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Alignment for radish unigene UN08976

               1      -     51
UN08976        --> ATCAAAGTGCGATGTAAGTGGTGAACAAGATGATGATATCAGCAAAACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547003       <-- ATCAAAGTGCGATGTAAGTGGTGAACAAGATGATGATATCAGCAAAACAA
EX773692       <-- ..................................................
FD980097       <-- ..................................................
EV548222       <-- ..................................................
EV552003       --> ATCAAAGTGCGATGTAAGTGGTGAACAAGATGATGATATCAGCAAAACAA
EX777522       --> ..................................................
EW737142       --> ..................................................
EW730423       --> ..................................................
FD976039       --> ..................................................
EV543939       --> ..................................................

               51     -    101
UN08976        --> CAGTTATATATTCGAGACAAAAAGAAGAGGGAGATGAGTATACATTTTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547003       <-- CAGTTATATATTCGAGACAAAAAGAAGAGGGAGATGAGTATACATTTTAC
EX773692       <-- ..................................................
FD980097       <-- ..................................................
EV548222       <-- ..................................................
EV552003       --> CAGTTATATATTCGAGACAAAAAGAAGAGGGAGATGAGTATACATTTTAC
EX777522       --> ..................................................
EW737142       --> ..................................................
EW730423       --> ..................................................
FD976039       --> ..................................................
EV543939       --> ..................................................

               101    -    151
UN08976        --> TTGACCAGGCAATTGAAAATTTATTTGTAATCGTTTTATTTTCCAAGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547003       <-- TTGACCAGGCAATTGAAAATTTATTTGTAATCGTTTTATTTTCCAAGTGT
EX773692       <-- ..................................................
FD980097       <-- ..................................................
EV548222       <-- ..................................................
EV552003       --> TTGACCAGGCAATTGAAAATTTATTTGTAATCGTTTTATTTTCCAAGTGT
EX777522       --> ..................................................
EW737142       --> ..................................................
EW730423       --> ..................................................
FD976039       --> ..................................................
EV543939       --> ..................................................

               151    -    201
UN08976        --> TGTCTATAATCTACTGGTAAGTTTCTTTAGTTGGCCCGATCAGATGTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547003       <-- TGTCTATAATCTACTGGTAAGTTTCTTTAGTTGGCCCGATCAGATGTCCA
EX773692       <-- ..................................................
FD980097       <-- ..................................................
EV548222       <-- ..................................................
EV552003       --> TGTCTATAATCTACTGGTAAGTTTCTTTAGTTGGCCCGATCAGATGTCCA
EX777522       --> ..................................................
EW737142       --> ..................................................
EW730423       --> ..................................................
FD976039       --> ..................................................
EV543939       --> ..................................................

               201    -    251
UN08976        --> ACTGTTCCCACACATGAAAGAAAAGAACATGACATACAATAAGCGTTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547003       <-- ACTGTTCCCACACATGAAAGAAAAGAACATGACATACAATAAGCGTTTGT
EX773692       <-- ..................................................
FD980097       <-- ..................................................
EV548222       <-- ..................................................
EV552003       --> ACTGTTCCCACACATGAAAGAAAAGAACATGACATACAATAAGCGTTTGT
EX777522       --> ..................................................
EW737142       --> ..................................................
EW730423       --> ..................................................
FD976039       --> ..................................................
EV543939       --> ..................................................

               251    -    301
UN08976        --> CCTCGTGACAATCTGGCTGCCTTTATACGTCACCCATTTTTATTCTAATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547003       <-- CCTCGTGACAATCTGGCTGCCTTTATACGTCACCCATTTTTATTCTAATC
EX773692       <-- ..................................................
FD980097       <-- ..................................................
EV548222       <-- ..................................................
EV552003       --> CCTCGTGACAATCTGGCTGCCTTTATACGTCACCCATTTTTATTCTAATC
EX777522       --> ............................................CTAATC
EW737142       --> ..................................................
EW730423       --> ..................................................
FD976039       --> ..................................................
EV543939       --> ..................................................

