var. oleiformis
EY947599       --> ..................TTTCTCTTGTCTTGGCAAAGTTTTGGGATCTT  Raphanus sativus cv Rat-Tail Radish #3870
FD533872       --> ..................TTTCTCTTGTCTTGCTAAAGTTTTGGGATCTT  Raphanus raphanistrum subsp. maritimus
FD576969       --> ..................TTTCTCTTGTCTTGGCAAAGTTTTGGGATCTT  Raphanus sativus cv Rat-Tail Radish #3870
FD578453       --> ..................TTTCTCTTGTCTTGGCAAAGTTTTGGGATCTT  Raphanus sativus cv Rat-Tail Radish #3870
FD979446       --> ..................TTTCTCTTGTCTTGGCAAAATTTTGGGATCTT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD972086       --> ........................ggGTCTTGGTAAAGTTTTGGGATCTT  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723592       --> ..........................................GGGATCTT  Raphanus sativus cv Early Scarlet Globe
EV538945       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD558152       --> ..................................................  Raphanus raphanistrum subsp. landra
EX888283       --> ..................................................  Raphanus sativus var. oleiformis
EX906063       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               51     -    101
UN08940        --> ACACAACAACAACCACAACAAACAACAACCATATATTTGTCTTATTTGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736533       <-- ACACAACAACAACCACAACAAACAACAACCATATATTTGTCTTATTTGTA  Raphanus sativus cv Rat-Tail Radish #3870
EY926679       <-- ACACAACAACAACCACAACAAACAACAACCATATATTTGTCTTATTTGTA  Raphanus sativus var. oleiformis
EY927747       <-- ...............................TATATTTGTCTTATTTGTA  Raphanus sativus var. oleiformis
EV542845       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904242       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY912697       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY943463       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD582613       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
FD554106       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD975479       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV539985       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903221       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX769289       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX909692       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY907224       --> ACACCACAACAACCACAACAAACAACAACCATATACTTGTCCTATTTGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY930952       --> ACACAACAACAACCACAACAAACAACAACCATATATTTGTCTTATTTGTA  Raphanus sativus var. oleiformis
EV535254       --> ACACCACAACAACCACAACAAACAACAACCATATATTTGTCCTATTTGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW731474       --> ACACAACAACAACCACAACAAACAACAACCATATATTTGTCTTATTTGTA  Raphanus sativus cv Rat-Tail Radish #3870
EY908570       --> ACACCACAACAACCACAACAAACAACAACCATATATTTGTCCTATTTGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY917135       --> ACACAACAACAACCATAACAAACAACAACCATATATTTGTCTTATTTGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY930492       --> ACACAACAACAACCACAACAAACAACAACCATATATTTGTCTTATTTGTA  Raphanus sativus var. oleiformis
EY931898       --> ACACAACAACAACCACAACAAACAACAACCATATATTTGTCTTATTTGTA  Raphanus sativus var. oleiformis
EY947599       --> ACACAACAACAACCACAACAAACAACAACCATATATTTGTCTTATTTGTA  Raphanus sativus cv Rat-Tail Radish #3870
FD533872       --> ACACCACAACAACCACAACAAACAACAACCATATATTTGTCATATTTGTA  Raphanus raphanistrum subsp. maritimus
FD576969       --> ACACAACAACAACCACAACAAACAACAACCATATATTTGTCTTATTTGTA  Raphanus sativus cv Rat-Tail Radish #3870
FD578453       --> ACACAACAACAACCACAACAAACAACAACCATATATTTGTCTTATTTGTA  Raphanus sativus cv Rat-Tail Radish #3870
FD979446       --> ACACAACAACAACCACAACAAACAACAACCATATATTTGTCTTATTTGTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD972086       --> ACACCACAACAACCGCAACAAACAACAACCATATATTTGTCCTATTTGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723592       --> ACACAACAACAACCACAACAAACAACAACCATATATTTGTCTTATTTGTA  Raphanus sativus cv Early Scarlet Globe
EV538945       --> ..............................................TGTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD558152       --> ..................................................  Raphanus raphanistrum subsp. landra
EX888283       --> ..................................................  Raphanus sativus var. oleiformis
EX906063       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               101    -    151
UN08940        --> TCATTTGTCCCCTTGTGTTCTTTATCTTAAGGAAAGTAAAATCTTGATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736533       <-- TCATTTGTCCCCTTGTGTTCTTTATCTTAAGGAAAGTAAAATCTTGATTA
EY926679       <-- TCATTTGTCCCCCTGTGTTCTTTATCTTAAGGAAAGTAAAATCTTGATTA
EY927747       <-- TCATTTGTCCCCTTGTGTTCTTTATCTTAAGGAAAGTAAAATCTTGATTA
EV542845       <-- ..............GTGTTCTTTATCTTAAGGAAAGTAAAATCTTGATTA
EY904242       <-- ..............GTGTTCTTTATCTTAAGGAAAGTAAAATCTTGATTA
EY912697       <-- ..............GTGTTCTTTATCTTAAGGAAAGTAAAATCTTGATTA
EY943463       <-- ...............TGTTCTTTATCTTAAGGAAAGTAAAATCTTGATTA
FD582613       <-- ...............TGTTCTTTATCTTAAGGAAAGTAAAATCTTGATTA
FD554106       <-- ................................................TA
FD975479       <-- ..................................................
EV539985       <-- ..................................................
EY903221       <-- ..................................................
EX769289       <-- ..................................................
EX909692       <-- ..................................................
EY907224       --> TCATTTGTCCCCTTGTGTTCTTTATCTTAAGGAAAGTAAAATCTTGATTA
EY930952       --> TCATTTGTCCCCTTGTGTTCTTTATCTTAAGGAAAGTAAAATCTTGATTA
EV535254       --> TCATTTGTCCCCTTGTGTTCTTTATCTTAAGGAAAGTAAAATCTTGATTA
EW731474       --> TCATTTGTCCCCTTGTGTTCTTTATCTTAAGGAAAGTAAAATCTTGATTA
EY908570       --> TCATTTGTCCCCTTGTGTTCTTTATCTTAAGGAAAGTAAAATCTTGATTA
EY917135       --> TCATTTGTCCCCTTGTGTTCTTTATCTTAAGGAAAGTAAAATCTTGATTA
EY930492       --> TCATTTGTCCCCCTGTGTTCTTTATCTTAAGGAAAGTAAAATCTTGATTA
EY931898       --> TCATTTGTCCCCTTGTGTTCTTTATCTTAAGGAAAGTAAAATCTTGATTA
EY947599       --> TCATTTGTCCCCTTGTGTTCTTTATCTTAAGGAAAGTAAAATCTTGATTA
FD533872       --> TCATTTGTCCCCTTGTGTTCTTTATCTTAAGGAAAGTAAAATCTTGATTA
FD576969       --> TCATTTGTCCCCTTGTGTTCTTTATCTTAAGGAAAGTAAAATCTTGATTA
FD578453       --> TCATTTGTCCCCTTGTGTTCTTTATCTTAAGGAAAGTAAAATCTTGATTA
FD979446       --> TCATTTGTCCCCTTGTGTTCTTTATCTTAAGGAAAGTAAAATCTTGATTA
FD972086       --> TCATTTGTCCCCTTGTGTTCTTTATCTTAAGGAAAGTAAAATCTTGATTA
EW723592       --> TCATTTGTCCCCTTGTGTTCTTTATCTTAAGGAAAGTAAAATCTTGATTA
EV538945       --> TCATTTGTCCCCTTGTGTTCTTTATCTTAAGGAAAGTAAAATCTTGATTA
FD558152       --> ..........................ggAAGGAAAGTAAAATCTTGATTA
EX888283       --> ..................................................
EX906063       --> ..................................................

