1      -     51
UN08950        --> GTACAATCAAACCACTCCATAATGTTACCAACTCAACACAGAAATGGGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY440767       <-- .............................................GGGCG
FY438454       <-- ..............................................GGCG
FY445934       <-- ..............................................GGCG
EX890379       <-- ...............................................GCG
FD947110       <-- ..................................................
EX764001       <-- ..................................................
EX768006       --> GTACAATCAAACCACTCCATAATGTTACCAACTCAACACAGAAATGGGCG
FD943111       --> ..............................................GGCG

               51     -    101
UN08950        --> AAAAAACTGAAATGTAAATTCATGATCCATATGTACATCAAAAACGAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY440767       <-- AAAAAACTGAAATGTAAATTCATGATCCATATGTACATCAAAAACGAGAC
FY438454       <-- AAAAAACTGAAATGTAAATTCATGATCCATATGTACATCAAAAACGAGAC
FY445934       <-- AAAAAACTGAAATGTAAATTCATGATCCATATGTACATCAAAAACGAGAC
EX890379       <-- AAAAAACTGAAATGTAAATTCATGATCCATATGTACATCAAAAACGAAAC
FD947110       <-- ..................................................
EX764001       <-- ..................................................
EX768006       --> AAAAAACTGAAATGTAAATTCATGATCCATATGTACATCAAAAACGAAAC
FD943111       --> AAAAAACTGAAATGTAAATTCATGATCCATATGTACATCAAAAACGAAAC

               101    -    151
UN08950        --> ATTTCTACATTTTCGCTCATTTTTTGTTATCATGTAGCTAAATTAAATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY440767       <-- ATTTCTACATTTTCGCTCATTTTTTGTTATCACGTAGCTAAATTAAATCT  Raphanus sativus cv GSK3-1
FY438454       <-- ATTTCTACATTTTCGCTCATTTTTTGTTATCACGTAGCTAAATTAAATCT  Raphanus sativus cv GSK3-1
FY445934       <-- ATTTCTACATTTTCGCTCATTTTTTGTTATCACGTAGCTAAATTAAATCT  Raphanus sativus cv GSK3-1
EX890379       <-- ATTTCTACATTTTCGCTCATTTTTTGTTATCATGCAGCTAAATTAAATCT  Raphanus sativus var. oleiformis
FD947110       <-- ...................TTTTTTGTTATCATGTAGCTAAATTAAATCT  Raphanus sativus cv Early Scarlet Globe
EX764001       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768006       --> ATTTCTACATTTTCGCTCATTTTT-GTTATCATGTAGCTAAATTAAATCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD943111       --> ATTTCTACATTTTCGCTCATTTTTTGTTATCATGTAGCTAAATTAAATCT  Raphanus sativus cv Early Scarlet Globe

               151    -    201
UN08950        --> AATACAGAGGAACGGGAAAACGCGGCGGCTTCACAGGTGGTGAATGCGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY440767       <-- AATACAGAGGAACGGGAAAACGCGGCGGCTTCACAGGTGGTGAATGCGGC
FY438454       <-- AATACAGAGGAACGGGAAAACGCGGCGGCTTCACAGGTGGTGAATGCGGC
FY445934       <-- AATACAGAGGAACGGGAAAACGCGGCGGCTTCACAGGTGGTGAATGCGGC
EX890379       <-- AATACAGAGGAACGGGAAAACGCGGCGGCTTCACAGGTGGTGAATGCGGC
FD947110       <-- AATACAGAGGAACGGGAAAACGCGGCGGCTTCACAGGTGGTGAATGCGGC
EX764001       <-- ..................................................
EX768006       --> AATACAGAGGAACGGGAAAACGCGGCGGCTTCACAGGTGGTGAATGCGGC
FD943111       --> AATACAGAGGAACGGGAAAACGCGGCGGCTTCACAGGTGGTGAATGCGGC