               301    -    351
UN08976        --> ATGTTTTATTAGCACCATGATGATATTTATAAATTCGTAAACGTTTCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547003       <-- ATGTTTTATTAGCACCATGATGATATTTATAAATTCGTAAACGTTTCAAA
EX773692       <-- ..................................................
FD980097       <-- ..................................................
EV548222       <-- ..................................................
EV552003       --> ATGTTTTATTAGCACCATGATGATATTTATAAATTCGTAAACGTTTCAAA
EX777522       --> ATGTTTTATTAGCACCATGATGATATTTATAAATTCGTAAACGTTTCAAA
EW737142       --> ...................................CGTAAGCGTTTCAAA
EW730423       --> ..................................................
FD976039       --> ..................................................
EV543939       --> ..................................................

               351    -    401
UN08976        --> TTTTTGGATACTAGGATAATTGCTTTGGTACATTGCCACATATATCCGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547003       <-- TTTTTGGATACTAGGATAATTGCTTTGGTACATTGCCACATATATCCGTT
EX773692       <-- ..................................................
FD980097       <-- ..................................................
EV548222       <-- ..................................................
EV552003       --> TTTTTGGATACTAGGATAATTGCTTTGGTACATTGCCACATATATCCGTT
EX777522       --> TTTTTGGATACTAGGATAATTGCTTTGGTACATTGCCACATATATCCGTT
EW737142       --> TTTTTGGATACTAGGATAATTGCTTTGGTACATTGCCACATATATCCGTT
EW730423       --> ..TTTGGATACTAGGATAATTGCTTTGGTACATTGCAACATATATCCGTT
FD976039       --> ..................................................
EV543939       --> ..................................................

               401    -    451
UN08976        --> TTCCTACTCCAACAGAGATCAATCAAAACACAAAGTGATCTGTGCACAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547003       <-- TTCCTACTCCAACAGAGATCAATCAAAACACAAAGTGATCTGTGCACAAC
EX773692       <-- ..................................................
FD980097       <-- ..................................................
EV548222       <-- ..................................................
EV552003       --> TTCCTACTCCAACAGAGATCAATCAAAACACAAAGTGATCTGTGCACAAC
EX777522       --> TTCCTACTCCAACAGAGATCAATCAAAACACAAAGTGATCTGTGCACAAC
EW737142       --> TTCCTACTCCAACAGAGATCAATCAAAACACAAAGTGATCTGTGCACAAC
EW730423       --> TTCCTACTCCAACAGAGATCAATCAAAACACAAAGTGATCTGTGCACAAC
FD976039       --> ..................................................
EV543939       --> ..................................................

               451    -    501
UN08976        --> AAACTCAACTATCCTTATGATATTCCACAAAAAAAAAAAAAAAATGAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547003       <-- AAACTCAACTATCCTTATGATATTCCAC......................
EX773692       <-- ..................................................
FD980097       <-- ..................................................
EV548222       <-- ..................................................
EV552003       --> AAACTCAACTATCCTTATGATATTCCAC......................
EX777522       --> AAACTCAACTATCCTTATGATATTCCACAAAAAAAAAAAAAAAA----AA
EW737142       --> AAACTCAACTATCCTTATGATATTCCACAAAAAAAAAAAAAAA-TGAAAA
EW730423       --> AAACTCAACTATCCTTATGATATTCCACAAAAAAAAAAAAAAAATGAAAA
FD976039       --> ..................................................
EV543939       --> ..................................................

               501    -    551
UN08976        --> TGCGTTCTTCCATTTTTAACCAATCGACTCTGCTTATCCCCTCTTTCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547003       <-- ..................................................
EX773692       <-- ..................ACCAATCGACTCTGCT-ATCCCCTCTTTCAAG
FD980097       <-- ..................................................
EV548222       <-- ..................................................
EV552003       --> ..................................................
EX777522       --> TGCGTTCTTCCATTTTTAACCAATCGACTCTGCTTATCCCCTCTTTCAAG
EW737142       --> TGCGTTCTTCCATTTTTAACCAATCGACTCTGCTTATCCCCTCTTTCAAG
EW730423       --> TGCGTTCTTCCATTTTTAACCAATCGACTCTGCTTATCCCCTCTTTCAAG
FD976039       --> ..................................................
EV543939       --> ..................................................