               151    -    201
UN08940        --> ATCTGAATAATGATGGGAGCAAATGATGGGAGAAGAACGCCTTTAATGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736533       <-- ATCTGAATAATGATGGGAGCAAATGATGGGAGAAGAACGCCTTTAATGAA  Raphanus sativus cv Rat-Tail Radish #3870
EY926679       <-- ATCTGAATAATGATGGGAGCAAATGATGGGAGAAGAACGCCTTTAATGAA  Raphanus sativus var. oleiformis
EY927747       <-- ATCTGAATAATGATGGGAGCAAATGATGGGAGAAGAACGCCTTTAATGAA  Raphanus sativus var. oleiformis
EV542845       <-- ATCTGAATAATGATGGGTGCAAATGATGGGAGAAGAACGCCTTTAATGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904242       <-- ATCTGAATAATGATGGGTGCAAATGATGGGAGAAGAACGCCTTTAATGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY912697       <-- ATCTGAATAATGATGGGAGCAAATGATGGGAGAAGAACGCCTTTAATGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY943463       <-- ATCTGAATAATGATGGGAGCAAATGATGGGAGAAGAACGCCTTTAATGAA  Raphanus sativus cv Rat-Tail Radish #3870
FD582613       <-- ATCTGAATAATGATGGGAGCAAATGATGGGAGAAGAACGCCTTTAATGAA  Raphanus sativus cv Rat-Tail Radish #3870
FD554106       <-- ATCTGAATAATGATGGGAGCAAATGATGGGAGAAGAACGCCTTTAATGAA  Raphanus raphanistrum subsp. landra
FD975479       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV539985       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903221       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX769289       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX909692       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY907224       --> ATCTGAATAATGATGGGTGCAAATGATGGGAGAAGAACGCCTTTAATGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY930952       --> ATCTGAATAATGATGGGAGCAAATGATGGGAGAAGAACGCCTTTAATGAA  Raphanus sativus var. oleiformis
EV535254       --> ATCTGATTAATGATGGGTGCAAATGATGGGAGAAGAACGCCTTTAATGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW731474       --> ATCTGAATAATGATGGGAGCAAATGATGGGAGAAGAACGCCTTTAATGAA  Raphanus sativus cv Rat-Tail Radish #3870
EY908570       --> ATCTGAATAATGATGGGTGCAAATGATGGGAGAAGAACGCCTTTAATGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY917135       --> ATCTGAATAATGATGGGAGCAAATGATGGGAGAAGAACGCCTTTAATGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY930492       --> ATCTGAATAATGATGGGAGCAAATGATGGGAGAAGAACGCCTTTAATGAA  Raphanus sativus var. oleiformis
EY931898       --> ATCTGAATAATGATGGGAGCAAATGATGGGAGAAGAACGCCTTTAATGAA  Raphanus sativus var. oleiformis
EY947599       --> ATCTGAATAATGATGGGAGCAAATGATGGGAGAAGAACGCCTTTAATGAA  Raphanus sativus cv Rat-Tail Radish #3870
FD533872       --> ATCTGAATAATGATGGGAGCAAATGATGGGAGAAGAACGCCTTTAATGAA  Raphanus raphanistrum subsp. maritimus
FD576969       --> ATCTGAATAATGATGGGAGCAAATGATGGGAGAAGAACGCCTTTAATGAA  Raphanus sativus cv Rat-Tail Radish #3870
FD578453       --> ATCTGAATAATGATGGGAGCAAATGATGGGAGAAGAACGCCTTTAATGAA  Raphanus sativus cv Rat-Tail Radish #3870
FD979446       --> ATCTGAATAATGATGGGAGCAAATGATGGGAGAAGAACGCCTTTAATGAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD972086       --> ATCTGAATAATGATGGGTGCAAATGATGGGAGAAGAACGCCTTTAATGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723592       --> ATCTGAATAATGATGGGAGCAAATGATGGGAGAAGAACGCCTTTAATGAA  Raphanus sativus cv Early Scarlet Globe
EV538945       --> ATCTGAATAATGATGGGTGCAAATGATGGGAGAAGAACGCCTTTAATGAA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD558152       --> ATCTGAATAATGATGGGAGCAAATGATGGGAGAAGAACGCCTTTAATGAA  Raphanus raphanistrum subsp. landra
EX888283       --> ..................................................  Raphanus sativus var. oleiformis
EX906063       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               201    -    251
UN08940        --> TCTTGGGGTTCAAGTATCGATGAGAGTATTAGCCATTGGCACTGCATTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736533       <-- TCTTGGGGTTCAAGTATCGATGAGAGTATTAGCCATCGGCACTGCATTGG  Raphanus sativus cv Rat-Tail Radish #3870
EY926679       <-- TCTTGGGGTTCAAGTATCGATGAGAGTATTAGCCATTGGCACTGCATTGG  Raphanus sativus var. oleiformis
EY927747       <-- TCTTGGGGTTCAAGTATCGATGAGAGTATTAGCCATTGGCACTGCATTGG  Raphanus sativus var. oleiformis
EV542845       <-- TCTTGGGGTTCAAGTATCGATGAGAGTGTTAGCCATTGGCACTGCATTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904242       <-- TCTTGGGGTTCAAGTATCGATGAGAGTGTTAGCCATTGGCACTGCATTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY912697       <-- TCTTGGGGTTCAAGTATCGATGAGAGTATTAGCCATTGGCACTGCATTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY943463       <-- TCTTGGGGTTCAAGTATCGATGAGAGTATTAGCCATTGGCACTGCATTGG  Raphanus sativus cv Rat-Tail Radish #3870
FD582613       <-- TCTTGGGGTTCAAGTATCGATGAGAGTATTAGCCATTGGCACTGCATTGG  Raphanus sativus cv Rat-Tail Radish #3870
FD554106       <-- TCTTGGGGTTCAAGTATCGATGAGAGTATTAGCCATTGGCACTGCATTGG  Raphanus raphanistrum subsp. landra
FD975479       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV539985       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903221       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX769289       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX909692       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY907224       --> TCTTGGGGTTCAAGTATCGATGAGAGTGTTAGCCATTGGCACTGCATTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY930952       --> TCTTGGGGTTCAGGTATCGATGAGAGTATTAGCCATTGGCACTGCATTGG  Raphanus sativus var. oleiformis
EV535254       --> TCTTGGGGTTCAAGTATCGATGAGAGTGTTAGCCATTGGCACTGCATTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW731474       --> TCTTGGGGTTCAAGTATCGATGAGAGTATTAGCCATCGGCACTGCATTGG  Raphanus sativus cv Rat-Tail Radish #3870
EY908570       --> TCTTGGGGTTCAAGTATCGATGAGAGTGTTAGCCATTGGCACTGCATTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY917135       --> TCTTGGGGTTCAAGTATCGATGAGAGTATTAGCCATTGGCACTGCATTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY930492       --> TCTTGGGGTTCAAGTATCGATGAGAGTATTAGCCATTGGCACTGCATTGG  Raphanus sativus var. oleiformis
EY931898       --> TCTTGGGGTTCAAGTATCGATGAGAGTATTAGCCATTGGCACTGCATTGG  Raphanus sativus var. oleiformis
EY947599       --> TCTTGGGGTTCAAGTATCGATGAGAGTATTAGCCATTGGCACTGCATTGG  Raphanus sativus cv Rat-Tail Radish #3870
FD533872       --> TCTTGGGGTTCAAGTATCGATGAGAGTGTTAGCCATTGGCACTGCATTGG  Raphanus raphanistrum subsp. maritimus
FD576969       --> TCTTGGGGTTCAAGTATCGATGAGAGTATTAGCCATTGGCACTGCATTGG  Raphanus sativus cv Rat-Tail Radish #3870
FD578453       --> TCTTGGGGTTCAAGTATCGATGAGAGTATTAGCCATTGGCACTGCATTGG  Raphanus sativus cv Rat-Tail Radish #3870
FD979446       --> TCTTGGGGTTCAAGTATCGATGAGAGTATTAGCCATTGGCACTGCATTGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD972086       --> TCTTGGGGTTCAAGTATCGATGAGAGTGTTAGCCATTGGCACTGCATTGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723592       --> TCTTGGGGTTCAAGTATCGATGAGAGTATTAGCCATTGGCACTGCATTGG  Raphanus sativus cv Early Scarlet Globe