               201    -    251
UN08950        --> GGACTTTGAACATCGACGGTGAGCTTCTCCGGCCGAGGCGGTGCACACGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY440767       <-- GGACTTTGAACATCGACGGTGAGCTTCTCCGGCCGAGGAGGTGCACACGG  Raphanus sativus cv GSK3-1
FY438454       <-- GGACTTTGAACATCGACGGTGAGCTTCTCCGGCCGAGGAGGTGCACACGG  Raphanus sativus cv GSK3-1
FY445934       <-- GGACTTTGAACATCGACGGTGAGCTTCTCCGGCCGAGGAGGTGCACACGG  Raphanus sativus cv GSK3-1
EX890379       <-- GGACTTTGAACATCGACGGTGAGCTTCTCCGGCCGAGGCGGTGCACACGG  Raphanus sativus var. oleiformis
FD947110       <-- GGACTTTGAACATCGACGGTGAGCTTCTCCGGCCGAGGCGGTGCACACGG  Raphanus sativus cv Early Scarlet Globe
EX764001       <-- ........................TTCTCCGGCCGAGGCGGTGCACACGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768006       --> GGACTTTGAACATCGACGGTGAGCTTCTCCGGCCGAGGCGGTGCACACGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD943111       --> GGACTTTGAACATCGACGGTGAGCTTCTCCGGCCGAGGCGGTGCACACGG  Raphanus sativus cv Early Scarlet Globe

               251    -    301
UN08950        --> ACACGGTAATGCTATAAATTTCGGCGTATTATCTCCAGGCATCAACACCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY440767       <-- ACACGGCAATGCTATAAATTTCGGCGTATTATCTCCAGGCATCAACACCG  Raphanus sativus cv GSK3-1
FY438454       <-- ACACGGCAATGCTATAAATTTCGGCGTATTATCTCCAGGCATCAACACCG  Raphanus sativus cv GSK3-1
FY445934       <-- ACACGGCAATGCTATAAATTTCGGCGTATTATCTCCAGGCATCAACACCG  Raphanus sativus cv GSK3-1
EX890379       <-- ACACGGTAATGCTATAAATTTCGGCGTATTATCTCCAGGCATCAACACCG  Raphanus sativus var. oleiformis
FD947110       <-- ACACGGTAATGCTATAAATTTCGGCGTATTATCTCCAGGCATCAACACCG  Raphanus sativus cv Early Scarlet Globe
EX764001       <-- ACACGGTAATGCTATAAATTTCGGCGTATTATCTCCAGGCATCAACACCG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768006       --> ACACGGTAATGCTATAAATTTCGGCGTATTATCTCCAGGCATCAACACCG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD943111       --> ACACGGTAATGCTATAAATTTCGGCGTATTATCTCCAGGCATCAACACCG  Raphanus sativus cv Early Scarlet Globe

               301    -    351
UN08950        --> GTACACTCAGATTCTGGTTTTTCTTCAAATCCGGGAAAGGGGGTCTAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY440767       <-- GTACGCTCAGATTCTGGTTTTTCTTCAAATCCGGAAAAGGGGGTCTAGGT  Raphanus sativus cv GSK3-1
FY438454       <-- GTACGCTCAGATTCTGGTTTTTCTTCAAATCCGGAAAAGGGGGTCTAGGT  Raphanus sativus cv GSK3-1
FY445934       <-- GTACGCTCAGATTCTGGTTTTTCTTCAAATCCGGAAAAGGGGGTCTAGGT  Raphanus sativus cv GSK3-1
EX890379       <-- GTACACTCAGATTCTGGTTTTTCTTCAAATCCGGGAAAGGGGGTCTAGGT  Raphanus sativus var. oleiformis
FD947110       <-- GTACACTCAGATTCTGGTTTTTCTTCAAATCCGGGAAAGGGGGTCTAGGT  Raphanus sativus cv Early Scarlet Globe
EX764001       <-- GTACACTCAGATTCTGGTTTTTCTTCAAATCCGGGAAAGGGGGTCTAGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768006       --> GTACACTCAGATTCTGGTTTTTCTTCAAATCCGGGAAAGGGGGTCTAGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD943111       --> GTACACTCAGATTCTGGTTTTTCTTCAAATCCGGGAAAGGGGGTCTAGGT  Raphanus sativus cv Early Scarlet Globe