               551    -    601
UN08976        --> GGGGGGATGTGTTACTCTATATAGCAAGGTCCTTCAGACCAAGTCTTTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547003       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX773692       <-- GTGGGGATGTGT-ACTCTATATAGCAAG-T-CTTCAGACCAAGTCTTTAA  Raphanus raphanistrum subsp. landra
FD980097       <-- ...............taTATATAGTAAGGTCCTTCAGACCAAGTCTTTAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548222       <-- ................................................AA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV552003       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777522       --> GGGGGGATGTGTTACTCTATATAGCAAG-TCCTTCAGACCAAGTCTTTAA  Raphanus raphanistrum subsp. landra
EW737142       --> GGGGGGATGTGTTACTCTATATAGCAAG-TCCTTCAAACCAAGTCTTTAA  Raphanus sativus cv Rat-Tail Radish #3870
EW730423       --> GGGGGGATGTGTTACTCTATATAGCAAG-TCCTTCAGACCAAGTCTTTAA  Raphanus sativus cv Early Scarlet Globe
FD976039       --> ......ATGTGTTACTATATATAGTAAGGTCCTTCAGACCAAGTCTTTAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV543939       --> ............TACTATATATAGTAAGGTCCTTCAGACCAAGTCTTTAA  Raphanus raphanistrum subsp. raphanistrum (NY)

               601    -    651
UN08976        --> ATGAGTTTCTTCTTGTGGAAGTATCGCTTCAGGTACCATATCTGTGAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547003       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX773692       <-- ATGAGTTTCTTCTTGTGGAAATATCGCTTCAGGTACCATATCTGTGAACC  Raphanus raphanistrum subsp. landra
FD980097       <-- ATGAGTTTCTTCTTGCGGAAGTATCGCTTCAGGTACCATATCTGTGAACC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548222       <-- ATGAGTTTCTTCTTGTGGAAGTATCGCTTCAGGTACCATATCTGTGAACC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV552003       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777522       --> ATGAGTTTCTTCTTGTGGAAATATCGCTTCAGGTACCATATCTGTGAACC  Raphanus raphanistrum subsp. landra
EW737142       --> ATGAGTTTCTTCTTGTGGAAATATCGCTTCAGGTACCATATCTGTGAACC  Raphanus sativus cv Rat-Tail Radish #3870
EW730423       --> ATGAGTTTCTTCTTGTGGAAATATCGCTTCAGGTACCATATCTGTGAACC  Raphanus sativus cv Early Scarlet Globe
FD976039       --> ATGAGTTTCTTCTTGCGGAAGTATCGCTTCAGGTACCATATCTGTGAACC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV543939       --> ATGAGTTTCTTCTTGTGGAAGTATCGCTTCAGGTACCATATCTGTGAACC  Raphanus raphanistrum subsp. raphanistrum (NY)

               651    -    701
UN08976        --> CGCAACAGAAAGGCAAACCCCGAGTGACATTATACTGAACCAAGCCACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547003       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX773692       <-- C---GCGGAAAGGCAAACCCCGAGTGACATTATACTGAACCAAGCCACTC  Raphanus raphanistrum subsp. landra
FD980097       <-- CGCAACAGAAAGGCAAACCCCGAGTGACATTATACTGAACCAAGCCACTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548222       <-- CGCAACAGAAAGGCAAACCCCGAGTGACATTATACTGAACCAAGCCACTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV552003       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX777522       --> CGC---GGAAAGGCAAACCCCGAGTGACATTATACTGAACCAAGCCACTC  Raphanus raphanistrum subsp. landra
EW737142       --> CGCAACGGAAAGGCAAACCCCGAGTGACATTATACTGAACCAAGCCACTC  Raphanus sativus cv Rat-Tail Radish #3870
EW730423       --> CGCAACGGAAAGGCAAACCCCGAGTGACATTATACTGAACCAAGCCACTC  Raphanus sativus cv Early Scarlet Globe
FD976039       --> CGCAACAGAAAGGCAAACCCCGAGTGACATTATACTGAACCAAGCCACTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV543939       --> CGCAACAGAAAGGCAAACCCCGAGTGACATTATACTGAACCAAGCCACTC  Raphanus raphanistrum subsp. raphanistrum (NY)