EV538945       --> TCTTGGGGTTCAAGTATCGA..............................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD558152       --> TCTTGGGGTTCAAGTATCGATGAGAGTATTAGCCATTGGCACTGCATTGG  Raphanus raphanistrum subsp. landra
EX888283       --> ..................................................  Raphanus sativus var. oleiformis
EX906063       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               251    -    301
UN08940        --> CCTCCATGGGGCTCACGATCACTAACCATGAAGTCGCCTCTGTTTATGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736533       <-- CCTCCATGGGGCTCACGATCACTAACCATGAAGTCGCCTCTGTTTATGGC  Raphanus sativus cv Rat-Tail Radish #3870
EY926679       <-- CCTCCATGGGGCTCACGATCATTAACCATGAAGTCGCCTCTGTTTATGGC  Raphanus sativus var. oleiformis
EY927747       <-- CCTCCATGGGGCTCACGATCACTAACCATGAAGTCGCCTCTGTTTATGGC  Raphanus sativus var. oleiformis
EV542845       <-- CCTCCATGGGGCTCACGATCACTAATCATGAAGTCGCCTCTGTTTATGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904242       <-- CCTCCATGGGGCTCACGATCACTAATCATGAAGTCGCCTCTGTTTATGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY912697       <-- CCTCCATGGGGCTCACGATCACTAACCATGAAGTCGCCTCTGTTTATGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY943463       <-- CCTCCATGGGGCTCACGATCACTAACCATGAAGTCGCCTCTGTTTATGGC  Raphanus sativus cv Rat-Tail Radish #3870
FD582613       <-- CCTCCATGGGGCTCACGATCACTAACCATGAAGTCGCCTCTGTTTATGGC  Raphanus sativus cv Rat-Tail Radish #3870
FD554106       <-- CCTCCATGGGGCTCACGATCACTAACCATGAAGTCGCCTCTGTTTATGGC  Raphanus raphanistrum subsp. landra
FD975479       <-- ......................................TCTGTTTATGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV539985       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903221       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EX769289       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX909692       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EY907224       --> CCTCCATGGGGCTCACGATCACTAATCATGAAGTCGCCTCTGTTTATGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY930952       --> CCTCCATGGGGCTCACGATCACTAACCATGAAGTCGCCTCTGTTTATGGC  Raphanus sativus var. oleiformis
EV535254       --> CCTCCATGGGGCTCACGATCACTAATCATGAAGTCGCCTCTGTTTATGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW731474       --> CCTCCATGGGGCTCACGATCACTAACCATGAAGTCGCCTCTGTTTATGGC  Raphanus sativus cv Rat-Tail Radish #3870
EY908570       --> CCTCCATGGGGCTCACGATCACTAATCATGAAGTCGCCTCTGTTTATGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY917135       --> CCTCCATGGGGCTCACGATCACTAACCATGAAGTCGCCTCTGTTTATGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY930492       --> CCTCCATGGGGCTCACGATCATTAACCATGAAGTCGCCTCTGTTTATGGC  Raphanus sativus var. oleiformis
EY931898       --> CCTCCATGGGGCTCACGATCACTAACCATGAAGTCGCCTCTGTTTATGGC  Raphanus sativus var. oleiformis
EY947599       --> CCTCCATGGGGCTCACGATCACTAACCATGAAGTCGCCTCTGTTTATGGC  Raphanus sativus cv Rat-Tail Radish #3870
FD533872       --> CCTCCATGGGGCTCACGATCACTAACCATGAAGTCGCCTCTGTTTATGGC  Raphanus raphanistrum subsp. maritimus
FD576969       --> CCTCCATGGGGCTCACGATCACTAACCACGAAGTCGCCTCTGTTTATGGC  Raphanus sativus cv Rat-Tail Radish #3870
FD578453       --> CCTCCATGGGGCTCACGATCACTAACCATGAAGTCGCCTCTGTTTATGGC  Raphanus sativus cv Rat-Tail Radish #3870
FD979446       --> CCTCCATGGGGCTCACTATCACTAACCATGAAGTCGCCTCTGTTTATGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD972086       --> CCTCCATGGGGCTCACGATCACTAATCATGAAGTCGCCTCTGTTTATGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723592       --> CCTCCATGGGGCTCACGATCACTAACCATGAAGTCGCCTCTGTTTATGGC  Raphanus sativus cv Early Scarlet Globe
EV538945       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD558152       --> CCTCCATGGGGCTCACGATCACTAACCATGAAGTCGCCTCTGTTTATGGC  Raphanus raphanistrum subsp. landra
EX888283       --> ................GATCACTAACCATGAAGTCGCCTCTGTTTATGGC  Raphanus sativus var. oleiformis
EX906063       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               301    -    351
UN08940        --> ATTAATTTTGAGGCTAAATACGACTACTCATCTGCCTTTAGGTATTTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736533       <-- ATTAATTTTGAGGCTAAATACGACTACTCATCTGCCTTTAGGTATTTGGT
EY926679       <-- ATTAATTTTGAGGCTAAATACGACTACTCATCTGCCTTTAGGTATTTGGT
EY927747       <-- ATTAATTTTGAGGCTAAATACGACTACTCATCTGCCTTTAGGTATTTGGT
EV542845       <-- ATTAATTTTGAGGCTAAATACGACTACTCATCTGCCTTTAGGTATTTGGT
EY904242       <-- ATTAATTTTGAGGCTAAATACGACTACTCATCTGCCTTTAGGTATTTGGT
EY912697       <-- ATTAATTTTGAGGCTAAATACGACTACTCATCTGCCTTTAGGTATTTGGT
EY943463       <-- ATTAATTTTGAGGCTAAATACGACTACTCATCTGCCTTTAGGTATTTGGT
FD582613       <-- ATTAATTTTGAGGCTAAATACGACTACTCATCTGCCTTTAGGTATTTGGT
FD554106       <-- ATTAATTTTGAGGCTAAATACGACTACTCATCTGCCTTTAGGTATTTGGT
FD975479       <-- ATTAATTTTGAGGCTAAATACGACTACTCATCTGCCTTTAGGTATTTGGT
EV539985       <-- ..................................CCTTTAGGTATTTGGT
EY903221       <-- ..................................CCTTTAGGTATTTGGT
EX769289       <-- ..................................................
EX909692       <-- ..................................................
EY907224       --> ATTAATTTTGAGGCTAAATACGACTACTCATCTGCCTTTAGGTATTTGGT
EY930952       --> ATTAATTTTGAGGCTAAATACGACTACTCATCTGCCTTTAGGTATTTGGT
EV535254       --> ATTAATTTTGAGGCTAAATACGACTACTCATCTGCCTTTAGGTATTTGGT
EW731474       --> ATTAATTTTGAGGCTAAATACGACTACTCATCTGCCTTTAGGTATTTGGT
EY908570       --> ATTAATTTTGAGGCTAAATACGACTACTCATCTGCCTTTAGGTATTTGGT
EY917135       --> ATTAATTTTGAGGCTAAATACGACTACTCATCTGCCTTTAGGTATTTGGT
EY930492       --> ATTAATTTTGAGGCTAAATACGACTACTCATCTGCCTTTAGGTATTTGGT
EY931898       --> ATTAATTTTGAGGCTAAATACGACTACTCATCTGCCTTTAGGTATTTGGT
EY947599       --> ATTAATTTTGAGGCTAAATACGACTACTCATCTGCCTTTAGGTATTTGGT
FD533872       --> ATTAATTTTGAGGCTAAATACGACTACTCATCTGCCTTTAGGTATTTGGT
FD576969       --> ATTAATTTTGAGGCTAAATACGACTACTCATCTGCCTTTAGGTATTTGGT
FD578453       --> ATTAATTTTGAGGCTAAATACGACTACTCATCTGCCTTTAGGTATTTGGT
FD979446       --> ATTAATTTTGAGGCTAAATACGACTACTCATCTGCCTTTAGGTATTTGGT
FD972086       --> ATTAATTTTGAGGCTAAATACGACTACTCATCTGCCTTTAGGTATTTGGT
EW723592       --> ATTAATTTTGAGGCTAAATACGACTACTCATCTGCCTTTAGGTATTTGGT
EV538945       --> ..................................................
FD558152       --> ATTAATTTTGAGGCTAAATACGACTACTCATCTGCCTTTAGGTATTTGGT
EX888283       --> ATTAATTTTGAGGCTAAATACGACTACTCATCTGCCTTTAGGTATTTGGT
EX906063       --> ..................................................