               351    -    401
UN08950        --> TTGAACGGAGAAGACTCTACGTCGGCGGAGGTGGCTGAGGGATGACCGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY440767       <-- TTGAACGGAGAGGACTCTACGTCGGCGGAGGTGGCTGAGGGATGACCGGA  Raphanus sativus cv GSK3-1
FY438454       <-- TTGAACGGAGAGGACTCTACGTCGGCGGAGGTGGCTGAGGGATGACCGGA  Raphanus sativus cv GSK3-1
FY445934       <-- TTGAACGGAGAGGACTCTACGTCGGCGGAGGTGGCTGAGGGATGACCGGA  Raphanus sativus cv GSK3-1
EX890379       <-- TTGAACGGAGAAGACTCTACGTCGGCGGAGGTGGCTGAGGGATGACCGGA  Raphanus sativus var. oleiformis
FD947110       <-- TTGAACGGAGAAGACTCTACGTCGGCGGAGGTGGCTGAGGGATGACCGGA  Raphanus sativus cv Early Scarlet Globe
EX764001       <-- TTGAACGGAGAAGACTCTACGTCGGCGGAGGTGGCTGAGGGATGACCGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768006       --> TTGAACGGAGAAGACTCTACGTCGGCGGAGGTGGCTGAGGGATGACCGGA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD943111       --> TTGAACGGAGAAGACTCTACGTCGGCGGAGGTGGCTGAAGGATGACCGGA  Raphanus sativus cv Early Scarlet Globe

               401    -    451
UN08950        --> GGCATTGGCCAAAGAGCGGCGGAGAGAGCGATGTTTGTCCCAATGGTAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY440767       <-- GGCATTGGCCAAAGAGCGGCGGAGAGAGCGATGTTTGTCCCAATGGTAAC
FY438454       <-- GGCATTGGCCAAAGAGCGGCGGAGAGAGCGATGTTTGTCCCAATGGTAAC
FY445934       <-- GGCATTGGCCAAAGAGCGGCGGAGAGAGCGATGTTTGTCCCAATGGTAAC
EX890379       <-- GGCATTGGCCAAAGAGCGGCGGAGAGAGCGATGTTTGTCCCAATGGTAAC
FD947110       <-- GGCATTGGCCAAAGAGCGGCGGAGAGAGCGATGTTTGTCCCAATGGTAAC
EX764001       <-- GGCATTGGCCAAAGAGCGGCGGAGAGAGCGATGTTTGTCCCAATGGTAAC
EX768006       --> GGCATTGGCCAAAGAGCGGCGGAAAGAGCGATGTTTGTCCCAATGGTAAC
FD943111       --> GGCATTGGCCAAAGAGCGGCGGAGAGAGCGATGTTTGTCCCAATGGTAAC

               451    -    501
UN08950        --> AGCAAGAGAATATTCCGGAGAGACTGAAAATGATTATGAGAAGCAGAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY440767       <-- AGCAAGAGAATATTCCGGAGAGACTGAAAATGATTATGAGAAGCAGAGCT
FY438454       <-- AGCAAGAGAATATTCCGGAGAGACTGAAAATGATTATGAGAAGCAGAGCT
FY445934       <-- AGCAAGAGAATATTCCGGAGAGACTGAAAATGATTATGAGAAGCAGAGCT
EX890379       <-- AGCAAGAGAATATTCCGGAGAGACTGAAAATGATTATGAGAAGCAGAGCT
FD947110       <-- AGCAAGAGAATATTCCGGAGAGACTGAAAATGATTATGAGAAGCAGAGCT
EX764001       <-- AGCAAGAGAATATTCCGGAGAGACTGAAAATGATTATGAGAAGCAGAGCT
EX768006       --> AGCAAGAGAATATTCCGGAGAGACTGAAAATGATTATGAGAAGCAGAGCT
FD943111       --> AGCAAGAGAATATTCCGGAGAGACTGAAAA....................