               701    -    751
UN08976        --> TCGAGTTGGTTGTCTCACTCACTTCTCTCATCTCGGCTTCCCTGTCTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547003       <-- ..................................................
EX773692       <-- TCGAGTTGGTTGTCTCACTCACTTCTCTCATCTCGGCTTCCCTGTCTTTT
FD980097       <-- TCGAGTTGGTTGTCTCACTCACTTCTCTCATCTCGGCTTCCCTGTCTTTT
EV548222       <-- TCGAGTTGGTTGTCTCACTCACTTCTCTCATCTCGGCTTCCCTGTCTTTT
EV552003       --> ..................................................
EX777522       --> TCGAGTTGGTTGTCTCACTCACTTCTCTCATCTCGGCTTCCCTGTCTTTT
EW737142       --> TCGAGTTGGTTGTCTCACTCACTTCTCTCATCTCGGCTTCCCTGTCTTTT
EW730423       --> TCGAGTTGGTTGTCTCACTCACTTCTCTCATCTCGGCTTCCCTGTCTTTT
FD976039       --> TCGAGTTGGTTGTCTCACTCACTTCTCTCATCTCGGCTTCCCTGTCTTTT
EV543939       --> TCGAGTTGGTTGTCTCACTCACTTCTCTCATCTCGGCTTCCCTGTCTTTT

               751    -    801
UN08976        --> ATATAATTGATGTTCTCACGAATCGACTGCACTAACCCGTCAAGTCTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547003       <-- ..................................................
EX773692       <-- ATATAATTGATGTTCTCACGAATCGACTGCACTAACCCGTCAAGTCTCCT
FD980097       <-- ATATAATTGATGTTCTCACGAATCGACTGCACTAACCCGTCAAGTCTCCT
EV548222       <-- ATATAATTGATGTTCTCACGAATCGACTGCACTAACCCGTCAAGTCTCC-
EV552003       --> ..................................................
EX777522       --> ATATAATTGATGTTCTCACGAATCGACTGCACTAACCCGTCAAGTCTCCT
EW737142       --> ATATAATTGATGTTCTCACGAATCGACTGCACTAACCCGTCAAGTCTCCT
EW730423       --> ATATAATTGATGTTCTCACGAATCGACTGCACTAACCCGTCAAGTCTCCT
FD976039       --> ATATAATTGATGTTCTCACGAATCGACTGCACTAACCCGTCAAGTCTCCT
EV543939       --> ATATAATTGATGTTCTCACGAATCGACTGCACTAACCCGTCAAGTCTCC-

               801    -    851
UN08976        --> CAACTGAAGCTCAACACCCTCGATCTTTTCCTTTTTAGCAACAGAGTCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547003       <-- ..................................................
EX773692       <-- CAACTGAAGCTCAACACCCTCGATCTTTTCCTTTTTAGCAACAGAGTCCC
FD980097       <-- CAACTGAAGCTCAACACCCTCGATCTTTTCCTTTTTAGCAACAGAGTCCC
EV548222       <-- CAACTGAAGCTCAACACCCTCGATCTTTTCCTTTTTAGCAACAGAGTCCC
EV552003       --> ..................................................
EX777522       --> CAACTGAAGCTCAACACCCTCGATCTTTTCCTTTTTAGCAACAGAGTCCC
EW737142       --> CAACTGAAGCTCAACACCCTCGATCTTTTCCTTTTTAGCAACAGAGTCCC
EW730423       --> CAACTGAAGCTCAACACCCTCGATCTTTTCCTTTTTAGCAACAGAGTCCC
FD976039       --> CAACTGAAGCTCAACACCCTCGATCTTTTCCTTTTTAGCAACAGAGTCCC
EV543939       --> CAACTGAAGCTCAACACCCTCGATCTTTTCCTTTTTAGCAACAGAGTCCC

               851    -    901
UN08976        --> AATCTTTAGCTGCGATACCAATCTTCCAATCAATCCCAAGAGTCAGTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547003       <-- ..................................................
EX773692       <-- AATCTTTAGCTGCGATACCAATCTTCCAATCAATCCCAAGAGTCAGTGGA
FD980097       <-- AATCTTTAGCTGCGATACCAATCTTCCAATCAATCCCAAGAGTCAGTGGA
EV548222       <-- AATCTTTAGCCGCGATACCAATCTTCCAATCAATCCCAAGAGTCAGTGGA
EV552003       --> ..................................................
EX777522       --> AATCTTTAGCTGCGATACCAATCTTCCAATCAATCCCAAGAGTCAGTGGA
EW737142       --> AATCTTTAGCTGCGATACCAATCTTCCAATCAATCCCAAGAGTCAGTGGA
EW730423       --> AATCTTTAGCTGCGATACCAATCTTCCAATCAATCCCAAGAGTCAGTGGA
FD976039       --> AATCTTTAGCTGCGATACCAATCTTCCAATCAATCCCAAGAGTCAGTGGA
EV543939       --> AATCTTTAGCCGCGATACCAATCTTCCAATCAATCCCAAGAGTCAGTGGA