               351    -    401
UN08940        --> GTACGCAGAAATAGCTATCGCCGGCATGACATTGTTTACGCTCGTATGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736533       <-- GTACGCAGAAATAGCTATCGCCGGCATGACATTGTTTACGCTCGTATGGG
EY926679       <-- GTACGCAGAAATAGCTATCGCCGGCATGACATTGTTTACGCTCGTATGGG
EY927747       <-- GTACTCAGAAATAGCTATCGCCGGCATGACATTGTTTACGCTCGTATGGG
EV542845       <-- GTACGCAGAAATAGCTATCGCCGGCATGACATTGTTTACGCTCGTATGGG
EY904242       <-- GTACGCAGAAATAGCTATCGCCGGCATGACATTGTTTACGCTCGTATGGG
EY912697       <-- GTACGCAGAAATAGCTATCGCCGGCATGACATTGTTTACGCTCGTATGGG
EY943463       <-- GTACGCAGAAATAGCTATCGCCGGCATGACATTGTTTACGCTCGTATGGG
FD582613       <-- GTACGCAGAAATAGCTATCGCCGGCATGACATTGTTTACGCTCGTATGGG
FD554106       <-- GTACGCAGAAATAGCTATCGCCGGCATGACATTGTTTACGCTCGTATGGG
FD975479       <-- GTACGCAGAAATAGCTATCGCCGGCATGACATTGTTTACGCTCGTATGGG
EV539985       <-- GTACGCAGAAATAGCTATCGCCGGCATGACATTGTTTACGCTCGTATGGG
EY903221       <-- GTACGCAGAAATAGCTATCGCCGGCATGACATTGTTTACGCTCGTATGGG
EX769289       <-- ..............................................gGGG
EX909692       <-- ..............................................gGGG
EY907224       --> GTACGCAGAAATAGCTATCGCCGGCATGACATTGTTTACGCTCGTATGGG
EY930952       --> GTACGCAGAAATAGCTATCGCCGGCATGACATTGTTTACGCTCGTATGGG
EV535254       --> GTACGCAGAAATAGCTATCGCCGGCATGACATTGTTTACGCTCGTATGGG
EW731474       --> GTACGCAGAAATAGCTATCGCCGGCATGACATTGTTTACGCTCGTATGGG
EY908570       --> GTACGCAGAAATAGCTATCGCCGGCATGACATTGTTTACGCTCGTATGGG
EY917135       --> GTACGCAGAAATAGCTATCGCCGGCATGACATTGTTTACGCTCGTATGGG
EY930492       --> GTACGCAGAAATAGCTATCGCCGGCATGACATTGTTTACGCTCGTATGGG
EY931898       --> GTACTCAGAAATAGCTATCGCCGGCATGACATTGTTTACGCTCGTATGGG
EY947599       --> GTACGCAGAAATAGCTATCGCCGGCATGACATTGTTTACGCTCGTATGGG
FD533872       --> GTACGCAGAAATAGCTATCGCCGGCATGACATTGTTTACGCTCGTATGGG
FD576969       --> GTACGCAGAAATAGCTATCGCCGGCATGACATTGTTTACGCTCGTATGGG
FD578453       --> GTACGCAGAAATAGCTATCGCCGGCATGACATTGTTTACGCTCGTATGGG
FD979446       --> GTACGCAGAAATAGCTATCGCCGGCATGACATTGTTTACGCTCGTATGGG
FD972086       --> GTACGCAGAAATAGCTATCGCCGGCATGACATTGTTTACGCTCGTATGGG
EW723592       --> GTACGCAGAAATAGCTATCGCCGGCATGACATTGTTTACGCTCGTATGGG
EV538945       --> ..................................................
FD558152       --> GTACGCAGAAATAGCTATCGCCGGCATGACATTGTTTACGCTCGTATGGG
EX888283       --> GTACGCAGAAATAACTATCGCCGGCATGACATTGTTTACGCTCGTATGGG
EX906063       --> ..............................................gGGG

               401    -    451
UN08940        --> CTTGTTTAGCTGTCCGTAGAAGAGGACTTGTTTTTGCACTCTTCTTCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736533       <-- CTTGTTTAGCTGTCCGTAGAAGAGGACTTGTTTTTGCACTCTTCTTCTTT
EY926679       <-- CTTGCTTAGCTGTCCGTAGAAGAGGACTTGTTTTTGCACTCTTCTTCTTT
EY927747       <-- CTTGTTTAGCTGTCCGTAGAAGAGGACTTGTTTTTGCACTCTTCTTCTTT
EV542845       <-- CTTGTTTAGCTGTCCGTAGAAGAGGACTCGTTTTTGCACTCTTCTTCTTT
EY904242       <-- CTTGTTTAGCTGTCCGTAGAAGAGGACTTGTTTTTGCACTCTTCTTCTTT
EY912697       <-- CTTGTTTAGCTGTCCGTAGAAGAGGACTTGTTTTTGCACTCTTCTTCTTT
EY943463       <-- CTTGTTTAGCTGTCCGTAGAAGAGGACTTGTTTTTGCACTCTTCTTCTTT
FD582613       <-- CTTGTTTAGCTGTCCGTAGAAGAGGACTTGTTTTTGCACTCTTCTTCTTT
FD554106       <-- CTTGTTTAGCTGTCCGTAGAAGAGGACTTGTTTTTGCACTCTTCCTCTTT
FD975479       <-- CTTGTTTAGCTGTCCGTAGAAGAGGACTTGTTTTTGCACTCTTCTTCTTT
EV539985       <-- CTTGTTTAGCTGTCCGTAGAAGAGGACTTGTTTTTGCACTCTTTTTCTTT
EY903221       <-- CTTGTTTAGCTGTCCGTAGAAGAGGACTTGTTTTTGCACTCTTCTTCTTT
EX769289       <-- CTTGTTTAGCTGTCCGTAGAAGAGGACTTTTTTTTGCACTCTTCTTCTTT
EX909692       <-- CTTGTTTAGCTGTCCGTAGAAGAGGACTTTTTTTTGCACTCTTCTTCTTT
EY907224       --> CTTGTTTAGCTGTCCGTAGAAGAGGACTTGTTTTTGCACTCTTCTTCTTT
EY930952       --> CTTGTTTAGCTGTCCGTAGAAGAGGACTTGTTTTTGCACTCTTCTTCTTT
EV535254       --> CTTGTTTAGCTGTCCGTAGAAGAGGACTTGTTTTTGCACTCTTCTTCTTT
EW731474       --> CTTGTTTAGCTGTCCGTAGAAGAGGACTTGTTTTTGCACTCTTCTTCTTT
EY908570       --> CTTGTTTAGCTGTCCGTAGAAGAGGACTTGTTTTTGCACTCTTCTTCTTT
EY917135       --> CTTGTTTAGCTGTCCGTAGAAGAGGACTTGTTTTTGCACTCTTCTTCTTT
EY930492       --> CTTGCTTAGCTGTCCGTAGAAGAGGACTTGTTTTTGCACTCTTCTTCTTT
EY931898       --> CTTGTTTAGCTGTCCGTAGAAGAGGACTTGTTTTTGCACTCTTCTTCTTT
EY947599       --> CTTGTTTAGCTGTCCGTAGAAGAGGACTTGTTTTTGCACTCTTCTTCTTT
FD533872       --> CTTGTTTAGCTGTCCGTAGAAGAGGACTTGTTTTTGCACTCTTCTTCTTT
FD576969       --> CTTGTTTAGCTGTCCGTAGAAGAGGACTTGTTTTTGCACTCTTCTTCTTT
FD578453       --> CTTGTTTAGCTGTCCGTAGAAGAGGACTTGTTTTTGCACTCTTCTTCTTT
FD979446       --> CTTGTTTAGCTGTCCGTAGAAGAGGACTTGTTTTTGCACTCTTCTTCTTT
FD972086       --> CTTGTTTAGCTGTCCGTAGAAGAGGACTTGTTTTTGCACTCTTCTTCTTT
EW723592       --> CTTGTTTAGCTGTCCGTAGAAGAGGACTTGTTTTTGCACTCTTCTTCTTT
EV538945       --> ..................................................