               501    -    551
UN08950        --> GTGCCTAGAGGGAATCCCAGTGACGGCCGAGAAGCATCCATGTGGGGCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY440767       <-- GTGCCTAGAGGGAATCCCAGTGACGGCCGAGAAGCATCCATGTGGGGCGG
FY438454       <-- GTGCCTAGAGGGAATCCCAGTGACGGCCGAGAAGCATCCATGTGGGGCGG
FY445934       <-- GTGCCTAGAGGGAATCCCAGTGACGGCCGAGAAGCATCCATGTGGGGCGG
EX890379       <-- GTGCCTAGAGGGAATCCCAGTGACGGCAGAGAAGCATCCATGTGGGGCGG
FD947110       <-- GTGCCTAGAGGGAATCCCAGTGACGGCCGAGAAGCATCCATGTGGGGCGG
EX764001       <-- GTGCCTAGAGGGAATCCCAGTGACGGCCGAGAAGCATCCATGTGGGGCGG
EX768006       --> GTGCCTAGAGGGAATCCCAGTGACGGCCGAGAAGCATCCATGTGGGGCGG
FD943111       --> ..................................................

               551    -    601
UN08950        --> CGAGAAATCTTGAGTGTTCTCCATCTACGGTGGCGATATAATCAACTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY440767       <-- CGAGAAATCTTGAGTGTTCTCCATGTACGGTTGCGATATAATCAACTGCT  Raphanus sativus cv GSK3-1
FY438454       <-- CGAGAAATCTTGAGTGTTCTCCATGTACGGTTGCGATATAATCAACTGCT  Raphanus sativus cv GSK3-1
FY445934       <-- CGAGAAATCTTGAGTGTTCTCCATGTACGGTTGCGATATAATCAACTGCT  Raphanus sativus cv GSK3-1
EX890379       <-- CGAGAAATCTTGAGTGTTCTCCATCTACGGTGGCGATATAATCAACTGCT  Raphanus sativus var. oleiformis
FD947110       <-- CGAGAAATCTTGAGTGTTCTCCATCTACGGTGGCGATATAATCAACTGCT  Raphanus sativus cv Early Scarlet Globe
EX764001       <-- CGAGAAATCTTGAGTGTTCTCCATCTACGGTGGCGATATAATCAACTGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768006       --> CGAGAAATCTTGAGTGTTCTCCATCTACGGTGGCGATATAATCAACTGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD943111       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               601    -    651
UN08950        --> GAGATGGTGAGATGGTTCTCTTCGATCATGTGTTTGAGACAAAAACAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY440767       <-- GAGATGGCGAGATGGTTCTCTTCGATCATGTGTTTGAGAC..........  Raphanus sativus cv GSK3-1
FY438454       <-- GAGATGGCGAGATGGTTCTCTTCGATCATGTGTTTGAGAC..........  Raphanus sativus cv GSK3-1
FY445934       <-- GAGATGGCGAGATGGTTCTCTTCGATCATGTGTTTGAGAC..........  Raphanus sativus cv GSK3-1
EX890379       <-- GAGATGGTGAGATGGTTCTCTTCGATCATGTGTTTGAGACAAAAACAGAG  Raphanus sativus var. oleiformis
FD947110       <-- GAGATGGTGAGATGGTTCTCTTCGATCATGTGTTTGAGACAAAAACAGAG  Raphanus sativus cv Early Scarlet Globe
EX764001       <-- GAGATGGTGAGATGGTTCTCTTCGATCATGTGTTTGAGACAAAAACAGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX768006       --> GAGATGGTGAGATGGTTCTCTTCGATCATGTGTTTGAGACAAAAACAGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD943111       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               651    -    701
UN08950        --> AGAAGAGAGAGAGAGAGAGAGTTTGTGAGCTTGGAGGGGACAAGGGACCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY440767       <-- ..................................................
FY438454       <-- ..................................................
FY445934       <-- ..................................................
EX890379       <-- AGAAGAGAGAGAGAGtttgtgagcttggagaggaccc.............
FD947110       <-- AGAAGAGAGA------GAGAGTTTGTGAGCTTGGAGGGGACAAGGGACCC
EX764001       <-- AGAAGAGAGAGAGAGAGAGAGTTTGTGAGCTTGGAGAGGACAAGGGACCC
EX768006       --> AGAAGAGAGAGAGAGAGAGAGTTTG.........................
FD943111       --> ..................................................