               901    -    951
UN08976        --> TTAACTTGCGGACGACTGGAATCAACCCAGAAGCAAGCCAAGTAATTCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547003       <-- ..................................................
EX773692       <-- TTAACTTGCGGACGACTGGAATCAACCCAGAAGCAAGCCAAGTAATTCCC
FD980097       <-- TTAACTTGCGGACGACTGGAATCAACCCAGAAGCAAGCCAAGTAATTCCC
EV548222       <-- TCAACTTGCGGACGACTGGAATCAACCCAGAAGCAAGCCAAGTAATTCCC
EV552003       --> ..................................................
EX777522       --> TTAACTTGCGGACGACTGGAATCAACC.......................
EW737142       --> TTAACTTGCGGACGACTGGAATCAACC.......................
EW730423       --> TTAACTTGCGGACGACTGGAATCAACCCAGAAGCAAGCCAAGTAATTCCC
FD976039       --> TTAACTTGCGGACGACTGGAATCAACCCAGAAGCAAGCCAAGTAATTCCC
EV543939       --> TCAACTTGCGGACGACTGGAATCAACCCAGAAGCAAGCCAAGTAATTCCC

               951    -   1001
UN08976        --> AGTTTCTTGAGTTGTGAAGGCAAACTGACCATGCGTCACATTGTCTTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547003       <-- ..................................................
EX773692       <-- AGTTTCTTGAGTTGTGAACGCAAACTGACCATGCGTCACATTGTCTTGGT
FD980097       <-- AGTTTCTTGAGTTGTGAAGGCAAACTGACCATGCGTCACATTGTCTTGGT
EV548222       <-- AGTTTCTTGAGTTGTGAAGGCAAACTGACCATGCGTCACATTGTCTTGGT
EV552003       --> ..................................................
EX777522       --> ..................................................
EW737142       --> ..................................................
EW730423       --> AGTTTCTTGAGTTGTGAACGCAAACTGACCATGCGTCACATTGTCTTGGT
FD976039       --> AGTTTCTTGAGTTGTGAAGGCAAACTGACCATGCGTCACATTGTCTTGGT
EV543939       --> AGTTTCTTGAGTTGTGAAGGCAAACTGACCATGCGTCACATTGTCTTGGT

               1001   -   1051
UN08976        --> GATGCAGATTGTTCCCATAAGGAGATGTTACCTTAGAAGAAATAGTAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547003       <-- ..................................................
EX773692       <-- GATGCAGATTGTTCCCATAAGGAGATGTTACCTTAGAAGAAATAGTAGCC
FD980097       <-- GATGCAGATTGTTCCCATAAGGAGATGTTACCTTAGAAGAAATAGTAGCC
EV548222       <-- GATGCAGATTGTTCCCATAAGGAGATGTTACCTTAGAAGAAATAGTAGCC
EV552003       --> ..................................................
EX777522       --> ..................................................
EW737142       --> ..................................................
EW730423       --> GATGCAGATTGTTCCCATAAGGAGATGTTACCTTAGAAGAAATAGTAGCC
FD976039       --> GATGCAGATTGTTCCCATAAGGAGATGTTACCTTAGAAGAAATAGTAGCC
EV543939       --> GATGCAGATTGTTCCCATAAGGAGATGTTACCTTAGAAGAAATAGTAGCC

               1051   -   1101
UN08976        --> GTGTGTTCAGGATCATGCTCATCGACGACGTAGTAATCAGCCAAAACGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547003       <-- ..................................................
EX773692       <-- GTGTGTTCAGGATCATGCTCATCGACGACGTAGTAATCAGCCAAGACGAC
FD980097       <-- GTGTGTTCAGGATCATGCTCATCGACGACGTAGTAATCAGCCAAAACGAC
EV548222       <-- GTGTGTTCAGGATCATGCTCATCGACGACGTAGTAATCAGCCAAAACGAC
EV552003       --> ..................................................
EX777522       --> ..................................................
EW737142       --> ..................................................
EW730423       --> GTGTGT............................................
FD976039       --> GTGTGTTCAGGATCATGCTCATCGACGACGTAGTAATCAGCCAAAACGAC
EV543939       --> GTGTGTTCAGGATCATGCTCATCGACGACGTAGTAATCAGCCAAAACGAC