FD558152       --> CTTGTTTAGCTGTCCGTAGAAGAGGACTTGTTTTTGCACTCTTCCTCTTT
EX888283       --> CTTGTTTAGCTGTCCGTAGAAGAGGACTTGTTTTTGCACTCTTCTTCTTT
EX906063       --> CTTGTTTAGCTGTCCGTAGAAGAGGACTTTTTTTTGCACTCTTCTTCTTT

               451    -    501
UN08940        --> GATTTGCTCACGACATTGACGGCTATATCGTCTTTCTCTGCGGCCATGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736533       <-- GATTTGCTCACGACATTGACGGCTATATCGTCTTTCTCTGCGGCCATGTC  Raphanus sativus cv Rat-Tail Radish #3870
EY926679       <-- GATTTGCTCACGACATTGACGGCTATATCGTCTTTCTCTGCGGCCATGTC  Raphanus sativus var. oleiformis
EY927747       <-- GATTTGCTCACGACATTGACGGCTATATCGTCTTTCTCTGCGGCCATGTC  Raphanus sativus var. oleiformis
EV542845       <-- GATTTGCTCACGACGTTGACGGCTATATCGTCTTTCTCTGCGGCCATGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904242       <-- GATTTGCTCACGACGTTGACGGCTATATCGTCTTTCTCTGCGGCCATGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY912697       <-- GATTTGCTCACGACATTGACGGCTATATCGTCTTTCTCTGCGGCCATGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY943463       <-- GATTTGCTCACGACATTGACGGCTATATCGTCTTTCTCTGCGGCCATGTC  Raphanus sativus cv Rat-Tail Radish #3870
FD582613       <-- GATTTGCTCACGACATTGACGGCTATATCGTCTTTCTCTGCGGCCATGTC  Raphanus sativus cv Rat-Tail Radish #3870
FD554106       <-- GATTTGCTCACGACATTGACGGCTATATCGTCTTTCTCTGCGGCCATGTC  Raphanus raphanistrum subsp. landra
FD975479       <-- GATTTGCTCACGACATTGACGGCTATATCGTCTTTTTCTGCGGCCATGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV539985       <-- GATTTGCTCACGACGTTGACGGCTATATCGTCTTTTTTTGCGGCCATGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903221       <-- GATTTGCTCACGACGTTGACGGCTATATCGTCTTTCTCTGCGGCCATGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX769289       <-- GATTTGCTCACGACATTGACGGCTATATCGTCTTTCTCTGCGGCCATGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX909692       <-- GATTTGCTCACGACATTGACGGCTATATCGTCTTTCTCTGCGGCCATGTC  Raphanus sativus cv Rat-Tail Radish #3870
EY907224       --> GATTTGCTCACGACGTTGACGGCTATATCGTCTTTCTCTGCGGCCATGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY930952       --> GATTTGCTCACGACATTGACGGCTATATCGTCTTTCTCTGCGGCCATGTC  Raphanus sativus var. oleiformis
EV535254       --> GATTTGCTCACGACGTTGACGGCTATATCGTCTTTCTCTGCGGCCATGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW731474       --> GATTTGCTCACGACATTGACGGCTATATCGTCTTTCTCTGCGGCCATGTC  Raphanus sativus cv Rat-Tail Radish #3870
EY908570       --> GATTTGCTCACGACGTTGACGGCTATATCGTCTTTCTCTGCGGCCATGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY917135       --> GATTTGCTCACGACATTGACGGCTATATCGTCTTTCTCTGCGGCCATGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY930492       --> GATTTGCTCACGACATTGACGGCTATATCGTCTTTCTCTGCGGCCATGTC  Raphanus sativus var. oleiformis
EY931898       --> GATTTGCTCACGACATTGACGGCTATATCGTCTTTCTCTGCGGCCATGTC  Raphanus sativus var. oleiformis
EY947599       --> GATTTGCTCACGACATTGACGGCTATATCGTCTTTCTCTGCGGCCATGTC  Raphanus sativus cv Rat-Tail Radish #3870
FD533872       --> GATTTGCTCACGACGTTGACGGCTATATCGTCTTTCTCTGCGGCCATGTC  Raphanus raphanistrum subsp. maritimus
FD576969       --> GATTTGCTCACGACATTGACGGCTATATCGTCTTTCTCTGCGGCCATGTC  Raphanus sativus cv Rat-Tail Radish #3870
FD578453       --> GATTTGCTCACGACATTGACGGCTATATCGTCTTTCTCTGCGGCCATGTC  Raphanus sativus cv Rat-Tail Radish #3870
FD979446       --> GATTTGCTCACGACATTGACGGCTATATCGTCTTTCTCTGCGGCCATGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD972086       --> GATTTGCTCACGACGTTGACGGCTATATCGTCTTTCTCTGCGGCCATGTC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723592       --> GATTTGCTCACGACATTGACGGCTATATCGTCTTTCTCTGCGGCCATGTC  Raphanus sativus cv Early Scarlet Globe
EV538945       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD558152       --> GATTTGCTCACGACATTGACGGCTATATCGTCTTTCTCTGCGGCCATGTC  Raphanus raphanistrum subsp. landra
EX888283       --> GATTTGCTCACGACATTGACGGCTATATCGTCTTTCTCTGCGGCCATGTC  Raphanus sativus var. oleiformis
EX906063       --> GATTTGCTCACGACATTGACGGCTATATCGTCTTTCTCTGCGGCCATGTC  Raphanus sativus cv Rat-Tail Radish #3870

               501    -    551
UN08940        --> GGATGGTTACATCGGCAAGTATGGTAATACACACGCCGGTTGGCTACCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736533       <-- GGATGGTTACATCGGCAAGTATGGTAATACACACGCCGGTTGGCTACCGA  Raphanus sativus cv Rat-Tail Radish #3870
EY926679       <-- GGATGGTTACATCGGCAAGTATGGTAATACACACGCCGGTTGGCTACCGA  Raphanus sativus var. oleiformis
EY927747       <-- GGATGGTTACATCGGCAAGTATGGTAATACACACGCCGGTTGGCTACCGA  Raphanus sativus var. oleiformis
EV542845       <-- GGATGGTTACATCGGAAAGTATGGTAATACACACGCCGGTTGGCTACCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904242       <-- GGATGGTTACATCGGAAAGTATGGTAATACACACGCCGGTTGGCTACCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY912697       <-- GGATGGTTACATCGGCAAGTATGGTAATACACACGCCGGTTGGCTACCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY943463       <-- GGATGGTTACATCGGCAAGTATGGTAATACACACGCCGGTTGGCTACCGA  Raphanus sativus cv Rat-Tail Radish #3870
FD582613       <-- GGATGGTTACATCGGCAAGTATGGTAATACACACGCCGGTTGGCTACCGA  Raphanus sativus cv Rat-Tail Radish #3870
FD554106       <-- GGATGGTTACATCGGAAAGTATGGTAGTACACACGCCGGTTGGCTACCGA  Raphanus raphanistrum subsp. landra
FD975479       <-- GGATGGTTACATCGGCAAGTATGGTAATACACACGCCGGTTGGCTACCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV539985       <-- GGATGGTTACATCGGAAAGTATGGTAATACACACGCCGGTTGGCTACCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903221       <-- GGATGGTTACATCGGAAAGTATGGTAATACACACGCCGGTTGGCTACCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX769289       <-- GGATGGTTACATCGGCAAGTATGGTAATACACACGCCGGTTGGCTACCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX909692       <-- GGATGGTTACATCGGCAAGTATGGTAATACACACGCCGGTTGGCTACCGA  Raphanus sativus cv Rat-Tail Radish #3870
EY907224       --> GGA...............................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY930952       --> GGATGGTTACATCGGCAAGTATGGTAATACACACGCCGGTTGGCTACCGA  Raphanus sativus var. oleiformis
EV535254       --> GGATGGTTACATCGGAAAGTATGGTAATACACACGCCGGTTGGCTACCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW731474       --> GGATGGTTACATCGGCAAGTATGGTAATACACACGCCGGTTGGCTACCGA  Raphanus sativus cv Rat-Tail Radish #3870
EY908570       --> GGATGGTTACATCGGAAAGTATGGTAATACACACGCCGGTTGGCTACCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY917135       --> GGATGGTTACATCGGCAAGTATGGTAATACACACGCCGGTTGGCTACCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY930492       --> GGATGGTTACATCGGCAAGTATGGTAATACACACGCCGGTTGGCTACCGA  Raphanus sativus var. oleiformis
EY931898       --> GGATGGTTACATCGGCAAGTATGGTAATACACACGCCGGTTGGCTACCGA  Raphanus sativus var. oleiformis
EY947599       --> GGATGGTTACATCGGCAAGTATGGTAATACACACGCCGGTTGGCTACCGA  Raphanus sativus cv Rat-Tail Radish #3870
FD533872       --> GGATGGTTACATCGGAAAGTATGGTAATACACACGCCGGTTGGCTACCGA  Raphanus raphanistrum subsp. maritimus
FD576969       --> GGATGGTTACATCGGCAAGTATGGTAATACACACGCCGGTTGGCTACCGA  Raphanus sativus cv Rat-Tail Radish #3870
FD578453       --> GGATGGTTACATCGGCAAGTATGGTAATACACACGCCGGTTGGCTACCGA  Raphanus sativus cv Rat-Tail Radish #3870
FD979446       --> GGATGGTTACATCGGCAAGTATGGTAATACACACGCCGGTTGGCTACCGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD972086       --> GGATGGTTACATCGGAAAGTATGGTAATACACACGCCGGTTGGCTACCGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723592       --> GGATGGTTACATCGGCAATTATGGTAATACACACGCCGGTTGGCTACCGA  Raphanus sativus cv Early Scarlet Globe
EV538945       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD558152       --> GGATGGTTACATCGGAAAGTATGGTAGTACACACGCCGGTTGGCTACCGA  Raphanus raphanistrum subsp. landra
EX888283       --> GGATGGTTACATCGGCAAGTATGGTAATACACACGCCGGTTGGCTACCGA  Raphanus sativus var. oleiformis
EX906063       --> GGATGGTTACATCGGCAAGTATGGTAATACACACGCCGGTTGGCTACCGA  Raphanus sativus cv Rat-Tail Radish #3870

               551    -    601
UN08940        --> TATGCGGCTACGTCCATAATTACTGTAACCGTGTTACTCTCTCACTCGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736533       <-- TATGCGGCTACGTCCATAATTACTGTAACCGTGTTACTCTCTCACTCGCT
EY926679       <-- TATGCGGCTACGTCCATAATTACTGTAACCGTGTTACTCTCTCACTCGCT
EY927747       <-- TATGCGGCTACGTCCATAATTACTGTAACCGTGTTACTCTCTCACTCGCT
EV542845       <-- TATGCGGCTACGTCCATAATTACTGTAACCGTGTTACTCTCTCACTCGCT
EY904242       <-- TATGCGGCTACGTCCATAATTACTGTAACCGTGTTACTCTCTCACTCGCT
EY912697       <-- TATGCGGCTACGTCCATAATTACTGTAACCGTGTTACTCTCTCACTCGCT
EY943463       <-- TATGCGGCTACGTCCATAATTACTGTAACCGTGTTACTCTCTCACTCGCT
FD582613       <-- TATGCGGCTACGTCCATAATTACTGTAACCGTGTTACTCTCTCACTCGCT
FD554106       <-- TATGCGGCTACGTCCATAATTACTGTAACCGTGTTACTCTCTCACTCGCT
FD975479       <-- TATGCGGCTACGTCCATAATTACTGTAACCGTGTTACTCTCTCACTCGCT
EV539985       <-- TATGCGGCTACGTCCATAATTACTGTAACCGTGTTACTCTCTCACTCGCT
EY903221       <-- TATGCGGCTACGTCCATAATTACTGTAACCGTGTTACTCTCTCACTCGCT
EX769289       <-- TATGCGGCTACGTCCATAATTACTGTAACCGTGTTACTCTCTCACTCGCT
EX909692       <-- TATGCGGCTACGTCCATAATTACTGTAACCGTGTTACTCTCTCACTCGCT
EY907224       --> ..................................................
EY930952       --> TATGCGGCTACGTCCATAATTACTGTAACCGTGTTACTCTCTCACTCGCT
EV535254       --> TATGCGGCTACGTCCATAATTACTGTAACCGTGTTACTCTCTCACTCGCT
EW731474       --> TATGCGGCTACGTCCATAATTACTGTAACCGTGTTACTCTCTCACTCGCT
EY908570       --> TATGCGGCTACGTCCATAATTACTGTAACCGTGTTACTCTCTCACTCGCT
EY917135       --> TATGCGGCTACGTCCATAATTACTGTAACCGTGTTACTCTCTCACTCGCT
EY930492       --> TATGCGGCTACGTCCATAATTACTGTAACCGTGTTACTCTCTCACTCGCT
EY931898       --> TATGCGGCTACGTCCATAATTACTGTAACCGTGTTACTCTCTCACTCGCT
EY947599       --> TATGCGGCTACGTCCATAATTACTGTAACCGTGTTACTCTCTCACTCGCT
FD533872       --> TATGCGGCTACGTCCATAATTACTGTAACCGTGTTACTCTCTCACTCGCT
FD576969       --> TATGCGGCTACGTCCATAATTACTGTAACCGTGTTACTCTCTCACTCGCT
FD578453       --> TATGCGGCTACGTCCATAATTACTGTAACCGTGTTACTCTCTCACTCGCT
FD979446       --> TATGCGGCTACGTCCATAATTACTGTAACCGTGTTACTCTCTCACTCGCT
FD972086       --> TATGCGGCTACGTCCACAATTACTGTAACCGTGTTACTCTCTCACTCGCT
EW723592       --> TATGCGGCTACGTCCATAATTACTGTAACCGTGTTACTCTCTCACTCGCT
EV538945       --> ..................................................
FD558152       --> TATGCGGCTACGTCCATAATTACTGTAACCGTGTTACTCTCTCACTCGCT
EX888283       --> TATGCGGCTACGTCCATAATTACTGTAACCGTGTTACTCTCTCACTCGCT
EX906063       --> TATGCGGCTACGTCCATAATTACTGTAACCGTGTTACTCTCTCACTCGCT

               601    -    651
UN08940        --> TTGTCCTTCGCATCTTTTCTCCTCTTGTTCATCCTTACAGTCTTAACTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736533       <-- TTGTCCTTCGCATCTTTTCTCCTCTTGTTCATCCTTACAGTCTTAACTGC
EY926679       <-- TTGTCCTTCGCATCTTTTCTCCTCTTGTTCATCCTTACAGTCTTAACTGC
EY927747       <-- TTGTCCTTCGCATCTTTTCTCCTCTTGTTCATCCTTACAGTCTTAACTGC
EV542845       <-- TTGTCCTTCGCATCTTTTCTCCTCTTGTTCATCCTTACAGTCTTAACTGC
EY904242       <-- TTGTCCTTCGCATCTTTTCTCCTCTTGTTCATCCTTACAGTCTTAACTGC
EY912697       <-- TTGTCCTTCGCATCTTTTCTCCTCTTGTTCATCCTTACAGTCTTAACTGC
EY943463       <-- TTGTCCTTCGCATCTTTTCTCCTCTTGTTCATCCTTACAGTCTTAACTGC
FD582613       <-- TTGTCCTTCGCATCTTTTCTCCTCTTGTTCATCCTTACAGTCTTAACTGC
FD554106       <-- TTGTCCTTCGCATCTTTTCTCCTCTTGTTCATCCTTACAGTCTTAACTGC
FD975479       <-- TTGTCCTTCGCATCTTTTCTCCTCTTGTTCATCCTTACAGTCTTAACTGC
EV539985       <-- TTGTCCTTCGCATCTTTTCTCCTCTTGTTCATCCTTACAGTCCTAACTGC
EY903221       <-- TTGTCCTTCGCATCCTTTCTCCTCTTGTTCATCCTTACAGTCTTAACTGC
EX769289       <-- TTGTCCTTCGCATCTTTTCTCCTCTTGTTCATCCTTACAGTCTTAACTGC
EX909692       <-- TTGTCCTTCGCATCTTTTCTCCTCTTGTTCATCCTTACAGTCTTAACTGC
EY907224       --> ..................................................
EY930952       --> TTGTCCTTCGCATCTTTTCTCCTCTTGTTCATCCTTACAGTCTTAACTGC
EV535254       --> TTGTCCTTCGCATCTTTTCTCCTCTTGTTCATCCTTACAGTCCTAACTGC
EW731474       --> TTGTCCTTCGCATCTTTTCTCCTCTTGTTCATCCTTACAGTCTTAACTGC
EY908570       --> TTGTCCTTCGCATCTTTTCTCCTCTTGTTCATCCTTACAGTCTTAACTGC
EY917135       --> TTGTCCTTCGCATCTTTTCTCCTCTTGTTCATCCTTACAGTCTTAACTGC
EY930492       --> TTGTCCTTCGCATCTTTTCTCCTCTTGTTCATCCTTACAG..........
EY931898       --> TTGTCCTTCGCATCTTTTCTCCTCTTGTTCATCCTTACAGTCTTAACTGC
EY947599       --> TTGTCCTTCGCATCTTTTCTCCTCTTGTTCATCCTTACAGTCTTAACTGC
FD533872       --> TTGTCCTTCGCATCTTTTCTCCTCTTGTTCATCCTTACAGTCTTAACTGC
FD576969       --> TTGTCCTTCGCATCTTTTCTCCCCTTGTTCATCCTTACAGTCTTAACTGC
FD578453       --> TTGTCCTTCGCATCTTTTCTCCTCTTGTTCATCCTTACAGTCTTAACTGC
FD979446       --> TTGTCCTTCGCATCTTTTCTCCTCTTGTTCATCCTTACAGTCTTAACTGC
FD972086       --> TTGTCCTTCGCATCTTTTCTCCTCTTGTTCATCCTTACAGTCTTAACTGC
EW723592       --> TTGTCCTTCGCATCTTTTCTCCTCTTGTTCATCCTTACAGTCTTAACTGC
EV538945       --> ..................................................