               1101   -   1151
UN08976        --> GACGTTGCTCTGTATCTCCTCCGAGACGCACTTAGTCCCTCCCGTCGGCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547003       <-- ..................................................
EX773692       <-- GACGTTGCTCTGTATCTCCTCGGAGACGCACTTCGTCCCTCCCGTCGGCG
FD980097       <-- GACGTTGCTCTGTATCTCCTCCGAGACGCACTTAGTCCCTCCCGTCGGCG
EV548222       <-- GACGTTGCTCTGTATCTCCTCCGAGACGCACTTAGTCCCTCCCGTCGGCG
EV552003       --> ..................................................
EX777522       --> ..................................................
EW737142       --> ..................................................
EW730423       --> ..................................................
FD976039       --> GACGTTGCTCTGTATCTCCTCCGAGACGCACTTAGTCCCTCCCGTCGGCG
EV543939       --> GACGTTGCTCTGTATCTCCTCCGAGACGCACTTAGTCCCTCCCGTCGGCG

               1151   -   1201
UN08976        --> GAATCGTCAACCATATGGCTTCGCCGTGGTTAACCGTCAGCAGGAACAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547003       <-- ..................................................
EX773692       <-- GAATCGTCAACCATATGGCTTCGCCGTGGTTAACCGTCAGCAGGAACAGC
FD980097       <-- GAATCGTCAACCATATGGCTTCGCCGTGGTTAACCGTCAGCAGGAACAGC
EV548222       <-- GAATCGTCAACCATATGGCTTCGCCGTGGTTAACCGTCAGCAGGAACAGC
EV552003       --> ..................................................
EX777522       --> ..................................................
EW737142       --> ..................................................
EW730423       --> ..................................................
FD976039       --> GAATCGTCAACCATATGGCTTCGCCGTGGTTAACCGTCA...........
EV543939       --> GAATCGTCAACCATATGGCTTCGCCGTGGTTAACCGTCAGCAG-AACAGC

               1201   -   1251
UN08976        --> ACCGCCGCCAGAATCGGCGAGAAAGCGACGAGTCCTCCTCT--AATCGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547003       <-- ..................................................
EX773692       <-- ACCGCCGCCAGAATCGGCGAGAAAGCAACGAGTCTTCCTCTCTAATCGAC
FD980097       <-- ACCGCCGCCAGAATCGGCGAGAAAGCGACGAGTCCTCCTCT--AATCGAC
EV548222       <-- ACCGCCGCCAGAATCGGCGAGAAAGCGACGAGTCCTCCTCT--AATCGAC
EV552003       --> ..................................................
EX777522       --> ..................................................
EW737142       --> ..................................................
EW730423       --> ..................................................
FD976039       --> ..................................................
EV543939       --> ACCGCCcc..........................................

               1251   -   1301
UN08976        --> ATCGTGAGAGTTTACGACGATCTTCTTCTTCTTCTCTTTTATTACCTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547003       <-- ..................................................
EX773692       <-- ATCGTGAGAGTTTACGAAGATCTTCTTCTTCTTCcc..............
FD980097       <-- ATCGTGAGAGTTTACGA.................................
EV548222       <-- ATCGTGAGAGTTTACGACGATCTTCTTCTTCTTCTCTTTTATTACCTCTC
EV552003       --> ..................................................
EX777522       --> ..................................................
EW737142       --> ..................................................
EW730423       --> ..................................................
FD976039       --> ..................................................
EV543939       --> ..................................................

               1301   -   1351
UN08976        --> GAAGTCCAATTAAACTCAAGGACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~
EV547003       <-- ........................
EX773692       <-- ........................
FD980097       <-- ........................
EV548222       <-- GAAGTCCAATTAAACTCAAGGACC
EV552003       --> ........................
EX777522       --> ........................
EW737142       --> ........................
EW730423       --> ........................
FD976039       --> ........................
EV543939       --> ........................