FD558152       --> TTGTCCTTCGCATCTTTTCTCCTCTTGTTCATCCTTACAGTCTTAACTGC
EX888283       --> TTGTCCTTCGCATCTTTTCTCCTCTTGTTCATCCTTACAGTCTTAACTGC
EX906063       --> TTGTCCTTCGCATCTTTTCTCCTCTTGTTCATCCTTACAGTCTTAACTGC

               651    -    701
UN08940        --> CTCAGCTGCTCGTCATTTCTGATTAACTTTCTTTACGTTTTCATATTATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736533       <-- CTCAGCTGCTCGTCATTTCTGATTAACTTTCTTTACGTTTTCATATTATA
EY926679       <-- CTCAGCTGCTCGTCATTTCTGATTAACTTTCTTTACGTTTTCATATTATA
EY927747       <-- CTCAGCTGCTCGTCATTTCTGATTAACTTTCTTTACGTTTTCATATTATA
EV542845       <-- CTCAGCTGCTCGTCATTTCTGATTAACTTTCTTTACGTTTTCATATTATA
EY904242       <-- CTCAGCTGCTCGTCATTTCTGATTAGCTTTCTTTACGTTTTCATATTATA
EY912697       <-- CTCAGCTGCTCGTCATTTCTGATTAACTTTCTTTACGTTTTCATATTATA
EY943463       <-- CTCAGCTGCTCGTCATTTCTGATTAACTTTCTTTACGTTTTCATATTATA
FD582613       <-- CTCAGCTGCTCGTCATTTCTGATTAACTTTCTTTACGTTGTCATATTATA
FD554106       <-- CTCAGCTGCTCGTCATTTCTGATTAACTTTCTTTACGTTTTCATATTATA
FD975479       <-- CTCAGCTGCTCGTCATTTCTGATTAACTTTCTTTACGTTTTCATATTATA
EV539985       <-- CTCAGCTGCTCGTCATTTTTGATTAACTTTCTTTACGTTTTCATATTATA
EY903221       <-- CTCAGCTGCTCGTCATTTCTGATTAACTTTCTTTACGTTTTCATATTATA
EX769289       <-- CTCAGCTGCTCGTCATTTCTGATTAACTTTCTTTACGTTTTCATATTATA
EX909692       <-- CTCAGCTGCTCGTCATTTCTGATTAACTTTCTTTACGTTTTCATATTATA
EY907224       --> ..................................................
EY930952       --> CTCAGCTGCTCGTCATTTCTGATTAACTTTCTTTACGTTTTCATATTATA
EV535254       --> CTCAGCTGCTCGTCATTTCTGATTAACTTTCTTTACGTTTTCATATTATA
EW731474       --> CTCAGCTGCTCGTCATTTCTGATTAACTTTCTTTACGTTTTCATATTATA
EY908570       --> CTCAGCTGCTCGTCATTTCTGATTAGCTTTCTTTACGTTTTCATATTATA
EY917135       --> CTCAGCTGCTCGTCATTTCTGATTAACTTTCTTTACGTTT-CATATTATA
EY930492       --> ..................................................
EY931898       --> CTCAGCTGCTCGTCATTTCTGATTAACTTTCTT.................
EY947599       --> CTCAGCTGCTCGTCATTTCTGATTA-CTTTCTTTACGTTTTCATATTATA
FD533872       --> CTCAGCTGCTCGTCATTTCTGATTAACTTTCTTTACGTTTTCATGTTATA
FD576969       --> CTCAGCTGCTCGTCATTTCTGATTA-CTTTCTTTACGTTTTCGTATTATA
FD578453       --> CTCAGCTGCTCGTCATTTCTGATTAACTTTCTTTACGTTGTCATATTATA
FD979446       --> CTCAGCTGCTCGTCATTTCTGATTAACTTTCTTTACGTTTTCATATTATA
FD972086       --> CTCAGCTGCTCGTCATTTCTGATTAACTTTCTTTGCGTCTTCATATTATA
EW723592       --> CTCAGCTGCTCGTCATTTCTGATTAACTTTCTTTACGTTTTCATATTATA
EV538945       --> ..................................................
FD558152       --> CTCAGCTGCTCGTCATTTCTGATTAACTTTCTTTACGTTTTCATATTATA
EX888283       --> CTCAGCTGCTCGTCATTTCTGATTAACTTTCTTTACGTTTTCATATTATA
EX906063       --> CTCAGCTGCTCGTCATTTCTGATTAACTTTCTTT................

               701    -    751
UN08940        --> CATTTGCTTAAATTCTCATGATTTTTCAAGCTTTCTTATACTACTTACTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736533       <-- CATTTGCTTAAATTCTCATGATTTTTCAAACTTTCTTATACTACTTACTA  Raphanus sativus cv Rat-Tail Radish #3870
EY926679       <-- CATTTGCTTAAATTCTCATGATTTTTCAAGCTTTCTTATACTACTTACTA  Raphanus sativus var. oleiformis
EY927747       <-- CATTTGCTTAAATTCTCATGATTTTTCAAGCTTTCTTATACTACTTACTA  Raphanus sativus var. oleiformis
EV542845       <-- CATTTGCTTAAGTTCTCATGATTTTTCAAGCTTTCTTATA-TACTTACTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY904242       <-- CATTTGCTTAAGTTCTCATGATTTTTCAAGCTTTCTTATA-TACTTACTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY912697       <-- CATTTGCTTAAATTCTCATGATTTTTCAAGCTTTCTTATACTACTTACTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY943463       <-- CATTTGCTTAAATTCTCATGATTTTTCAAGCTTTCTTATACTACTTACTA  Raphanus sativus cv Rat-Tail Radish #3870
FD582613       <-- CATTTGCTTAAATTCTCATGATTTT-CAAGCTTTCTTATACTACTTACTA  Raphanus sativus cv Rat-Tail Radish #3870
FD554106       <-- CATTTGCTTAAATTCTCATGATTTTTCAAGCTTTCTTATACTACTTACTA  Raphanus raphanistrum subsp. landra
FD975479       <-- CATTTGCTTAAATTCTCATGATTTTTCAAGCTTTCTTATACTACTTACTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV539985       <-- CATTTGCTTAAGTTCTCATGATTTTTCAAGCTTTTTTATA-TACTTACTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY903221       <-- CATTTGCTTAAGTTCTCATGATTTTTCAAGCTTTCTTATA-TACTTACTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX769289       <-- CATTTGCTTAAATTCTCATGATTTTTCAAGCTTTCTTATACTACTTACTA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX909692       <-- CATTTGCTTAAATTCTCATGATTTTTCAAGCTTTCTTATACTACTTACTA  Raphanus sativus cv Rat-Tail Radish #3870
EY907224       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY930952       --> CATTTGCTTAAATTCTCATGATTTTTCAAGCTTTCTTATACTACTTACTA  Raphanus sativus var. oleiformis
EV535254       --> CATTTGCTTAAGTTCTCATGATTTTTCAAGCTTTCTTATA-TACTTACTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW731474       --> CATTTGCTTAAATTCTCATGATTTTTCAAACTTTCTTATACTACTTACTA  Raphanus sativus cv Rat-Tail Radish #3870
EY908570       --> CATTTG............................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY917135       --> CATTTGCTTAAAT-CTCATGATTT..........................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY930492       --> ..................................................  Raphanus sativus var. oleiformis
EY931898       --> ..................................................  Raphanus sativus var. oleiformis
EY947599       --> CATTTGCTTAAATTCTCATGATTTT-CAAGCTTTCTTATACTACTTACTA  Raphanus sativus cv Rat-Tail Radish #3870
FD533872       --> CATTTGCTTAAATTCTCATGATTTTTCAAGCTTTCTTATA-TACTTACTA  Raphanus raphanistrum subsp. maritimus
FD576969       --> CATTTGCTTAAATTCTCATGATTTTTCA-GCTTTCTTATACTA.......  Raphanus sativus cv Rat-Tail Radish #3870
FD578453       --> CATTTGCTTAAATTCTCATGATTTT-CAAGCTTTCTTATACTACTTACTA  Raphanus sativus cv Rat-Tail Radish #3870
FD979446       --> CATTTGCTTAAATTCTCATGATTTTTCAAGCTTTCTTATACTACTTACTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD972086       --> CATTTGCTTAAGTTCTCATGATTTTTCAAGCTTTCTTATA-TACTTACTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EW723592       --> CATTTGCTTAAATTCTCATGATTTTTCAAGCTTTCTTATACTACTTACTA  Raphanus sativus cv Early Scarlet Globe
EV538945       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD558152       --> CATTTGCTTAAATTCTCATGATTTTTCAAGCTTTCTTATACTACTTACTA  Raphanus raphanistrum subsp. landra
EX888283       --> CATTTGCTTAAATTCTCATGATTTTTCAAGCTTTCTTATACTACTTACTA  Raphanus sativus var. oleiformis
EX906063       --> ..................................................  Raphanus sativus cv Rat-Tail Radish #3870

               751    -    801
UN08940        --> TTATAAGATGAAAAATCAAAAGAAAGAAATTGTATCCTTCCGTGAAATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736533       <-- TTATAAGATGAAAAATCAAAAGAAAGAAATTGTATCCTTCCGTGAAATGT
EY926679       <-- TTATAAGATGAAAAATCAAAAGAAAGAAATTGTATCCTTCCGTGAAATGT
EY927747       <-- TTATAAGATGAAAAATCAAAAGAAAGAAATTGTATCCTTCCGTGAAATGT
EV542845       <-- TTATAAGATGAAAAATCAAAAGAAAGAAATTGTATCCTTCCGTGAAATGT
EY904242       <-- TTATAAGATGAAAAATCAAAAGAAAGAAATTGTATCCTTCCGTTAAATGT
EY912697       <-- TTATAAGATGAAAAATCAAAAGAAAGAAATTGTATCCTTCCGTGAAATGT
EY943463       <-- TTATAAGATGAAAAATCAAAAGAAAGAAATTGTATCCTTCCGTGAAATGT
FD582613       <-- TTATAAGATGAAAAATCAAAAGAAAGAAATTGTATCCTTCCGTGAAATGT
FD554106       <-- TTATAAGATGAAAAATCAAAAGAAAGAAATTGTATCCTTCCGTGAAATGT
FD975479       <-- TTATAAGATGAAAAATCAAAAGAAAGAAATTGTATCCTTCCGTGAAATGT
EV539985       <-- TTATAAGATGAAAAATCAAAAGAAAGAAATTGTATCCTTCCGTGAAATGA
EY903221       <-- TTATAAGATGAAAAATCAAAAGAAAGAAATTGTATCCTTCCc........
EX769289       <-- TTATAAGATGAAAAATCAAAAGAAAGAAATTGTATCCTTCCGTGAAATGT
EX909692       <-- TTATAAGATGAAAAATCAAAAGAAAGAAATTGTATCCTTCCGTGAAATGT
EY907224       --> ..................................................
EY930952       --> TTATAAGATGAAAAA...................................
EV535254       --> TTATAAGATG........................................
EW731474       --> TTATAAGATGAAAAATCAAAAGAAAGAAATTGTATCCTTCCGTGAAATGT
EY908570       --> ..................................................
EY917135       --> ..................................................
EY930492       --> ..................................................
EY931898       --> ..................................................
EY947599       --> TTATA-GATGAAAAtc..................................
FD533872       --> TTATAgatg.........................................
FD576969       --> ..................................................
FD578453       --> TTATAAGATGAAAAt...................................
FD979446       --> TTATAAGATGAAAAA...................................
FD972086       --> TTATAAGATGAAAAtc..................................
EW723592       --> TTATAAGATGAAAAATCAAAAGAAAGAAATTGTATCCTTCCGTGAAATGT
EV538945       --> ..................................................
FD558152       --> TTATAAGATGAAAAATCAAAAGAAAGAAATTGTATCCTTCCGTGAAATGT
EX888283       --> TTATAAGATGAAAAA...................................
EX906063       --> ..................................................

               801    -    851
UN08940        --> TTGTCCTTGAGACTCTTGTTATTTGTTATGTTCAAGTCTCGTCTTCATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736533       <-- CTGTCCTTGAGACTCTTGTTATTTGTTATGTTCAAGTCTCGCCTTCATTT
EY926679       <-- TTGTCCTTGAGACTCTTGTTATTTGTTATGTTCAAGTCTCGTCTTCATTT
EY927747       <-- TTGTCCTTGAGACTCTTGTTATTTGTTATGTTCAAGTCTCGTCTTCATTT
EV542845       <-- TTGTCCTTGAGACTCTTGTTATTTGTTATGTTCAAGTCTCGTCTTCATTT
EY904242       <-- TTGTCCTTGAGACTCTTGTTATTTGTTATGTcc.................
EY912697       <-- TTGTCCTTGAGACTCTTGTTATTTGTTATGTTCAAGTCTCGTCTTCATTT
EY943463       <-- TTGTCCTTGAGACTCTTGTTATTTGTTATGTTCAAGTCTCGTCTTCATTT
FD582613       <-- TTGTCCTTGAGACTCTTGTTATTTGTTATATTCAAGTCTCGTCTTCATTT
FD554106       <-- TTGTCCTTGAGACTCTTGTTATTTGTTATGTTCAAGTCTCGTCTTCATTT
FD975479       <-- TTGTCCTTGAGACTCTTGTTATTTGTTATGTTCAAGTCTCGTCTcc....
EV539985       <-- TTGTCCTTGAGACTCTTGTTATTTGTTATGTTCAAGTTTCGTCTT.....
EY903221       <-- ..................................................
EX769289       <-- TTGTCCTTGAGACTCTTGTTATTTGTTATGTTCAAGTCTCGTCTTCATTT
EX909692       <-- TTGTCCTTGAGACTCTTGTTATTTGTTATGTTCAAGTCTCGTCTTCATTT
EY907224       --> ..................................................
EY930952       --> ..................................................
EV535254       --> ..................................................
EW731474       --> CTGTCCTTGAGACTCTTGTTATTTGTTATGTTCAAGTCTCGCCTTCATTT
EY908570       --> ..................................................
EY917135       --> ..................................................
EY930492       --> ..................................................
EY931898       --> ..................................................
EY947599       --> ..................................................
FD533872       --> ..................................................
FD576969       --> ..................................................
FD578453       --> ..................................................
FD979446       --> ..................................................
FD972086       --> ..................................................
EW723592       --> TTGTCCTTGAGACTCTTGTTATTTGTTATGTTCAAGTCTCGTC.......
EV538945       --> ..................................................
FD558152       --> TTGTCCTTGAGACTCTTGTTATTTGTTATGTTCAAGTCTCGTCTTCATTT
EX888283       --> ..................................................
EX906063       --> ..................................................

               851    -    901
UN08940        --> GGGACTCTTGTTACGTGTGCATTTCAATACTAATCAACCCCTCTCTATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EW736533       <-- GGGACTCT..........................................
EY926679       <-- GGGACT............................................
EY927747       <-- GGGACTCTT.........................................
EV542845       <-- Gtttttacc.........................................
EY904242       <-- ..................................................
EY912697       <-- GGGACT............................................
EY943463       <-- GGGACTCTTGTTACGTGTGCATTTCAATACT...................
FD582613       <-- GGGACTCTTGTTACGTGT................................
FD554106       <-- GGGACTCTTGTTACGTGTGCATTTCAATACTAATCAACCCCTCTCTATAT
FD975479       <-- ..................................................
EV539985       <-- ..................................................
EY903221       <-- ..................................................
EX769289       <-- GGGACTCT..........................................
EX909692       <-- GGGACTCT..........................................
EY907224       --> ..................................................
EY930952       --> ..................................................
EV535254       --> ..................................................
EW731474       --> GGGACTCT..........................................
EY908570       --> ..................................................
EY917135       --> ..................................................
EY930492       --> ..................................................
EY931898       --> ..................................................
EY947599       --> ..................................................
FD533872       --> ..................................................
FD576969       --> ..................................................
FD578453       --> ..................................................
FD979446       --> ..................................................
FD972086       --> ..................................................
EW723592       --> ..................................................
EV538945       --> ..................................................
FD558152       --> GGGACTCTTGTTACGTGTGCATTTCA-TACTAATCAACCCCTCTCTATAT
EX888283       --> ..................................................
EX906063       --> ..................................................

               901    -    951
UN08940        --> TCAAATG
                   ~~~~~~~
EW736533       <-- .......
EY926679       <-- .......
EY927747       <-- .......
EV542845       <-- .......
EY904242       <-- .......
EY912697       <-- .......
EY943463       <-- .......
FD582613       <-- .......
FD554106       <-- TCAAATG
FD975479       <-- .......
EV539985       <-- .......
EY903221       <-- .......
EX769289       <-- .......
EX909692       <-- .......
EY907224       --> .......
EY930952       --> .......
EV535254       --> .......
EW731474       --> .......
EY908570       --> .......
EY917135       --> .......
EY930492       --> .......
EY931898       --> .......
EY947599       --> .......
FD533872       --> .......
FD576969       --> .......
FD578453       --> .......
FD979446       --> .......
FD972086       --> .......
EW723592       --> .......
EV538945       --> .......
FD558152       --> c......
EX888283       --> .......
EX906063       --> .......